No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g33320 |
| malus_domestica | MD08G1087700.v1.1 MD15G1072600.v1.1 |
| prunus_persica | Prupe.1G425200_v2.0.a1 |
| pyrus_communis | pycom08g07150 |
| rosa_chinensis | RchiOBHm_Chr6g0309301 |
| rosa_laevigata | RLG00000010575 RLG00000029443 |
| rosa_multiflora | Rmu_sc0007504.1_g000003 Rmu_sc0007504.1_g000004 Rmu_sc0015692.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00159510 |
| rosa_rugosa | Rorug06G0370700 |
| rosa_samantha | Rh1DG111900 Rh3BG311700 Rh3BG334700 Rh4AG060200 Rh5BG475300 Rh5CG498900 Rh6AG131300 Rh6AG484200 Rh6BG493300 Rh6CG498100 Rh6DG484700 Rh7DG430900 |
| rosa_wichuraiana | Rw6G042150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 45 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 174 |
| AgsI | TTSAA | 2 cut(s) | 82, 181 |
| AluBI | AGCT | 1 cut(s) | 34 |
| AluI | AGCT | 1 cut(s) | 34 |
| AoxI | GGCC | 1 cut(s) | 45 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AsuII | TTCGAA | 1 cut(s) | 132 |
| BalI | TGGCCA | 1 cut(s) | 47 |
| BccI | CCATC | 1 cut(s) | 98 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| Bpu14I | TTCGAA | 1 cut(s) | 132 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 174 |
| Bse1I | ACTGG | 1 cut(s) | 192 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 174 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BseNI | ACTGG | 1 cut(s) | 192 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 174 |
| BsnI | GGCC | 1 cut(s) | 47 |
| Bsp119I | TTCGAA | 1 cut(s) | 132 |
| Bsp19I | CCATGG | 1 cut(s) | 48 |
| BspANI | GGCC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 135 |
| BspT104I | TTCGAA | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 192 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| Bst6I | CTCTTC | 2 cut(s) | 129, 147 |
| BstBI | TTCGAA | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 143 |
| BstDSI | CCRYGG | 1 cut(s) | 48 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BsuRI | GGCC | 1 cut(s) | 47 |
| BtgI | CCRYGG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 2 cut(s) | 94, 185 |
| CfoI | GCGC | 1 cut(s) | 7 |
| CviAII | CATG | 1 cut(s) | 49 |
| CviJI | RGCY | 3 cut(s) | 34, 47, 142 |
| CviKI_1 | RGCY | 3 cut(s) | 34, 47, 142 |
| DdeI | CTNAG | 1 cut(s) | 143 |
| EaeI | YGGCCR | 1 cut(s) | 45 |
| Eam1104I | CTCTTC | 2 cut(s) | 129, 147 |
| EarI | CTCTTC | 2 cut(s) | 129, 147 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| EcoRI | GAATTC | 1 cut(s) | 181 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 52 |
| FaiI | YATR | 3 cut(s) | 44, 50, 116 |
| FatI | CATG | 1 cut(s) | 48 |
| GlaI | GCGC | 1 cut(s) | 6 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 47 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 1 cut(s) | 52 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HinfI | GANTC | 3 cut(s) | 68, 108, 147 |
| Hpy188I | TCNGA | 1 cut(s) | 165 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 1 cut(s) | 167 |
| HpyCH4V | TGCA | 1 cut(s) | 127 |
| HpyF3I | CTNAG | 1 cut(s) | 143 |
| Hsp92II | CATG | 1 cut(s) | 52 |
| HspAI | GCGC | 1 cut(s) | 5 |
| LpnPI | CCDG | 2 cut(s) | 173, 181 |
| MboII | GAAGA | 3 cut(s) | 13, 146, 164 |
| MlsI | TGGCCA | 1 cut(s) | 47 |
| MluCI | AATT | 2 cut(s) | 128, 181 |
| MluNI | TGGCCA | 1 cut(s) | 47 |
| MlyI | GAGTC | 2 cut(s) | 117, 156 |
| MnlI | CCTC | 5 cut(s) | 23, 112, 115, 132, 148 |
| Mox20I | TGGCCA | 1 cut(s) | 47 |
| MscI | TGGCCA | 1 cut(s) | 47 |
| MslI | CAYNNNNRTG | 1 cut(s) | 41 |
| Msp20I | TGGCCA | 1 cut(s) | 47 |
| NcoI | CCATGG | 1 cut(s) | 48 |
| NlaIII | CATG | 1 cut(s) | 52 |
| NspV | TTCGAA | 1 cut(s) | 132 |
| PfeI | GAWTC | 1 cut(s) | 68 |
| PleI | GAGTC | 2 cut(s) | 116, 155 |
| PpsI | GAGTC | 2 cut(s) | 116, 155 |
| RseI | CAYNNNNRTG | 1 cut(s) | 41 |
| SchI | GAGTC | 2 cut(s) | 117, 156 |
| SetI | ASST | 3 cut(s) | 36, 126, 159 |
| SfuI | TTCGAA | 1 cut(s) | 132 |
| SgeI | CNNG | 4 cut(s) | 43, 61, 71, 180 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 41 |
| Sse9I | AATT | 2 cut(s) | 128, 181 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TaqI | TCGA | 3 cut(s) | 74, 132, 150 |
| TasI | AATT | 2 cut(s) | 128, 181 |
| TfiI | GAWTC | 1 cut(s) | 68 |
| TscAI | CASTG | 2 cut(s) | 94, 192 |
| TspRI | CASTG | 2 cut(s) | 94, 192 |
| XapI | RAATTY | 1 cut(s) | 181 |