pycom08g07150

acyl-CoA-binding domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
5755963 .. 5759162
3200 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g07150.2

Sequence Viewer

Length: 1248 bp
ATGGACCTCTTTCAGGACCTGTTTCTGACGGCGTCGCTGGCTCTGATCCTCTCTTTTCTCGTCGCCAAGCTCGTCGCCGTGGCGGTTGCTGGCCGCGAGTCGGAGGCGGAGCTCGGGGAGGGTGGGAATGGCGGCGGTGAAGGAGTTGGTGTGGAGGAGGTGAGCTTCGAGGAGAGGAGGCTGAAAGTGGAAGGGCCTTTTCGCGGTCAGAGTCAGAGGAGGGTAGAGCTTGAAGGAGAAGTGAAGGATGTCGTTCGTTTCGAAGGGGAAGCGGTTCATCAGGCTGAGGAGATTGCGGAGCCGCTGCAGCAGCATCGACAAGGTCGTGGATTGACGGAGGAGATGTTGGAGGAAGAGTCGGTGGCGGTTGTATTGCCGGAGAAGTGGTCAGCGGCGGTAGGATTGCTGGAGAAATGGTCGGATGGCGGGGAATTCGAAGGGGAAGCGGTTCATCGGGCTCAGGAGGTTGCGGAGCCGCTGCAGCAGCATCGAGAAGGTCGTGGATTGACGGAGGAGGAGTCGGTGGCGGTTGTATTGCCGGAGAAGTCGTCAGTGGCGGTAGGATTGCCGGAGAAGTGGTCAGATGGCGGGGAATTTGAAGAGGAAGCGGTTCATCGGGGTGAGGTGATTGTGGAGCCACTGCAGCAGCATCGAGAAGGTTGTAGATTGACGGAGGAAGAGTTGGTGGAAGAGTCGGTGGTGGTTGTATTGCCGGAGAAGTCGTCAGTGGCGGTTGGATTGCCGGGGAAGCGGTCGGATGGCGGGGAAATGGAGAAAGCGAGCGAGTTCGATCGCGGAAGCTCGGAAAACAGAGAAGCGGAAGAAATTGGCGCGAAGTCAGCAGGAAACGACGTCGTTGCCGAACAGTCGGAGGAGGTTAGGGTTGTGGATTGCGAGGAAACTAAGGAGAAGACACACGTGGCGCCAAGTGAGGTTAAATCGGGAGATTTCAGTGACGAGGATGATTGGGAGGGGATCGAGAAGAGGGTCGGCGAATGTCGGTGGCCATGTGCAGGTATCCAACGGCTCTCAACACTTGAGAGCGTGCCAAGTGGGGTGCAAGGGGAAGAGACTTTGATTTGTTTCCTAACAGAGTTGCAGCTTCGAAGACGGCAAAGTAAAGAGCTACAGAACAGAAGTAAGACATTTTATTTGGTTTTTCTTGCTTCTTGTCCCCATTGGCATGCTACATTGGAAAATAGTTATTCATCTTGCTCTAGTAAGATTAGGGAAGATTCATGGACCTAG

Protein Analysis

416

Amino Acids

45.81

Weight (kDa)

4.59

Isoelectric Point (pI)

64.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 855
Acc36I ACCTGC 1 cut(s) 1004
AccB1I GGYRCC 1 cut(s) 922
AccII CGCG 4 cut(s) 96, 204, 795, 833
AclWI GGATC 2 cut(s) 40, 983
AcoI YGGCCR 2 cut(s) 91, 1004
AcsI RAATTY 2 cut(s) 431, 593
AcvI CACGTG 1 cut(s) 919
AcyI GRCGYC 3 cut(s) 32, 852, 923
AfiI CCNNNNNNNGG 4 cut(s) 13, 100, 203, 1013
AflIII ACRYGT 1 cut(s) 916
AgsI TTSAA 2 cut(s) 233, 599
AluBI AGCT 7 cut(s) 70, 112, 165, 229, 801, 1102, 1126
AluI AGCT 7 cut(s) 70, 112, 165, 229, 801, 1102, 1126
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 1 cut(s) 1064
AlwI GGATC 2 cut(s) 40, 983
AlwNI CAGNNNCTG 1 cut(s) 19
Ama87I CYCGRG 1 cut(s) 113
AoxI GGCC 3 cut(s) 91, 194, 1004
ApeKI GCWGC 9 cut(s) 304, 307, 310, 478, 481, 484, 643, 646, 1099
ApoI RAATTY 2 cut(s) 431, 593
ArsI GACNNNNNNTTYG 2 cut(s) 1135, 1167
Asp700I GAANNNNTTC 3 cut(s) 273, 447, 609
AspLEI GCGC 2 cut(s) 833, 925
AspS9I GGNCC 4 cut(s) 4, 16, 194, 1242
AsuC2I CCSGG 1 cut(s) 744
AsuHPI GGTGA 4 cut(s) 149, 172, 632, 637
AsuII TTCGAA 3 cut(s) 261, 435, 1105
AvaI CYCGRG 1 cut(s) 113
AvaII GGWCC 3 cut(s) 4, 16, 1242
BalI TGGCCA 1 cut(s) 1006
BanI GGYRCC 1 cut(s) 922
BanII GRGCYC 2 cut(s) 114, 460
BbrPI CACGTG 1 cut(s) 919
BbsI GAAGAC 2 cut(s) 917, 1114
Bbv12I GWGCWC 1 cut(s) 114
BbvCI CCTCAGC 1 cut(s) 285
BbvI GCAGC 9 cut(s) 291, 319, 322, 465, 493, 496, 655, 658, 1111
BccI CCATC 3 cut(s) 416, 578, 752
BceAI ACGGC 4 cut(s) 45, 62, 1040, 1127
BcgI CGANNNNNNTGC 8 cut(s) 296, 330, 470, 504, 632, 666, 839, 873
BciVI GTATCC 1 cut(s) 1028
BcnI CCSGG 1 cut(s) 744
BcoDI GTCTC 1 cut(s) 1064
BfaI CTAG 2 cut(s) 1218, 1246
BfmI CTRYAG 4 cut(s) 305, 479, 641, 1127
BfoI RGCGCY 1 cut(s) 926
BfuAI ACCTGC 1 cut(s) 1004
BfuI GTATCC 1 cut(s) 1028
Bme1390I CCNGG 1 cut(s) 744
Bme18I GGWCC 3 cut(s) 4, 16, 1242
BmeT110I CYCGRG 1 cut(s) 113
BmgT120I GGNCC 4 cut(s) 4, 16, 194, 1242
BmiI GGNNCC 4 cut(s) 300, 474, 636, 924
BmrFI CCNGG 1 cut(s) 744
BmsI GCATC 3 cut(s) 322, 496, 658
BpiI GAAGAC 2 cut(s) 917, 1114
BpmI CTGGAG 1 cut(s) 428
Bpu10I CCTNAGC 2 cut(s) 285, 459
Bpu14I TTCGAA 3 cut(s) 261, 435, 1105
BpuEI CTTGAG 1 cut(s) 1058
BpuMI CCSGG 1 cut(s) 744
BsaAI YACGTR 1 cut(s) 919
BsaHI GRCGYC 3 cut(s) 32, 852, 923
BsaJI CCNNGG 2 cut(s) 78, 743
Bsc4I CCNNNNNNNGG 4 cut(s) 13, 100, 203, 1013
BseDI CCNNGG 2 cut(s) 78, 743
BseGI GGATG 4 cut(s) 253, 427, 763, 967
BseLI CCNNNNNNNGG 4 cut(s) 13, 100, 203, 1013
BseMII CTCAG 2 cut(s) 276, 473
BseRI GAGGAG 9 cut(s) 170, 185, 190, 232, 302, 353, 527, 530, 887
BseXI GCAGC 9 cut(s) 291, 319, 322, 465, 493, 496, 655, 658, 1111
BsgI GTGCAG 1 cut(s) 1032
Bsh1236I CGCG 4 cut(s) 96, 204, 795, 833
Bsh1285I CGRYCG 2 cut(s) 755, 793
BshFI GGCC 3 cut(s) 93, 196, 1006
BshNI GGYRCC 1 cut(s) 922
BsiEI CGRYCG 2 cut(s) 755, 793
BsiHKAI GWGCWC 1 cut(s) 114
BsiHKCI CYCGRG 1 cut(s) 113
BsiSI CCGG 5 cut(s) 377, 539, 569, 713, 743
BslFI GGGAC 1 cut(s) 1158
BslI CCNNNNNNNGG 4 cut(s) 13, 100, 203, 1013
BsmAI GTCTC 1 cut(s) 1064
BsmFI GGGAC 1 cut(s) 1158
BsnI GGCC 3 cut(s) 93, 196, 1006
BsoBI CYCGRG 1 cut(s) 113
Bsp119I TTCGAA 3 cut(s) 261, 435, 1105
Bsp1286I GDGCHC 2 cut(s) 114, 460
Bsp143I GATC 3 cut(s) 45, 790, 975
BspANI GGCC 3 cut(s) 93, 196, 1006
BspCNI CTCAG 2 cut(s) 277, 472
BspFNI CGCG 4 cut(s) 96, 204, 795, 833
BspLI GGNNCC 4 cut(s) 300, 474, 636, 924
BspMAI CTGCAG 3 cut(s) 309, 483, 645
BspMI ACCTGC 1 cut(s) 1004
BspPI GGATC 2 cut(s) 40, 983
BspT104I TTCGAA 3 cut(s) 261, 435, 1105
BspT107I GGYRCC 1 cut(s) 922
BssECI CCNNGG 2 cut(s) 78, 743
BssMI GATC 3 cut(s) 45, 790, 975
BssNI GRCGYC 3 cut(s) 32, 852, 923
Bst4CI ACNGT 1 cut(s) 867
Bst6I CTCTTC 6 cut(s) 348, 594, 672, 684, 977, 1062
BstACI GRCGYC 3 cut(s) 32, 852, 923
BstBAI YACGTR 1 cut(s) 919
BstBI TTCGAA 3 cut(s) 261, 435, 1105
BstC8I GCNNGC 5 cut(s) 39, 91, 781, 1046, 1185
BstDEI CTNAG 3 cut(s) 285, 459, 903
BstDSI CCRYGG 1 cut(s) 78
BstENI CCTNNNNNAGG 1 cut(s) 11
BstF5I GGATG 4 cut(s) 253, 427, 763, 967
BstFNI CGCG 4 cut(s) 96, 204, 795, 833
BstH2I RGCGCY 1 cut(s) 926
BstHHI GCGC 2 cut(s) 833, 925
BstKTI GATC 3 cut(s) 48, 793, 978
BstMAI GTCTC 1 cut(s) 1064
BstMBI GATC 3 cut(s) 45, 790, 975
BstMCI CGRYCG 2 cut(s) 755, 793
BstMWI GCNNNNNNNGC 8 cut(s) 38, 307, 310, 481, 484, 643, 748, 839
BstNSI RCATGY 1 cut(s) 1187
BstSCI CCNGG 1 cut(s) 742
BstSFI CTRYAG 4 cut(s) 305, 479, 641, 1127
BstUI CGCG 4 cut(s) 96, 204, 795, 833
BstV1I GCAGC 9 cut(s) 291, 319, 322, 465, 493, 496, 655, 658, 1111
BstV2I GAAGAC 2 cut(s) 917, 1114
BsuI GTATCC 1 cut(s) 1028
BsuRI GGCC 3 cut(s) 93, 196, 1006
BtgI CCRYGG 1 cut(s) 78
BtsCI GGATG 4 cut(s) 253, 427, 763, 967
BtsI GCAGTG 1 cut(s) 638
BtsIMutI CAGTG 4 cut(s) 558, 638, 732, 958
BveI ACCTGC 1 cut(s) 1004
Cac8I GCNNGC 5 cut(s) 39, 91, 781, 1046, 1185
CaiI CAGNNNCTG 1 cut(s) 19
CfoI GCGC 2 cut(s) 833, 925
Cfr13I GGNCC 4 cut(s) 4, 16, 194, 1242
CseI GACGC 1 cut(s) 21
CviAII CATG 3 cut(s) 1008, 1184, 1239
DdeI CTNAG 3 cut(s) 285, 459, 903
DinI GGCGCC 1 cut(s) 924
DpnI GATC 3 cut(s) 47, 792, 977
DpnII GATC 3 cut(s) 45, 790, 975
EaeI YGGCCR 2 cut(s) 91, 1004
Eam1104I CTCTTC 6 cut(s) 348, 594, 672, 684, 977, 1062
EarI CTCTTC 6 cut(s) 348, 594, 672, 684, 977, 1062
EciI GGCGGA 1 cut(s) 122
Ecl136II GAGCTC 1 cut(s) 112
Eco24I GRGCYC 2 cut(s) 114, 460
Eco47I GGWCC 3 cut(s) 4, 16, 1242
Eco53kI GAGCTC 1 cut(s) 112
Eco72I CACGTG 1 cut(s) 919
Eco88I CYCGRG 1 cut(s) 113
EcoICRI GAGCTC 1 cut(s) 112
EcoNI CCTNNNNNAGG 1 cut(s) 11
EcoO109I RGGNCCY 2 cut(s) 16, 194
EcoRI GAATTC 1 cut(s) 431
EcoT38I GRGCYC 2 cut(s) 114, 460
EgeI GGCGCC 1 cut(s) 924
EheI GGCGCC 1 cut(s) 924
FaeI CATG 3 cut(s) 1011, 1187, 1242
FaiI YATR 3 cut(s) 1009, 1185, 1240
FaqI GGGAC 1 cut(s) 1158
FatI CATG 3 cut(s) 1007, 1183, 1238
FauI CCCGC 3 cut(s) 419, 581, 755
FokI GGATG 4 cut(s) 260, 434, 770, 974
FriOI GRGCYC 2 cut(s) 114, 460
FspBI CTAG 2 cut(s) 1218, 1246
GlaI GCGC 2 cut(s) 832, 924
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 926
HaeIII GGCC 3 cut(s) 93, 196, 1006
HapII CCGG 5 cut(s) 377, 539, 569, 713, 743
HgaI GACGC 1 cut(s) 21
HhaI GCGC 2 cut(s) 833, 925
Hin1I GRCGYC 3 cut(s) 32, 852, 923
Hin1II CATG 3 cut(s) 1011, 1187, 1242
Hin6I GCGC 2 cut(s) 831, 923
HinP1I GCGC 2 cut(s) 831, 923
HinfI GANTC 6 cut(s) 98, 211, 356, 518, 692, 1235
HpaII CCGG 5 cut(s) 377, 539, 569, 713, 743
HphI GGTGA 4 cut(s) 149, 172, 632, 637
Hpy188III TCNNGA 6 cut(s) 14, 461, 491, 653, 942, 979
Hpy99I CGWCG 5 cut(s) 37, 65, 77, 854, 857
HpyAV CCTTC 8 cut(s) 134, 185, 227, 238, 257, 431, 488, 650
HpyCH4III ACNGT 1 cut(s) 867
HpyCH4IV ACGT 2 cut(s) 852, 918
HpyCH4V TGCA 6 cut(s) 307, 481, 643, 1013, 1060, 1099
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 307, 310, 481, 484, 643, 748, 839
HpyF3I CTNAG 3 cut(s) 285, 459, 903
HpySE526I ACGT 2 cut(s) 852, 918
Hsp92I GRCGYC 3 cut(s) 32, 852, 923
Hsp92II CATG 3 cut(s) 1011, 1187, 1242
HspAI GCGC 2 cut(s) 831, 923
KasI GGCGCC 1 cut(s) 922
Kzo9I GATC 3 cut(s) 45, 790, 975
LmnI GCTCC 4 cut(s) 109, 298, 472, 634
Lsp1109I GCAGC 9 cut(s) 291, 319, 322, 465, 493, 496, 655, 658, 1111
LweI GCATC 3 cut(s) 322, 496, 658
MaeI CTAG 2 cut(s) 1218, 1246
MaeII ACGT 2 cut(s) 852, 918
MaeIII GTNAC 1 cut(s) 953
MalI GATC 3 cut(s) 47, 792, 977
MboI GATC 3 cut(s) 45, 790, 975
MhlI GDGCHC 2 cut(s) 114, 460
MlsI TGGCCA 1 cut(s) 1006
MluCI AATT 3 cut(s) 431, 593, 825
MluNI TGGCCA 1 cut(s) 1006
Mly113I GGCGCC 1 cut(s) 923
MlyI GAGTC 5 cut(s) 107, 220, 365, 527, 701
MmeI TCCRAC 7 cut(s) 81, 327, 399, 715, 735, 849, 1045
Mox20I TGGCCA 1 cut(s) 1006
MroXI GAANNNNTTC 3 cut(s) 273, 447, 609
MscI TGGCCA 1 cut(s) 1006
MseI TTAA 1 cut(s) 936
MslI CAYNNNNRTG 2 cut(s) 618, 1182
Msp20I TGGCCA 1 cut(s) 1006
MspA1I CMGCKG 3 cut(s) 304, 392, 478
MspI CCGG 5 cut(s) 377, 539, 569, 713, 743
MspR9I CCNGG 1 cut(s) 744
MvnI CGCG 4 cut(s) 96, 204, 795, 833
MwoI GCNNNNNNNGC 8 cut(s) 38, 307, 310, 481, 484, 643, 748, 839
NarI GGCGCC 1 cut(s) 923
NciI CCSGG 1 cut(s) 744
NdeII GATC 3 cut(s) 45, 790, 975
NlaIII CATG 3 cut(s) 1011, 1187, 1242
NlaIV GGNNCC 4 cut(s) 300, 474, 636, 924
NmuCI GTSAC 1 cut(s) 953
NspI RCATGY 1 cut(s) 1187
NspV TTCGAA 3 cut(s) 261, 435, 1105
PaeI GCATGC 1 cut(s) 1187
PcsI WCGNNNNNNNCGW 5 cut(s) 69, 258, 322, 496, 858
PdmI GAANNNNTTC 3 cut(s) 273, 447, 609
PfeI GAWTC 1 cut(s) 1235
PflFI GACNNNGTC 2 cut(s) 31, 321
Ple19I CGATCG 1 cut(s) 793
PleI GAGTC 5 cut(s) 106, 219, 364, 526, 700
PluTI GGCGCC 1 cut(s) 926
PmaCI CACGTG 1 cut(s) 919
PmlI CACGTG 1 cut(s) 919
PpsI GAGTC 5 cut(s) 106, 219, 364, 526, 700
Ppu21I YACGTR 1 cut(s) 919
PpuMI RGGWCCY 1 cut(s) 16
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 16
PspCI CACGTG 1 cut(s) 919
PspN4I GGNNCC 4 cut(s) 300, 474, 636, 924
PspPI GGNCC 4 cut(s) 4, 16, 194, 1242
PspPPI RGGWCCY 1 cut(s) 16
PstI CTGCAG 3 cut(s) 309, 483, 645
PstNI CAGNNNCTG 1 cut(s) 19
PsyI GACNNNGTC 2 cut(s) 31, 321
PvuI CGATCG 1 cut(s) 793
RseI CAYNNNNRTG 2 cut(s) 618, 1182
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 936
Sau3AI GATC 3 cut(s) 45, 790, 975
Sau96I GGNCC 4 cut(s) 4, 16, 194, 1242
SchI GAGTC 5 cut(s) 107, 220, 365, 527, 701
ScrFI CCNGG 1 cut(s) 744
SduI GDGCHC 2 cut(s) 114, 460
SfaNI GCATC 3 cut(s) 322, 496, 658
SfcI CTRYAG 4 cut(s) 305, 479, 641, 1127
SfoI GGCGCC 1 cut(s) 924
SfuI TTCGAA 3 cut(s) 261, 435, 1105
SinI GGWCC 3 cut(s) 4, 16, 1242
SmiMI CAYNNNNRTG 2 cut(s) 618, 1182
SmlI CTYRAG 1 cut(s) 1037
SmoI CTYRAG 1 cut(s) 1037
SphI GCATGC 1 cut(s) 1187
Sse9I AATT 3 cut(s) 431, 593, 825
SspDI GGCGCC 1 cut(s) 922
SspMI CTAG 2 cut(s) 1218, 1246
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 742
TaaI ACNGT 1 cut(s) 867
TaiI ACGT 2 cut(s) 855, 921
TaqI TCGA 9 cut(s) 168, 261, 316, 435, 490, 652, 789, 978, 1105
TasI AATT 3 cut(s) 431, 593, 825
TauI GCSGC 5 cut(s) 96, 135, 304, 395, 478
TfiI GAWTC 1 cut(s) 1235
Tru1I TTAA 1 cut(s) 936
Tru9I TTAA 1 cut(s) 936
TscAI CASTG 4 cut(s) 558, 645, 732, 958
TseFI GTSAC 1 cut(s) 953
TseI GCWGC 9 cut(s) 304, 307, 310, 478, 481, 484, 643, 646, 1099
Tsp45I GTSAC 1 cut(s) 953
TspDTI ATGAA 5 cut(s) 266, 440, 602, 1197, 1227
TspGWI ACGGA 3 cut(s) 350, 524, 686
TspRI CASTG 4 cut(s) 558, 645, 732, 958
Tth111I GACNNNGTC 2 cut(s) 31, 321
VpaK11BI GGWCC 3 cut(s) 4, 16, 1242
XagI CCTNNNNNAGG 1 cut(s) 11
XapI RAATTY 2 cut(s) 431, 593
XceI RCATGY 1 cut(s) 1187
XmnI GAANNNNTTC 3 cut(s) 273, 447, 609
XspI CTAG 2 cut(s) 1218, 1246
ZraI GACGTC 1 cut(s) 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.