Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007663

Physical Location & Seq

Genomic Coordinates Reverse (-)

37619741 .. 37620106

Gene Structure 366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G443700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 366 bp

ATGGCGAATCAATCAAAAGAAATTACCCAGAACCTCTACGGCCGGTCAGCTCCACCCTCACACCAGACAGTCAAGCTCTTGACCGCAGCCATAGTTGGTGCCACGCTGTTATTCTTGTCCGGGTTAACTCTGACCGGGACGGTGATTGCCCTGATCATGGCTACCCCTGTCCTGGTGCTCTTTAGTCCAATTCTAGTCCCCGCTGGGATAGTCATGCTCCTCATAGCAGCCGGCTTTGTTTTCTCCGGCGGTTGTGGCATGGCAGCAATGACGGTGATGGCATGGTTATATAACTATGTATCTAACTATGCGGCTGCGAAGCAAAGGGCTAATGCATACAGGCAGTTCGTGATGCTTGATATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oleosin

Protein Analysis

122

Amino Acids

12.83

Weight (kDa)

9.58

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007663)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25890 AT2G25890
fragaria_vesca	FvH4_2g35151 FvH4_2g35160 FvH4_3g15571
malus_domestica	MD08G1109100.v1.1
prunus_persica	Prupe.1G443700_v2.0.a1
pyrus_communis	pycom08g09100 pycom08g09120
rosa_chinensis	RchiOBHm_Chr6g0306781 RchiOBHm_Chr6g0306791
rosa_laevigata	RLG00000010766
rosa_multiflora	Rmu_sc0009381.1_g000001 Rmu_sc0042119.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161460
rosa_rugosa	Rorug06G0352800 Rorug06G0352900
rosa_samantha	Rh6AG464700 Rh6BG436000 Rh6BG436100 Rh6CG479100 Rh6CG479200 Rh6DG466100
rosa_wichuraiana	Rw6G040500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	98
AciI	CCGC	4 cut(s)	84, 201, 249, 311
AcoI	YGGCCR	1 cut(s)	40
AfiI	CCNNNNNNNGG	2 cut(s)	157, 172
AjnI	CCWGG	1 cut(s)	171
AluBI	AGCT	2 cut(s)	50, 76
AluI	AGCT	2 cut(s)	50, 76
Alw21I	GWGCWC	1 cut(s)	180
AoxI	GGCC	1 cut(s)	40
ApeKI	GCWGC	4 cut(s)	86, 227, 263, 314
AsuC2I	CCSGG	2 cut(s)	121, 136
AsuHPI	GGTGA	2 cut(s)	154, 286
BanI	GGYRCC	1 cut(s)	98
Bbv12I	GWGCWC	1 cut(s)	180
BbvI	GCAGC	4 cut(s)	98, 239, 275, 301
BccI	CCATC	1 cut(s)	271
BceAI	ACGGC	1 cut(s)	55
BciT130I	CCWGG	1 cut(s)	173
BclI	TGATCA	1 cut(s)	153
BcnI	CCSGG	2 cut(s)	121, 136
BfaI	CTAG	1 cut(s)	194
BisI	GCNGC	5 cut(s)	87, 228, 264, 312, 315
BlsI	GCNGC	5 cut(s)	88, 229, 265, 313, 316
Bme1390I	CCNGG	3 cut(s)	121, 136, 173
BmiI	GGNNCC	1 cut(s)	100
BmrFI	CCNGG	3 cut(s)	121, 136, 173
BmsI	GCATC	1 cut(s)	342
BpuMI	CCSGG	2 cut(s)	121, 136
Bsc4I	CCNNNNNNNGG	2 cut(s)	157, 172
Bse118I	RCCGGY	2 cut(s)	42, 230
Bse3DI	GCAATG	1 cut(s)	273
BseBI	CCWGG	1 cut(s)	173
BseLI	CCNNNNNNNGG	2 cut(s)	157, 172
BseMI	GCAATG	1 cut(s)	273
BseRI	GAGGAG	1 cut(s)	209
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	4 cut(s)	98, 239, 275, 301
BseYI	CCCAGC	1 cut(s)	203
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	1 cut(s)	42
BshNI	GGYRCC	1 cut(s)	98
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	1 cut(s)	180
BsiSI	CCGG	5 cut(s)	43, 120, 135, 231, 246
BslFI	GGGAC	2 cut(s)	151, 182
BslI	CCNNNNNNNGG	2 cut(s)	157, 172
BsmFI	GGGAC	2 cut(s)	151, 182
BsnI	GGCC	1 cut(s)	42
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	1 cut(s)	153
BspACI	CCGC	4 cut(s)	84, 201, 249, 311
BspANI	GGCC	1 cut(s)	42
BspLI	GGNNCC	1 cut(s)	100
BspT107I	GGYRCC	1 cut(s)	98
BsrDI	GCAATG	1 cut(s)	273
BsrFI	RCCGGY	2 cut(s)	42, 230
BssAI	RCCGGY	2 cut(s)	42, 230
BssMI	GATC	1 cut(s)	153
Bst2UI	CCWGG	1 cut(s)	173
Bst4CI	ACNGT	3 cut(s)	70, 142, 274
BstC8I	GCNNGC	1 cut(s)	232
BstKTI	GATC	1 cut(s)	156
BstMBI	GATC	1 cut(s)	153
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	1 cut(s)	255
BstNI	CCWGG	1 cut(s)	173
BstSCI	CCNGG	3 cut(s)	119, 134, 171
BstV1I	GCAGC	4 cut(s)	98, 239, 275, 301
BstZI	CGGCCG	1 cut(s)	40
BsuRI	GGCC	1 cut(s)	42
Cac8I	GCNNGC	1 cut(s)	232
Cfr10I	RCCGGY	2 cut(s)	42, 230
CviAII	CATG	4 cut(s)	157, 214, 259, 282
CviJI	RGCY	9 cut(s)	42, 50, 76, 89, 161, 230, 234, 314, 329
CviKI_1	RGCY	9 cut(s)	42, 50, 76, 89, 161, 230, 234, 314, 329
DpnI	GATC	1 cut(s)	155
DpnII	GATC	1 cut(s)	153
EaeI	YGGCCR	1 cut(s)	40
EagI	CGGCCG	1 cut(s)	40
EclXI	CGGCCG	1 cut(s)	40
Eco52I	CGGCCG	1 cut(s)	40
EcoRII	CCWGG	1 cut(s)	171
EcoT22I	ATGCAT	1 cut(s)	337
FaeI	CATG	4 cut(s)	160, 217, 262, 285
FaqI	GGGAC	2 cut(s)	151, 182
FatI	CATG	4 cut(s)	156, 213, 258, 281
FauI	CCCGC	1 cut(s)	208
FbaI	TGATCA	1 cut(s)	153
Fnu4HI	GCNGC	5 cut(s)	87, 228, 264, 312, 315
Fsp4HI	GCNGC	5 cut(s)	87, 228, 264, 312, 315
FspBI	CTAG	1 cut(s)	194
GluI	GCNGC	5 cut(s)	87, 228, 264, 312, 315
GsaI	CCCAGC	1 cut(s)	207
HaeIII	GGCC	1 cut(s)	42
HapII	CCGG	5 cut(s)	43, 120, 135, 231, 246
Hin1II	CATG	4 cut(s)	160, 217, 262, 285
HincII	GTYRAC	1 cut(s)	126
HindII	GTYRAC	1 cut(s)	126
HinfI	GANTC	1 cut(s)	7
HpaI	GTTAAC	1 cut(s)	126
HpaII	CCGG	5 cut(s)	43, 120, 135, 231, 246
HphI	GGTGA	2 cut(s)	154, 286
Hpy166II	GTNNAC	1 cut(s)	126
Hpy188I	TCNGA	1 cut(s)	132
Hpy188III	TCNNGA	2 cut(s)	79, 349
Hpy8I	GTNNAC	1 cut(s)	126
HpyCH4III	ACNGT	3 cut(s)	70, 142, 274
HpyCH4V	TGCA	1 cut(s)	335
HpyF10VI	GCNNNNNNNGC	1 cut(s)	255
Hsp92II	CATG	4 cut(s)	160, 217, 262, 285
KroI	GCCGGC	1 cut(s)	230
KroNI	GCCGGC	1 cut(s)	232
Ksp22I	TGATCA	1 cut(s)	153
KspAI	GTTAAC	1 cut(s)	126
Kzo9I	GATC	1 cut(s)	153
LmnI	GCTCC	2 cut(s)	55, 222
Lsp1109I	GCAGC	4 cut(s)	98, 239, 275, 301
LweI	GCATC	1 cut(s)	342
MaeI	CTAG	1 cut(s)	194
MalI	GATC	1 cut(s)	155
MboI	GATC	1 cut(s)	153
MhlI	GDGCHC	1 cut(s)	180
MluCI	AATT	2 cut(s)	21, 189
MnlI	CCTC	3 cut(s)	44, 67, 230
Mph1103I	ATGCAT	1 cut(s)	337
MroNI	GCCGGC	1 cut(s)	230
MseI	TTAA	1 cut(s)	125
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	5 cut(s)	43, 120, 135, 231, 246
MspR9I	CCNGG	3 cut(s)	121, 136, 173
MvaI	CCWGG	1 cut(s)	173
MwoI	GCNNNNNNNGC	1 cut(s)	255
NaeI	GCCGGC	1 cut(s)	232
NciI	CCSGG	2 cut(s)	121, 136
NdeII	GATC	1 cut(s)	153
NgoMIV	GCCGGC	1 cut(s)	230
NlaIII	CATG	4 cut(s)	160, 217, 262, 285
NlaIV	GGNNCC	1 cut(s)	100
NsiI	ATGCAT	1 cut(s)	337
PdiI	GCCGGC	1 cut(s)	232
PfeI	GAWTC	1 cut(s)	7
PkrI	GCNGC	5 cut(s)	88, 229, 265, 313, 316
Psp6I	CCWGG	1 cut(s)	171
PspFI	CCCAGC	1 cut(s)	203
PspGI	CCWGG	1 cut(s)	171
PspN4I	GGNNCC	1 cut(s)	100
SaqAI	TTAA	1 cut(s)	125
SatI	GCNGC	5 cut(s)	87, 228, 264, 312, 315
Sau3AI	GATC	1 cut(s)	153
ScrFI	CCNGG	3 cut(s)	121, 136, 173
SduI	GDGCHC	1 cut(s)	180
SetI	ASST	3 cut(s)	36, 52, 78
SfaNI	GCATC	1 cut(s)	342
Sse9I	AATT	2 cut(s)	21, 189
SsiI	CCGC	4 cut(s)	84, 201, 249, 311
SspMI	CTAG	1 cut(s)	194
StyD4I	CCNGG	3 cut(s)	119, 134, 171
TaaI	ACNGT	3 cut(s)	70, 142, 274
TasI	AATT	2 cut(s)	21, 189
TauI	GCSGC	1 cut(s)	314
TfiI	GAWTC	1 cut(s)	7
Tru1I	TTAA	1 cut(s)	125
Tru9I	TTAA	1 cut(s)	125
TseI	GCWGC	4 cut(s)	86, 227, 263, 314
XspI	CTAG	1 cut(s)	194
Zsp2I	ATGCAT	1 cut(s)	337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.