RLG00000010766

Oleosin 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0007663
Physical Location & Seq
Reverse (-)
4210901 .. 4212596
1696 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010766

Sequence Viewer

Length: 489 bp
ATGGAGTCTTATCAGAAGCCGGAAGATTACTCGGCCCTATCCTCCGGCGAGATTGCTAGTACTGTCAAGTTTTTGTGCTGGACTGCAATTGGCATCACGCTATATTTCTTCTCCGGGTTAACTCTAACTGGGACTTTGATGGCGCTGATCGTGTACTCGTTTCCGTCCTCACGGGGCCAGACTAGCATAACCAGGTCCTTAACCGCCGGCGCAATTGGCACCACGCTTTTAGGCTTGTCCGCGTTAACTTTAACCGGGACCGTGATGGCCCTGATCCTGGCCACCCCAGTGCTAGTGCTGTTTAGTCCGGTCCTAGTCCCGGCGGCAATAGTCGTGGTCCTAGTAGCAGCTGGTTTTGTTTTCTCCGGCGGGTGTGGCGTGGCTGCCATCGCGGCGCTGACGTGGTTGTACAAGTATGTATCCAACTACGTCTCTACCAGGAGAAGGGATTACACTTATGGGGGGTCTTACGCTCAATTTGGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

163

Amino Acids

17.05

Weight (kDa)

8.95

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oleosin PF01277 63 - 143 7.4e-29 Oleosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 218
AccII CGCG 2 cut(s) 242, 392
AciI CCGC 5 cut(s) 204, 240, 323, 369, 392
AclWI GGATC 1 cut(s) 268
AcoI YGGCCR 1 cut(s) 279
AfaI GTAC 3 cut(s) 61, 155, 410
AfiI CCNNNNNNNGG 3 cut(s) 277, 319, 444
AjiI CACGTC 1 cut(s) 402
AjnI CCWGG 3 cut(s) 191, 276, 437
AleI CACNNNNGTG 1 cut(s) 287
AluBI AGCT 1 cut(s) 350
AluI AGCT 1 cut(s) 350
Alw26I GTCTC 1 cut(s) 436
AlwI GGATC 1 cut(s) 268
AoxI GGCC 4 cut(s) 33, 175, 267, 279
ApeKI GCWGC 2 cut(s) 347, 383
AspLEI GCGC 3 cut(s) 145, 212, 397
AspS9I GGNCC 7 cut(s) 34, 175, 195, 258, 268, 310, 337
AsuC2I CCSGG 3 cut(s) 115, 256, 320
AvaII GGWCC 4 cut(s) 195, 258, 310, 337
BalI TGGCCA 1 cut(s) 281
BanI GGYRCC 1 cut(s) 218
BbvI GCAGC 2 cut(s) 359, 370
BccI CCATC 3 cut(s) 133, 259, 395
BciT130I CCWGG 3 cut(s) 193, 278, 439
BciVI GTATCC 1 cut(s) 430
BcnI CCSGG 3 cut(s) 115, 256, 320
BcoDI GTCTC 1 cut(s) 436
BfaI CTAG 5 cut(s) 57, 183, 293, 314, 341
BfoI RGCGCY 2 cut(s) 146, 398
BfuI GTATCC 1 cut(s) 430
BglI GCCNNNNNGGC 1 cut(s) 392
BisI GCNGC 4 cut(s) 324, 348, 384, 393
BlsI GCNGC 4 cut(s) 325, 349, 385, 394
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 6 cut(s) 115, 193, 256, 278, 320, 439
Bme18I GGWCC 4 cut(s) 195, 258, 310, 337
BmgBI CACGTC 1 cut(s) 402
BmgT120I GGNCC 7 cut(s) 34, 175, 195, 258, 268, 310, 337
BmiI GGNNCC 3 cut(s) 176, 220, 259
BmrFI CCNGG 6 cut(s) 115, 193, 256, 278, 320, 439
BmrI ACTGGG 2 cut(s) 138, 281
BmsI GCATC 1 cut(s) 102
BmuI ACTGGG 2 cut(s) 138, 281
BpuMI CCSGG 3 cut(s) 115, 256, 320
BsaWI WCCGGW 1 cut(s) 307
Bsc4I CCNNNNNNNGG 3 cut(s) 277, 319, 444
Bse118I RCCGGY 1 cut(s) 206
Bse1I ACTGG 2 cut(s) 133, 287
BseBI CCWGG 3 cut(s) 193, 278, 439
BseLI CCNNNNNNNGG 3 cut(s) 277, 319, 444
BseNI ACTGG 2 cut(s) 133, 287
BseXI GCAGC 2 cut(s) 359, 370
Bsh1236I CGCG 2 cut(s) 242, 392
BshFI GGCC 4 cut(s) 35, 177, 269, 281
BshNI GGYRCC 1 cut(s) 218
BsiSI CCGG 8 cut(s) 20, 45, 114, 207, 255, 308, 320, 366
BslFI GGGAC 3 cut(s) 145, 271, 302
BslI CCNNNNNNNGG 3 cut(s) 277, 319, 444
BsmAI GTCTC 1 cut(s) 436
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 3 cut(s) 145, 271, 302
BsnI GGCC 4 cut(s) 35, 177, 269, 281
Bsp1407I TGTACA 1 cut(s) 408
Bsp143I GATC 2 cut(s) 147, 273
BspACI CCGC 5 cut(s) 204, 240, 323, 369, 392
BspANI GGCC 4 cut(s) 35, 177, 269, 281
BspFNI CGCG 2 cut(s) 242, 392
BspLI GGNNCC 3 cut(s) 176, 220, 259
BspPI GGATC 1 cut(s) 268
BspT107I GGYRCC 1 cut(s) 218
BsrFI RCCGGY 1 cut(s) 206
BsrGI TGTACA 1 cut(s) 408
BsrI ACTGG 2 cut(s) 133, 287
BssAI RCCGGY 1 cut(s) 206
BssMI GATC 2 cut(s) 147, 273
Bst2UI CCWGG 3 cut(s) 193, 278, 439
Bst4CI ACNGT 2 cut(s) 64, 262
BstAUI TGTACA 1 cut(s) 408
BstC8I GCNNGC 1 cut(s) 208
BstFNI CGCG 2 cut(s) 242, 392
BstH2I RGCGCY 2 cut(s) 146, 398
BstHHI GCGC 3 cut(s) 145, 212, 397
BstKTI GATC 2 cut(s) 150, 276
BstMAI GTCTC 1 cut(s) 436
BstMBI GATC 2 cut(s) 147, 273
BstMWI GCNNNNNNNGC 5 cut(s) 183, 216, 375, 389, 392
BstNI CCWGG 3 cut(s) 193, 278, 439
BstSCI CCNGG 6 cut(s) 113, 191, 254, 276, 318, 437
BstUI CGCG 2 cut(s) 242, 392
BstV1I GCAGC 2 cut(s) 359, 370
BsuI GTATCC 1 cut(s) 430
BsuRI GGCC 4 cut(s) 35, 177, 269, 281
BtgZI GCGATG 1 cut(s) 373
BtrI CACGTC 1 cut(s) 402
BtsIMutI CAGTG 1 cut(s) 294
Cac8I GCNNGC 1 cut(s) 208
CfoI GCGC 3 cut(s) 145, 212, 397
Cfr10I RCCGGY 1 cut(s) 206
Cfr13I GGNCC 7 cut(s) 34, 175, 195, 258, 268, 310, 337
CsiI ACCWGGT 1 cut(s) 191
Csp6I GTAC 3 cut(s) 60, 154, 409
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviJI RGCY 8 cut(s) 19, 35, 177, 234, 269, 281, 350, 383
CviKI_1 RGCY 8 cut(s) 19, 35, 177, 234, 269, 281, 350, 383
CviQI GTAC 3 cut(s) 60, 154, 409
DpnI GATC 2 cut(s) 149, 275
DpnII GATC 2 cut(s) 147, 273
EaeI YGGCCR 1 cut(s) 279
Eco47I GGWCC 4 cut(s) 195, 258, 310, 337
EcoO109I RGGNCCY 1 cut(s) 195
EcoRII CCWGG 3 cut(s) 191, 276, 437
Esp3I CGTCTC 1 cut(s) 436
FaiI YATR 5 cut(s) 103, 188, 417, 459, 487
FaqI GGGAC 3 cut(s) 145, 271, 302
FauI CCCGC 1 cut(s) 362
Fnu4HI GCNGC 4 cut(s) 324, 348, 384, 393
Fsp4HI GCNGC 4 cut(s) 324, 348, 384, 393
FspBI CTAG 5 cut(s) 57, 183, 293, 314, 341
GlaI GCGC 3 cut(s) 144, 211, 396
GluI GCNGC 4 cut(s) 324, 348, 384, 393
HaeII RGCGCY 2 cut(s) 146, 398
HaeIII GGCC 4 cut(s) 35, 177, 269, 281
HapII CCGG 8 cut(s) 20, 45, 114, 207, 255, 308, 320, 366
HhaI GCGC 3 cut(s) 145, 212, 397
Hin6I GCGC 3 cut(s) 143, 210, 395
HinP1I GCGC 3 cut(s) 143, 210, 395
HincII GTYRAC 2 cut(s) 120, 246
HindII GTYRAC 2 cut(s) 120, 246
HinfI GANTC 1 cut(s) 5
HpaI GTTAAC 2 cut(s) 120, 246
HpaII CCGG 8 cut(s) 20, 45, 114, 207, 255, 308, 320, 366
Hpy166II GTNNAC 3 cut(s) 120, 154, 246
Hpy188I TCNGA 1 cut(s) 15
Hpy8I GTNNAC 3 cut(s) 120, 154, 246
HpyAV CCTTC 1 cut(s) 438
HpyCH4III ACNGT 2 cut(s) 64, 262
HpyCH4IV ACGT 2 cut(s) 401, 429
HpyCH4V TGCA 1 cut(s) 86
HpyF10VI GCNNNNNNNGC 5 cut(s) 183, 216, 375, 389, 392
HpySE526I ACGT 2 cut(s) 401, 429
HspAI GCGC 3 cut(s) 143, 210, 395
KroI GCCGGC 1 cut(s) 206
KroNI GCCGGC 1 cut(s) 208
KspAI GTTAAC 2 cut(s) 120, 246
Kzo9I GATC 2 cut(s) 147, 273
Lsp1109I GCAGC 2 cut(s) 359, 370
LweI GCATC 1 cut(s) 102
MabI ACCWGGT 1 cut(s) 191
MaeI CTAG 5 cut(s) 57, 183, 293, 314, 341
MaeII ACGT 2 cut(s) 401, 429
MalI GATC 2 cut(s) 149, 275
MboI GATC 2 cut(s) 147, 273
MboII GAAGA 2 cut(s) 35, 100
MfeI CAATTG 2 cut(s) 87, 213
MlsI TGGCCA 1 cut(s) 281
MluCI AATT 3 cut(s) 87, 213, 476
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 447
MnlI CCTC 2 cut(s) 52, 178
Mox20I TGGCCA 1 cut(s) 281
MreI CGCCGGCG 1 cut(s) 206
MroNI GCCGGC 1 cut(s) 206
MscI TGGCCA 1 cut(s) 281
MseI TTAA 4 cut(s) 119, 200, 245, 251
MslI CAYNNNNRTG 1 cut(s) 287
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 350
MspI CCGG 8 cut(s) 20, 45, 114, 207, 255, 308, 320, 366
MspR9I CCNGG 6 cut(s) 115, 193, 256, 278, 320, 439
MunI CAATTG 2 cut(s) 87, 213
MvaI CCWGG 3 cut(s) 193, 278, 439
MvnI CGCG 2 cut(s) 242, 392
MwoI GCNNNNNNNGC 5 cut(s) 183, 216, 375, 389, 392
NaeI GCCGGC 1 cut(s) 208
NciI CCSGG 3 cut(s) 115, 256, 320
NdeII GATC 2 cut(s) 147, 273
NgoMIV GCCGGC 1 cut(s) 206
NlaIV GGNNCC 3 cut(s) 176, 220, 259
NmeAIII GCCGAG 1 cut(s) 11
OliI CACNNNNGTG 1 cut(s) 287
PdiI GCCGGC 1 cut(s) 208
PkrI GCNGC 4 cut(s) 325, 349, 385, 394
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
PpuMI RGGWCCY 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 195
Psp6I CCWGG 3 cut(s) 191, 276, 437
PspGI CCWGG 3 cut(s) 191, 276, 437
PspN4I GGNNCC 3 cut(s) 176, 220, 259
PspPI GGNCC 7 cut(s) 34, 175, 195, 258, 268, 310, 337
PspPPI RGGWCCY 1 cut(s) 195
PvuII CAGCTG 1 cut(s) 350
RsaI GTAC 3 cut(s) 61, 155, 410
RsaNI GTAC 3 cut(s) 60, 154, 409
RseI CAYNNNNRTG 1 cut(s) 287
SaqAI TTAA 4 cut(s) 119, 200, 245, 251
SatI GCNGC 4 cut(s) 324, 348, 384, 393
Sau3AI GATC 2 cut(s) 147, 273
Sau96I GGNCC 7 cut(s) 34, 175, 195, 258, 268, 310, 337
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 6 cut(s) 115, 193, 256, 278, 320, 439
SetI ASST 4 cut(s) 197, 352, 404, 432
SexAI ACCWGGT 1 cut(s) 191
SfaNI GCATC 1 cut(s) 102
SgrAI CRCCGGYG 1 cut(s) 206
SinI GGWCC 4 cut(s) 195, 258, 310, 337
SmiMI CAYNNNNRTG 1 cut(s) 287
Sse9I AATT 3 cut(s) 87, 213, 476
SsiI CCGC 5 cut(s) 204, 240, 323, 369, 392
SspMI CTAG 5 cut(s) 57, 183, 293, 314, 341
StyD4I CCNGG 6 cut(s) 113, 191, 254, 276, 318, 437
TaaI ACNGT 2 cut(s) 64, 262
TaiI ACGT 2 cut(s) 404, 432
TasI AATT 3 cut(s) 87, 213, 476
TatI WGTACW 3 cut(s) 59, 153, 408
TauI GCSGC 2 cut(s) 326, 395
Tru1I TTAA 4 cut(s) 119, 200, 245, 251
Tru9I TTAA 4 cut(s) 119, 200, 245, 251
TscAI CASTG 1 cut(s) 294
TseI GCWGC 2 cut(s) 347, 383
TspGWI ACGGA 1 cut(s) 153
TspRI CASTG 1 cut(s) 294
VpaK11BI GGWCC 4 cut(s) 195, 258, 310, 337
XspI CTAG 5 cut(s) 57, 183, 293, 314, 341
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.