Rmu_sc0009381.1_g000001

Oleosin 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009381.1
OG0007663
Physical Location & Seq
Forward (+)
38 .. 913
876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009381.1_g000001.1.cds

Sequence Viewer

Length: 282 bp
atggccctgatcctggccaccccagttctagtgctgtttagtcctgtcctagtcccggcggcaatagccgtggtcctagtagctgctggttttgttttctccggcgggtgtggcgtggctgccatcgcggcgctgacgtggttgtacaacaacgactggtgtggctctctccggcgggtgtggcgtggcaggaattacgttattgtcatggttgtatcgtatctgactacgtggccgccagaaaagggctcactcgcgcatattgggtttatttggaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oleosin

Protein Analysis

93

Amino Acids

10.05

Weight (kDa)

9.59

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 128, 257
AciI CCGC 5 cut(s) 59, 105, 128, 175, 236
AclWI GGATC 1 cut(s) 4
AcoI YGGCCR 2 cut(s) 15, 233
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 3 cut(s) 13, 55, 245
AjiI CACGTC 1 cut(s) 138
AjnI CCWGG 1 cut(s) 12
AluBI AGCT 1 cut(s) 83
AluI AGCT 1 cut(s) 83
AlwI GGATC 1 cut(s) 4
AoxI GGCC 3 cut(s) 3, 15, 233
ApeKI GCWGC 2 cut(s) 83, 119
AspLEI GCGC 2 cut(s) 133, 259
AspS9I GGNCC 2 cut(s) 4, 73
AsuC2I CCSGG 1 cut(s) 56
AvaII GGWCC 1 cut(s) 73
BalI TGGCCA 1 cut(s) 17
BanII GRGCYC 1 cut(s) 251
BbvI GCAGC 2 cut(s) 70, 106
BccI CCATC 1 cut(s) 131
BceAI ACGGC 1 cut(s) 53
BciT130I CCWGG 1 cut(s) 14
BcnI CCSGG 1 cut(s) 56
BfaI CTAG 3 cut(s) 29, 50, 77
BfoI RGCGCY 1 cut(s) 134
BglI GCCNNNNNGGC 1 cut(s) 128
BisI GCNGC 5 cut(s) 60, 84, 120, 129, 236
BlsI GCNGC 5 cut(s) 61, 85, 121, 130, 237
Bme1390I CCNGG 2 cut(s) 14, 56
Bme18I GGWCC 1 cut(s) 73
BmgBI CACGTC 1 cut(s) 138
BmgT120I GGNCC 2 cut(s) 4, 73
BmrFI CCNGG 2 cut(s) 14, 56
BmrI ACTGGG 1 cut(s) 17
BmuI ACTGGG 1 cut(s) 17
BpuMI CCSGG 1 cut(s) 56
BsaAI YACGTR 1 cut(s) 231
BsaJI CCNNGG 1 cut(s) 69
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 55, 245
Bse1I ACTGG 2 cut(s) 23, 161
BseBI CCWGG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 69
BseLI CCNNNNNNNGG 3 cut(s) 13, 55, 245
BseNI ACTGG 2 cut(s) 23, 161
BseXI GCAGC 2 cut(s) 70, 106
Bsh1236I CGCG 2 cut(s) 128, 257
BshFI GGCC 3 cut(s) 5, 17, 235
BsiSI CCGG 3 cut(s) 56, 102, 172
BslFI GGGAC 1 cut(s) 38
BslI CCNNNNNNNGG 3 cut(s) 13, 55, 245
BsmFI GGGAC 1 cut(s) 38
BsnI GGCC 3 cut(s) 5, 17, 235
Bsp1286I GDGCHC 1 cut(s) 251
Bsp1407I TGTACA 1 cut(s) 144
Bsp143I GATC 1 cut(s) 9
BspACI CCGC 5 cut(s) 59, 105, 128, 175, 236
BspANI GGCC 3 cut(s) 5, 17, 235
BspFNI CGCG 2 cut(s) 128, 257
BspPI GGATC 1 cut(s) 4
BsrGI TGTACA 1 cut(s) 144
BsrI ACTGG 2 cut(s) 23, 161
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 1 cut(s) 9
Bst2UI CCWGG 1 cut(s) 14
BstAUI TGTACA 1 cut(s) 144
BstBAI YACGTR 1 cut(s) 231
BstDSI CCRYGG 1 cut(s) 69
BstFNI CGCG 2 cut(s) 128, 257
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 2 cut(s) 133, 259
BstKTI GATC 1 cut(s) 12
BstMBI GATC 1 cut(s) 9
BstMWI GCNNNNNNNGC 5 cut(s) 65, 111, 125, 128, 181
BstNI CCWGG 1 cut(s) 14
BstSCI CCNGG 2 cut(s) 12, 54
BstUI CGCG 2 cut(s) 128, 257
BstV1I GCAGC 2 cut(s) 70, 106
BsuRI GGCC 3 cut(s) 5, 17, 235
BtgI CCRYGG 1 cut(s) 69
BtgZI GCGATG 1 cut(s) 109
BtrI CACGTC 1 cut(s) 138
CfoI GCGC 2 cut(s) 133, 259
Cfr13I GGNCC 2 cut(s) 4, 73
Csp6I GTAC 1 cut(s) 145
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 1 cut(s) 208
CviJI RGCY 8 cut(s) 5, 17, 68, 83, 119, 165, 235, 249
CviKI_1 RGCY 8 cut(s) 5, 17, 68, 83, 119, 165, 235, 249
CviQI GTAC 1 cut(s) 145
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
EaeI YGGCCR 2 cut(s) 15, 233
Eco24I GRGCYC 1 cut(s) 251
Eco47I GGWCC 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 12
EcoT38I GRGCYC 1 cut(s) 251
FaeI CATG 1 cut(s) 211
FaiI YATR 2 cut(s) 209, 261
FaqI GGGAC 1 cut(s) 38
FatI CATG 1 cut(s) 207
FauI CCCGC 2 cut(s) 98, 168
Fnu4HI GCNGC 5 cut(s) 60, 84, 120, 129, 236
FriOI GRGCYC 1 cut(s) 251
Fsp4HI GCNGC 5 cut(s) 60, 84, 120, 129, 236
FspBI CTAG 3 cut(s) 29, 50, 77
GlaI GCGC 2 cut(s) 132, 258
GluI GCNGC 5 cut(s) 60, 84, 120, 129, 236
HaeII RGCGCY 1 cut(s) 134
HaeIII GGCC 3 cut(s) 5, 17, 235
HapII CCGG 3 cut(s) 56, 102, 172
HhaI GCGC 2 cut(s) 133, 259
Hin1II CATG 1 cut(s) 211
Hin6I GCGC 2 cut(s) 131, 257
HinP1I GCGC 2 cut(s) 131, 257
HpaII CCGG 3 cut(s) 56, 102, 172
Hpy188I TCNGA 1 cut(s) 225
HpyCH4IV ACGT 3 cut(s) 137, 198, 230
HpyF10VI GCNNNNNNNGC 5 cut(s) 65, 111, 125, 128, 181
HpySE526I ACGT 3 cut(s) 137, 198, 230
Hsp92II CATG 1 cut(s) 211
HspAI GCGC 2 cut(s) 131, 257
Kzo9I GATC 1 cut(s) 9
Lsp1109I GCAGC 2 cut(s) 70, 106
MaeI CTAG 3 cut(s) 29, 50, 77
MaeII ACGT 3 cut(s) 137, 198, 230
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MhlI GDGCHC 1 cut(s) 251
MlsI TGGCCA 1 cut(s) 17
MluCI AATT 1 cut(s) 193
MluNI TGGCCA 1 cut(s) 17
Mox20I TGGCCA 1 cut(s) 17
MscI TGGCCA 1 cut(s) 17
Msp20I TGGCCA 1 cut(s) 17
MspI CCGG 3 cut(s) 56, 102, 172
MspR9I CCNGG 2 cut(s) 14, 56
MvaI CCWGG 1 cut(s) 14
MvnI CGCG 2 cut(s) 128, 257
MwoI GCNNNNNNNGC 5 cut(s) 65, 111, 125, 128, 181
NciI CCSGG 1 cut(s) 56
NdeII GATC 1 cut(s) 9
NlaIII CATG 1 cut(s) 211
PkrI GCNGC 5 cut(s) 61, 85, 121, 130, 237
Ppu21I YACGTR 1 cut(s) 231
Psp6I CCWGG 1 cut(s) 12
PspGI CCWGG 1 cut(s) 12
PspPI GGNCC 2 cut(s) 4, 73
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
SatI GCNGC 5 cut(s) 60, 84, 120, 129, 236
Sau3AI GATC 1 cut(s) 9
Sau96I GGNCC 2 cut(s) 4, 73
ScrFI CCNGG 2 cut(s) 14, 56
SduI GDGCHC 1 cut(s) 251
SetI ASST 4 cut(s) 85, 140, 201, 233
SinI GGWCC 1 cut(s) 73
Sse9I AATT 1 cut(s) 193
SsiI CCGC 5 cut(s) 59, 105, 128, 175, 236
SspMI CTAG 3 cut(s) 29, 50, 77
StyD4I CCNGG 2 cut(s) 12, 54
TaiI ACGT 3 cut(s) 140, 201, 233
TasI AATT 1 cut(s) 193
TatI WGTACW 1 cut(s) 144
TauI GCSGC 3 cut(s) 62, 131, 238
TseI GCWGC 2 cut(s) 83, 119
VpaK11BI GGWCC 1 cut(s) 73
XspI CTAG 3 cut(s) 29, 50, 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.