Double-stranded RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09700 AT1G09700 |
| fragaria_vesca | FvH4_5g35180 FvH4_5g35180 FvH4_5g35180 FvH4_5g35180 FvH4_5g35180 FvH4_5g35180 |
| malus_domestica | MD15G1387000.v1.1 |
| prunus_persica | Prupe.1G533300_v2.0.a1 Prupe.1G533300_v2.0.a1 Prupe.1G533300_v2.0.a1 |
| pyrus_communis | pycom15g34710 |
| rosa_chinensis | RchiOBHm_Chr7g0236301 |
| rosa_laevigata | RLG00000001089 |
| rosa_multiflora | Rmu_co8276251.1_g000001 Rmu_sc0005716.1_g000008 Rmu_sc0006268.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00225270 |
| rosa_rugosa | Rorug07G0295400 Rorug07G0295500 Rorug07G0295600 Rorug07G0295700 Rorug07G0295800 Rorug07G0295900 Rorug07G0295900 |
| rosa_samantha | Rh7AG450500 Rh7BG422000 Rh7CG470200 Rh7DG439500 |
| rosa_wichuraiana | Rw7G037440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1693 |
| Acc36I | ACCTGC | 1 cut(s) | 1693 |
| AccIII | TCCGGA | 2 cut(s) | 1019, 1454 |
| AciI | CCGC | 5 cut(s) | 446, 580, 1028, 1322, 1613 |
| AclWI | GGATC | 2 cut(s) | 1247, 1260 |
| AcoI | YGGCCR | 6 cut(s) | 3, 996, 1143, 1284, 1431, 1575 |
| AcsI | RAATTY | 2 cut(s) | 426, 1129 |
| AcuI | CTGAAG | 2 cut(s) | 246, 624 |
| AfaI | GTAC | 1 cut(s) | 409 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 635, 1314, 1461, 1605 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 817 |
| AjnI | CCWGG | 3 cut(s) | 382, 862, 876 |
| Alw26I | GTCTC | 3 cut(s) | 98, 602, 672 |
| AlwI | GGATC | 2 cut(s) | 1247, 1260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 224 |
| Aor13HI | TCCGGA | 2 cut(s) | 1019, 1454 |
| AoxI | GGCC | 7 cut(s) | 3, 688, 996, 1143, 1284, 1431, 1575 |
| ApeKI | GCWGC | 3 cut(s) | 221, 443, 1025 |
| ApoI | RAATTY | 2 cut(s) | 426, 1129 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1436, 1468 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 18 |
| AspS9I | GGNCC | 2 cut(s) | 119, 688 |
| AsuHPI | GGTGA | 3 cut(s) | 269, 725, 1606 |
| AsuII | TTCGAA | 1 cut(s) | 703 |
| AvaII | GGWCC | 1 cut(s) | 119 |
| BalI | TGGCCA | 2 cut(s) | 5, 998 |
| BamHI | GGATCC | 1 cut(s) | 1252 |
| BauI | CACGAG | 1 cut(s) | 236 |
| BbsI | GAAGAC | 1 cut(s) | 1236 |
| BbvI | GCAGC | 3 cut(s) | 208, 430, 1037 |
| BccI | CCATC | 3 cut(s) | 281, 574, 775 |
| BceAI | ACGGC | 1 cut(s) | 949 |
| BciT130I | CCWGG | 3 cut(s) | 384, 864, 878 |
| BciVI | GTATCC | 1 cut(s) | 1315 |
| BcoDI | GTCTC | 3 cut(s) | 98, 602, 672 |
| BfaI | CTAG | 1 cut(s) | 483 |
| BfmI | CTRYAG | 5 cut(s) | 411, 1061, 1208, 1349, 1496 |
| BfuAI | ACCTGC | 1 cut(s) | 1693 |
| BfuI | GTATCC | 1 cut(s) | 1315 |
| BisI | GCNGC | 4 cut(s) | 222, 444, 447, 1026 |
| BlsI | GCNGC | 4 cut(s) | 223, 445, 448, 1027 |
| Bme1390I | CCNGG | 3 cut(s) | 384, 864, 878 |
| Bme18I | GGWCC | 1 cut(s) | 119 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 817 |
| BmgT120I | GGNCC | 2 cut(s) | 119, 688 |
| BmiI | GGNNCC | 4 cut(s) | 534, 861, 873, 1254 |
| BmrFI | CCNGG | 3 cut(s) | 384, 864, 878 |
| BmsI | GCATC | 1 cut(s) | 775 |
| BpiI | GAAGAC | 1 cut(s) | 1236 |
| BpmI | CTGGAG | 3 cut(s) | 366, 1188, 1327 |
| Bpu14I | TTCGAA | 1 cut(s) | 703 |
| BpuEI | CTTGAG | 1 cut(s) | 681 |
| BsaBI | GATNNNNATC | 2 cut(s) | 264, 1251 |
| BsaWI | WCCGGW | 3 cut(s) | 504, 1019, 1454 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 669, 699 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 635, 1314, 1461, 1605 |
| Bse1I | ACTGG | 4 cut(s) | 55, 95, 301, 536 |
| Bse8I | GATNNNNATC | 2 cut(s) | 264, 1251 |
| BseAI | TCCGGA | 2 cut(s) | 1019, 1454 |
| BseBI | CCWGG | 3 cut(s) | 384, 864, 878 |
| BseGI | GGATG | 1 cut(s) | 790 |
| BseJI | GATNNNNATC | 2 cut(s) | 264, 1251 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 635, 1314, 1461, 1605 |
| BseMII | CTCAG | 4 cut(s) | 459, 510, 563, 687 |
| BseNI | ACTGG | 4 cut(s) | 55, 95, 301, 536 |
| BseXI | GCAGC | 3 cut(s) | 208, 430, 1037 |
| BshFI | GGCC | 7 cut(s) | 5, 690, 998, 1145, 1286, 1433, 1577 |
| BsiSI | CCGG | 3 cut(s) | 505, 1020, 1455 |
| BslFI | GGGAC | 5 cut(s) | 805, 958, 1105, 1252, 1393 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 635, 1314, 1461, 1605 |
| BsmAI | GTCTC | 3 cut(s) | 98, 602, 672 |
| BsmFI | GGGAC | 5 cut(s) | 805, 958, 1105, 1252, 1393 |
| BsnI | GGCC | 7 cut(s) | 5, 690, 998, 1145, 1286, 1433, 1577 |
| Bsp119I | TTCGAA | 1 cut(s) | 703 |
| Bsp13I | TCCGGA | 2 cut(s) | 1019, 1454 |
| Bsp143I | GATC | 1 cut(s) | 1252 |
| BspACI | CCGC | 5 cut(s) | 446, 580, 1028, 1322, 1613 |
| BspANI | GGCC | 7 cut(s) | 5, 690, 998, 1145, 1286, 1433, 1577 |
| BspCNI | CTCAG | 4 cut(s) | 460, 511, 562, 686 |
| BspEI | TCCGGA | 2 cut(s) | 1019, 1454 |
| BspHI | TCATGA | 4 cut(s) | 127, 289, 808, 1384 |
| BspLI | GGNNCC | 4 cut(s) | 534, 861, 873, 1254 |
| BspMI | ACCTGC | 1 cut(s) | 1693 |
| BspPI | GGATC | 2 cut(s) | 1247, 1260 |
| BspT104I | TTCGAA | 1 cut(s) | 703 |
| BsrI | ACTGG | 4 cut(s) | 55, 95, 301, 536 |
| BssMI | GATC | 1 cut(s) | 1252 |
| BssSI | CACGAG | 1 cut(s) | 236 |
| BssT1I | CCWWGG | 3 cut(s) | 855, 993, 999 |
| Bst2BI | CACGAG | 1 cut(s) | 236 |
| Bst2UI | CCWGG | 3 cut(s) | 384, 864, 878 |
| Bst4CI | ACNGT | 3 cut(s) | 151, 412, 559 |
| Bst6I | CTCTTC | 3 cut(s) | 600, 644, 1146 |
| BstBI | TTCGAA | 1 cut(s) | 703 |
| BstC8I | GCNNGC | 1 cut(s) | 582 |
| BstDEI | CTNAG | 5 cut(s) | 249, 468, 519, 549, 673 |
| BstDSI | CCRYGG | 2 cut(s) | 1281, 1572 |
| BstEII | GGTNACC | 1 cut(s) | 1594 |
| BstF5I | GGATG | 1 cut(s) | 790 |
| BstKTI | GATC | 1 cut(s) | 1255 |
| BstMAI | GTCTC | 3 cut(s) | 98, 602, 672 |
| BstMBI | GATC | 1 cut(s) | 1252 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 230, 488, 497, 1292, 1439, 1583, 1610 |
| BstNI | CCWGG | 3 cut(s) | 384, 864, 878 |
| BstPI | GGTNACC | 1 cut(s) | 1594 |
| BstSCI | CCNGG | 3 cut(s) | 382, 862, 876 |
| BstSFI | CTRYAG | 5 cut(s) | 411, 1061, 1208, 1349, 1496 |
| BstV1I | GCAGC | 3 cut(s) | 208, 430, 1037 |
| BstV2I | GAAGAC | 1 cut(s) | 1236 |
| BstX2I | RGATCY | 1 cut(s) | 1252 |
| BstYI | RGATCY | 1 cut(s) | 1252 |
| BsuI | GTATCC | 1 cut(s) | 1315 |
| BsuRI | GGCC | 7 cut(s) | 5, 690, 998, 1145, 1286, 1433, 1577 |
| BtgI | CCRYGG | 2 cut(s) | 1281, 1572 |
| BtsCI | GGATG | 1 cut(s) | 790 |
| BtsIMutI | CAGTG | 2 cut(s) | 368, 564 |
| BveI | ACCTGC | 1 cut(s) | 1693 |
| Cac8I | GCNNGC | 1 cut(s) | 582 |
| CaiI | CAGNNNCTG | 1 cut(s) | 224 |
| CciI | TCATGA | 4 cut(s) | 127, 289, 808, 1384 |
| Cfr13I | GGNCC | 2 cut(s) | 119, 688 |
| CsiI | ACCWGGT | 1 cut(s) | 862 |
| Csp6I | GTAC | 1 cut(s) | 408 |
| CviQI | GTAC | 1 cut(s) | 408 |
| DdeI | CTNAG | 5 cut(s) | 249, 468, 519, 549, 673 |
| DpnI | GATC | 1 cut(s) | 1254 |
| DpnII | GATC | 1 cut(s) | 1252 |
| DriI | GACNNNNNGTC | 1 cut(s) | 817 |
| EaeI | YGGCCR | 6 cut(s) | 3, 996, 1143, 1284, 1431, 1575 |
| Eam1104I | CTCTTC | 3 cut(s) | 600, 644, 1146 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 817 |
| EarI | CTCTTC | 3 cut(s) | 600, 644, 1146 |
| Eco130I | CCWWGG | 3 cut(s) | 855, 993, 999 |
| Eco32I | GATATC | 1 cut(s) | 262 |
| Eco47I | GGWCC | 1 cut(s) | 119 |
| Eco57I | CTGAAG | 2 cut(s) | 246, 624 |
| Eco91I | GGTNACC | 1 cut(s) | 1594 |
| EcoO109I | RGGNCCY | 1 cut(s) | 119 |
| EcoO65I | GGTNACC | 1 cut(s) | 1594 |
| EcoRI | GAATTC | 1 cut(s) | 426 |
| EcoRII | CCWGG | 3 cut(s) | 382, 862, 876 |
| EcoRV | GATATC | 1 cut(s) | 262 |
| EcoT14I | CCWWGG | 3 cut(s) | 855, 993, 999 |
| ErhI | CCWWGG | 3 cut(s) | 855, 993, 999 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 641, 673 |
| FaqI | GGGAC | 5 cut(s) | 805, 958, 1105, 1252, 1393 |
| FauI | CCCGC | 1 cut(s) | 573 |
| FauNDI | CATATG | 1 cut(s) | 976 |
| Fnu4HI | GCNGC | 4 cut(s) | 222, 444, 447, 1026 |
| FokI | GGATG | 1 cut(s) | 797 |
| Fsp4HI | GCNGC | 4 cut(s) | 222, 444, 447, 1026 |
| FspBI | CTAG | 1 cut(s) | 483 |
| GluI | GCNGC | 4 cut(s) | 222, 444, 447, 1026 |
| GsuI | CTGGAG | 3 cut(s) | 366, 1188, 1327 |
| HaeIII | GGCC | 7 cut(s) | 5, 690, 998, 1145, 1286, 1433, 1577 |
| HapII | CCGG | 3 cut(s) | 505, 1020, 1455 |
| HincII | GTYRAC | 3 cut(s) | 160, 555, 912 |
| HindII | GTYRAC | 3 cut(s) | 160, 555, 912 |
| HpaI | GTTAAC | 2 cut(s) | 160, 555 |
| HpaII | CCGG | 3 cut(s) | 505, 1020, 1455 |
| HphI | GGTGA | 3 cut(s) | 269, 725, 1606 |
| Hpy166II | GTNNAC | 4 cut(s) | 147, 160, 555, 912 |
| Hpy188I | TCNGA | 5 cut(s) | 170, 520, 604, 1636, 1677 |
| Hpy8I | GTNNAC | 4 cut(s) | 147, 160, 555, 912 |
| Hpy99I | CGWCG | 2 cut(s) | 1085, 1373 |
| HpyAV | CCTTC | 4 cut(s) | 8, 110, 132, 144 |
| HpyCH4III | ACNGT | 3 cut(s) | 151, 412, 559 |
| HpyCH4IV | ACGT | 1 cut(s) | 848 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 230, 488, 497, 1292, 1439, 1583, 1610 |
| HpyF3I | CTNAG | 5 cut(s) | 249, 468, 519, 549, 673 |
| HpySE526I | ACGT | 1 cut(s) | 848 |
| Kpn2I | TCCGGA | 2 cut(s) | 1019, 1454 |
| KspAI | GTTAAC | 2 cut(s) | 160, 555 |
| Kzo9I | GATC | 1 cut(s) | 1252 |
| LmnI | GCTCC | 8 cut(s) | 440, 758, 959, 1022, 1169, 1394, 1457, 1538 |
| Lsp1109I | GCAGC | 3 cut(s) | 208, 430, 1037 |
| LweI | GCATC | 1 cut(s) | 775 |
| MabI | ACCWGGT | 1 cut(s) | 862 |
| MaeI | CTAG | 1 cut(s) | 483 |
| MaeII | ACGT | 1 cut(s) | 848 |
| MaeIII | GTNAC | 5 cut(s) | 57, 713, 793, 1564, 1594 |
| MalI | GATC | 1 cut(s) | 1254 |
| MboI | GATC | 1 cut(s) | 1252 |
| MboII | GAAGA | 6 cut(s) | 346, 386, 617, 661, 1163, 1241 |
| MflI | RGATCY | 1 cut(s) | 1252 |
| MlsI | TGGCCA | 2 cut(s) | 5, 998 |
| MluNI | TGGCCA | 2 cut(s) | 5, 998 |
| MmeI | TCCRAC | 5 cut(s) | 418, 1080, 1227, 1515, 1659 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 998 |
| MroI | TCCGGA | 2 cut(s) | 1019, 1454 |
| MroXI | GAANNNNTTC | 1 cut(s) | 18 |
| MscI | TGGCCA | 2 cut(s) | 5, 998 |
| MseI | TTAA | 7 cut(s) | 141, 159, 554, 645, 774, 882, 1133 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 998 |
| MspA1I | CMGCKG | 2 cut(s) | 221, 1028 |
| MspI | CCGG | 3 cut(s) | 505, 1020, 1455 |
| MspR9I | CCNGG | 3 cut(s) | 384, 864, 878 |
| MvaI | CCWGG | 3 cut(s) | 384, 864, 878 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 230, 488, 497, 1292, 1439, 1583, 1610 |
| NdeI | CATATG | 1 cut(s) | 976 |
| NdeII | GATC | 1 cut(s) | 1252 |
| NlaIV | GGNNCC | 4 cut(s) | 534, 861, 873, 1254 |
| NmeAIII | GCCGAG | 4 cut(s) | 1171, 1312, 1459, 1603 |
| NmuCI | GTSAC | 2 cut(s) | 713, 1594 |
| NspV | TTCGAA | 1 cut(s) | 703 |
| PagI | TCATGA | 4 cut(s) | 127, 289, 808, 1384 |
| PaqCI | CACCTGC | 1 cut(s) | 1693 |
| PdmI | GAANNNNTTC | 1 cut(s) | 18 |
| PfeI | GAWTC | 4 cut(s) | 176, 587, 841, 1694 |
| PkrI | GCNGC | 4 cut(s) | 223, 445, 448, 1027 |
| PpuMI | RGGWCCY | 1 cut(s) | 119 |
| Psp5II | RGGWCCY | 1 cut(s) | 119 |
| Psp6I | CCWGG | 3 cut(s) | 382, 862, 876 |
| PspEI | GGTNACC | 1 cut(s) | 1594 |
| PspGI | CCWGG | 3 cut(s) | 382, 862, 876 |
| PspN4I | GGNNCC | 4 cut(s) | 534, 861, 873, 1254 |
| PspPI | GGNCC | 2 cut(s) | 119, 688 |
| PspPPI | RGGWCCY | 1 cut(s) | 119 |
| PstNI | CAGNNNCTG | 1 cut(s) | 224 |
| PsuI | RGATCY | 1 cut(s) | 1252 |
| PvuII | CAGCTG | 1 cut(s) | 221 |
| RsaI | GTAC | 1 cut(s) | 409 |
| RsaNI | GTAC | 1 cut(s) | 408 |
| SaqAI | TTAA | 7 cut(s) | 141, 159, 554, 645, 774, 882, 1133 |
| SatI | GCNGC | 4 cut(s) | 222, 444, 447, 1026 |
| Sau3AI | GATC | 1 cut(s) | 1252 |
| Sau96I | GGNCC | 2 cut(s) | 119, 688 |
| ScrFI | CCNGG | 3 cut(s) | 384, 864, 878 |
| SexAI | ACCWGGT | 1 cut(s) | 862 |
| SfaNI | GCATC | 1 cut(s) | 775 |
| SfcI | CTRYAG | 5 cut(s) | 411, 1061, 1208, 1349, 1496 |
| SfuI | TTCGAA | 1 cut(s) | 703 |
| SinI | GGWCC | 1 cut(s) | 119 |
| SmlI | CTYRAG | 1 cut(s) | 696 |
| SmoI | CTYRAG | 1 cut(s) | 696 |
| SsiI | CCGC | 5 cut(s) | 446, 580, 1028, 1322, 1613 |
| SspMI | CTAG | 1 cut(s) | 483 |
| StyD4I | CCNGG | 3 cut(s) | 382, 862, 876 |
| StyI | CCWWGG | 3 cut(s) | 855, 993, 999 |
| TaaI | ACNGT | 3 cut(s) | 151, 412, 559 |
| TaiI | ACGT | 1 cut(s) | 851 |
| TaqI | TCGA | 3 cut(s) | 640, 703, 815 |
| TatI | WGTACW | 1 cut(s) | 407 |
| TauI | GCSGC | 1 cut(s) | 449 |
| TfiI | GAWTC | 4 cut(s) | 176, 587, 841, 1694 |
| Tru1I | TTAA | 7 cut(s) | 141, 159, 554, 645, 774, 882, 1133 |
| Tru9I | TTAA | 7 cut(s) | 141, 159, 554, 645, 774, 882, 1133 |
| TscAI | CASTG | 2 cut(s) | 368, 564 |
| TseFI | GTSAC | 2 cut(s) | 713, 1594 |
| TseI | GCWGC | 3 cut(s) | 221, 443, 1025 |
| Tsp45I | GTSAC | 2 cut(s) | 713, 1594 |
| TspDTI | ATGAA | 9 cut(s) | 278, 306, 353, 393, 963, 1110, 1251, 1542, 1707 |
| TspGWI | ACGGA | 2 cut(s) | 1270, 1561 |
| TspRI | CASTG | 2 cut(s) | 368, 564 |
| VpaK11BI | GGWCC | 1 cut(s) | 119 |
| XapI | RAATTY | 2 cut(s) | 426, 1129 |
| XmnI | GAANNNNTTC | 1 cut(s) | 18 |
| XspI | CTAG | 1 cut(s) | 483 |