Rorug07G0295700

Double-stranded RNA-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0004669
Physical Location & Seq
Reverse (-)
29071738 .. 29076970
5233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0295700.1

Sequence Viewer

Length: 1857 bp
ATGGATTCCGACTACGGCATTCCCCGAGAGCTCTCCGCCGTCCAGAAGCTCCGATCTCAATACCAGCCGGAGCTTCCTCCTTGCCTCCAGGGAACTACTGTAAGAGTTGAATTTGGGGACACAACAACAGCTGCAGACCCCACAGATGCCCATACCATTGCTCGATACTTTCCACACACTTATGGTCAGCCTTTGTCTCACTTTCTCAGGGCAACTGCAAAAGTTGCTGGTGCTCAGGTTATTACTGAGCATCCAGCTATGAGGGTCGGAATTGTCTTTTGTGGGAGACAATCTCCTGGAGGACACAATGTCATCTGGGGCCTTCTCAAGGCTCTCAAAATTCATAACCCCAAAAGTACCTTAATTGGGTTTTTGGGTGGTTCTGAAGGTTTATTTGCACAAAAAACTCTTGAGATAACAGATGATGTTCTTGCCACCTACAAAAATCAAGGTGGTTATGATTTGCTTGGACGGACAAGGGATCAAATTAGAACAAAGGAGCAAGTCAACGCTACGTTAGCTGCATGCAATGCTATGAAGTTGGATGGCCTTGTCATAATTGGAGGGGTGACATCAAACACCGATGCCGCCCAGCTTGCAGAGACATTCGCTGAAGCAAAATGCCAGACAAAGGTGGTTGGGGTTCCTGTCACTATGAACGGAGACCTTAAGAACCAGTTTGTGGAAGCTAATGTTGGTTTTGATACAGTGTGCAAGGTCAATTCCCAGCTCATCAGCAATATGTGCACAGATGCTCTTTCTGCTGAAAAGTATTATTATTTCATTCGACTTATGGGCCGGAAGGCATCACATGTTGCCTTGGAGTGCACCCTTCAATCTCATCCAAACTTGGTAATTCTTGGTGAGGAGGTGGCTGCATCCAAGCTAACGCTTTTTGACATTACAACCCGAATCTGTGATGCAGTCCAAGATCGTGCCACACAAGAGAAGAATCATGGTGTCATCCTATTACCAGAAGGACTCATAGAAAGCATTCCTGAAGTGTATGCCCTCTTGAAGGAAATTCATGGTTTGTATAGGCAAGGAGTTTCTGCCGATAATATTTCTTCTCAACTCTCACTGTGGGCTTCTGCTCTATTTGAATTTTTGCCGCATTTTATCAAGAAACAGCTGCTTCTTTTGCCTGAATCAGATGACTCTGCACAGTTATCTCAGATTGAGACAGAGAAACTTTTTGCACATCTTGTGGAGGTCGAGATGAACAAGCGCCAGAAAGAAGGCACATACAAGGGGAAGAAGTTTAATGCTATCTGCCACTTTTTCGGTTATCAGGCTCGGGGGTCTTTACCATCAAAATTCGATTGTGACTATGCCTATGTTCTAGGGCACATCTGCTACCACATTCTTGCTGCTGGTTTGAATGGTTACATGGCAACTATAACTAACCTGAAAAATCCATTGAACAAGTGGCGTTGTGGCGCTGCTCCACTTACGGCAATGATGACTGTGAAGCGCTGGTCTCAAAATCCTGGGTCTACTGCATCTATTGGAAAACCTGGCATTTTTCCAGCTACCGTAGATTTGAAGGGCAAAGCATACGAGCTGTTGAGAAAAAATGCTACAAAATTCCTGCTGGATGATATCTACAGAAATCCTGGGCCTCTTCAATTTGAAGGTCCTGGTGCCGATTCCAAGGCTGTAACACTGTGCGTTGAAGACCAGGATTACATGGGGCGCATCAAGAAATTGCAGGAATATCTTGACCAGATTCGAACCATTGTAAAGCCTGGGTGCTCACAGGAGGTTCTGAAAGCAGCTTTGAGTGTCATGGGCTCTGTAACAGAAGTCCTAACTGTTATGTCTTCATCTTCTTCGAATGCCCCGTCATCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006379 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009737 GO:0009892 GO:0009954 GO:0009987 GO:0010033 GO:0010051 GO:0010267 GO:0010305 GO:0010445 GO:0010467 GO:0010468 GO:0010589 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0031974 GO:0031981 GO:0032296 GO:0032501 GO:0032502 GO:0033993 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0035198 GO:0035279 GO:0040029 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097305 GO:0098795 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
dsrm

Protein Analysis

618

Amino Acids

67.67

Weight (kDa)

7.85

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PFK PF00365 88 - 399 1.7e-27 Phosphofructokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1643
AccB7I CCANNNNNTGG 1 cut(s) 682
AccI GTMKAC 1 cut(s) 1496
AciI CCGC 3 cut(s) 36, 588, 1112
AclWI GGATC 1 cut(s) 489
AcsI RAATTY 6 cut(s) 110, 339, 1023, 1103, 1316, 1586
AcuI CTGAAG 3 cut(s) 405, 633, 1020
AfaI GTAC 1 cut(s) 358
AfeI AGCGCT 1 cut(s) 1475
AfiI CCNNNNNNNGG 5 cut(s) 328, 366, 631, 682, 1018
AflII CTTAAG 1 cut(s) 668
AflIII ACRYGT 1 cut(s) 811
AhdI GACNNNNNGTC 1 cut(s) 308
AjnI CCWGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
Alw21I GWGCWC 5 cut(s) 33, 235, 749, 830, 1757
Alw26I GTCTC 6 cut(s) 201, 280, 596, 657, 1175, 1485
Alw44I GTGCAC 2 cut(s) 745, 826
AlwI GGATC 1 cut(s) 489
Ama87I CYCGRG 2 cut(s) 24, 1296
Aor51HI AGCGCT 1 cut(s) 1475
AoxI GGCC 4 cut(s) 319, 547, 796, 1619
ApaLI GTGCAC 2 cut(s) 745, 826
ApeKI GCWGC 7 cut(s) 131, 521, 875, 1132, 1370, 1442, 1775
ApoI RAATTY 6 cut(s) 110, 339, 1023, 1103, 1316, 1586
ArsI GACNNNNNNTTYG 1 cut(s) 1829
Asp700I GAANNNNTTC 1 cut(s) 993
AspLEI GCGC 4 cut(s) 1230, 1442, 1476, 1698
AspS9I GGNCC 4 cut(s) 319, 796, 1619, 1637
AsuHPI GGTGA 2 cut(s) 580, 875
AsuII TTCGAA 2 cut(s) 1732, 1835
AvaI CYCGRG 2 cut(s) 24, 1296
AvaII GGWCC 1 cut(s) 1637
BaeGI GKGCMC 3 cut(s) 749, 830, 1350
BanI GGYRCC 1 cut(s) 1643
BanII GRGCYC 2 cut(s) 33, 1796
BbsI GAAGAC 2 cut(s) 1683, 1815
Bbv12I GWGCWC 5 cut(s) 33, 235, 749, 830, 1757
BbvI GCAGC 7 cut(s) 118, 508, 862, 1119, 1357, 1429, 1787
BccI CCATC 2 cut(s) 539, 1318
BceAI ACGGC 3 cut(s) 23, 31, 1470
BciT130I CCWGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
BcoDI GTCTC 6 cut(s) 201, 280, 596, 657, 1175, 1485
BfaI CTAG 1 cut(s) 1343
BfmI CTRYAG 2 cut(s) 132, 1606
BfoI RGCGCY 3 cut(s) 1231, 1443, 1477
BfrI CTTAAG 1 cut(s) 668
BisI GCNGC 9 cut(s) 132, 522, 588, 876, 1112, 1133, 1371, 1443, 1776
BlsI GCNGC 9 cut(s) 133, 523, 589, 877, 1113, 1134, 1372, 1444, 1777
Bme1390I CCNGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
Bme18I GGWCC 1 cut(s) 1637
BmeRI GACNNNNNGTC 1 cut(s) 308
BmeT110I CYCGRG 2 cut(s) 24, 1296
BmgT120I GGNCC 4 cut(s) 319, 796, 1619, 1637
BmiI GGNNCC 3 cut(s) 320, 645, 1645
BmrFI CCNGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
BmsI GCATC 9 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511, 1707
BpiI GAAGAC 2 cut(s) 1683, 1815
BplI GAGNNNNNCTC 2 cut(s) 277, 309
BpmI CTGGAG 2 cut(s) 71, 318
Bpu10I CCTNAGC 1 cut(s) 234
Bpu14I TTCGAA 2 cut(s) 1732, 1835
BpuEI CTTGAG 2 cut(s) 311, 431
BsaI GGTCTC 2 cut(s) 657, 1485
BsaJI CCNNGG 6 cut(s) 88, 819, 1490, 1616, 1653, 1748
Bsc4I CCNNNNNNNGG 5 cut(s) 328, 366, 631, 682, 1018
Bse1I ACTGG 1 cut(s) 676
Bse3DI GCAATG 3 cut(s) 156, 535, 1464
BseBI CCWGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
BseDI CCNNGG 6 cut(s) 88, 819, 1490, 1616, 1653, 1748
BseGI GGATG 6 cut(s) 250, 550, 841, 878, 963, 1603
BseLI CCNNNNNNNGG 5 cut(s) 328, 366, 631, 682, 1018
BseMI GCAATG 3 cut(s) 156, 535, 1464
BseMII CTCAG 4 cut(s) 220, 237, 248, 1187
BseNI ACTGG 1 cut(s) 676
BseRI GAGGAG 1 cut(s) 881
BseSI GKGCMC 3 cut(s) 749, 830, 1350
BseXI GCAGC 7 cut(s) 118, 508, 862, 1119, 1357, 1429, 1787
BseYI CCCAGC 2 cut(s) 591, 726
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 4 cut(s) 321, 549, 798, 1621
BshNI GGYRCC 1 cut(s) 1643
BsiHKAI GWGCWC 5 cut(s) 33, 235, 749, 830, 1757
BsiHKCI CYCGRG 2 cut(s) 24, 1296
BsiSI CCGG 2 cut(s) 68, 799
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 5 cut(s) 328, 366, 631, 682, 1018
BsmAI GTCTC 6 cut(s) 201, 280, 596, 657, 1175, 1485
BsmFI GGGAC 1 cut(s) 131
BsmI GAATGC 3 cut(s) 18, 993, 1843
BsnI GGCC 4 cut(s) 321, 549, 798, 1621
Bso31I GGTCTC 2 cut(s) 657, 1485
BsoBI CYCGRG 2 cut(s) 24, 1296
Bsp119I TTCGAA 2 cut(s) 1732, 1835
Bsp1286I GDGCHC 7 cut(s) 33, 235, 749, 830, 1350, 1757, 1796
Bsp143I GATC 3 cut(s) 53, 481, 931
BspACI CCGC 3 cut(s) 36, 588, 1112
BspANI GGCC 4 cut(s) 321, 549, 798, 1621
BspCNI CTCAG 4 cut(s) 219, 238, 247, 1186
BspLI GGNNCC 3 cut(s) 320, 645, 1645
BspMAI CTGCAG 1 cut(s) 136
BspPI GGATC 1 cut(s) 489
BspT104I TTCGAA 2 cut(s) 1732, 1835
BspT107I GGYRCC 1 cut(s) 1643
BspTI CTTAAG 1 cut(s) 668
BspTNI GGTCTC 2 cut(s) 657, 1485
BsrDI GCAATG 3 cut(s) 156, 535, 1464
BsrI ACTGG 1 cut(s) 676
BssECI CCNNGG 6 cut(s) 88, 819, 1490, 1616, 1653, 1748
BssMI GATC 3 cut(s) 53, 481, 931
BssT1I CCWWGG 2 cut(s) 819, 1653
Bst2UI CCWGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
Bst4CI ACNGT 8 cut(s) 100, 709, 1083, 1167, 1468, 1537, 1668, 1816
Bst6I CTCTTC 1 cut(s) 1629
BstAFI CTTAAG 1 cut(s) 668
BstAPI GCANNNNNTGC 3 cut(s) 224, 530, 744
BstBI TTCGAA 2 cut(s) 1732, 1835
BstC8I GCNNGC 2 cut(s) 526, 597
BstDEI CTNAG 4 cut(s) 206, 234, 246, 1173
BstENI CCTNNNNNAGG 2 cut(s) 326, 1016
BstF5I GGATG 6 cut(s) 250, 550, 841, 878, 963, 1603
BstH2I RGCGCY 3 cut(s) 1231, 1443, 1477
BstHHI GCGC 4 cut(s) 1230, 1442, 1476, 1698
BstKTI GATC 3 cut(s) 56, 484, 934
BstMAI GTCTC 6 cut(s) 201, 280, 596, 657, 1175, 1485
BstMBI GATC 3 cut(s) 53, 481, 931
BstMWI GCNNNNNNNGC 7 cut(s) 224, 518, 530, 596, 744, 761, 1141
BstNI CCWGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
BstNSI RCATGY 2 cut(s) 528, 815
BstSCI CCNGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
BstSFI CTRYAG 2 cut(s) 132, 1606
BstSLI GKGCMC 3 cut(s) 749, 830, 1350
BstV1I GCAGC 7 cut(s) 118, 508, 862, 1119, 1357, 1429, 1787
BstV2I GAAGAC 2 cut(s) 1683, 1815
BsuRI GGCC 4 cut(s) 321, 549, 798, 1621
BtsCI GGATG 6 cut(s) 250, 550, 841, 878, 963, 1603
BtsIMutI CAGTG 3 cut(s) 714, 1079, 1664
Cac8I GCNNGC 2 cut(s) 526, 597
CfoI GCGC 4 cut(s) 1230, 1442, 1476, 1698
Cfr13I GGNCC 4 cut(s) 319, 796, 1619, 1637
Csp6I GTAC 1 cut(s) 357
CviAII CATG 7 cut(s) 525, 812, 956, 1028, 1390, 1690, 1789
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 4 cut(s) 206, 234, 246, 1173
DpnI GATC 3 cut(s) 55, 483, 933
DpnII GATC 3 cut(s) 53, 481, 931
DriI GACNNNNNGTC 1 cut(s) 308
Eam1104I CTCTTC 1 cut(s) 1629
Eam1105I GACNNNNNGTC 1 cut(s) 308
EarI CTCTTC 1 cut(s) 1629
EciI GGCGGA 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 31
Eco130I CCWWGG 2 cut(s) 819, 1653
Eco24I GRGCYC 2 cut(s) 33, 1796
Eco31I GGTCTC 2 cut(s) 657, 1485
Eco32I GATATC 1 cut(s) 1603
Eco47I GGWCC 1 cut(s) 1637
Eco47III AGCGCT 1 cut(s) 1475
Eco53kI GAGCTC 1 cut(s) 31
Eco57I CTGAAG 3 cut(s) 405, 633, 1020
Eco88I CYCGRG 2 cut(s) 24, 1296
EcoICRI GAGCTC 1 cut(s) 31
EcoNI CCTNNNNNAGG 2 cut(s) 326, 1016
EcoO109I RGGNCCY 2 cut(s) 319, 1637
EcoRII CCWGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
EcoRV GATATC 1 cut(s) 1603
EcoT14I CCWWGG 2 cut(s) 819, 1653
EcoT38I GRGCYC 2 cut(s) 33, 1796
ErhI CCWWGG 2 cut(s) 819, 1653
FaeI CATG 7 cut(s) 528, 815, 959, 1031, 1393, 1693, 1792
FaqI GGGAC 1 cut(s) 131
FatI CATG 7 cut(s) 524, 811, 955, 1027, 1389, 1689, 1788
FblI GTMKAC 1 cut(s) 1496
Fnu4HI GCNGC 9 cut(s) 132, 522, 588, 876, 1112, 1133, 1371, 1443, 1776
FokI GGATG 6 cut(s) 237, 557, 828, 865, 950, 1610
FriOI GRGCYC 2 cut(s) 33, 1796
Fsp4HI GCNGC 9 cut(s) 132, 522, 588, 876, 1112, 1133, 1371, 1443, 1776
FspBI CTAG 1 cut(s) 1343
GlaI GCGC 4 cut(s) 1229, 1441, 1475, 1697
GluI GCNGC 9 cut(s) 132, 522, 588, 876, 1112, 1133, 1371, 1443, 1776
GsaI CCCAGC 2 cut(s) 595, 730
GsuI CTGGAG 2 cut(s) 71, 318
HaeII RGCGCY 3 cut(s) 1231, 1443, 1477
HaeIII GGCC 4 cut(s) 321, 549, 798, 1621
HapII CCGG 2 cut(s) 68, 799
HhaI GCGC 4 cut(s) 1230, 1442, 1476, 1698
Hin1II CATG 7 cut(s) 528, 815, 959, 1031, 1393, 1693, 1792
Hin6I GCGC 4 cut(s) 1228, 1440, 1474, 1696
HinP1I GCGC 4 cut(s) 1228, 1440, 1474, 1696
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HinfI GANTC 8 cut(s) 5, 912, 952, 981, 1148, 1157, 1649, 1729
HpaII CCGG 2 cut(s) 68, 799
HphI GGTGA 2 cut(s) 580, 875
Hpy166II GTNNAC 4 cut(s) 508, 747, 828, 1497
Hpy188I TCNGA 7 cut(s) 10, 53, 269, 385, 1153, 1176, 1770
Hpy188III TCNNGA 8 cut(s) 43, 410, 998, 1015, 1123, 1216, 1702, 1721
Hpy8I GTNNAC 4 cut(s) 508, 747, 828, 1497
HpyAV CCTTC 9 cut(s) 332, 380, 796, 842, 971, 1012, 1232, 1540, 1628
HpyCH4III ACNGT 8 cut(s) 100, 709, 1083, 1167, 1468, 1537, 1668, 1816
HpyCH4IV ACGT 1 cut(s) 515
HpyF10VI GCNNNNNNNGC 7 cut(s) 224, 518, 530, 596, 744, 761, 1141
HpyF3I CTNAG 4 cut(s) 206, 234, 246, 1173
HpySE526I ACGT 1 cut(s) 515
Hsp92II CATG 7 cut(s) 528, 815, 959, 1031, 1393, 1693, 1792
HspAI GCGC 4 cut(s) 1228, 1440, 1474, 1696
Kzo9I GATC 3 cut(s) 53, 481, 931
LmnI GCTCC 4 cut(s) 54, 70, 499, 1450
Lsp1109I GCAGC 7 cut(s) 118, 508, 862, 1119, 1357, 1429, 1787
LweI GCATC 9 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511, 1707
MaeI CTAG 1 cut(s) 1343
MaeII ACGT 1 cut(s) 515
MaeIII GTNAC 6 cut(s) 568, 649, 1325, 1385, 1660, 1798
MalI GATC 3 cut(s) 55, 483, 933
MboI GATC 3 cut(s) 53, 481, 931
MboII GAAGA 8 cut(s) 961, 1059, 1267, 1616, 1688, 1815, 1821, 1824
MhlI GDGCHC 7 cut(s) 33, 235, 749, 830, 1350, 1757, 1796
MlyI GAGTC 2 cut(s) 975, 1151
MmeI TCCRAC 3 cut(s) 33, 247, 522
MroXI GAANNNNTTC 1 cut(s) 993
MseI TTAA 4 cut(s) 362, 669, 1263, 1855
MslI CAYNNNNRTG 1 cut(s) 180
MspA1I CMGCKG 2 cut(s) 131, 1132
MspCI CTTAAG 1 cut(s) 668
MspI CCGG 2 cut(s) 68, 799
MspR9I CCNGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
Mva1269I GAATGC 3 cut(s) 18, 993, 1843
MvaI CCWGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
MwoI GCNNNNNNNGC 7 cut(s) 224, 518, 530, 596, 744, 761, 1141
NdeII GATC 3 cut(s) 53, 481, 931
NlaIII CATG 7 cut(s) 528, 815, 959, 1031, 1393, 1693, 1792
NlaIV GGNNCC 3 cut(s) 320, 645, 1645
NmuCI GTSAC 3 cut(s) 568, 649, 1325
NspI RCATGY 2 cut(s) 528, 815
NspV TTCGAA 2 cut(s) 1732, 1835
PaeI GCATGC 1 cut(s) 528
PciI ACATGT 1 cut(s) 811
PcsI WCGNNNNNNNCGW 1 cut(s) 1841
PctI GAATGC 3 cut(s) 18, 993, 1843
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 6 cut(s) 5, 912, 952, 1148, 1649, 1729
PflMI CCANNNNNTGG 1 cut(s) 682
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 9 cut(s) 133, 523, 589, 877, 1113, 1134, 1372, 1444, 1777
PleI GAGTC 2 cut(s) 975, 1151
PpsI GAGTC 2 cut(s) 975, 1151
PpuMI RGGWCCY 1 cut(s) 1637
PscI ACATGT 1 cut(s) 811
Psp124BI GAGCTC 1 cut(s) 33
Psp5II RGGWCCY 1 cut(s) 1637
Psp6I CCWGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
PspFI CCCAGC 2 cut(s) 591, 726
PspGI CCWGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
PspN4I GGNNCC 3 cut(s) 320, 645, 1645
PspPI GGNCC 4 cut(s) 319, 796, 1619, 1637
PspPPI RGGWCCY 1 cut(s) 1637
PstI CTGCAG 1 cut(s) 136
PvuII CAGCTG 2 cut(s) 131, 1132
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 1 cut(s) 180
SacI GAGCTC 1 cut(s) 33
SaqAI TTAA 4 cut(s) 362, 669, 1263, 1855
SatI GCNGC 9 cut(s) 132, 522, 588, 876, 1112, 1133, 1371, 1443, 1776
Sau3AI GATC 3 cut(s) 53, 481, 931
Sau96I GGNCC 4 cut(s) 319, 796, 1619, 1637
SchI GAGTC 2 cut(s) 975, 1151
ScrFI CCNGG 8 cut(s) 89, 297, 1491, 1518, 1617, 1641, 1682, 1749
SduI GDGCHC 7 cut(s) 33, 235, 749, 830, 1350, 1757, 1796
SfaNI GCATC 9 cut(s) 136, 259, 574, 742, 815, 887, 910, 1511, 1707
SfcI CTRYAG 2 cut(s) 132, 1606
SfuI TTCGAA 2 cut(s) 1732, 1835
SinI GGWCC 1 cut(s) 1637
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 3 cut(s) 326, 410, 668
SmoI CTYRAG 3 cut(s) 326, 410, 668
SphI GCATGC 1 cut(s) 528
SsiI CCGC 3 cut(s) 36, 588, 1112
SspI AATATT 1 cut(s) 1063
SspMI CTAG 1 cut(s) 1343
SstI GAGCTC 1 cut(s) 33
StyD4I CCNGG 8 cut(s) 87, 295, 1489, 1516, 1615, 1639, 1680, 1747
StyI CCWWGG 2 cut(s) 819, 1653
TaaI ACNGT 8 cut(s) 100, 709, 1083, 1167, 1468, 1537, 1668, 1816
TaiI ACGT 1 cut(s) 518
TaqI TCGA 6 cut(s) 163, 787, 1215, 1320, 1732, 1835
TauI GCSGC 2 cut(s) 590, 1114
TfiI GAWTC 6 cut(s) 5, 912, 952, 1148, 1649, 1729
Tru1I TTAA 4 cut(s) 362, 669, 1263, 1855
Tru9I TTAA 4 cut(s) 362, 669, 1263, 1855
TscAI CASTG 3 cut(s) 714, 1086, 1671
TseFI GTSAC 3 cut(s) 568, 649, 1325
TseI GCWGC 7 cut(s) 131, 521, 875, 1132, 1370, 1442, 1775
Tsp45I GTSAC 3 cut(s) 568, 649, 1325
TspDTI ATGAA 7 cut(s) 332, 551, 671, 772, 1016, 1235, 1815
TspGWI ACGGA 2 cut(s) 487, 675
TspRI CASTG 3 cut(s) 714, 1086, 1671
Van91I CCANNNNNTGG 1 cut(s) 682
Vha464I CTTAAG 1 cut(s) 668
VneI GTGCAC 2 cut(s) 745, 826
VpaK11BI GGWCC 1 cut(s) 1637
XagI CCTNNNNNAGG 2 cut(s) 326, 1016
XapI RAATTY 6 cut(s) 110, 339, 1023, 1103, 1316, 1586
XceI RCATGY 2 cut(s) 528, 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 1425
XmiI GTMKAC 1 cut(s) 1496
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.