Prupe.1G554500_v2.0.a1

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0003834
Physical Location & Seq
Forward (+)
45284604 .. 45290309
5706 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G554500.1

Sequence Viewer

Length: 1209 bp
ATGGCCTTTCCTAGAACCCAAAAGTCCAAACCAGGACCCGGTTCCCCAATCATCTTCCTTGTCATCTGCATAGCCACCATTGCACTCCTCTTTCTCGTTTCCTCTCTCATTTCCACTAGTGAGTTCTCTTTATCCTCTCTGAAAACCCTCGAAAGCAGACTCAAAGTAAAGAATATAAACCAGAACCACCAAACTGGCCACGAGAAGTACCTCTACTGGGGTGACAGAATTGATTGCCCTGGAAAGCACTGCGAGTCCTGTGCGGGTCTGGGCCACCAGGAGTCCAGCCTCAGGTGTGCTCTGGAAGAGGCTATGTTCCTTCAGAGAACTTTTGTAATGCCTTCAAGAATGTGTATTAACCCAATACACAATAATAATGAGATCCTTCATCACTCACATAGTGCAATTTCAGAAGAAAGGTGGACAGCAAACTCCTGTTCCATGGACTCGTTGTATGATATAGACCTCATATCAGGCACTGTACCAGTAATTTTGGACAATTCAAAAATGTGGTATCGAGTGGTGGCAACAAGTATGAAGTTGGGAGGTAGAGGAGCTGCCCATGTGGAAGGAGGTACTCGTGTTGATCTCAGGGAGAACAGTAGTTTCTCAAATCTTTTACTCATAAACAGAACTGCAAGCCCTCTTGCATGGTTTATGGAGTGCAAGGATCGAAAAAATCGTAGTGCTATAATTTTGCCATATACCTTTCTCCCCTCGATGGCTGCTAAGAAGTTGAGGAATGCAGCTGACAAGATTAAGGCGCTCCTTGGAGATTATGATGCCATTCACGTACGTCGTGGTGATATAATTAAGACCAGGAAGGACAGATTTGGCGTTAACAGGACCCTGCATCCTCATGTGGACAGGGATACACACCCAGAGTTTATTCTTCGCAGAATTGAGAAATGGGTCCCATCTGGACGAACTCTTTTTATTGCTTCAAATGAGAGGACACCAGGATTTTTTTCACCTCTCTCAGTCAGATATAAGTTGGCGTATTCATCAAACTATAGCCACATATTGGAGCCCTTGATTGAGAATAACTACCAGTTGTTCATGATTGAAAGGATTATCATGATGGGTGCTAAAACATTCATCAACACATTCAAAGAAGGTGACACAGGTCTCAGTCTTACCGATGACCCAAAGAAGAACACCAAGTTATGGCAAATACCAGTCTATAGCTTCGATGAAGAGGGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

403

Amino Acids

45.6

Weight (kDa)

9.15

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1024, 1167
AciI CCGC 1 cut(s) 263
AclWI GGATC 2 cut(s) 376, 678
AcoI YGGCCR 1 cut(s) 196
AcuI CTGAAG 1 cut(s) 305
AdeI CACNNNGTG 1 cut(s) 401
AfaI GTAC 4 cut(s) 209, 483, 577, 795
AfiI CCNNNNNNNGG 6 cut(s) 38, 217, 291, 721, 1024, 1167
AgsI TTSAA 5 cut(s) 345, 504, 945, 1067, 1111
AhlI ACTAGT 1 cut(s) 116
AjnI CCWGG 5 cut(s) 31, 238, 276, 818, 958
AluBI AGCT 4 cut(s) 557, 749, 1188, 1206
AluI AGCT 4 cut(s) 557, 749, 1188, 1206
Alw21I GWGCWC 1 cut(s) 301
Alw26I GTCTC 1 cut(s) 1133
AlwI GGATC 2 cut(s) 376, 678
AlwNI CAGNNNCTG 1 cut(s) 479
AoxI GGCC 3 cut(s) 3, 196, 271
ApeKI GCWGC 3 cut(s) 557, 725, 746
AspLEI GCGC 1 cut(s) 766
AspS9I GGNCC 4 cut(s) 35, 271, 846, 913
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 4 cut(s) 233, 815, 963, 1130
AvaII GGWCC 3 cut(s) 35, 846, 913
AxyI CCTNAGG 1 cut(s) 290
BaeI ACNNNNGTAYC 2 cut(s) 567, 600
BalI TGGCCA 1 cut(s) 198
BanII GRGCYC 1 cut(s) 1032
BarI GAAGNNNNNNTAC 2 cut(s) 197, 229
BauI CACGAG 2 cut(s) 200, 579
Bbv12I GWGCWC 1 cut(s) 301
BbvI GCAGC 3 cut(s) 544, 712, 758
BccI CCATC 3 cut(s) 715, 925, 1075
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciT130I CCWGG 5 cut(s) 33, 240, 278, 820, 960
BciVI GTATCC 1 cut(s) 865
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 1133
BcuI ACTAGT 1 cut(s) 116
BfaI CTAG 2 cut(s) 12, 117
BfmI CTRYAG 2 cut(s) 1012, 1183
BfoI RGCGCY 1 cut(s) 767
BfuI GTATCC 1 cut(s) 865
BisI GCNGC 3 cut(s) 558, 726, 747
BlsI GCNGC 3 cut(s) 559, 727, 748
Bme1390I CCNGG 6 cut(s) 33, 39, 240, 278, 820, 960
Bme18I GGWCC 3 cut(s) 35, 846, 913
BmgT120I GGNCC 4 cut(s) 35, 271, 846, 913
BmiI GGNNCC 6 cut(s) 37, 43, 848, 914, 915, 1029
BmrFI CCNGG 6 cut(s) 33, 39, 240, 278, 820, 960
BmrI ACTGGG 1 cut(s) 226
BmsI GCATC 2 cut(s) 772, 862
BmuI ACTGGG 1 cut(s) 226
BoxI GACNNNNGTC 1 cut(s) 1125
BpuMI CCSGG 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 793
BsaI GGTCTC 1 cut(s) 1133
BsaJI CCNNGG 3 cut(s) 238, 441, 769
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 217, 291, 721, 1024, 1167
Bse1I ACTGG 5 cut(s) 199, 221, 485, 1051, 1178
Bse21I CCTNAGG 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 78
BseBI CCWGG 5 cut(s) 33, 240, 278, 820, 960
BseDI CCNNGG 3 cut(s) 238, 441, 769
BseGI GGATG 1 cut(s) 853
BseLI CCNNNNNNNGG 6 cut(s) 38, 217, 291, 721, 1024, 1167
BseMI GCAATG 1 cut(s) 78
BseMII CTCAG 4 cut(s) 304, 604, 993, 1144
BseNI ACTGG 5 cut(s) 199, 221, 485, 1051, 1178
BseRI GAGGAG 2 cut(s) 77, 567
BseXI GCAGC 3 cut(s) 544, 712, 758
BshFI GGCC 3 cut(s) 5, 198, 273
BsiHKAI GWGCWC 1 cut(s) 301
BsiSI CCGG 1 cut(s) 39
BsiWI CGTACG 1 cut(s) 793
BslFI GGGAC 1 cut(s) 899
BslI CCNNNNNNNGG 6 cut(s) 38, 217, 291, 721, 1024, 1167
BsmAI GTCTC 1 cut(s) 1133
BsmFI GGGAC 1 cut(s) 899
BsmI GAATGC 1 cut(s) 748
BsnI GGCC 3 cut(s) 5, 198, 273
Bso31I GGTCTC 1 cut(s) 1133
Bsp1286I GDGCHC 2 cut(s) 301, 1032
Bsp143I GATC 3 cut(s) 381, 586, 670
Bsp19I CCATGG 1 cut(s) 441
BspACI CCGC 1 cut(s) 263
BspANI GGCC 3 cut(s) 5, 198, 273
BspCNI CTCAG 4 cut(s) 303, 603, 992, 1143
BspHI TCATGA 2 cut(s) 1059, 1077
BspLI GGNNCC 6 cut(s) 37, 43, 848, 914, 915, 1029
BspPI GGATC 2 cut(s) 376, 678
BspTNI GGTCTC 1 cut(s) 1133
BsrDI GCAATG 1 cut(s) 78
BsrI ACTGG 5 cut(s) 199, 221, 485, 1051, 1178
BssECI CCNNGG 3 cut(s) 238, 441, 769
BssMI GATC 3 cut(s) 381, 586, 670
BssSI CACGAG 2 cut(s) 200, 579
BssT1I CCWWGG 2 cut(s) 441, 769
Bst2BI CACGAG 2 cut(s) 200, 579
Bst2UI CCWGG 5 cut(s) 33, 240, 278, 820, 960
Bst4CI ACNGT 2 cut(s) 481, 602
Bst6I CTCTTC 2 cut(s) 300, 1191
BstBAI YACGTR 1 cut(s) 793
BstC8I GCNNGC 1 cut(s) 640
BstDEI CTNAG 5 cut(s) 290, 590, 729, 979, 1130
BstDSI CCRYGG 1 cut(s) 441
BstF5I GGATG 1 cut(s) 853
BstH2I RGCGCY 1 cut(s) 767
BstHHI GCGC 1 cut(s) 766
BstKTI GATC 3 cut(s) 384, 589, 673
BstMAI GTCTC 1 cut(s) 1133
BstMBI GATC 3 cut(s) 381, 586, 670
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 5 cut(s) 33, 240, 278, 820, 960
BstPAI GACNNNNGTC 1 cut(s) 1125
BstSCI CCNGG 6 cut(s) 31, 37, 238, 276, 818, 958
BstSFI CTRYAG 2 cut(s) 1012, 1183
BstV1I GCAGC 3 cut(s) 544, 712, 758
BstX2I RGATCY 1 cut(s) 381
BstXI CCANNNNNNTGG 1 cut(s) 194
BstYI RGATCY 1 cut(s) 381
Bsu36I CCTNAGG 1 cut(s) 290
BsuI GTATCC 1 cut(s) 865
BsuRI GGCC 3 cut(s) 5, 198, 273
BtgI CCRYGG 1 cut(s) 441
BtsCI GGATG 1 cut(s) 853
BtsI GCAGTG 1 cut(s) 247
BtsIMutI CAGTG 2 cut(s) 247, 477
Cac8I GCNNGC 1 cut(s) 640
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 2 cut(s) 1059, 1077
CfoI GCGC 1 cut(s) 766
Cfr13I GGNCC 4 cut(s) 35, 271, 846, 913
Csp6I GTAC 4 cut(s) 208, 482, 576, 794
CviAII CATG 6 cut(s) 442, 563, 651, 860, 1060, 1078
CviQI GTAC 4 cut(s) 208, 482, 576, 794
DdeI CTNAG 5 cut(s) 290, 590, 729, 979, 1130
DpnI GATC 3 cut(s) 383, 588, 672
DpnII GATC 3 cut(s) 381, 586, 670
DraIII CACNNNGTG 1 cut(s) 401
EaeI YGGCCR 1 cut(s) 196
Eam1104I CTCTTC 2 cut(s) 300, 1191
EarI CTCTTC 2 cut(s) 300, 1191
Eco130I CCWWGG 2 cut(s) 441, 769
Eco24I GRGCYC 1 cut(s) 1032
Eco31I GGTCTC 1 cut(s) 1133
Eco47I GGWCC 3 cut(s) 35, 846, 913
Eco57I CTGAAG 1 cut(s) 305
Eco81I CCTNAGG 1 cut(s) 290
EcoO109I RGGNCCY 3 cut(s) 35, 846, 913
EcoRII CCWGG 5 cut(s) 31, 238, 276, 818, 958
EcoT14I CCWWGG 2 cut(s) 441, 769
EcoT38I GRGCYC 1 cut(s) 1032
ErhI CCWWGG 2 cut(s) 441, 769
FaeI CATG 6 cut(s) 445, 566, 654, 863, 1063, 1081
FaqI GGGAC 1 cut(s) 899
FatI CATG 6 cut(s) 441, 562, 650, 859, 1059, 1077
FauI CCCGC 1 cut(s) 256
Fnu4HI GCNGC 3 cut(s) 558, 726, 747
FokI GGATG 1 cut(s) 840
FriOI GRGCYC 1 cut(s) 1032
Fsp4HI GCNGC 3 cut(s) 558, 726, 747
FspBI CTAG 2 cut(s) 12, 117
GlaI GCGC 1 cut(s) 765
GluI GCNGC 3 cut(s) 558, 726, 747
HaeII RGCGCY 1 cut(s) 767
HaeIII GGCC 3 cut(s) 5, 198, 273
HapII CCGG 1 cut(s) 39
HhaI GCGC 1 cut(s) 766
Hin1II CATG 6 cut(s) 445, 566, 654, 863, 1063, 1081
Hin6I GCGC 1 cut(s) 764
HinP1I GCGC 1 cut(s) 764
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HinfI GANTC 4 cut(s) 159, 254, 281, 446
HpaI GTTAAC 1 cut(s) 841
HpaII CCGG 1 cut(s) 39
HphI GGTGA 4 cut(s) 233, 815, 963, 1130
Hpy166II GTNNAC 3 cut(s) 423, 841, 865
Hpy188I TCNGA 4 cut(s) 141, 324, 412, 986
Hpy188III TCNNGA 5 cut(s) 302, 345, 921, 1060, 1078
Hpy8I GTNNAC 3 cut(s) 423, 841, 865
Hpy99I CGWCG 1 cut(s) 801
HpyAV CCTTC 6 cut(s) 329, 351, 395, 563, 817, 1109
HpyCH4III ACNGT 2 cut(s) 481, 602
HpyCH4IV ACGT 2 cut(s) 792, 796
HpyCH4V TGCA 8 cut(s) 69, 83, 404, 638, 650, 666, 746, 853
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 5 cut(s) 290, 590, 729, 979, 1130
HpySE526I ACGT 2 cut(s) 792, 796
Hsp92II CATG 6 cut(s) 445, 566, 654, 863, 1063, 1081
HspAI GCGC 1 cut(s) 764
KflI GGGWCCC 1 cut(s) 913
KspAI GTTAAC 1 cut(s) 841
Kzo9I GATC 3 cut(s) 381, 586, 670
LmnI GCTCC 3 cut(s) 554, 771, 1027
Lsp1109I GCAGC 3 cut(s) 544, 712, 758
LweI GCATC 2 cut(s) 772, 862
MaeI CTAG 2 cut(s) 12, 117
MaeII ACGT 2 cut(s) 792, 796
MaeIII GTNAC 2 cut(s) 221, 1118
MalI GATC 3 cut(s) 383, 588, 672
MboI GATC 3 cut(s) 381, 586, 670
MboII GAAGA 6 cut(s) 46, 317, 425, 884, 1165, 1208
MflI RGATCY 1 cut(s) 381
MhlI GDGCHC 2 cut(s) 301, 1032
MlsI TGGCCA 1 cut(s) 198
MluCI AATT 7 cut(s) 228, 405, 489, 499, 693, 810, 900
MluNI TGGCCA 1 cut(s) 198
MlyI GAGTC 4 cut(s) 153, 263, 290, 440
Mox20I TGGCCA 1 cut(s) 198
MscI TGGCCA 1 cut(s) 198
MseI TTAA 4 cut(s) 357, 759, 813, 840
MslI CAYNNNNRTG 1 cut(s) 858
Msp20I TGGCCA 1 cut(s) 198
MspA1I CMGCKG 1 cut(s) 749
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 6 cut(s) 33, 39, 240, 278, 820, 960
Mva1269I GAATGC 1 cut(s) 748
MvaI CCWGG 5 cut(s) 33, 240, 278, 820, 960
MwoI GCNNNNNNNGC 1 cut(s) 80
NciI CCSGG 1 cut(s) 39
NcoI CCATGG 1 cut(s) 441
NdeII GATC 3 cut(s) 381, 586, 670
NlaIII CATG 6 cut(s) 445, 566, 654, 863, 1063, 1081
NlaIV GGNNCC 6 cut(s) 37, 43, 848, 914, 915, 1029
NmuCI GTSAC 2 cut(s) 221, 1118
PagI TCATGA 2 cut(s) 1059, 1077
PcsI WCGNNNNNNNCGW 1 cut(s) 679
PctI GAATGC 1 cut(s) 748
Pfl23II CGTACG 1 cut(s) 793
PflMI CCANNNNNTGG 2 cut(s) 1024, 1167
PkrI GCNGC 3 cut(s) 559, 727, 748
PleI GAGTC 4 cut(s) 153, 262, 289, 440
PpsI GAGTC 4 cut(s) 153, 262, 289, 440
Ppu21I YACGTR 1 cut(s) 793
PpuMI RGGWCCY 3 cut(s) 35, 846, 913
PshAI GACNNNNGTC 1 cut(s) 1125
Psp5II RGGWCCY 3 cut(s) 35, 846, 913
Psp6I CCWGG 5 cut(s) 31, 238, 276, 818, 958
PspGI CCWGG 5 cut(s) 31, 238, 276, 818, 958
PspLI CGTACG 1 cut(s) 793
PspN4I GGNNCC 6 cut(s) 37, 43, 848, 914, 915, 1029
PspPI GGNCC 4 cut(s) 35, 271, 846, 913
PspPPI RGGWCCY 3 cut(s) 35, 846, 913
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 1 cut(s) 381
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 4 cut(s) 209, 483, 577, 795
RsaNI GTAC 4 cut(s) 208, 482, 576, 794
RseI CAYNNNNRTG 1 cut(s) 858
SaqAI TTAA 4 cut(s) 357, 759, 813, 840
SatI GCNGC 3 cut(s) 558, 726, 747
Sau3AI GATC 3 cut(s) 381, 586, 670
Sau96I GGNCC 4 cut(s) 35, 271, 846, 913
SchI GAGTC 4 cut(s) 153, 263, 290, 440
ScrFI CCNGG 6 cut(s) 33, 39, 240, 278, 820, 960
SduI GDGCHC 2 cut(s) 301, 1032
SfaNI GCATC 2 cut(s) 772, 862
SfcI CTRYAG 2 cut(s) 1012, 1183
SinI GGWCC 3 cut(s) 35, 846, 913
SmiMI CAYNNNNRTG 1 cut(s) 858
SpeI ACTAGT 1 cut(s) 116
Sse9I AATT 7 cut(s) 228, 405, 489, 499, 693, 810, 900
SsiI CCGC 1 cut(s) 263
SspMI CTAG 2 cut(s) 12, 117
StyD4I CCNGG 6 cut(s) 31, 37, 238, 276, 818, 958
StyI CCWWGG 2 cut(s) 441, 769
TaaI ACNGT 2 cut(s) 481, 602
TaiI ACGT 2 cut(s) 795, 799
TaqI TCGA 5 cut(s) 150, 517, 673, 719, 1191
TasI AATT 7 cut(s) 228, 405, 489, 499, 693, 810, 900
Tru1I TTAA 4 cut(s) 357, 759, 813, 840
Tru9I TTAA 4 cut(s) 357, 759, 813, 840
TscAI CASTG 2 cut(s) 254, 484
TseFI GTSAC 2 cut(s) 221, 1118
TseI GCWGC 3 cut(s) 557, 725, 746
Tsp45I GTSAC 2 cut(s) 221, 1118
TspDTI ATGAA 6 cut(s) 377, 551, 993, 1048, 1087, 1209
TspRI CASTG 2 cut(s) 254, 484
Van91I CCANNNNNTGG 2 cut(s) 1024, 1167
VpaK11BI GGWCC 3 cut(s) 35, 846, 913
XspI CTAG 2 cut(s) 12, 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.