Prupe.1G577500_v2.0.a1

At5g49945-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
47014161 .. 47018286
4126 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G577500.1

Sequence Viewer

Length: 1482 bp
ATGGCCTCACTCTCTCTCCTTCCTCTCCTCTCTCTCTTCCTCTCCCTCTTCCTCCTCTCCCATCTCTCCTTCTCTCCCACCGTCGTCGTCGCCGACTCCCACTTTGAAGGCTTCGAAGACGCCGACGGCATCGACGACGCCGACGACGAAGACTCCTCCCTCCCTCTCTCCACCCTCACCCGCCCTTCCCAAACACCCCTCACCACCACCCCCTCCCAGCCCGACTCACCTCCCTCCCCGGATCCCTCCCAACCGGACCCGGATCCCAACCCGACCCCCAATTTGGACCCTCCGCCCACCGATCTTCCCAAACCCTCCTCCACCAGCTTCGAGTATTGGGACGAGGACGAGTTCGAAGGCCTGCCCATCCAACCTGAGCAACCACTTCAACAACCGCCCCTCGACGACCAGAAAATTACCGAAAATGCCACTCCCTCCTCCGATTCCGATCCCAAACCCTCCGCCGACCCCAGACCCCCTGCCGCAACTAGATCGTTCGTTGTGGAGATTGCGTGCGGAGGGTTCCTCATCGTCTTCGCTATCAACTACTTCACCGGAAAGCGGGTGAACGAGAACATCGCCCTAGCTTGGGCTGCAAAATTCGCGACGAAAGACTCGATCTTCGAGAAGAACTTCAGCCTTTTGGGGGTCGGAGACGGCGACGACTCGCCGTTGCTGTTGAAGGAAGGGCAGAACGTATTCAAGTTCTACGCGAGTGGGCGGAGGTGCTGCCAGGGGCTTTTGGCGACGATGGAGCTCAAGAGCCGCCACGATTTGATCTCCTCCATTTTCAACTTGGTGGTGCCGAGTAGGGACGAGATCAATCTCGAGGTTTATATGAATGATGATGCGATGGACCACGTGGTTTTCGCCGTGGCGAGGAAGAAGGCGGCCAAAGCAATGCAGAAGGAGGTTCCCGACTTGCAGAAGTTTGCCGGGATCCTGTCGCCGCCCACTGGAAGGAAGTGGGTTGCTGAGGACTTGGCTGTTATCTCAGAGTCGAAGGAGGTAGCTGGGGATTTGATCACCGAGACTGTGCTTGATCAGGTTTTTGGTGAGAAAGCTTTTCAGAAATTTGGAAAGGGGTTCATCTACATGCATTTTTCAGATCAACATCCAGGGACACACAAGAAGATGCTTTTGTTCAAGTTTGCCCTACCAGATGCCAGTAACATGGCGGATATGACTCGTTTGGTGGCTCTGGTACCTTATTATATTGATTTGATTGGGCGCTACAAACTAAGTAGTCAGGCTCGATCAAAAACAGAAGCAATCAGATCAAAAGCTGCTCAAGAGGCTTACAAGGAACTCCAAAATGCTAGACAAGAGGCCTTGCAAAGAAAGAAGGCAGAGAGGAAAAAGATGATGGAGGAGGCCGAGGCTAAGCTCAGTGCAGAGAGTATTCGCAAGAAAGAAGCAAAAGAGCGTGCTCGTCAGATGAAGAAAGCAATGCCGAAAATAAAAATGACCCGTGCTAGCTGA
Functional Annotation

Protein Analysis

494

Amino Acids

54.66

Weight (kDa)

5.36

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1204
AccB1I GGYRCC 2 cut(s) 802, 1204
AccII CGCG 2 cut(s) 605, 713
AclWI GGATC 7 cut(s) 236, 249, 257, 270, 443, 934, 947
AcoI YGGCCR 1 cut(s) 891
AcsI RAATTY 2 cut(s) 599, 1073
AcuI CTGAAG 1 cut(s) 619
AcvI CACGTG 1 cut(s) 862
AcyI GRCGYC 2 cut(s) 120, 138
AfaI GTAC 1 cut(s) 1206
AfiI CCNNNNNNNGG 8 cut(s) 283, 561, 588, 589, 646, 879, 956, 960
AgsI TTSAA 6 cut(s) 107, 389, 682, 703, 793, 1147
AjnI CCWGG 2 cut(s) 732, 1117
AluBI AGCT 8 cut(s) 327, 587, 757, 1013, 1064, 1286, 1387, 1479
AluI AGCT 8 cut(s) 327, 587, 757, 1013, 1064, 1286, 1387, 1479
Alw21I GWGCWC 2 cut(s) 759, 1432
Alw26I GTCTC 2 cut(s) 648, 1025
AlwI GGATC 7 cut(s) 236, 249, 257, 270, 443, 934, 947
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 5 cut(s) 3, 358, 891, 1329, 1374
ApeKI GCWGC 3 cut(s) 593, 729, 1286
ApoI RAATTY 2 cut(s) 599, 1073
ArsI GACNNNNNNTTYG 6 cut(s) 86, 118, 265, 297, 605, 637
Asp700I GAANNNNTTC 2 cut(s) 632, 698
Asp718I GGTACC 1 cut(s) 1204
AspLEI GCGC 1 cut(s) 1233
AspS9I GGNCC 3 cut(s) 256, 286, 856
AsuC2I CCSGG 3 cut(s) 239, 260, 937
AsuHPI GGTGA 7 cut(s) 169, 193, 219, 544, 577, 1018, 1067
AsuII TTCGAA 2 cut(s) 114, 354
AsuNHI GCTAGC 1 cut(s) 1475
AvaI CYCGRG 1 cut(s) 827
AvaII GGWCC 3 cut(s) 256, 286, 856
BamHI GGATCC 3 cut(s) 241, 262, 939
BanI GGYRCC 2 cut(s) 802, 1204
BanII GRGCYC 1 cut(s) 759
BbrPI CACGTG 1 cut(s) 862
BbsI GAAGAC 3 cut(s) 123, 156, 526
Bbv12I GWGCWC 2 cut(s) 759, 1432
BbvCI CCTCAGC 1 cut(s) 975
BbvI GCAGC 3 cut(s) 580, 716, 1273
BccI CCATC 5 cut(s) 69, 374, 745, 847, 1360
BceAI ACGGC 4 cut(s) 142, 655, 673, 857
BcgI CGANNNNNNTGC 2 cut(s) 474, 508
BciT130I CCWGG 2 cut(s) 734, 1119
BclI TGATCA 2 cut(s) 1023, 1042
BcnI CCSGG 3 cut(s) 239, 260, 937
BcoDI GTCTC 2 cut(s) 648, 1025
BfaI CTAG 4 cut(s) 489, 584, 1320, 1476
BfoI RGCGCY 1 cut(s) 1234
BisI GCNGC 7 cut(s) 483, 594, 730, 766, 891, 950, 1287
BlpI GCTNAGC 1 cut(s) 1383
BlsI GCNGC 7 cut(s) 484, 595, 731, 767, 892, 951, 1288
Bme1390I CCNGG 5 cut(s) 239, 260, 734, 937, 1119
Bme18I GGWCC 3 cut(s) 256, 286, 856
BmeT110I CYCGRG 1 cut(s) 827
BmgT120I GGNCC 3 cut(s) 256, 286, 856
BmiI GGNNCC 9 cut(s) 243, 258, 264, 288, 524, 804, 915, 941, 1206
BmrFI CCNGG 5 cut(s) 239, 260, 734, 937, 1119
BmsI GCATC 4 cut(s) 138, 838, 1125, 1153
BmtI GCTAGC 1 cut(s) 1479
BpiI GAAGAC 3 cut(s) 123, 156, 526
BplI GAGNNNNNCTC 2 cut(s) 510, 542
Bpu10I CCTNAGC 2 cut(s) 375, 975
Bpu1102I GCTNAGC 1 cut(s) 1383
Bpu14I TTCGAA 2 cut(s) 114, 354
BpuEI CTTGAG 2 cut(s) 743, 1275
BpuMI CCSGG 3 cut(s) 239, 260, 937
BsaAI YACGTR 1 cut(s) 862
BsaBI GATNNNNATC 2 cut(s) 447, 1113
BsaHI GRCGYC 2 cut(s) 120, 138
BsaJI CCNNGG 5 cut(s) 237, 733, 873, 1118, 1377
BsaWI WCCGGW 2 cut(s) 253, 554
BsaXI ACNNNNNCTCC 5 cut(s) 30, 137, 167, 497, 527
Bsc4I CCNNNNNNNGG 8 cut(s) 283, 561, 588, 589, 646, 879, 956, 960
Bse1I ACTGG 2 cut(s) 961, 1167
Bse3DI GCAATG 2 cut(s) 906, 1455
Bse8I GATNNNNATC 2 cut(s) 447, 1113
BseBI CCWGG 2 cut(s) 734, 1119
BseDI CCNNGG 5 cut(s) 237, 733, 873, 1118, 1377
BseGI GGATG 2 cut(s) 366, 1114
BseJI GATNNNNATC 2 cut(s) 447, 1113
BseLI CCNNNNNNNGG 8 cut(s) 283, 561, 588, 589, 646, 879, 956, 960
BseMI GCAATG 2 cut(s) 906, 1455
BseMII CTCAG 4 cut(s) 366, 966, 1008, 1402
BseNI ACTGG 2 cut(s) 961, 1167
BseRI GAGGAG 7 cut(s) 17, 44, 145, 307, 427, 772, 1385
BseXI GCAGC 3 cut(s) 580, 716, 1273
BseYI CCCAGC 2 cut(s) 216, 1013
BsgI GTGCAG 1 cut(s) 1413
Bsh1236I CGCG 2 cut(s) 605, 713
BshFI GGCC 5 cut(s) 5, 360, 893, 1331, 1376
BshNI GGYRCC 2 cut(s) 802, 1204
BsiHKAI GWGCWC 2 cut(s) 759, 1432
BsiHKCI CYCGRG 1 cut(s) 827
BsiSI CCGG 5 cut(s) 239, 254, 260, 555, 936
BslFI GGGAC 3 cut(s) 353, 827, 1135
BslI CCNNNNNNNGG 8 cut(s) 283, 561, 588, 589, 646, 879, 956, 960
BsmAI GTCTC 2 cut(s) 648, 1025
BsmBI CGTCTC 1 cut(s) 648
BsmFI GGGAC 3 cut(s) 353, 827, 1135
BsnI GGCC 5 cut(s) 5, 360, 893, 1331, 1376
BsoBI CYCGRG 1 cut(s) 827
Bsp119I TTCGAA 2 cut(s) 114, 354
Bsp1286I GDGCHC 2 cut(s) 759, 1432
Bsp1720I GCTNAGC 1 cut(s) 1383
Bsp68I TCGCGA 1 cut(s) 605
BspANI GGCC 5 cut(s) 5, 360, 893, 1331, 1376
BspCNI CTCAG 4 cut(s) 367, 967, 1007, 1401
BspFNI CGCG 2 cut(s) 605, 713
BspLI GGNNCC 9 cut(s) 243, 258, 264, 288, 524, 804, 915, 941, 1206
BspOI GCTAGC 1 cut(s) 1479
BspPI GGATC 7 cut(s) 236, 249, 257, 270, 443, 934, 947
BspT104I TTCGAA 2 cut(s) 114, 354
BspT107I GGYRCC 2 cut(s) 802, 1204
BsrDI GCAATG 2 cut(s) 906, 1455
BsrI ACTGG 2 cut(s) 961, 1167
BssECI CCNNGG 5 cut(s) 237, 733, 873, 1118, 1377
BssNI GRCGYC 2 cut(s) 120, 138
Bst2UI CCWGG 2 cut(s) 734, 1119
Bst4CI ACNGT 2 cut(s) 82, 1036
Bst6I CTCTTC 2 cut(s) 41, 53
BstACI GRCGYC 2 cut(s) 120, 138
BstBAI YACGTR 1 cut(s) 862
BstBI TTCGAA 2 cut(s) 114, 354
BstC8I GCNNGC 4 cut(s) 362, 514, 1428, 1477
BstDEI CTNAG 6 cut(s) 375, 975, 994, 1241, 1383, 1388
BstDSI CCRYGG 1 cut(s) 873
BstF5I GGATG 2 cut(s) 366, 1114
BstFNI CGCG 2 cut(s) 605, 713
BstH2I RGCGCY 1 cut(s) 1234
BstHHI GCGC 1 cut(s) 1233
BstMAI GTCTC 2 cut(s) 648, 1025
BstMWI GCNNNNNNNGC 4 cut(s) 593, 602, 896, 1295
BstNI CCWGG 2 cut(s) 734, 1119
BstNSI RCATGY 1 cut(s) 1099
BstSCI CCNGG 5 cut(s) 237, 258, 732, 935, 1117
BstUI CGCG 2 cut(s) 605, 713
BstV1I GCAGC 3 cut(s) 580, 716, 1273
BstV2I GAAGAC 3 cut(s) 123, 156, 526
BstX2I RGATCY 3 cut(s) 241, 262, 939
BstXI CCANNNNNNTGG 1 cut(s) 1174
BstYI RGATCY 3 cut(s) 241, 262, 939
BsuRI GGCC 5 cut(s) 5, 360, 893, 1331, 1376
BtgI CCRYGG 1 cut(s) 873
BtgZI GCGATG 2 cut(s) 562, 866
BtsCI GGATG 2 cut(s) 366, 1114
BtsIMutI CAGTG 2 cut(s) 954, 1396
BtuMI TCGCGA 1 cut(s) 605
Cac8I GCNNGC 4 cut(s) 362, 514, 1428, 1477
CfoI GCGC 1 cut(s) 1233
Cfr13I GGNCC 3 cut(s) 256, 286, 856
CseI GACGC 2 cut(s) 128, 146
Csp6I GTAC 1 cut(s) 1205
CviAII CATG 2 cut(s) 1096, 1174
CviQI GTAC 1 cut(s) 1205
DdeI CTNAG 6 cut(s) 375, 975, 994, 1241, 1383, 1388
EaeI YGGCCR 1 cut(s) 891
Eam1104I CTCTTC 2 cut(s) 41, 53
EarI CTCTTC 2 cut(s) 41, 53
EciI GGCGGA 4 cut(s) 282, 451, 736, 1193
Ecl136II GAGCTC 1 cut(s) 757
Eco147I AGGCCT 2 cut(s) 360, 1331
Eco24I GRGCYC 1 cut(s) 759
Eco47I GGWCC 3 cut(s) 256, 286, 856
Eco53kI GAGCTC 1 cut(s) 757
Eco57I CTGAAG 1 cut(s) 619
Eco72I CACGTG 1 cut(s) 862
Eco88I CYCGRG 1 cut(s) 827
EcoICRI GAGCTC 1 cut(s) 757
EcoRII CCWGG 2 cut(s) 732, 1117
EcoT22I ATGCAT 1 cut(s) 1101
EcoT38I GRGCYC 1 cut(s) 759
Esp3I CGTCTC 1 cut(s) 648
FaeI CATG 2 cut(s) 1099, 1177
FaiI YATR 6 cut(s) 837, 839, 1097, 1175, 1184, 1215
FaqI GGGAC 3 cut(s) 353, 827, 1135
FatI CATG 2 cut(s) 1095, 1173
FauI CCCGC 2 cut(s) 188, 555
FbaI TGATCA 2 cut(s) 1023, 1042
Fnu4HI GCNGC 7 cut(s) 483, 594, 730, 766, 891, 950, 1287
FokI GGATG 2 cut(s) 353, 1101
FriOI GRGCYC 1 cut(s) 759
Fsp4HI GCNGC 7 cut(s) 483, 594, 730, 766, 891, 950, 1287
FspBI CTAG 4 cut(s) 489, 584, 1320, 1476
GlaI GCGC 1 cut(s) 1232
GluI GCNGC 7 cut(s) 483, 594, 730, 766, 891, 950, 1287
GsaI CCCAGC 2 cut(s) 220, 1017
HaeII RGCGCY 1 cut(s) 1234
HaeIII GGCC 5 cut(s) 5, 360, 893, 1331, 1376
HapII CCGG 5 cut(s) 239, 254, 260, 555, 936
HgaI GACGC 2 cut(s) 128, 146
HhaI GCGC 1 cut(s) 1233
Hin1I GRCGYC 2 cut(s) 120, 138
Hin1II CATG 2 cut(s) 1099, 1177
Hin6I GCGC 1 cut(s) 1231
HinP1I GCGC 1 cut(s) 1231
HindIII AAGCTT 1 cut(s) 1062
HinfI GANTC 8 cut(s) 95, 152, 224, 443, 614, 665, 998, 1186
HpaII CCGG 5 cut(s) 239, 254, 260, 555, 936
HphI GGTGA 7 cut(s) 169, 193, 219, 544, 577, 1018, 1067
Hpy166II GTNNAC 1 cut(s) 568
Hpy188I TCNGA 8 cut(s) 442, 448, 653, 997, 1071, 1108, 1277, 1437
Hpy188III TCNNGA 6 cut(s) 604, 625, 760, 827, 917, 1292
Hpy8I GTNNAC 1 cut(s) 568
HpyCH4III ACNGT 2 cut(s) 82, 1036
HpyCH4IV ACGT 2 cut(s) 696, 861
HpyCH4V TGCA 6 cut(s) 596, 904, 925, 1099, 1336, 1394
HpyF10VI GCNNNNNNNGC 4 cut(s) 593, 602, 896, 1295
HpyF3I CTNAG 6 cut(s) 375, 975, 994, 1241, 1383, 1388
HpySE526I ACGT 2 cut(s) 696, 861
Hsp92I GRCGYC 2 cut(s) 120, 138
Hsp92II CATG 2 cut(s) 1099, 1177
HspAI GCGC 1 cut(s) 1231
KpnI GGTACC 1 cut(s) 1208
Ksp22I TGATCA 2 cut(s) 1023, 1042
LmnI GCTCC 1 cut(s) 754
Lsp1109I GCAGC 3 cut(s) 580, 716, 1273
LweI GCATC 4 cut(s) 138, 838, 1125, 1153
MaeI CTAG 4 cut(s) 489, 584, 1320, 1476
MaeII ACGT 2 cut(s) 696, 861
MaeIII GTNAC 1 cut(s) 1169
MflI RGATCY 3 cut(s) 241, 262, 939
MhlI GDGCHC 2 cut(s) 759, 1432
MluCI AATT 4 cut(s) 280, 414, 599, 1073
MlyI GAGTC 7 cut(s) 89, 146, 218, 608, 659, 1007, 1180
MmeI TCCRAC 2 cut(s) 394, 631
Mph1103I ATGCAT 1 cut(s) 1101
MroXI GAANNNNTTC 2 cut(s) 632, 698
MslI CAYNNNNRTG 1 cut(s) 1094
MspI CCGG 5 cut(s) 239, 254, 260, 555, 936
MspR9I CCNGG 5 cut(s) 239, 260, 734, 937, 1119
MvaI CCWGG 2 cut(s) 734, 1119
MvnI CGCG 2 cut(s) 605, 713
MwoI GCNNNNNNNGC 4 cut(s) 593, 602, 896, 1295
NciI CCSGG 3 cut(s) 239, 260, 937
NheI GCTAGC 1 cut(s) 1475
NlaIII CATG 2 cut(s) 1099, 1177
NlaIV GGNNCC 9 cut(s) 243, 258, 264, 288, 524, 804, 915, 941, 1206
NmeAIII GCCGAG 2 cut(s) 831, 1402
NruI TCGCGA 1 cut(s) 605
NsiI ATGCAT 1 cut(s) 1101
NspI RCATGY 1 cut(s) 1099
NspV TTCGAA 2 cut(s) 114, 354
PaeR7I CTCGAG 1 cut(s) 827
PceI AGGCCT 2 cut(s) 360, 1331
PcsI WCGNNNNNNNCGW 8 cut(s) 90, 120, 132, 138, 141, 144, 614, 657
PdmI GAANNNNTTC 2 cut(s) 632, 698
PfeI GAWTC 1 cut(s) 443
PkrI GCNGC 7 cut(s) 484, 595, 731, 767, 892, 951, 1288
PleI GAGTC 7 cut(s) 89, 146, 218, 608, 659, 1006, 1180
PmaCI CACGTG 1 cut(s) 862
PmlI CACGTG 1 cut(s) 862
PpsI GAGTC 7 cut(s) 89, 146, 218, 608, 659, 1006, 1180
Ppu21I YACGTR 1 cut(s) 862
Psp124BI GAGCTC 1 cut(s) 759
Psp6I CCWGG 2 cut(s) 732, 1117
PspCI CACGTG 1 cut(s) 862
PspFI CCCAGC 2 cut(s) 216, 1013
PspGI CCWGG 2 cut(s) 732, 1117
PspN4I GGNNCC 9 cut(s) 243, 258, 264, 288, 524, 804, 915, 941, 1206
PspPI GGNCC 3 cut(s) 256, 286, 856
PsuI RGATCY 3 cut(s) 241, 262, 939
RruI TCGCGA 1 cut(s) 605
RsaI GTAC 1 cut(s) 1206
RsaNI GTAC 1 cut(s) 1205
RseI CAYNNNNRTG 1 cut(s) 1094
SacI GAGCTC 1 cut(s) 759
SatI GCNGC 7 cut(s) 483, 594, 730, 766, 891, 950, 1287
Sau96I GGNCC 3 cut(s) 256, 286, 856
SchI GAGTC 7 cut(s) 89, 146, 218, 608, 659, 1007, 1180
ScrFI CCNGG 5 cut(s) 239, 260, 734, 937, 1119
SduI GDGCHC 2 cut(s) 759, 1432
SfaNI GCATC 4 cut(s) 138, 838, 1125, 1153
Sfr274I CTCGAG 1 cut(s) 827
SfuI TTCGAA 2 cut(s) 114, 354
SinI GGWCC 3 cut(s) 256, 286, 856
SlaI CTCGAG 1 cut(s) 827
SmiMI CAYNNNNRTG 1 cut(s) 1094
SmlI CTYRAG 3 cut(s) 758, 827, 1290
SmoI CTYRAG 3 cut(s) 758, 827, 1290
Sse9I AATT 4 cut(s) 280, 414, 599, 1073
SseBI AGGCCT 2 cut(s) 360, 1331
SspMI CTAG 4 cut(s) 489, 584, 1320, 1476
SstI GAGCTC 1 cut(s) 759
StuI AGGCCT 2 cut(s) 360, 1331
StyD4I CCNGG 5 cut(s) 237, 258, 732, 935, 1117
TaaI ACNGT 2 cut(s) 82, 1036
TaiI ACGT 2 cut(s) 699, 864
TasI AATT 4 cut(s) 280, 414, 599, 1073
TauI GCSGC 4 cut(s) 485, 768, 893, 952
TfiI GAWTC 1 cut(s) 443
TscAI CASTG 2 cut(s) 961, 1396
TseI GCWGC 3 cut(s) 593, 729, 1286
TspDTI ATGAA 3 cut(s) 854, 1078, 1454
TspRI CASTG 2 cut(s) 961, 1396
VpaK11BI GGWCC 3 cut(s) 256, 286, 856
XapI RAATTY 2 cut(s) 599, 1073
XceI RCATGY 1 cut(s) 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 793
XhoI CTCGAG 1 cut(s) 827
XmnI GAANNNNTTC 2 cut(s) 632, 698
XspI CTAG 4 cut(s) 489, 584, 1320, 1476
Zsp2I ATGCAT 1 cut(s) 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.