Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008425

Physical Location & Seq

Genomic Coordinates Reverse (-)

1350483 .. 1357595

Gene Structure 7113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G015300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGAAGTTAGCAACGTCATCATATTCATATTCCTCAGTTACTCCTATTCATTCTGTTTTTCTTCACAAAAACCGTCGCAAATTGTCATTTAATATATTTCAGGGTACTTCTTCTTCAACAACCGCATCCAATTCCACATCCACTTCTTCTTCCACTCAAACCCATCAACTACTAAGCACACCCGCCGCAATGGTTTCTTCCCTCCGGACCCACCGCCATGCCCACTATCCTCCTCCGTGGTTTAGTGTTGCTCCTATGATGGAATGGACTGATAATCACTACAGGACTCTGGCCAGGCTCATTTCAAAGAACGCATGGCTCTACACTGAGATGCTTGCTGCTGAAACAATTGTCTATCAAAAGGACAATCTGGACAGATTCTTGGAATATTCTCCAGAACAACATCCTATTGTTCTTCAAATTGGCGGGAATAATTTGGAAAACCTGGCCAAAGCGACTGAGCTTGCTGAACCTTACAAATACGATGAGATCAATTTTAATTGTGGATGTCCAAGTCCAAGAGTAGCTGGACATGGGTGCTTTGGTGCTCGCCTTATGCTTGATCCAAAGTTTGTTGCTGAGGCTATGTCAGTGATTGCTGCGCACACAGATGCCCCTGTCAGTGTTAAGTGTCGAATTGGTGTTGATGATCATGATTCATATAATGAGCTCTGTGACTTTATTTACAAGGTTTCTTCTCAATCACCAACTAGGCATTTCATAATACATTCACGGAAGGCACTACTCAATGGAATTAGCCCAGCTGAAAATCGAAGTATTCCACCTCTTAAATACGAGTACTTTTATGGCCTTTTGCGTGACTTTCCAGACTTAAGATTTACGATAAATGGGGGCATAAACACTGTTGATGAGGTCAATGCAGCTAGAAGGGCAGGAGCTCATGGTGTAATGGTTGGACGTGCTGCATTTCAAAAGCCCTGGCATACTTTGGGACATGTTGATACTGCCATTTACGGTGCACCAAGCAGTGGTGTAACACGGCGTCAGATACTTGAGAAGTTTCAAGTGTATGGTGATTCTGCTGTGGGAAAATATGGACGCAAACCAACAGTGCGAGATGTGGCAAGGCCTTTGCTTGGTCTCTTCCATTCAGAACCTGGGAATGGTGTGTGGAAGCGAAAAGCTGATGCTGCTTTCCTGCATTGCACGACTATGAAATCATTTTTTGAGGAAACGCTTGTGGCAATTCCTGACCATGTACTAGATTCACCTATTGGAGAGCCATCATCAGGAGGTGAAGATCCTTTTGCCAATATTCATACTTTGCTGCCTCCAGCGTACGAATCAAGGGAGCAAGAACTACTATATGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dus

Protein Analysis

445

Amino Acids

49.39

Weight (kDa)

7.74

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47970 AT5G47970 AT5G47970
fragaria_vesca	FvH4_7g01180 FvH4_7g01180 FvH4_7g01180 FvH4_7g01180
malus_domestica	MD02G1308500.v1.1 MD07G1012900.v1.1
prunus_persica	Prupe.2G015300_v2.0.a1 Prupe.2G015300_v2.0.a1
pyrus_communis	pycom02g25980 pycom07g01050
rosa_chinensis	RchiOBHm_Chr1g0316511
rosa_laevigata	RLG00000030665
rosa_multiflora	Rmu_sc0006790.1_g000012
rosa_roxburghii	Rroxscaffold_4G00330940
rosa_rugosa	Rorug01G0011800
rosa_samantha	Rh1AG021300 Rh1BG016700 Rh1CG019300 Rh1DG016600
rosa_wichuraiana	Rw1G001390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	603
AccB7I	CCANNNNNTGG	1 cut(s)	989
AccIII	TCCGGA	1 cut(s)	204
AciI	CCGC	5 cut(s)	123, 183, 186, 214, 426
AclWI	GGATC	2 cut(s)	557, 1256
AcoI	YGGCCR	2 cut(s)	291, 447
AcyI	GRCGYC	1 cut(s)	1003
AfaI	GTAC	4 cut(s)	106, 800, 1221, 1301
AfiI	CCNNNNNNNGG	4 cut(s)	989, 1097, 1124, 1250
AflII	CTTAAG	1 cut(s)	832
AflIII	ACRYGT	1 cut(s)	955
AgsI	TTSAA	5 cut(s)	117, 306, 419, 932, 1025
AjiI	CACGTC	1 cut(s)	920
AjnI	CCWGG	4 cut(s)	293, 444, 938, 1117
AluBI	AGCT	7 cut(s)	463, 527, 670, 764, 884, 899, 1145
AluI	AGCT	7 cut(s)	463, 527, 670, 764, 884, 899, 1145
Alw21I	GWGCWC	4 cut(s)	550, 672, 901, 982
Alw26I	GTCTC	1 cut(s)	1106
Alw44I	GTGCAC	1 cut(s)	978
AlwI	GGATC	2 cut(s)	557, 1256
AlwNI	CAGNNNCTG	1 cut(s)	1118
Aor13HI	TCCGGA	1 cut(s)	204
AoxI	GGCC	4 cut(s)	291, 447, 808, 1088
ApaLI	GTGCAC	1 cut(s)	978
ApeKI	GCWGC	6 cut(s)	338, 599, 881, 923, 1151, 1288
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	1 cut(s)	207
AsuHPI	GGTGA	4 cut(s)	696, 1046, 1221, 1268
AvaII	GGWCC	1 cut(s)	207
BaeGI	GKGCMC	1 cut(s)	982
BalI	TGGCCA	2 cut(s)	293, 449
BanII	GRGCYC	2 cut(s)	672, 901
BarI	GAAGNNNNNNTAC	2 cut(s)	97, 129
Bbv12I	GWGCWC	4 cut(s)	550, 672, 901, 982
BbvCI	CCTCAGC	1 cut(s)	579
BbvI	GCAGC	6 cut(s)	325, 586, 893, 910, 1138, 1275
BccI	CCATC	3 cut(s)	171, 253, 1252
BceAI	ACGGC	1 cut(s)	1016
BciT130I	CCWGG	4 cut(s)	295, 446, 940, 1119
BclI	TGATCA	1 cut(s)	649
BcoDI	GTCTC	1 cut(s)	1106
BfaI	CTAG	4 cut(s)	711, 885, 1223, 1333
BfmI	CTRYAG	1 cut(s)	280
BfrI	CTTAAG	1 cut(s)	832
BisI	GCNGC	7 cut(s)	186, 339, 600, 882, 924, 1152, 1289
BlsI	GCNGC	7 cut(s)	187, 340, 601, 883, 925, 1153, 1290
BmcAI	AGTACT	1 cut(s)	800
Bme1390I	CCNGG	4 cut(s)	295, 446, 940, 1119
Bme18I	GGWCC	1 cut(s)	207
BmgBI	CACGTC	1 cut(s)	920
BmgT120I	GGNCC	1 cut(s)	207
BmiI	GGNNCC	1 cut(s)	209
BmrFI	CCNGG	4 cut(s)	295, 446, 940, 1119
BmsI	GCATC	4 cut(s)	134, 321, 601, 1138
BpmI	CTGGAG	2 cut(s)	378, 1278
Bpu10I	CCTNAGC	1 cut(s)	579
BpuEI	CTTGAG	1 cut(s)	1034
BsaHI	GRCGYC	1 cut(s)	1003
BsaI	GGTCTC	1 cut(s)	1106
BsaJI	CCNNGG	3 cut(s)	236, 938, 1118
BsaWI	WCCGGW	1 cut(s)	204
Bsc4I	CCNNNNNNNGG	4 cut(s)	989, 1097, 1124, 1250
Bse3DI	GCAATG	2 cut(s)	195, 1162
BseAI	TCCGGA	1 cut(s)	204
BseBI	CCWGG	4 cut(s)	295, 446, 940, 1119
BseDI	CCNNGG	3 cut(s)	236, 938, 1118
BseGI	GGATG	4 cut(s)	125, 137, 403, 512
BseLI	CCNNNNNNNGG	4 cut(s)	989, 1097, 1124, 1250
BseMI	GCAATG	2 cut(s)	195, 1162
BseMII	CTCAG	4 cut(s)	48, 318, 450, 570
BseRI	GAGGAG	1 cut(s)	222
BseSI	GKGCMC	1 cut(s)	982
BseXI	GCAGC	6 cut(s)	325, 586, 893, 910, 1138, 1275
BseYI	CCCAGC	1 cut(s)	760
BshFI	GGCC	4 cut(s)	293, 449, 810, 1090
BsiHKAI	GWGCWC	4 cut(s)	550, 672, 901, 982
BsiSI	CCGG	1 cut(s)	205
BsiWI	CGTACG	1 cut(s)	1299
BslFI	GGGAC	1 cut(s)	966
BslI	CCNNNNNNNGG	4 cut(s)	989, 1097, 1124, 1250
BsmAI	GTCTC	1 cut(s)	1106
BsmFI	GGGAC	1 cut(s)	966
BsnI	GGCC	4 cut(s)	293, 449, 810, 1090
Bso31I	GGTCTC	1 cut(s)	1106
Bsp1286I	GDGCHC	4 cut(s)	550, 672, 901, 982
Bsp13I	TCCGGA	1 cut(s)	204
Bsp143I	GATC	4 cut(s)	489, 562, 649, 1261
BspACI	CCGC	5 cut(s)	123, 183, 186, 214, 426
BspANI	GGCC	4 cut(s)	293, 449, 810, 1090
BspCNI	CTCAG	4 cut(s)	47, 319, 451, 571
BspEI	TCCGGA	1 cut(s)	204
BspHI	TCATGA	1 cut(s)	652
BspLI	GGNNCC	1 cut(s)	209
BspPI	GGATC	2 cut(s)	557, 1256
BspTI	CTTAAG	1 cut(s)	832
BspTNI	GGTCTC	1 cut(s)	1106
BsrDI	GCAATG	2 cut(s)	195, 1162
BssECI	CCNNGG	3 cut(s)	236, 938, 1118
BssMI	GATC	4 cut(s)	489, 562, 649, 1261
BssNI	GRCGYC	1 cut(s)	1003
Bst2UI	CCWGG	4 cut(s)	295, 446, 940, 1119
Bst4CI	ACNGT	4 cut(s)	74, 865, 977, 1072
Bst6I	CTCTTC	1 cut(s)	1109
BstACI	GRCGYC	1 cut(s)	1003
BstAFI	CTTAAG	1 cut(s)	832
BstC8I	GCNNGC	3 cut(s)	336, 465, 550
BstDEI	CTNAG	5 cut(s)	34, 173, 327, 459, 579
BstDSI	CCRYGG	1 cut(s)	236
BstF5I	GGATG	4 cut(s)	125, 137, 403, 512
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	4 cut(s)	492, 565, 652, 1264
BstMAI	GTCTC	1 cut(s)	1106
BstMBI	GATC	4 cut(s)	489, 562, 649, 1261
BstMWI	GCNNNNNNNGC	2 cut(s)	890, 1151
BstNI	CCWGG	4 cut(s)	295, 446, 940, 1119
BstNSI	RCATGY	1 cut(s)	959
BstSCI	CCNGG	4 cut(s)	293, 444, 938, 1117
BstSFI	CTRYAG	1 cut(s)	280
BstSLI	GKGCMC	1 cut(s)	982
BstV1I	GCAGC	6 cut(s)	325, 586, 893, 910, 1138, 1275
BstX2I	RGATCY	1 cut(s)	1261
BstYI	RGATCY	1 cut(s)	1261
BsuRI	GGCC	4 cut(s)	293, 449, 810, 1090
BtgI	CCRYGG	1 cut(s)	236
BtrI	CACGTC	1 cut(s)	920
BtsCI	GGATG	4 cut(s)	125, 137, 403, 512
BtsI	GCAGTG	1 cut(s)	994
BtsIMutI	CAGTG	6 cut(s)	324, 597, 628, 861, 994, 1077
Cac8I	GCNNGC	3 cut(s)	336, 465, 550
CaiI	CAGNNNCTG	1 cut(s)	1118
CciI	TCATGA	1 cut(s)	652
CfoI	GCGC	1 cut(s)	604
Cfr13I	GGNCC	1 cut(s)	207
CseI	GACGC	2 cut(s)	992, 1068
Csp6I	GTAC	4 cut(s)	105, 799, 1220, 1300
CviAII	CATG	7 cut(s)	218, 315, 533, 653, 902, 956, 1217
CviQI	GTAC	4 cut(s)	105, 799, 1220, 1300
DdeI	CTNAG	5 cut(s)	34, 173, 327, 459, 579
DpnI	GATC	4 cut(s)	491, 564, 651, 1263
DpnII	GATC	4 cut(s)	489, 562, 649, 1261
EaeI	YGGCCR	2 cut(s)	291, 447
Eam1104I	CTCTTC	1 cut(s)	1109
EarI	CTCTTC	1 cut(s)	1109
Ecl136II	GAGCTC	2 cut(s)	670, 899
Eco147I	AGGCCT	1 cut(s)	1090
Eco24I	GRGCYC	2 cut(s)	672, 901
Eco31I	GGTCTC	1 cut(s)	1106
Eco47I	GGWCC	1 cut(s)	207
Eco53kI	GAGCTC	2 cut(s)	670, 899
EcoICRI	GAGCTC	2 cut(s)	670, 899
EcoRII	CCWGG	4 cut(s)	293, 444, 938, 1117
EcoT38I	GRGCYC	2 cut(s)	672, 901
FaeI	CATG	7 cut(s)	221, 318, 536, 656, 905, 959, 1220
FaqI	GGGAC	1 cut(s)	966
FatI	CATG	7 cut(s)	217, 314, 532, 652, 901, 955, 1216
FauI	CCCGC	2 cut(s)	190, 419
FbaI	TGATCA	1 cut(s)	649
Fnu4HI	GCNGC	7 cut(s)	186, 339, 600, 882, 924, 1152, 1289
FokI	GGATG	4 cut(s)	112, 124, 390, 519
FriOI	GRGCYC	2 cut(s)	672, 901
Fsp4HI	GCNGC	7 cut(s)	186, 339, 600, 882, 924, 1152, 1289
FspBI	CTAG	4 cut(s)	711, 885, 1223, 1333
FspI	TGCGCA	1 cut(s)	603
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	7 cut(s)	186, 339, 600, 882, 924, 1152, 1289
GsaI	CCCAGC	1 cut(s)	764
GsuI	CTGGAG	2 cut(s)	378, 1278
HaeIII	GGCC	4 cut(s)	293, 449, 810, 1090
HapII	CCGG	1 cut(s)	205
HgaI	GACGC	2 cut(s)	992, 1068
HhaI	GCGC	1 cut(s)	604
Hin1I	GRCGYC	1 cut(s)	1003
Hin1II	CATG	7 cut(s)	221, 318, 536, 656, 905, 959, 1220
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HinfI	GANTC	6 cut(s)	286, 378, 656, 1037, 1226, 1304
HpaII	CCGG	1 cut(s)	205
HphI	GGTGA	4 cut(s)	696, 1046, 1221, 1268
Hpy166II	GTNNAC	1 cut(s)	980
Hpy188I	TCNGA	2 cut(s)	1008, 1114
Hpy188III	TCNNGA	7 cut(s)	205, 371, 395, 653, 827, 1211, 1251
Hpy8I	GTNNAC	1 cut(s)	980
Hpy99I	CGWCG	1 cut(s)	78
HpyAV	CCTTC	2 cut(s)	730, 882
HpyCH4III	ACNGT	4 cut(s)	74, 865, 977, 1072
HpyCH4IV	ACGT	2 cut(s)	14, 919
HpyCH4V	TGCA	5 cut(s)	881, 926, 980, 1162, 1167
HpyF10VI	GCNNNNNNNGC	2 cut(s)	890, 1151
HpyF3I	CTNAG	5 cut(s)	34, 173, 327, 459, 579
HpySE526I	ACGT	2 cut(s)	14, 919
Hsp92I	GRCGYC	1 cut(s)	1003
Hsp92II	CATG	7 cut(s)	221, 318, 536, 656, 905, 959, 1220
HspAI	GCGC	1 cut(s)	602
Kpn2I	TCCGGA	1 cut(s)	204
Ksp22I	TGATCA	1 cut(s)	649
Kzo9I	GATC	4 cut(s)	489, 562, 649, 1261
LmnI	GCTCC	3 cut(s)	256, 896, 1312
Lsp1109I	GCAGC	6 cut(s)	325, 586, 893, 910, 1138, 1275
LweI	GCATC	4 cut(s)	134, 321, 601, 1138
MaeI	CTAG	4 cut(s)	711, 885, 1223, 1333
MaeII	ACGT	2 cut(s)	14, 919
MaeIII	GTNAC	4 cut(s)	37, 674, 818, 994
MalI	GATC	4 cut(s)	491, 564, 651, 1263
MboI	GATC	4 cut(s)	489, 562, 649, 1261
MfeI	CAATTG	1 cut(s)	348
MflI	RGATCY	1 cut(s)	1261
MhlI	GDGCHC	4 cut(s)	550, 672, 901, 982
MlsI	TGGCCA	2 cut(s)	293, 449
MluNI	TGGCCA	2 cut(s)	293, 449
MlyI	GAGTC	1 cut(s)	280
MmeI	TCCRAC	1 cut(s)	895
Mox20I	TGGCCA	2 cut(s)	293, 449
MroI	TCCGGA	1 cut(s)	204
MscI	TGGCCA	2 cut(s)	293, 449
MseI	TTAA	5 cut(s)	90, 498, 627, 789, 833
MslI	CAYNNNNRTG	4 cut(s)	216, 329, 609, 1172
Msp20I	TGGCCA	2 cut(s)	293, 449
MspA1I	CMGCKG	1 cut(s)	764
MspCI	CTTAAG	1 cut(s)	832
MspI	CCGG	1 cut(s)	205
MspR9I	CCNGG	4 cut(s)	295, 446, 940, 1119
MunI	CAATTG	1 cut(s)	348
MvaI	CCWGG	4 cut(s)	295, 446, 940, 1119
MwoI	GCNNNNNNNGC	2 cut(s)	890, 1151
NdeII	GATC	4 cut(s)	489, 562, 649, 1261
NlaIII	CATG	7 cut(s)	221, 318, 536, 656, 905, 959, 1220
NlaIV	GGNNCC	1 cut(s)	209
NmuCI	GTSAC	2 cut(s)	674, 818
NsbI	TGCGCA	1 cut(s)	603
NspI	RCATGY	1 cut(s)	959
PagI	TCATGA	1 cut(s)	652
PceI	AGGCCT	1 cut(s)	1090
PciI	ACATGT	1 cut(s)	955
PfeI	GAWTC	5 cut(s)	378, 656, 1037, 1226, 1304
Pfl23II	CGTACG	1 cut(s)	1299
PflMI	CCANNNNNTGG	1 cut(s)	989
PkrI	GCNGC	7 cut(s)	187, 340, 601, 883, 925, 1153, 1290
PleI	GAGTC	1 cut(s)	280
PpsI	GAGTC	1 cut(s)	280
PscI	ACATGT	1 cut(s)	955
Psp124BI	GAGCTC	2 cut(s)	672, 901
Psp6I	CCWGG	4 cut(s)	293, 444, 938, 1117
PspFI	CCCAGC	1 cut(s)	760
PspGI	CCWGG	4 cut(s)	293, 444, 938, 1117
PspLI	CGTACG	1 cut(s)	1299
PspN4I	GGNNCC	1 cut(s)	209
PspPI	GGNCC	1 cut(s)	207
PstNI	CAGNNNCTG	1 cut(s)	1118
PsuI	RGATCY	1 cut(s)	1261
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	4 cut(s)	106, 800, 1221, 1301
RsaNI	GTAC	4 cut(s)	105, 799, 1220, 1300
RseI	CAYNNNNRTG	4 cut(s)	216, 329, 609, 1172
SacI	GAGCTC	2 cut(s)	672, 901
SaqAI	TTAA	5 cut(s)	90, 498, 627, 789, 833
SatI	GCNGC	7 cut(s)	186, 339, 600, 882, 924, 1152, 1289
Sau3AI	GATC	4 cut(s)	489, 562, 649, 1261
Sau96I	GGNCC	1 cut(s)	207
ScaI	AGTACT	1 cut(s)	800
SchI	GAGTC	1 cut(s)	280
ScrFI	CCNGG	4 cut(s)	295, 446, 940, 1119
SduI	GDGCHC	4 cut(s)	550, 672, 901, 982
SfaNI	GCATC	4 cut(s)	134, 321, 601, 1138
SfcI	CTRYAG	1 cut(s)	280
SinI	GGWCC	1 cut(s)	207
SmiMI	CAYNNNNRTG	4 cut(s)	216, 329, 609, 1172
SmlI	CTYRAG	2 cut(s)	832, 1013
SmoI	CTYRAG	2 cut(s)	832, 1013
SseBI	AGGCCT	1 cut(s)	1090
SsiI	CCGC	5 cut(s)	123, 183, 186, 214, 426
SspI	AATATT	2 cut(s)	389, 1276
SspMI	CTAG	4 cut(s)	711, 885, 1223, 1333
SstI	GAGCTC	2 cut(s)	672, 901
StuI	AGGCCT	1 cut(s)	1090
StyD4I	CCNGG	4 cut(s)	293, 444, 938, 1117
TaaI	ACNGT	4 cut(s)	74, 865, 977, 1072
TaiI	ACGT	2 cut(s)	17, 922
TaqI	TCGA	2 cut(s)	634, 772
TatI	WGTACW	2 cut(s)	798, 1219
TauI	GCSGC	1 cut(s)	188
TfiI	GAWTC	5 cut(s)	378, 656, 1037, 1226, 1304
Tru1I	TTAA	5 cut(s)	90, 498, 627, 789, 833
Tru9I	TTAA	5 cut(s)	90, 498, 627, 789, 833
TscAI	CASTG	6 cut(s)	331, 597, 628, 868, 994, 1077
TseFI	GTSAC	2 cut(s)	674, 818
TseI	GCWGC	6 cut(s)	338, 599, 881, 923, 1151, 1288
Tsp45I	GTSAC	2 cut(s)	674, 818
TspDTI	ATGAA	7 cut(s)	15, 17, 38, 648, 709, 1190, 1268
TspGWI	ACGGA	2 cut(s)	225, 748
TspRI	CASTG	6 cut(s)	331, 597, 628, 868, 994, 1077
Van91I	CCANNNNNTGG	1 cut(s)	989
Vha464I	CTTAAG	1 cut(s)	832
VneI	GTGCAC	1 cut(s)	978
VpaK11BI	GGWCC	1 cut(s)	207
XceI	RCATGY	1 cut(s)	959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1115
XspI	CTAG	4 cut(s)	711, 885, 1223, 1333
ZrmI	AGTACT	1 cut(s)	800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.