Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006594

Physical Location & Seq

Genomic Coordinates Forward (+)

1831629 .. 1835117

Gene Structure 3489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G018700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGATAAAGTTGATGAGGACATGTCAGACACTAAAGATCATTTTGATGCCAAAAGACCTGATCCATGCCGGGATAATGATGAGGAAATTGTTGAGTCTGATATCGAGTTGGATGCTACTGATGTTGTGGAGCCTGATAATGATCCTCCACAGAAGATGGGAAACCCATCGGTTGAAGTTACAGAAGAAATGCAGGATGCTGCACAAATAGAAAAATCAAAAGCTTTAGATGCCATCTCTGAAGGTAAGCTGGATGAAGCCATAGATCATATAACAGAAGCCATCATGTTGAATCCAACTTCAGCAATATTAAAAGCAACCAGAGCCAGTGTCTTTGTCAAATTGAATAAACCAAATGCAGCAATTCGTGATGCTAATGCCGCTTTAGAGATCAACCCCGACTCTGCAAAAGGATATAAAATAAGAGGAATGGCGAAGGCCATGTTAGGTCACTGGGAAGAAGCGGCAAGTGATCTTAATGTAGCATCAAAGTTAGATTATGATGGGGAGATTGGTTTGGTGCTTAAAAAGGTTGAACCTAATGTCCGCAAAATTGAGGAGCATCGCAGAAAATACGAACGCTTACATAAAGAAAGGGAGATAAAAAGTGCTGAACGTGAGAGAAAGCGGCAAGCCGAAGCTCGAGAACGGGATGCGTTGTCTGCTCTTAAGGATGGTGAAGTCATTGGAATACACTCTGCCAAAGAACTGGAGACAAAGTTGAATGCTGCTTCAAGGACATTGCGGCTTGCAATCCTCTACTTCACCACAAAATGGTGTGGTGCTTGCCGTGTCATATCTCCTTTGTATACAAGCTTAGCTGGAAAGTACCCAAAGGCCGTTTTCTTGAAAGTTGACATAGATGAGGCAAGAGATGTTGCTGCAGACTGGAATATAGGCAGTGTTCCGGCATTTTTCTTTGTAAGGAACGGTAAGGAGGTTGATAAGATGGTGGGGGCAGACAAAACTGCACTAGAAGGGAAGATTGCACAACATGCAGGCTCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0006457 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010286 GO:0016043 GO:0016491 GO:0016667 GO:0016671 GO:0022607 GO:0030544 GO:0031072 GO:0042802 GO:0043933 GO:0044085 GO:0050896 GO:0051259 GO:0055114 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

337

Amino Acids

37.3

Weight (kDa)

5.27

Isoelectric Point (pI)

33.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17880 AT3G17880
fragaria_vesca	FvH4_5g17540 FvH4_5g17540 FvH4_5g17540 FvH4_5g17540
malus_domestica	MD06G1228800.v1.1 MD14G1238000.v1.1
prunus_persica	Prupe.2G018600_v2.0.a1 Prupe.2G018600_v2.0.a1 Prupe.2G018600_v2.0.a1 Prupe.2G018700_v2.0.a1 Prupe.5G235200_v2.0.a1
pyrus_communis	pycom06g20510 pycom14g19910
rosa_chinensis	RchiOBHm_Chr7g0178111
rosa_laevigata	RLG00000005470
rosa_multiflora	Rmu_sc0000425.1_g000010
rosa_roxburghii	Rroxscaffold_3G00275170
rosa_rugosa	Rorug06G0413500 Rorug06G0413600
rosa_samantha	Rh7AG012900 Rh7BG012800 Rh7CG012800 Rh7DG013100
rosa_wichuraiana	Rw7G001020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	774
AccI	GTMKAC	1 cut(s)	809
AciI	CCGC	5 cut(s)	381, 464, 547, 628, 745
AclWI	GGATC	2 cut(s)	56, 137
AcuI	CTGAAG	2 cut(s)	261, 285
AfaI	GTAC	1 cut(s)	830
AfiI	CCNNNNNNNGG	1 cut(s)	774
AflII	CTTAAG	1 cut(s)	668
AflIII	ACRYGT	1 cut(s)	21
AgsI	TTSAA	7 cut(s)	176, 292, 346, 536, 724, 735, 850
AloI	GAACNNNNNNTCC	2 cut(s)	528, 560
AluBI	AGCT	5 cut(s)	224, 250, 641, 816, 821
AluI	AGCT	5 cut(s)	224, 250, 641, 816, 821
Alw26I	GTCTC	1 cut(s)	707
AlwI	GGATC	2 cut(s)	56, 137
Ama87I	CYCGRG	1 cut(s)	642
AoxI	GGCC	2 cut(s)	438, 837
ApeKI	GCWGC	4 cut(s)	200, 359, 728, 881
AsuC2I	CCSGG	1 cut(s)	71
AsuHPI	GGTGA	2 cut(s)	689, 757
AvaI	CYCGRG	1 cut(s)	642
BbvI	GCAGC	4 cut(s)	187, 371, 715, 868
BccI	CCATC	7 cut(s)	151, 175, 242, 290, 497, 668, 943
BceAI	ACGGC	2 cut(s)	774, 824
BcgI	CGANNNNNNTGC	2 cut(s)	95, 129
BcnI	CCSGG	1 cut(s)	71
BcoDI	GTCTC	1 cut(s)	707
BfaI	CTAG	1 cut(s)	974
BfmI	CTRYAG	1 cut(s)	882
BfrI	CTTAAG	1 cut(s)	668
BisI	GCNGC	8 cut(s)	201, 360, 381, 465, 629, 729, 746, 882
BlpI	GCTNAGC	1 cut(s)	817
BlsI	GCNGC	8 cut(s)	202, 361, 382, 466, 630, 730, 747, 883
Bme1390I	CCNGG	1 cut(s)	71
BmeT110I	CYCGRG	1 cut(s)	642
BmiI	GGNNCC	1 cut(s)	132
BmrFI	CCNGG	1 cut(s)	71
BmrI	ACTGGG	1 cut(s)	463
BmsI	GCATC	8 cut(s)	37, 103, 187, 220, 361, 494, 571, 643
BmuI	ACTGGG	1 cut(s)	463
BpmI	CTGGAG	1 cut(s)	731
Bpu1102I	GCTNAGC	1 cut(s)	817
BpuMI	CCSGG	1 cut(s)	71
BsaBI	GATNNNNATC	1 cut(s)	141
BsaXI	ACNNNNNCTCC	2 cut(s)	704, 734
Bsc4I	CCNNNNNNNGG	1 cut(s)	774
Bse1I	ACTGG	4 cut(s)	327, 458, 714, 893
Bse3DI	GCAATG	1 cut(s)	740
Bse8I	GATNNNNATC	1 cut(s)	141
BseGI	GGATG	5 cut(s)	118, 202, 259, 658, 679
BseJI	GATNNNNATC	1 cut(s)	141
BseLI	CCNNNNNNNGG	1 cut(s)	774
BseMI	GCAATG	1 cut(s)	740
BseNI	ACTGG	4 cut(s)	327, 458, 714, 893
BseRI	GAGGAG	1 cut(s)	572
BseXI	GCAGC	4 cut(s)	187, 371, 715, 868
BsgI	GTGCAG	2 cut(s)	186, 954
BshFI	GGCC	2 cut(s)	440, 839
BsiHKCI	CYCGRG	1 cut(s)	642
BsiSI	CCGG	2 cut(s)	70, 908
BslI	CCNNNNNNNGG	1 cut(s)	774
BsmAI	GTCTC	1 cut(s)	707
BsmI	GAATGC	1 cut(s)	730
BsnI	GGCC	2 cut(s)	440, 839
BsoBI	CYCGRG	1 cut(s)	642
Bsp143I	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
Bsp1720I	GCTNAGC	1 cut(s)	817
BspACI	CCGC	5 cut(s)	381, 464, 547, 628, 745
BspANI	GGCC	2 cut(s)	440, 839
BspLI	GGNNCC	1 cut(s)	132
BspMAI	CTGCAG	1 cut(s)	886
BspPI	GGATC	2 cut(s)	56, 137
BspTI	CTTAAG	1 cut(s)	668
BsrDI	GCAATG	1 cut(s)	740
BsrI	ACTGG	4 cut(s)	327, 458, 714, 893
BssMI	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
BssNAI	GTATAC	1 cut(s)	810
Bst1107I	GTATAC	1 cut(s)	810
Bst4CI	ACNGT	1 cut(s)	932
BstAFI	CTTAAG	1 cut(s)	668
BstAPI	GCANNNNNTGC	1 cut(s)	995
BstC8I	GCNNGC	4 cut(s)	633, 750, 787, 1000
BstDEI	CTNAG	1 cut(s)	817
BstF5I	GGATG	5 cut(s)	118, 202, 259, 658, 679
BstKTI	GATC	6 cut(s)	40, 64, 145, 268, 393, 475
BstMAI	GTCTC	1 cut(s)	707
BstMBI	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
BstMWI	GCNNNNNNNGC	5 cut(s)	230, 323, 380, 662, 995
BstNSI	RCATGY	2 cut(s)	25, 998
BstSCI	CCNGG	1 cut(s)	69
BstSFI	CTRYAG	1 cut(s)	882
BstV1I	GCAGC	4 cut(s)	187, 371, 715, 868
BstXI	CCANNNNNNTGG	1 cut(s)	709
BstZ17I	GTATAC	1 cut(s)	810
BsuRI	GGCC	2 cut(s)	440, 839
BtgZI	GCGATG	1 cut(s)	548
BtsCI	GGATG	5 cut(s)	118, 202, 259, 658, 679
BtsI	GCAGTG	1 cut(s)	907
BtsIMutI	CAGTG	3 cut(s)	334, 451, 907
Cac8I	GCNNGC	4 cut(s)	633, 750, 787, 1000
Csp6I	GTAC	1 cut(s)	829
CviAII	CATG	5 cut(s)	22, 66, 286, 442, 995
CviQI	GTAC	1 cut(s)	829
DdeI	CTNAG	1 cut(s)	817
DpnI	GATC	6 cut(s)	39, 63, 144, 267, 392, 474
DpnII	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
Eco32I	GATATC	1 cut(s)	103
Eco57I	CTGAAG	2 cut(s)	261, 285
Eco88I	CYCGRG	1 cut(s)	642
EcoRV	GATATC	1 cut(s)	103
FaeI	CATG	5 cut(s)	25, 69, 289, 445, 998
FatI	CATG	5 cut(s)	21, 65, 285, 441, 994
FblI	GTMKAC	1 cut(s)	809
Fnu4HI	GCNGC	8 cut(s)	201, 360, 381, 465, 629, 729, 746, 882
FokI	GGATG	5 cut(s)	125, 209, 266, 665, 686
Fsp4HI	GCNGC	8 cut(s)	201, 360, 381, 465, 629, 729, 746, 882
FspBI	CTAG	1 cut(s)	974
GluI	GCNGC	8 cut(s)	201, 360, 381, 465, 629, 729, 746, 882
GsuI	CTGGAG	1 cut(s)	731
HaeIII	GGCC	2 cut(s)	440, 839
HapII	CCGG	2 cut(s)	70, 908
Hin1II	CATG	5 cut(s)	25, 69, 289, 445, 998
HincII	GTYRAC	1 cut(s)	856
HindII	GTYRAC	1 cut(s)	856
HindIII	AAGCTT	2 cut(s)	222, 814
HinfI	GANTC	3 cut(s)	95, 292, 401
HpaII	CCGG	2 cut(s)	70, 908
HphI	GGTGA	2 cut(s)	689, 757
Hpy166II	GTNNAC	2 cut(s)	810, 856
Hpy188I	TCNGA	3 cut(s)	28, 100, 241
Hpy188III	TCNNGA	3 cut(s)	368, 644, 847
Hpy8I	GTNNAC	2 cut(s)	810, 856
HpyAV	CCTTC	3 cut(s)	236, 430, 971
HpyCH4III	ACNGT	1 cut(s)	932
HpyCH4IV	ACGT	1 cut(s)	616
HpyCH4V	TGCA	9 cut(s)	193, 203, 359, 407, 752, 884, 971, 989, 998
HpyF10VI	GCNNNNNNNGC	5 cut(s)	230, 323, 380, 662, 995
HpyF3I	CTNAG	1 cut(s)	817
HpySE526I	ACGT	1 cut(s)	616
Hsp92II	CATG	5 cut(s)	25, 69, 289, 445, 998
Kzo9I	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
LmnI	GCTCC	2 cut(s)	130, 559
Lsp1109I	GCAGC	4 cut(s)	187, 371, 715, 868
LweI	GCATC	8 cut(s)	37, 103, 187, 220, 361, 494, 571, 643
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	1 cut(s)	616
MaeIII	GTNAC	2 cut(s)	178, 449
MalI	GATC	6 cut(s)	39, 63, 144, 267, 392, 474
MboI	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
MboII	GAAGA	4 cut(s)	166, 197, 470, 994
MluCI	AATT	4 cut(s)	87, 341, 363, 552
MlyI	GAGTC	2 cut(s)	104, 395
MmeI	TCCRAC	2 cut(s)	90, 320
MnlI	CCTC	8 cut(s)	10, 76, 156, 419, 550, 767, 859, 931
MseI	TTAA	4 cut(s)	311, 477, 525, 669
MslI	CAYNNNNRTG	1 cut(s)	45
MspCI	CTTAAG	1 cut(s)	668
MspI	CCGG	2 cut(s)	70, 908
MspR9I	CCNGG	1 cut(s)	71
Mva1269I	GAATGC	1 cut(s)	730
MwoI	GCNNNNNNNGC	5 cut(s)	230, 323, 380, 662, 995
NciI	CCSGG	1 cut(s)	71
NdeII	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
NlaIII	CATG	5 cut(s)	25, 69, 289, 445, 998
NlaIV	GGNNCC	1 cut(s)	132
NmuCI	GTSAC	1 cut(s)	449
NspI	RCATGY	2 cut(s)	25, 998
PaeR7I	CTCGAG	1 cut(s)	642
PciI	ACATGT	1 cut(s)	21
PctI	GAATGC	1 cut(s)	730
PfeI	GAWTC	1 cut(s)	292
PflMI	CCANNNNNTGG	1 cut(s)	774
PkrI	GCNGC	8 cut(s)	202, 361, 382, 466, 630, 730, 747, 883
PleI	GAGTC	2 cut(s)	103, 395
PpsI	GAGTC	2 cut(s)	103, 395
PscI	ACATGT	1 cut(s)	21
PspN4I	GGNNCC	1 cut(s)	132
PstI	CTGCAG	1 cut(s)	886
RsaI	GTAC	1 cut(s)	830
RsaNI	GTAC	1 cut(s)	829
RseI	CAYNNNNRTG	1 cut(s)	45
SaqAI	TTAA	4 cut(s)	311, 477, 525, 669
SatI	GCNGC	8 cut(s)	201, 360, 381, 465, 629, 729, 746, 882
Sau3AI	GATC	6 cut(s)	37, 61, 142, 265, 390, 472
SchI	GAGTC	2 cut(s)	104, 395
ScrFI	CCNGG	1 cut(s)	71
SfaNI	GCATC	8 cut(s)	37, 103, 187, 220, 361, 494, 571, 643
SfcI	CTRYAG	1 cut(s)	882
Sfr274I	CTCGAG	1 cut(s)	642
SlaI	CTCGAG	1 cut(s)	642
SmiMI	CAYNNNNRTG	1 cut(s)	45
SmlI	CTYRAG	2 cut(s)	642, 668
SmoI	CTYRAG	2 cut(s)	642, 668
Sse9I	AATT	4 cut(s)	87, 341, 363, 552
SsiI	CCGC	5 cut(s)	381, 464, 547, 628, 745
SspI	AATATT	1 cut(s)	309
SspMI	CTAG	1 cut(s)	974
StyD4I	CCNGG	1 cut(s)	69
TaaI	ACNGT	1 cut(s)	932
TaiI	ACGT	1 cut(s)	619
TaqI	TCGA	2 cut(s)	105, 643
TasI	AATT	4 cut(s)	87, 341, 363, 552
TauI	GCSGC	4 cut(s)	383, 467, 631, 748
TfiI	GAWTC	1 cut(s)	292
Tru1I	TTAA	4 cut(s)	311, 477, 525, 669
Tru9I	TTAA	4 cut(s)	311, 477, 525, 669
TscAI	CASTG	3 cut(s)	334, 458, 907
TseFI	GTSAC	1 cut(s)	449
TseI	GCWGC	4 cut(s)	200, 359, 728, 881
Tsp45I	GTSAC	1 cut(s)	449
TspDTI	ATGAA	1 cut(s)	270
TspRI	CASTG	3 cut(s)	334, 458, 907
Van91I	CCANNNNNTGG	1 cut(s)	774
Vha464I	CTTAAG	1 cut(s)	668
XceI	RCATGY	2 cut(s)	25, 998
XhoI	CTCGAG	1 cut(s)	642
XmiI	GTMKAC	1 cut(s)	809
XspI	CTAG	1 cut(s)	974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.