Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005469

Physical Location & Seq

Genomic Coordinates Reverse (-)

6770564 .. 6777727

Gene Structure 7164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G056800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGGGATACAGACAATGGGTTCTCAAGGTGGGGCTGATGGAAATTGCAAACAGTCGCAGTTCCAGCCTTTGGCACGACAAAGCTCAATTTACAGTCTCACGCTTGATGAGGTACAAAATCAGTTAGGTGACTTGGGGAAGCCACTCAGCAGCATGAACCTTGACGAGCTTCTAAAAAATGTATGGAGTGCTGAGGCCAACCAGACCATGGGTATGGACATTGAAGGCACTACACTGGTCAATCAAGCTACACTGCAGCGTCAGGCAAGCCTGTCATTAACTAGTGCATTGAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATTCAACAAAGCAAAAATAATGAGGAAAAGAAATCTCAAGAACGACAACGTACTTTGGGAGAGATGACTTTAGAGGATTTCTTGGTAAAAGCGGGAGTTGTTGCTGAAGCTGAAGCATCTTCAGACAAAAAGTGTTCTGCTCCTCTTGCCGTGGTTGATGCGAATGTGGCGTCTCAGTTTCCACAAGGTCAGTGGCTGCAGTACCAACAACCACAGTATCAGCATCCACAACAAAGTATGATGGGGGTATACATGCCAAGCCAACCTATTCCACCGCCACTGCACATAGGGGCTGGTGCTATAATGGAAGTGCCGTATCCTGACAACCAAGTTGCGTTGCCTTCACCCTTAATGGGTACATTATCAGATACACAGACACCTGGGAGGAAAAGAGGCAACCCAGAGGACATAGTTGAGAAGACCGTTGAACGGAGACAGAAAAGAATGATAAAGAACCGAGAATCTGCTGCTCGTTCACGAGCACGAAAGCAGGCTTATACAAATGAACTGGAGAACAAAGTTTCACGTCTAGAGGAGGAAAATGAAAGGCTAAGGAAACAGAAGGAGCTAGAGAAGGTGTTGCCAAGTGCACCACCGCCCGAGCCAAAGTATCAGCTTCGTAGAACGACGTCAGCTCCATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

323

Amino Acids

35.94

Weight (kDa)

7.68

Isoelectric Point (pI)

55.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41070 AT2G41070 AT2G41070 AT2G41070 AT2G41070 AT3G56850
fragaria_vesca	FvH4_7g04850 FvH4_7g04850 FvH4_7g04850 FvH4_7g04850 FvH4_7g04850 FvH4_7g04850
malus_domestica	MD02G1266800.v1.1 MD07G1052500.v1.1
prunus_persica	Prupe.2G056800_v2.0.a1 Prupe.2G056800_v2.0.a1 Prupe.2G056800_v2.0.a1
pyrus_communis	pycom02g22840 pycom07g04090
rosa_chinensis	RchiOBHm_Chr1g0330441
rosa_laevigata	RLG00000029810
rosa_multiflora	Rmu_sc0007290.1_g000007
rosa_roxburghii	Rroxscaffold_4G00319940
rosa_rugosa	Rorug01G0089000
rosa_samantha	Rh1AG107000 Rh1BG085100 Rh1CG102900 Rh1DG112500
rosa_wichuraiana	Rw1G008540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	956
AccB7I	CCANNNNNTGG	2 cut(s)	70, 208
AccI	GTMKAC	1 cut(s)	573
AciI	CCGC	3 cut(s)	416, 599, 920
AcuI	CTGAAG	3 cut(s)	429, 450, 456
AcyI	GRCGYC	2 cut(s)	494, 953
AfaI	GTAC	4 cut(s)	114, 376, 527, 682
AfiI	CCNNNNNNNGG	4 cut(s)	70, 208, 677, 753
AgsI	TTSAA	3 cut(s)	224, 329, 752
AhlI	ACTAGT	1 cut(s)	281
AjiI	CACGTC	1 cut(s)	851
AjnI	CCWGG	1 cut(s)	703
AluBI	AGCT	7 cut(s)	84, 169, 248, 434, 892, 940, 959
AluI	AGCT	7 cut(s)	84, 169, 248, 434, 892, 940, 959
Alw21I	GWGCWC	2 cut(s)	808, 916
Alw26I	GTCTC	3 cut(s)	101, 501, 751
Alw44I	GTGCAC	1 cut(s)	912
AlwNI	CAGNNNCTG	1 cut(s)	520
Ama87I	CYCGRG	1 cut(s)	923
AoxI	GGCC	1 cut(s)	195
ApaLI	GTGCAC	1 cut(s)	912
ApeKI	GCWGC	4 cut(s)	150, 256, 520, 791
ArsI	GACNNNNNNTTYG	2 cut(s)	479, 511
AsuHPI	GGTGA	2 cut(s)	140, 660
AvaI	CYCGRG	1 cut(s)	923
BaeGI	GKGCMC	1 cut(s)	916
BaeI	ACNNNNGTAYC	2 cut(s)	524, 557
BauI	CACGAG	1 cut(s)	801
BbsI	GAAGAC	2 cut(s)	305, 749
Bbv12I	GWGCWC	2 cut(s)	808, 916
BbvCI	CCTCAGC	1 cut(s)	192
BbvI	GCAGC	4 cut(s)	162, 268, 507, 778
BccI	CCATC	2 cut(s)	32, 559
BceAI	ACGGC	2 cut(s)	458, 622
BciT130I	CCWGG	1 cut(s)	705
BciVI	GTATCC	1 cut(s)	651
BcoDI	GTCTC	3 cut(s)	101, 501, 751
BcuI	ACTAGT	1 cut(s)	281
BfaI	CTAG	3 cut(s)	282, 854, 893
BfmI	CTRYAG	2 cut(s)	254, 521
BfuI	GTATCC	1 cut(s)	651
BisI	GCNGC	4 cut(s)	151, 257, 521, 792
BlsI	GCNGC	4 cut(s)	152, 258, 522, 793
Bme1390I	CCNGG	1 cut(s)	705
BmeT110I	CYCGRG	1 cut(s)	923
BmgBI	CACGTC	1 cut(s)	851
BmrFI	CCNGG	1 cut(s)	705
BmsI	GCATC	3 cut(s)	449, 472, 556
BpiI	GAAGAC	2 cut(s)	305, 749
BpmI	CTGGAG	1 cut(s)	854
Bpu10I	CCTNAGC	2 cut(s)	192, 875
BpuEI	CTTGAG	2 cut(s)	9, 345
BsaHI	GRCGYC	2 cut(s)	494, 953
BsaJI	CCNNGG	3 cut(s)	207, 474, 704
BsaXI	ACNNNNNCTCC	1 cut(s)	943
Bsc4I	CCNNNNNNNGG	4 cut(s)	70, 208, 677, 753
Bse1I	ACTGG	2 cut(s)	240, 837
BseBI	CCWGG	1 cut(s)	705
BseDI	CCNNGG	3 cut(s)	207, 474, 704
BseGI	GGATG	1 cut(s)	547
BseLI	CCNNNNNNNGG	4 cut(s)	70, 208, 677, 753
BseMII	CTCAG	3 cut(s)	160, 183, 512
BseNI	ACTGG	2 cut(s)	240, 837
BseRI	GAGGAG	2 cut(s)	456, 872
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	4 cut(s)	162, 268, 507, 778
BsgI	GTGCAG	1 cut(s)	590
BshFI	GGCC	1 cut(s)	197
BsiHKAI	GWGCWC	2 cut(s)	808, 916
BsiHKCI	CYCGRG	1 cut(s)	923
BslI	CCNNNNNNNGG	4 cut(s)	70, 208, 677, 753
BsmAI	GTCTC	3 cut(s)	101, 501, 751
BsmBI	CGTCTC	1 cut(s)	501
BsnI	GGCC	1 cut(s)	197
BsoBI	CYCGRG	1 cut(s)	923
Bsp1286I	GDGCHC	2 cut(s)	808, 916
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	3 cut(s)	416, 599, 920
BspANI	GGCC	1 cut(s)	197
BspCNI	CTCAG	3 cut(s)	159, 184, 511
BspMAI	CTGCAG	2 cut(s)	258, 525
BsrI	ACTGG	2 cut(s)	240, 837
BssECI	CCNNGG	3 cut(s)	207, 474, 704
BssNAI	GTATAC	1 cut(s)	574
BssNI	GRCGYC	2 cut(s)	494, 953
BssSI	CACGAG	1 cut(s)	801
BssT1I	CCWWGG	1 cut(s)	207
Bst1107I	GTATAC	1 cut(s)	574
Bst2BI	CACGAG	1 cut(s)	801
Bst2UI	CCWGG	1 cut(s)	705
Bst4CI	ACNGT	5 cut(s)	54, 95, 304, 540, 748
BstACI	GRCGYC	2 cut(s)	494, 953
BstC8I	GCNNGC	2 cut(s)	268, 816
BstDEI	CTNAG	4 cut(s)	146, 192, 498, 875
BstDSI	CCRYGG	2 cut(s)	207, 474
BstF5I	GGATG	1 cut(s)	547
BstMAI	GTCTC	3 cut(s)	101, 501, 751
BstMWI	GCNNNNNNNGC	3 cut(s)	64, 470, 491
BstNI	CCWGG	1 cut(s)	705
BstNSI	RCATGY	1 cut(s)	580
BstSCI	CCNGG	1 cut(s)	703
BstSFI	CTRYAG	2 cut(s)	254, 521
BstSLI	GKGCMC	1 cut(s)	916
BstV1I	GCAGC	4 cut(s)	162, 268, 507, 778
BstV2I	GAAGAC	2 cut(s)	305, 749
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstZ17I	GTATAC	1 cut(s)	574
BsuI	GTATCC	1 cut(s)	651
BsuRI	GGCC	1 cut(s)	197
BtgI	CCRYGG	2 cut(s)	207, 474
BtrI	CACGTC	1 cut(s)	851
BtsCI	GGATG	1 cut(s)	547
BtsI	GCAGTG	2 cut(s)	251, 602
BtsIMutI	CAGTG	4 cut(s)	233, 251, 521, 602
Cac8I	GCNNGC	2 cut(s)	268, 816
CaiI	CAGNNNCTG	1 cut(s)	520
CseI	GACGC	2 cut(s)	248, 483
Csp6I	GTAC	4 cut(s)	113, 375, 526, 681
CspCI	CAANNNNNGTGG	2 cut(s)	497, 532
CviAII	CATG	3 cut(s)	154, 208, 577
CviQI	GTAC	4 cut(s)	113, 375, 526, 681
DdeI	CTNAG	4 cut(s)	146, 192, 498, 875
Eco130I	CCWWGG	1 cut(s)	207
Eco57I	CTGAAG	3 cut(s)	429, 450, 456
Eco88I	CYCGRG	1 cut(s)	923
EcoRII	CCWGG	1 cut(s)	703
EcoT14I	CCWWGG	1 cut(s)	207
ErhI	CCWWGG	1 cut(s)	207
Esp3I	CGTCTC	1 cut(s)	501
FaeI	CATG	3 cut(s)	157, 211, 580
FatI	CATG	3 cut(s)	153, 207, 576
FauI	CCCGC	1 cut(s)	409
FblI	GTMKAC	1 cut(s)	573
Fnu4HI	GCNGC	4 cut(s)	151, 257, 521, 792
FokI	GGATG	1 cut(s)	534
Fsp4HI	GCNGC	4 cut(s)	151, 257, 521, 792
FspBI	CTAG	3 cut(s)	282, 854, 893
GluI	GCNGC	4 cut(s)	151, 257, 521, 792
GsuI	CTGGAG	1 cut(s)	854
HaeIII	GGCC	1 cut(s)	197
HgaI	GACGC	2 cut(s)	248, 483
Hin1I	GRCGYC	2 cut(s)	494, 953
Hin1II	CATG	3 cut(s)	157, 211, 580
HinfI	GANTC	1 cut(s)	785
HphI	GGTGA	2 cut(s)	140, 660
Hpy166II	GTNNAC	3 cut(s)	574, 800, 914
Hpy188I	TCNGA	2 cut(s)	448, 691
Hpy188III	TCNNGA	4 cut(s)	362, 644, 801, 854
Hpy8I	GTNNAC	3 cut(s)	574, 800, 914
Hpy99I	CGWCG	1 cut(s)	955
HpyAV	CCTTC	4 cut(s)	218, 675, 880, 892
HpyCH4III	ACNGT	5 cut(s)	54, 95, 304, 540, 748
HpyCH4IV	ACGT	3 cut(s)	373, 850, 953
HpyCH4V	TGCA	6 cut(s)	48, 256, 287, 523, 607, 914
HpyF10VI	GCNNNNNNNGC	3 cut(s)	64, 470, 491
HpyF3I	CTNAG	4 cut(s)	146, 192, 498, 875
HpySE526I	ACGT	3 cut(s)	373, 850, 953
Hsp92I	GRCGYC	2 cut(s)	494, 953
Hsp92II	CATG	3 cut(s)	157, 211, 580
LmnI	GCTCC	3 cut(s)	469, 889, 964
Lsp1109I	GCAGC	4 cut(s)	162, 268, 507, 778
LweI	GCATC	3 cut(s)	449, 472, 556
MaeI	CTAG	3 cut(s)	282, 854, 893
MaeII	ACGT	3 cut(s)	373, 850, 953
MaeIII	GTNAC	1 cut(s)	128
MboII	GAAGA	3 cut(s)	310, 435, 754
MhlI	GDGCHC	2 cut(s)	808, 916
MluCI	AATT	2 cut(s)	43, 87
MseI	TTAA	2 cut(s)	278, 674
MslI	CAYNNNNRTG	1 cut(s)	212
MspR9I	CCNGG	1 cut(s)	705
MvaI	CCWGG	1 cut(s)	705
MwoI	GCNNNNNNNGC	3 cut(s)	64, 470, 491
NcoI	CCATGG	1 cut(s)	207
NlaIII	CATG	3 cut(s)	157, 211, 580
NmuCI	GTSAC	1 cut(s)	128
NspI	RCATGY	1 cut(s)	580
PfeI	GAWTC	1 cut(s)	785
PflMI	CCANNNNNTGG	2 cut(s)	70, 208
PkrI	GCNGC	4 cut(s)	152, 258, 522, 793
Psp6I	CCWGG	1 cut(s)	703
PspGI	CCWGG	1 cut(s)	703
PstI	CTGCAG	2 cut(s)	258, 525
PstNI	CAGNNNCTG	1 cut(s)	520
RsaI	GTAC	4 cut(s)	114, 376, 527, 682
RsaNI	GTAC	4 cut(s)	113, 375, 526, 681
RseI	CAYNNNNRTG	1 cut(s)	212
SaqAI	TTAA	2 cut(s)	278, 674
SatI	GCNGC	4 cut(s)	151, 257, 521, 792
ScrFI	CCNGG	1 cut(s)	705
SduI	GDGCHC	2 cut(s)	808, 916
SfaNI	GCATC	3 cut(s)	449, 472, 556
SfcI	CTRYAG	2 cut(s)	254, 521
SmiMI	CAYNNNNRTG	1 cut(s)	212
SmlI	CTYRAG	2 cut(s)	24, 360
SmoI	CTYRAG	2 cut(s)	24, 360
SpeI	ACTAGT	1 cut(s)	281
Sse9I	AATT	2 cut(s)	43, 87
SsiI	CCGC	3 cut(s)	416, 599, 920
SspMI	CTAG	3 cut(s)	282, 854, 893
StyD4I	CCNGG	1 cut(s)	703
StyI	CCWWGG	1 cut(s)	207
TaaI	ACNGT	5 cut(s)	54, 95, 304, 540, 748
TaiI	ACGT	3 cut(s)	376, 853, 956
TasI	AATT	2 cut(s)	43, 87
TfiI	GAWTC	1 cut(s)	785
Tru1I	TTAA	2 cut(s)	278, 674
Tru9I	TTAA	2 cut(s)	278, 674
TscAI	CASTG	4 cut(s)	240, 258, 521, 609
TseFI	GTSAC	1 cut(s)	128
TseI	GCWGC	4 cut(s)	150, 256, 520, 791
Tsp45I	GTSAC	1 cut(s)	128
TspDTI	ATGAA	3 cut(s)	170, 843, 882
TspGWI	ACGGA	1 cut(s)	769
TspRI	CASTG	4 cut(s)	240, 258, 521, 609
Van91I	CCANNNNNTGG	2 cut(s)	70, 208
VneI	GTGCAC	1 cut(s)	912
XbaI	TCTAGA	1 cut(s)	853
XceI	RCATGY	1 cut(s)	580
XcmI	CCANNNNNNNNNTGG	2 cut(s)	205, 513
XmiI	GTMKAC	1 cut(s)	573
XspI	CTAG	3 cut(s)	282, 854, 893
ZraI	GACGTC	1 cut(s)	954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.