pycom02g22840
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0005469
Physical Location & Seq
Forward (+)
20998456 .. 21003951
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22840.3

Sequence Viewer

Length: 582 bp
ATGACTTTGGAGGATTTCTTGGTCAAAGCCGGAGTTGTTGCTGAAGCTGAAGCATCTTCAGACAAAAAATATGCTGATCCTCTTGTTGGGGTTGATGCGAATGTGGCAGCACAGTTGTCACAAGGTCAGTGGATGCAGTACCCACAACCACAATATCAGCATCCACAACAAAGTATGATGGGGGTATACATGCCAAGCCAACCTTTACCACCGCCAATGCACGTAGGTGCTGGAGCTATGATGGAAGTGCCGTATCCTGACAACCAAGTTGCGGTGCCTTCACCCTTAATGGGTACGTTATCAGATACGCAGACACCTGGGAGGAAAAGAGGCAACCCTGATGACATAGTTGAGAAGACTGTTGAGCGAAGGCAAAAGAGAATGATAAAGAACCGGGAATCTGCTGCGCGTTCGCGAGCAAGGAAGCAGGCGTATACAAATGAACTGGAGAACAAAGTTTCACGTCTGGAGGAGGAAAATGAAAGGCTAAGGAAACAGAAGGAGCAAGAGAAGGTGTTGCCGAGTGCTCCGCCTCCGGAGCCAAAGTACCAGCTTCGTAGAACGACATCATCTCCATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

194

Amino Acids

21.75

Weight (kDa)

9.04

Isoelectric Point (pI)

66.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 274
AccI GTMKAC 2 cut(s) 186, 434
AccII CGCG 2 cut(s) 409, 415
AccIII TCCGGA 1 cut(s) 535
AciI CCGC 3 cut(s) 212, 272, 530
AclWI GGATC 1 cut(s) 71
AcuI CTGAAG 3 cut(s) 42, 63, 69
AfaI GTAC 3 cut(s) 140, 295, 548
AfiI CCNNNNNNNGG 3 cut(s) 86, 271, 290
AjiI CACGTC 1 cut(s) 464
AjnI CCWGG 1 cut(s) 316
AleI CACNNNNGTG 1 cut(s) 225
AluBI AGCT 3 cut(s) 47, 236, 553
AluI AGCT 3 cut(s) 47, 236, 553
Alw21I GWGCWC 1 cut(s) 529
AlwI GGATC 1 cut(s) 71
Aor13HI TCCGGA 1 cut(s) 535
ApeKI GCWGC 2 cut(s) 107, 404
AspLEI GCGC 1 cut(s) 409
AsuC2I CCSGG 1 cut(s) 395
AsuHPI GGTGA 1 cut(s) 273
BanI GGYRCC 1 cut(s) 274
BbsI GAAGAC 1 cut(s) 362
Bbv12I GWGCWC 1 cut(s) 529
BbvI GCAGC 2 cut(s) 119, 391
BccI CCATC 2 cut(s) 172, 235
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 1 cut(s) 318
BciVI GTATCC 1 cut(s) 264
BcnI CCSGG 1 cut(s) 395
BfuI GTATCC 1 cut(s) 264
BisI GCNGC 2 cut(s) 108, 405
BlsI GCNGC 2 cut(s) 109, 406
Bme1390I CCNGG 2 cut(s) 318, 395
BmgBI CACGTC 1 cut(s) 464
BmiI GGNNCC 2 cut(s) 276, 540
BmrFI CCNGG 2 cut(s) 318, 395
BmsI GCATC 4 cut(s) 62, 85, 123, 169
BpiI GAAGAC 1 cut(s) 362
BpmI CTGGAG 3 cut(s) 252, 467, 488
Bpu10I CCTNAGC 1 cut(s) 488
BpuMI CCSGG 1 cut(s) 395
BsaAI YACGTR 1 cut(s) 223
BsaJI CCNNGG 1 cut(s) 317
BsaWI WCCGGW 1 cut(s) 535
BsaXI ACNNNNNCTCC 3 cut(s) 530, 556, 560
Bsc4I CCNNNNNNNGG 3 cut(s) 86, 271, 290
Bse1I ACTGG 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 535
BseBI CCWGG 1 cut(s) 318
BseDI CCNNGG 1 cut(s) 317
BseGI GGATG 2 cut(s) 138, 160
BseLI CCNNNNNNNGG 3 cut(s) 86, 271, 290
BseNI ACTGG 1 cut(s) 450
BseRI GAGGAG 1 cut(s) 485
BseXI GCAGC 2 cut(s) 119, 391
Bsh1236I CGCG 2 cut(s) 409, 415
BshNI GGYRCC 1 cut(s) 274
BsiHKAI GWGCWC 1 cut(s) 529
BsiSI CCGG 3 cut(s) 30, 394, 536
BslI CCNNNNNNNGG 3 cut(s) 86, 271, 290
Bsp1286I GDGCHC 1 cut(s) 529
Bsp13I TCCGGA 1 cut(s) 535
Bsp143I GATC 1 cut(s) 76
Bsp68I TCGCGA 1 cut(s) 415
BspACI CCGC 3 cut(s) 212, 272, 530
BspEI TCCGGA 1 cut(s) 535
BspFNI CGCG 2 cut(s) 409, 415
BspLI GGNNCC 2 cut(s) 276, 540
BspPI GGATC 1 cut(s) 71
BspT107I GGYRCC 1 cut(s) 274
BsrI ACTGG 1 cut(s) 450
BssECI CCNNGG 1 cut(s) 317
BssMI GATC 1 cut(s) 76
BssNAI GTATAC 2 cut(s) 187, 435
Bst1107I GTATAC 2 cut(s) 187, 435
Bst2UI CCWGG 1 cut(s) 318
Bst4CI ACNGT 2 cut(s) 114, 361
BstBAI YACGTR 1 cut(s) 223
BstC8I GCNNGC 2 cut(s) 417, 429
BstDEI CTNAG 1 cut(s) 488
BstF5I GGATG 2 cut(s) 138, 160
BstFNI CGCG 2 cut(s) 409, 415
BstHHI GCGC 1 cut(s) 409
BstKTI GATC 1 cut(s) 79
BstMBI GATC 1 cut(s) 76
BstMWI GCNNNNNNNGC 2 cut(s) 104, 538
BstNI CCWGG 1 cut(s) 318
BstNSI RCATGY 1 cut(s) 193
BstSCI CCNGG 2 cut(s) 316, 393
BstUI CGCG 2 cut(s) 409, 415
BstV1I GCAGC 2 cut(s) 119, 391
BstV2I GAAGAC 1 cut(s) 362
BstZ17I GTATAC 2 cut(s) 187, 435
BsuI GTATCC 1 cut(s) 264
BtrI CACGTC 1 cut(s) 464
BtsCI GGATG 2 cut(s) 138, 160
BtsIMutI CAGTG 1 cut(s) 134
BtuMI TCGCGA 1 cut(s) 415
Cac8I GCNNGC 2 cut(s) 417, 429
CfoI GCGC 1 cut(s) 409
Csp6I GTAC 3 cut(s) 139, 294, 547
CspCI CAANNNNNGTGG 2 cut(s) 110, 145
CviAII CATG 1 cut(s) 190
CviJI RGCY 7 cut(s) 29, 47, 198, 236, 487, 541, 553
CviKI_1 RGCY 7 cut(s) 29, 47, 198, 236, 487, 541, 553
CviQI GTAC 3 cut(s) 139, 294, 547
DdeI CTNAG 1 cut(s) 488
DpnI GATC 1 cut(s) 78
DpnII GATC 1 cut(s) 76
EciI GGCGGA 1 cut(s) 519
Eco57I CTGAAG 3 cut(s) 42, 63, 69
EcoRII CCWGG 1 cut(s) 316
FaeI CATG 1 cut(s) 193
FaiI YATR 7 cut(s) 72, 176, 187, 191, 239, 347, 435
FalI AAGNNNNNCTT 2 cut(s) 187, 219
FatI CATG 1 cut(s) 189
FblI GTMKAC 2 cut(s) 186, 434
Fnu4HI GCNGC 2 cut(s) 108, 405
FokI GGATG 2 cut(s) 145, 147
Fsp4HI GCNGC 2 cut(s) 108, 405
GlaI GCGC 1 cut(s) 408
GluI GCNGC 2 cut(s) 108, 405
GsuI CTGGAG 3 cut(s) 252, 467, 488
HapII CCGG 3 cut(s) 30, 394, 536
HhaI GCGC 1 cut(s) 409
Hin1II CATG 1 cut(s) 193
Hin6I GCGC 1 cut(s) 407
HinP1I GCGC 1 cut(s) 407
HinfI GANTC 1 cut(s) 398
HpaII CCGG 3 cut(s) 30, 394, 536
HphI GGTGA 1 cut(s) 273
Hpy166II GTNNAC 2 cut(s) 187, 435
Hpy188I TCNGA 3 cut(s) 61, 304, 581
Hpy188III TCNNGA 4 cut(s) 257, 414, 467, 536
Hpy8I GTNNAC 2 cut(s) 187, 435
HpyAV CCTTC 4 cut(s) 288, 363, 493, 505
HpyCH4III ACNGT 2 cut(s) 114, 361
HpyCH4IV ACGT 3 cut(s) 222, 296, 463
HpyCH4V TGCA 2 cut(s) 136, 220
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 538
HpyF3I CTNAG 1 cut(s) 488
HpySE526I ACGT 3 cut(s) 222, 296, 463
Hsp92II CATG 1 cut(s) 193
HspAI GCGC 1 cut(s) 407
Kpn2I TCCGGA 1 cut(s) 535
Kzo9I GATC 1 cut(s) 76
LmnI GCTCC 4 cut(s) 233, 502, 532, 538
Lsp1109I GCAGC 2 cut(s) 119, 391
LweI GCATC 4 cut(s) 62, 85, 123, 169
MaeII ACGT 3 cut(s) 222, 296, 463
MaeIII GTNAC 1 cut(s) 117
MalI GATC 1 cut(s) 78
MboI GATC 1 cut(s) 76
MboII GAAGA 2 cut(s) 48, 367
MhlI GDGCHC 1 cut(s) 529
MnlI CCTC 7 cut(s) 4, 90, 315, 323, 463, 466, 543
MroI TCCGGA 1 cut(s) 535
MseI TTAA 1 cut(s) 287
MslI CAYNNNNRTG 1 cut(s) 225
MspI CCGG 3 cut(s) 30, 394, 536
MspR9I CCNGG 2 cut(s) 318, 395
MvaI CCWGG 1 cut(s) 318
MvnI CGCG 2 cut(s) 409, 415
MwoI GCNNNNNNNGC 2 cut(s) 104, 538
NciI CCSGG 1 cut(s) 395
NdeII GATC 1 cut(s) 76
NlaIII CATG 1 cut(s) 193
NlaIV GGNNCC 2 cut(s) 276, 540
NmeAIII GCCGAG 1 cut(s) 546
NmuCI GTSAC 1 cut(s) 117
NruI TCGCGA 1 cut(s) 415
NspI RCATGY 1 cut(s) 193
OliI CACNNNNGTG 1 cut(s) 225
PfeI GAWTC 1 cut(s) 398
PkrI GCNGC 2 cut(s) 109, 406
Ppu21I YACGTR 1 cut(s) 223
Psp6I CCWGG 1 cut(s) 316
PspGI CCWGG 1 cut(s) 316
PspN4I GGNNCC 2 cut(s) 276, 540
RruI TCGCGA 1 cut(s) 415
RsaI GTAC 3 cut(s) 140, 295, 548
RsaNI GTAC 3 cut(s) 139, 294, 547
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 1 cut(s) 287
SatI GCNGC 2 cut(s) 108, 405
Sau3AI GATC 1 cut(s) 76
ScrFI CCNGG 2 cut(s) 318, 395
SduI GDGCHC 1 cut(s) 529
SfaNI GCATC 4 cut(s) 62, 85, 123, 169
SmiMI CAYNNNNRTG 1 cut(s) 225
SsiI CCGC 3 cut(s) 212, 272, 530
StyD4I CCNGG 2 cut(s) 316, 393
TaaI ACNGT 2 cut(s) 114, 361
TaiI ACGT 3 cut(s) 225, 299, 466
TfiI GAWTC 1 cut(s) 398
Tru1I TTAA 1 cut(s) 287
Tru9I TTAA 1 cut(s) 287
TscAI CASTG 1 cut(s) 134
TseFI GTSAC 1 cut(s) 117
TseI GCWGC 2 cut(s) 107, 404
Tsp45I GTSAC 1 cut(s) 117
TspDTI ATGAA 2 cut(s) 456, 495
TspRI CASTG 1 cut(s) 134
XceI RCATGY 1 cut(s) 193
XmiI GTMKAC 2 cut(s) 186, 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.