Protein FAR1-RELATED SEQUENCE 3-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g04941 FvH4_7g04941 FvH4_7g04941 |
| malus_domestica | MD02G1265400.v1.1 MD07G1054000.v1.1 |
| prunus_persica | Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 |
| pyrus_communis | pycom07g04180 |
| rosa_chinensis | RchiOBHm_Chr1g0331031 RchiOBHm_Chr1g0338891 |
| rosa_multiflora | Rmu_co8407023.1_g000001 Rmu_sc0002515.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00031570 Rroxscaffold_4G00313750 Rroxscaffold_4G00319540 |
| rosa_rugosa | Rorug01G0091800 |
| rosa_samantha | Rh1AG113400 Rh1BG087300 Rh1CG110300 Rh1DG119100 |
| rosa_wichuraiana | Rw1G009250 Rw3G019960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 789 |
| AccB1I | GGYRCC | 1 cut(s) | 2204 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 409, 2253 |
| AccI | GTMKAC | 3 cut(s) | 1369, 1508, 1717 |
| AccII | CGCG | 1 cut(s) | 1054 |
| AciI | CCGC | 1 cut(s) | 1054 |
| AclWI | GGATC | 1 cut(s) | 2264 |
| AcoI | YGGCCR | 1 cut(s) | 2295 |
| AcsI | RAATTY | 3 cut(s) | 97, 161, 2272 |
| AcuI | CTGAAG | 2 cut(s) | 30, 1487 |
| AfaI | GTAC | 6 cut(s) | 250, 842, 1294, 1391, 1464, 2355 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 152, 409, 551, 866, 942, 2094, 2253 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AjnI | CCWGG | 3 cut(s) | 70, 206, 703 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1505, 1537 |
| AleI | CACNNNNGTG | 1 cut(s) | 11 |
| Alw21I | GWGCWC | 2 cut(s) | 1454, 1951 |
| Alw26I | GTCTC | 8 cut(s) | 476, 538, 571, 1163, 1663, 1919, 2191, 2339 |
| Alw44I | GTGCAC | 1 cut(s) | 1450 |
| AlwI | GGATC | 1 cut(s) | 2264 |
| AoxI | GGCC | 8 cut(s) | 605, 623, 1272, 2082, 2096, 2178, 2295, 2403 |
| ApaI | GGGCCC | 1 cut(s) | 1276 |
| ApaLI | GTGCAC | 1 cut(s) | 1450 |
| ApoI | RAATTY | 3 cut(s) | 97, 161, 2272 |
| AspLEI | GCGC | 1 cut(s) | 1866 |
| AspS9I | GGNCC | 8 cut(s) | 263, 394, 427, 605, 1272, 1273, 2083, 2179 |
| AsuHPI | GGTGA | 8 cut(s) | 86, 578, 812, 1470, 1595, 1747, 1753, 2186 |
| AsuII | TTCGAA | 2 cut(s) | 165, 1185 |
| AvaII | GGWCC | 3 cut(s) | 263, 394, 427 |
| BaeGI | GKGCMC | 3 cut(s) | 1276, 1454, 2209 |
| BanI | GGYRCC | 1 cut(s) | 2204 |
| BanII | GRGCYC | 2 cut(s) | 1276, 1402 |
| BbsI | GAAGAC | 4 cut(s) | 924, 1475, 1726, 2049 |
| Bbv12I | GWGCWC | 2 cut(s) | 1454, 1951 |
| BceAI | ACGGC | 2 cut(s) | 610, 2282 |
| BciT130I | CCWGG | 3 cut(s) | 72, 208, 705 |
| BciVI | GTATCC | 1 cut(s) | 1718 |
| BcoDI | GTCTC | 8 cut(s) | 476, 538, 571, 1163, 1663, 1919, 2191, 2339 |
| BfaI | CTAG | 9 cut(s) | 420, 630, 777, 917, 1403, 1817, 2013, 2025, 2587 |
| BfmI | CTRYAG | 5 cut(s) | 573, 999, 1241, 1678, 2337 |
| BfuI | GTATCC | 1 cut(s) | 1718 |
| BglII | AGATCT | 1 cut(s) | 773 |
| BmcAI | AGTACT | 1 cut(s) | 1464 |
| Bme1390I | CCNGG | 3 cut(s) | 72, 208, 705 |
| Bme18I | GGWCC | 3 cut(s) | 263, 394, 427 |
| BmgT120I | GGNCC | 8 cut(s) | 263, 394, 427, 605, 1272, 1273, 2083, 2179 |
| BmiI | GGNNCC | 5 cut(s) | 1274, 1275, 2085, 2181, 2206 |
| BmrFI | CCNGG | 3 cut(s) | 72, 208, 705 |
| BmrI | ACTGGG | 1 cut(s) | 1271 |
| BmsI | GCATC | 8 cut(s) | 187, 481, 646, 678, 757, 793, 1164, 1208 |
| BmuI | ACTGGG | 1 cut(s) | 1271 |
| BoxI | GACNNNNGTC | 1 cut(s) | 752 |
| BpiI | GAAGAC | 4 cut(s) | 924, 1475, 1726, 2049 |
| BpmI | CTGGAG | 1 cut(s) | 2567 |
| Bpu14I | TTCGAA | 2 cut(s) | 165, 1185 |
| BpuEI | CTTGAG | 2 cut(s) | 1229, 2402 |
| Bsa29I | ATCGAT | 1 cut(s) | 2399 |
| BsaAI | YACGTR | 1 cut(s) | 344 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2163 |
| BsaJI | CCNNGG | 5 cut(s) | 703, 1321, 1840, 2099, 2247 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2136, 2166, 2548, 2578 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 152, 409, 551, 866, 942, 2094, 2253 |
| Bse1I | ACTGG | 6 cut(s) | 871, 1107, 1241, 1277, 1460, 1596 |
| Bse3DI | GCAATG | 5 cut(s) | 337, 1274, 1947, 2111, 2498 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2163 |
| BseBI | CCWGG | 3 cut(s) | 72, 208, 705 |
| BseCI | ATCGAT | 1 cut(s) | 2399 |
| BseDI | CCNNGG | 5 cut(s) | 703, 1321, 1840, 2099, 2247 |
| BseGI | GGATG | 4 cut(s) | 133, 496, 1123, 1199 |
| BseJI | GATNNNNATC | 1 cut(s) | 2163 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 152, 409, 551, 866, 942, 2094, 2253 |
| BseMI | GCAATG | 5 cut(s) | 337, 1274, 1947, 2111, 2498 |
| BseMII | CTCAG | 3 cut(s) | 471, 1217, 2033 |
| BseNI | ACTGG | 6 cut(s) | 871, 1107, 1241, 1277, 1460, 1596 |
| BseRI | GAGGAG | 2 cut(s) | 188, 2157 |
| BseSI | GKGCMC | 3 cut(s) | 1276, 1454, 2209 |
| BseYI | CCCAGC | 3 cut(s) | 589, 2171, 2285 |
| BsgI | GTGCAG | 1 cut(s) | 2412 |
| Bsh1236I | CGCG | 1 cut(s) | 1054 |
| BshFI | GGCC | 8 cut(s) | 607, 625, 1274, 2084, 2098, 2180, 2297, 2405 |
| BshNI | GGYRCC | 1 cut(s) | 2204 |
| BshVI | ATCGAT | 1 cut(s) | 2399 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1454, 1951 |
| BslFI | GGGAC | 2 cut(s) | 293, 833 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 152, 409, 551, 866, 942, 2094, 2253 |
| BsmAI | GTCTC | 8 cut(s) | 476, 538, 571, 1163, 1663, 1919, 2191, 2339 |
| BsmBI | CGTCTC | 1 cut(s) | 2191 |
| BsmFI | GGGAC | 2 cut(s) | 293, 833 |
| BsmI | GAATGC | 1 cut(s) | 478 |
| BsnI | GGCC | 8 cut(s) | 607, 625, 1274, 2084, 2098, 2180, 2297, 2405 |
| Bsp119I | TTCGAA | 2 cut(s) | 165, 1185 |
| Bsp120I | GGGCCC | 1 cut(s) | 1272 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1276, 1402, 1454, 1951, 2209 |
| Bsp143I | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| Bsp19I | CCATGG | 1 cut(s) | 2247 |
| BspACI | CCGC | 1 cut(s) | 1054 |
| BspANI | GGCC | 8 cut(s) | 607, 625, 1274, 2084, 2098, 2180, 2297, 2405 |
| BspCNI | CTCAG | 3 cut(s) | 472, 1218, 2032 |
| BspDI | ATCGAT | 1 cut(s) | 2399 |
| BspFNI | CGCG | 1 cut(s) | 1054 |
| BspLI | GGNNCC | 5 cut(s) | 1274, 1275, 2085, 2181, 2206 |
| BspMAI | CTGCAG | 3 cut(s) | 1245, 1682, 2341 |
| BspPI | GGATC | 1 cut(s) | 2264 |
| BspT104I | TTCGAA | 2 cut(s) | 165, 1185 |
| BspT107I | GGYRCC | 1 cut(s) | 2204 |
| BsrDI | GCAATG | 5 cut(s) | 337, 1274, 1947, 2111, 2498 |
| BsrI | ACTGG | 6 cut(s) | 871, 1107, 1241, 1277, 1460, 1596 |
| BssECI | CCNNGG | 5 cut(s) | 703, 1321, 1840, 2099, 2247 |
| BssMI | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| BssNAI | GTATAC | 2 cut(s) | 1370, 1509 |
| BssT1I | CCWWGG | 4 cut(s) | 1321, 1840, 2099, 2247 |
| Bst1107I | GTATAC | 2 cut(s) | 1370, 1509 |
| Bst2UI | CCWGG | 3 cut(s) | 72, 208, 705 |
| Bst4CI | ACNGT | 6 cut(s) | 368, 1732, 1741, 2224, 2502, 2514 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1946 |
| BstBAI | YACGTR | 1 cut(s) | 344 |
| BstBI | TTCGAA | 2 cut(s) | 165, 1185 |
| BstC8I | GCNNGC | 4 cut(s) | 693, 1245, 1675, 2341 |
| BstDEI | CTNAG | 5 cut(s) | 141, 252, 480, 1226, 2019 |
| BstDSI | CCRYGG | 1 cut(s) | 2247 |
| BstF5I | GGATG | 4 cut(s) | 133, 496, 1123, 1199 |
| BstFNI | CGCG | 1 cut(s) | 1054 |
| BstHHI | GCGC | 1 cut(s) | 1866 |
| BstKTI | GATC | 4 cut(s) | 776, 1222, 2259, 2399 |
| BstMAI | GTCTC | 8 cut(s) | 476, 538, 571, 1163, 1663, 1919, 2191, 2339 |
| BstMBI | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1946 |
| BstNI | CCWGG | 3 cut(s) | 72, 208, 705 |
| BstNSI | RCATGY | 4 cut(s) | 152, 215, 291, 1864 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 752 |
| BstSCI | CCNGG | 3 cut(s) | 70, 206, 703 |
| BstSFI | CTRYAG | 5 cut(s) | 573, 999, 1241, 1678, 2337 |
| BstSLI | GKGCMC | 3 cut(s) | 1276, 1454, 2209 |
| BstSNI | TACGTA | 1 cut(s) | 344 |
| BstUI | CGCG | 1 cut(s) | 1054 |
| BstV2I | GAAGAC | 4 cut(s) | 924, 1475, 1726, 2049 |
| BstX2I | RGATCY | 1 cut(s) | 773 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2324 |
| BstYI | RGATCY | 1 cut(s) | 773 |
| BstZ17I | GTATAC | 2 cut(s) | 1370, 1509 |
| Bsu15I | ATCGAT | 1 cut(s) | 2399 |
| BsuI | GTATCC | 1 cut(s) | 1718 |
| BsuRI | GGCC | 8 cut(s) | 607, 625, 1274, 2084, 2098, 2180, 2297, 2405 |
| BsuTUI | ATCGAT | 1 cut(s) | 2399 |
| BtgI | CCRYGG | 1 cut(s) | 2247 |
| BtgZI | GCGATG | 2 cut(s) | 1798, 2105 |
| BtsCI | GGATG | 4 cut(s) | 133, 496, 1123, 1199 |
| BtsI | GCAGTG | 3 cut(s) | 1057, 1254, 2063 |
| BtsIMutI | CAGTG | 7 cut(s) | 6, 63, 864, 1057, 1254, 2063, 2510 |
| Cac8I | GCNNGC | 4 cut(s) | 693, 1245, 1675, 2341 |
| CfoI | GCGC | 1 cut(s) | 1866 |
| Cfr13I | GGNCC | 8 cut(s) | 263, 394, 427, 605, 1272, 1273, 2083, 2179 |
| ClaI | ATCGAT | 1 cut(s) | 2399 |
| CsiI | ACCWGGT | 1 cut(s) | 70 |
| Csp6I | GTAC | 6 cut(s) | 249, 841, 1293, 1390, 1463, 2354 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1902, 1937 |
| CviQI | GTAC | 6 cut(s) | 249, 841, 1293, 1390, 1463, 2354 |
| DdeI | CTNAG | 5 cut(s) | 141, 252, 480, 1226, 2019 |
| DpnI | GATC | 4 cut(s) | 775, 1221, 2258, 2398 |
| DpnII | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| EaeI | YGGCCR | 1 cut(s) | 2295 |
| Eco105I | TACGTA | 1 cut(s) | 344 |
| Eco130I | CCWWGG | 4 cut(s) | 1321, 1840, 2099, 2247 |
| Eco24I | GRGCYC | 2 cut(s) | 1276, 1402 |
| Eco47I | GGWCC | 3 cut(s) | 263, 394, 427 |
| Eco57I | CTGAAG | 2 cut(s) | 30, 1487 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1273 |
| EcoRI | GAATTC | 2 cut(s) | 161, 2272 |
| EcoRII | CCWGG | 3 cut(s) | 70, 206, 703 |
| EcoT14I | CCWWGG | 4 cut(s) | 1321, 1840, 2099, 2247 |
| EcoT22I | ATGCAT | 1 cut(s) | 202 |
| EcoT38I | GRGCYC | 2 cut(s) | 1276, 1402 |
| ErhI | CCWWGG | 4 cut(s) | 1321, 1840, 2099, 2247 |
| Esp3I | CGTCTC | 1 cut(s) | 2191 |
| FaqI | GGGAC | 2 cut(s) | 293, 833 |
| FauNDI | CATATG | 1 cut(s) | 1064 |
| FblI | GTMKAC | 3 cut(s) | 1369, 1508, 1717 |
| FokI | GGATG | 4 cut(s) | 140, 503, 1110, 1186 |
| FriOI | GRGCYC | 2 cut(s) | 1276, 1402 |
| FspBI | CTAG | 9 cut(s) | 420, 630, 777, 917, 1403, 1817, 2013, 2025, 2587 |
| GlaI | GCGC | 1 cut(s) | 1865 |
| GsaI | CCCAGC | 3 cut(s) | 593, 2175, 2289 |
| GsuI | CTGGAG | 1 cut(s) | 2567 |
| HaeIII | GGCC | 8 cut(s) | 607, 625, 1274, 2084, 2098, 2180, 2297, 2405 |
| HhaI | GCGC | 1 cut(s) | 1866 |
| Hin6I | GCGC | 1 cut(s) | 1864 |
| HinP1I | GCGC | 1 cut(s) | 1864 |
| HincII | GTYRAC | 1 cut(s) | 613 |
| HindII | GTYRAC | 1 cut(s) | 613 |
| HindIII | AAGCTT | 1 cut(s) | 980 |
| HinfI | GANTC | 9 cut(s) | 167, 187, 598, 923, 929, 1187, 1354, 2164, 2485 |
| HpaI | GTTAAC | 1 cut(s) | 613 |
| HphI | GGTGA | 8 cut(s) | 86, 578, 812, 1470, 1595, 1747, 1753, 2186 |
| Hpy166II | GTNNAC | 6 cut(s) | 508, 613, 1370, 1452, 1509, 1718 |
| Hpy188I | TCNGA | 8 cut(s) | 172, 888, 928, 1168, 1227, 1663, 1689, 1834 |
| Hpy8I | GTNNAC | 6 cut(s) | 508, 613, 1370, 1452, 1509, 1718 |
| HpyAV | CCTTC | 6 cut(s) | 446, 1082, 1137, 1214, 1769, 1901 |
| HpyCH4III | ACNGT | 6 cut(s) | 368, 1732, 1741, 2224, 2502, 2514 |
| HpyCH4IV | ACGT | 2 cut(s) | 318, 343 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1946 |
| HpyF3I | CTNAG | 5 cut(s) | 141, 252, 480, 1226, 2019 |
| HpySE526I | ACGT | 2 cut(s) | 318, 343 |
| HspAI | GCGC | 1 cut(s) | 1864 |
| KspAI | GTTAAC | 1 cut(s) | 613 |
| Kzo9I | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| LmnI | GCTCC | 2 cut(s) | 862, 2319 |
| LweI | GCATC | 8 cut(s) | 187, 481, 646, 678, 757, 793, 1164, 1208 |
| MabI | ACCWGGT | 1 cut(s) | 70 |
| MaeI | CTAG | 9 cut(s) | 420, 630, 777, 917, 1403, 1817, 2013, 2025, 2587 |
| MaeII | ACGT | 2 cut(s) | 318, 343 |
| MaeIII | GTNAC | 6 cut(s) | 271, 584, 1645, 1741, 2002, 2374 |
| MalI | GATC | 4 cut(s) | 775, 1221, 2258, 2398 |
| MboI | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| MboII | GAAGA | 9 cut(s) | 68, 659, 697, 924, 1214, 1480, 1726, 2054, 2065 |
| MfeI | CAATTG | 3 cut(s) | 267, 1173, 1914 |
| MflI | RGATCY | 1 cut(s) | 773 |
| MhlI | GDGCHC | 5 cut(s) | 1276, 1402, 1454, 1951, 2209 |
| MlyI | GAGTC | 3 cut(s) | 181, 932, 938 |
| MmeI | TCCRAC | 2 cut(s) | 748, 1792 |
| Mph1103I | ATGCAT | 1 cut(s) | 202 |
| MslI | CAYNNNNRTG | 2 cut(s) | 11, 2199 |
| MspA1I | CMGCKG | 3 cut(s) | 479, 1683, 2285 |
| MspR9I | CCNGG | 3 cut(s) | 72, 208, 705 |
| MunI | CAATTG | 3 cut(s) | 267, 1173, 1914 |
| Mva1269I | GAATGC | 1 cut(s) | 478 |
| MvaI | CCWGG | 3 cut(s) | 72, 208, 705 |
| MvnI | CGCG | 1 cut(s) | 1054 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1946 |
| NcoI | CCATGG | 1 cut(s) | 2247 |
| NdeI | CATATG | 1 cut(s) | 1064 |
| NdeII | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| NlaIV | GGNNCC | 5 cut(s) | 1274, 1275, 2085, 2181, 2206 |
| NmuCI | GTSAC | 5 cut(s) | 271, 584, 1645, 1741, 2002 |
| NsiI | ATGCAT | 1 cut(s) | 202 |
| NspI | RCATGY | 4 cut(s) | 152, 215, 291, 1864 |
| NspV | TTCGAA | 2 cut(s) | 165, 1185 |
| OliI | CACNNNNGTG | 1 cut(s) | 11 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PctI | GAATGC | 1 cut(s) | 478 |
| PfeI | GAWTC | 6 cut(s) | 167, 598, 1187, 1354, 2164, 2485 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 409, 2253 |
| PleI | GAGTC | 3 cut(s) | 181, 931, 937 |
| PpsI | GAGTC | 3 cut(s) | 181, 931, 937 |
| Ppu21I | YACGTR | 1 cut(s) | 344 |
| PscI | ACATGT | 1 cut(s) | 148 |
| PshAI | GACNNNNGTC | 1 cut(s) | 752 |
| PsiI | TTATAA | 1 cut(s) | 789 |
| Psp6I | CCWGG | 3 cut(s) | 70, 206, 703 |
| PspFI | CCCAGC | 3 cut(s) | 589, 2171, 2285 |
| PspGI | CCWGG | 3 cut(s) | 70, 206, 703 |
| PspN4I | GGNNCC | 5 cut(s) | 1274, 1275, 2085, 2181, 2206 |
| PspOMI | GGGCCC | 1 cut(s) | 1272 |
| PspPI | GGNCC | 8 cut(s) | 263, 394, 427, 605, 1272, 1273, 2083, 2179 |
| PstI | CTGCAG | 3 cut(s) | 1245, 1682, 2341 |
| PsuI | RGATCY | 1 cut(s) | 773 |
| PvuII | CAGCTG | 3 cut(s) | 479, 1683, 2285 |
| RsaI | GTAC | 6 cut(s) | 250, 842, 1294, 1391, 1464, 2355 |
| RsaNI | GTAC | 6 cut(s) | 249, 841, 1293, 1390, 1463, 2354 |
| RseI | CAYNNNNRTG | 2 cut(s) | 11, 2199 |
| Sau3AI | GATC | 4 cut(s) | 773, 1219, 2256, 2396 |
| Sau96I | GGNCC | 8 cut(s) | 263, 394, 427, 605, 1272, 1273, 2083, 2179 |
| SbfI | CCTGCAGG | 1 cut(s) | 2341 |
| ScaI | AGTACT | 1 cut(s) | 1464 |
| SchI | GAGTC | 3 cut(s) | 181, 932, 938 |
| ScrFI | CCNGG | 3 cut(s) | 72, 208, 705 |
| SdaI | CCTGCAGG | 1 cut(s) | 2341 |
| SduI | GDGCHC | 5 cut(s) | 1276, 1402, 1454, 1951, 2209 |
| SexAI | ACCWGGT | 1 cut(s) | 70 |
| SfaNI | GCATC | 8 cut(s) | 187, 481, 646, 678, 757, 793, 1164, 1208 |
| SfcI | CTRYAG | 5 cut(s) | 573, 999, 1241, 1678, 2337 |
| SfuI | TTCGAA | 2 cut(s) | 165, 1185 |
| SinI | GGWCC | 3 cut(s) | 263, 394, 427 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 11, 2199 |
| SmlI | CTYRAG | 2 cut(s) | 1208, 2381 |
| SmoI | CTYRAG | 2 cut(s) | 1208, 2381 |
| SnaBI | TACGTA | 1 cut(s) | 344 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2341 |
| SsiI | CCGC | 1 cut(s) | 1054 |
| SspI | AATATT | 1 cut(s) | 1700 |
| SspMI | CTAG | 9 cut(s) | 420, 630, 777, 917, 1403, 1817, 2013, 2025, 2587 |
| StyD4I | CCNGG | 3 cut(s) | 70, 206, 703 |
| StyI | CCWWGG | 4 cut(s) | 1321, 1840, 2099, 2247 |
| TaaI | ACNGT | 6 cut(s) | 368, 1732, 1741, 2224, 2502, 2514 |
| TaiI | ACGT | 2 cut(s) | 321, 346 |
| TaqI | TCGA | 8 cut(s) | 165, 293, 439, 634, 829, 1185, 1261, 2399 |
| TatI | WGTACW | 1 cut(s) | 1462 |
| TauI | GCSGC | 1 cut(s) | 1057 |
| TfiI | GAWTC | 6 cut(s) | 167, 598, 1187, 1354, 2164, 2485 |
| TscAI | CASTG | 7 cut(s) | 13, 70, 871, 1064, 1254, 2070, 2517 |
| TseFI | GTSAC | 5 cut(s) | 271, 584, 1645, 1741, 2002 |
| Tsp45I | GTSAC | 5 cut(s) | 271, 584, 1645, 1741, 2002 |
| TspDTI | ATGAA | 8 cut(s) | 555, 986, 1401, 1635, 1682, 1836, 2066, 2498 |
| TspGWI | ACGGA | 2 cut(s) | 1152, 2569 |
| TspRI | CASTG | 7 cut(s) | 13, 70, 871, 1064, 1254, 2070, 2517 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 409, 2253 |
| VneI | GTGCAC | 1 cut(s) | 1450 |
| VpaK11BI | GGWCC | 3 cut(s) | 263, 394, 427 |
| XapI | RAATTY | 3 cut(s) | 97, 161, 2272 |
| XbaI | TCTAGA | 2 cut(s) | 916, 1402 |
| XceI | RCATGY | 4 cut(s) | 152, 215, 291, 1864 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 273 |
| XmiI | GTMKAC | 3 cut(s) | 1369, 1508, 1717 |
| XspI | CTAG | 9 cut(s) | 420, 630, 777, 917, 1403, 1817, 2013, 2025, 2587 |
| ZrmI | AGTACT | 1 cut(s) | 1464 |
| Zsp2I | ATGCAT | 1 cut(s) | 202 |