Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002515.1

Orthogroup ID

OG0003477

Physical Location & Seq

Genomic Coordinates Forward (+)

45854 .. 52093

Gene Structure 6240 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002515.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

atggacactcaagttttggcagatgttgaagcggaagacagggaacgtcacgggacagtagactctgaatctgataaaggggtaaagcaaaatgtaaatgatagttttgcagggagagaaataattgcacaggatgaggatgggaatgctaaaccatatgtgggaatggagttcgaatcagaggatgctgccaaggctctctatgaggcgtatgctaggtgtgctggttttagcacccatgttggtcagtttagtcgtaacaagcctgatggaccaatagtgacatgggaatttgcatgttcaagagaggtattcaaaagaaagaatgttgaaagttgcaatgctatgctacgcgtagagagaaaagatgcaaacacttgggttgccactaagtttattgaggaccacaaccattcgatggaaagtccaaataaagtccattaccttcgaccgcgtagacactttgcaggtgctacaaagaatacagctgagactttggatgtcacttctgatgcttatgtctctatggatgggaatcctgtcccttatgaaccaaatcgtggaggtaggagcgtctctcctgttgaacaaaatcaccccgcaaggaattttgggcctattaactgtacaaggccttctagccggaagagaacgcttggaagagatgctcaaaatcttctaaactatttcaagaagatgcaggctgaaaatcctggattttattatgctatacagcttgatgatgaaaaccgcatgactaatgttttctggactgatgcgagatcgaggaccgcttacaactactttggagatgctgtaatatttgatacaatgtatcgaccaaatcagtaccaggtaccgtttgctccttttaccggtgtaaatcatcatggccagatggtattgtttggctgtgcattacttctagatgagtctgagtcttcctttacttggctgtttaagacatggctttctgcaatgaatgatcgacctcctatttctataactaccgaccaagatagagcaatacaagtggcagtagcgcaggtattcccagatgcgcgccactgtatatgcaagtggcacattttaagagaaggccaagaaagattggctcatatatatcttgctaatccttccttttatggagagctgtatagctgcatcaacttttcagagacaattgaggattttgaatcgtcatgggtgtccattcttgatagatatgaccttcggagaaatgattggctgcaggcagtgtataatgctcgaaagcagtgggccccagtttattttcgtgggactttctttgctgcaatttcctcaaatcaaggagttagatctttctttgatggctatgtgaatcaacagacgagtgtacctctgttctttaagcagtatgaaagggctctggagcatgcattagaaaaagaaatagaagcagattatgatacaatttgcaccacaccagtactgaagacaccatcaccaatggaacaacaggcagctagcttgtatacaaaaaaagtattttctaagtttcaggaggaattagttgaaacttttgtctatactgcaaataagatagatggagatgggcttgccagtaaatacagggttgcgaagtatgaacatgatgacaaggcttatatagtcgaactaaatgtctcagagatgaaagcaagctgcagctgtcaaatgtttgaatatgctggcatcctctgtagacatattttgactgtcttcaccgtcaccaatgttcttacccttccatcacattacatattgaagcgatggacaaggaatgccaaatcttgggttggagtagatgaacagatctcagatccgcaaggtgttgagatgctcactgtgcggttcaacaatttatgtcaggaagccattaaatatgcggaagaaggggcagttgctgtagagacttacaatgcagcaatgattgctctacgagacagtgggaaaaagattgctgatttgaagaaaaatgttgctaaagttgtacctcctagctctcagggtagtggaagtattcaggaagaaaatatgaaaaaagcttctttgccatttggtgaaatggtccccccattgtggccttggcaagaagcattgccacatcgctttaatcttaatgatgtcggagttcctgtttctgatataaatcagcctagcatggcgggctctattcaacccgatggtgggcatcctgataatacggtggtttatacttgcttcaagtccatgacatggttcatagaaaataagaattcaacatcagctggaaaagttgctgttattaacttgaagctgcaagattatcgcaagaacccggcaggagaaacagatgtacaatttagggtaaccagggttacactagagcctatgttaagatcgatggcctacattggtcagcaactttctgcaccagccaacagagttgctgttatcaatctcaagcttcaagatacaaatacaacatctggagaaacagaagtcaagtttcaagtgtccagagatacactagattccatgttgagatcaatggcttacatccgtgaacaactatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COMM_domain FAR1 MULE SWIM

Protein Analysis

859

Amino Acids

97.49

Weight (kDa)

5.87

Isoelectric Point (pI)

44.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003477)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g04941 FvH4_7g04941 FvH4_7g04941
malus_domestica	MD02G1265400.v1.1 MD07G1054000.v1.1
prunus_persica	Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1 Prupe.2G058900_v2.0.a1
pyrus_communis	pycom07g04180
rosa_chinensis	RchiOBHm_Chr1g0331031 RchiOBHm_Chr1g0338891
rosa_multiflora	Rmu_co8407023.1_g000001 Rmu_sc0002515.1_g000008
rosa_roxburghii	Rroxscaffold_1G00031570 Rroxscaffold_4G00313750 Rroxscaffold_4G00319540
rosa_rugosa	Rorug01G0091800
rosa_samantha	Rh1AG113400 Rh1BG087300 Rh1CG110300 Rh1DG119100
rosa_wichuraiana	Rw1G009250 Rw3G019960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	458
Acc36I	ACCTGC	2 cut(s)	458, 1036
Acc65I	GGTACC	1 cut(s)	856
AccB1I	GGYRCC	1 cut(s)	856
AccB7I	CCANNNNNTGG	4 cut(s)	418, 560, 1815, 2259
AccI	GTMKAC	4 cut(s)	60, 457, 1517, 1726
AccII	CGCG	3 cut(s)	354, 454, 1063
AciI	CCGC	9 cut(s)	32, 452, 600, 751, 792, 1847, 1873, 1910, 2189
AclWI	GGATC	1 cut(s)	1838
AcoI	YGGCCR	1 cut(s)	892
AcsI	RAATTY	3 cut(s)	290, 607, 2278
AcuI	CTGAAG	1 cut(s)	1496
AfaI	GTAC	7 cut(s)	628, 851, 858, 1380, 1473, 2016, 2361
AflIII	ACRYGT	1 cut(s)	352
AgeI	ACCGGT	1 cut(s)	875
AjnI	CCWGG	3 cut(s)	712, 852, 2375
Alw26I	GTCTC	7 cut(s)	485, 526, 580, 1172, 1672, 1928, 1959
AlwI	GGATC	1 cut(s)	1838
AlwNI	CAGNNNCTG	1 cut(s)	1928
AoxI	GGCC	7 cut(s)	614, 632, 892, 1099, 1281, 2105, 2409
ApaI	GGGCCC	1 cut(s)	1285
ApeKI	GCWGC	9 cut(s)	188, 1161, 1249, 1313, 1505, 1686, 1689, 1946, 2320
ApoI	RAATTY	3 cut(s)	290, 607, 2278
ArsI	GACNNNNNNTTYG	2 cut(s)	1650, 1682
AsiGI	ACCGGT	1 cut(s)	875
Asp718I	GGTACC	1 cut(s)	856
AspLEI	GCGC	3 cut(s)	1045, 1063, 1065
AspS9I	GGNCC	7 cut(s)	272, 403, 614, 789, 1281, 1282, 2092
AsuC2I	CCSGG	1 cut(s)	2342
AsuHPI	GGTGA	5 cut(s)	587, 1479, 1738, 1744, 2096
AsuII	TTCGAA	1 cut(s)	174
AsuNHI	GCTAGC	1 cut(s)	1508
AvaII	GGWCC	4 cut(s)	272, 403, 789, 2092
BaeGI	GKGCMC	1 cut(s)	1285
BaeI	ACNNNNGTAYC	2 cut(s)	1362, 1395
BalI	TGGCCA	1 cut(s)	894
BanI	GGYRCC	1 cut(s)	856
BanII	GRGCYC	3 cut(s)	1285, 1411, 2195
BarI	GAAGNNNNNNTAC	2 cut(s)	619, 651
BbsI	GAAGAC	4 cut(s)	42, 933, 1484, 1735
BbvI	GCAGC	9 cut(s)	175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BcgI	CGANNNNNNTGC	2 cut(s)	2312, 2346
BciT130I	CCWGG	3 cut(s)	714, 854, 2377
BcnI	CCSGG	1 cut(s)	2342
BcoDI	GTCTC	7 cut(s)	485, 526, 580, 1172, 1672, 1928, 1959
BfaI	CTAG	8 cut(s)	216, 639, 926, 1509, 2022, 2181, 2387, 2534
BfmI	CTRYAG	4 cut(s)	1250, 1687, 1723, 1929
BfuAI	ACCTGC	2 cut(s)	458, 1036
BglII	AGATCT	2 cut(s)	1340, 1836
BisI	GCNGC	9 cut(s)	189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
BlsI	GCNGC	9 cut(s)	190, 1163, 1251, 1315, 1507, 1688, 1691, 1948, 2322
BmcAI	AGTACT	1 cut(s)	1473
Bme1390I	CCNGG	4 cut(s)	714, 854, 2342, 2377
Bme18I	GGWCC	4 cut(s)	272, 403, 789, 2092
BmgT120I	GGNCC	7 cut(s)	272, 403, 614, 789, 1281, 1282, 2092
BmiI	GGNNCC	4 cut(s)	858, 1283, 1284, 2094
BmrFI	CCNGG	4 cut(s)	714, 854, 2342, 2377
BmrI	ACTGGG	1 cut(s)	1280
BmtI	GCTAGC	1 cut(s)	1512
BmuI	ACTGGG	1 cut(s)	1280
BpiI	GAAGAC	4 cut(s)	42, 933, 1484, 1735
BplI	GAGNNNNNCTC	4 cut(s)	562, 594, 1366, 1398
BpmI	CTGGAG	2 cut(s)	1433, 2514
Bpu14I	TTCGAA	1 cut(s)	174
BpuEI	CTTGAG	1 cut(s)	2450
BpuMI	CCSGG	1 cut(s)	2342
Bsa29I	ATCGAT	1 cut(s)	2405
BsaBI	GATNNNNATC	2 cut(s)	534, 2172
BsaJI	CCNNGG	3 cut(s)	192, 2108, 2376
BsaWI	WCCGGW	1 cut(s)	875
BsaXI	ACNNNNNCTCC	4 cut(s)	801, 831, 2145, 2175
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	3 cut(s)	1286, 1469, 1605
Bse3DI	GCAATG	4 cut(s)	346, 984, 1956, 2120
Bse8I	GATNNNNATC	2 cut(s)	534, 2172
BseBI	CCWGG	3 cut(s)	714, 854, 2377
BseCI	ATCGAT	1 cut(s)	2405
BseDI	CCNNGG	3 cut(s)	192, 2108, 2376
BseGI	GGATG	8 cut(s)	139, 145, 190, 505, 535, 1716, 2215, 2562
BseJI	GATNNNNATC	2 cut(s)	534, 2172
BseMI	GCAATG	4 cut(s)	346, 984, 1956, 2120
BseMII	CTCAG	5 cut(s)	480, 927, 1683, 1854, 2042
BseNI	ACTGG	3 cut(s)	1286, 1469, 1605
BsePI	GCGCGC	1 cut(s)	1061
BseSI	GKGCMC	1 cut(s)	1285
BseXI	GCAGC	9 cut(s)	175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BsgI	GTGCAG	1 cut(s)	2418
Bsh1236I	CGCG	3 cut(s)	354, 454, 1063
Bsh1285I	CGRYCG	1 cut(s)	452
BshFI	GGCC	7 cut(s)	616, 634, 894, 1101, 1283, 2107, 2411
BshNI	GGYRCC	1 cut(s)	856
BshTI	ACCGGT	1 cut(s)	875
BshVI	ATCGAT	1 cut(s)	2405
BsiEI	CGRYCG	1 cut(s)	452
BsiSI	CCGG	3 cut(s)	643, 876, 2342
BslFI	GGGAC	4 cut(s)	67, 527, 1315, 2078
BsmAI	GTCTC	7 cut(s)	485, 526, 580, 1172, 1672, 1928, 1959
BsmBI	CGTCTC	1 cut(s)	580
BsmFI	GGGAC	4 cut(s)	67, 527, 1315, 2078
BsmI	GAATGC	2 cut(s)	151, 1810
BsnI	GGCC	7 cut(s)	616, 634, 894, 1101, 1283, 2107, 2411
Bsp119I	TTCGAA	1 cut(s)	174
Bsp120I	GGGCCC	1 cut(s)	1281
Bsp1286I	GDGCHC	3 cut(s)	1285, 1411, 2195
Bsp1407I	TGTACA	2 cut(s)	626, 2359
Bsp143I	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
BspACI	CCGC	9 cut(s)	32, 452, 600, 751, 792, 1847, 1873, 1910, 2189
BspANI	GGCC	7 cut(s)	616, 634, 894, 1101, 1283, 2107, 2411
BspCNI	CTCAG	5 cut(s)	481, 928, 1682, 1853, 2041
BspDI	ATCGAT	1 cut(s)	2405
BspFNI	CGCG	3 cut(s)	354, 454, 1063
BspLI	GGNNCC	4 cut(s)	858, 1283, 1284, 2094
BspMAI	CTGCAG	2 cut(s)	1254, 1691
BspMI	ACCTGC	2 cut(s)	458, 1036
BspOI	GCTAGC	1 cut(s)	1512
BspPI	GGATC	1 cut(s)	1838
BspT104I	TTCGAA	1 cut(s)	174
BspT107I	GGYRCC	1 cut(s)	856
BsrDI	GCAATG	4 cut(s)	346, 984, 1956, 2120
BsrFI	RCCGGY	1 cut(s)	875
BsrGI	TGTACA	2 cut(s)	626, 2359
BsrI	ACTGG	3 cut(s)	1286, 1469, 1605
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	3 cut(s)	192, 2108, 2376
BssHII	GCGCGC	1 cut(s)	1061
BssMI	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
BssNAI	GTATAC	1 cut(s)	1518
BssT1I	CCWWGG	2 cut(s)	192, 2108
Bst1107I	GTATAC	1 cut(s)	1518
Bst2UI	CCWGG	3 cut(s)	714, 854, 2377
Bst4CI	ACNGT	9 cut(s)	58, 626, 861, 1070, 1741, 1750, 1870, 1970, 2230
Bst6I	CTCTTC	2 cut(s)	641, 655
BstAPI	GCANNNNNTGC	1 cut(s)	1955
BstAUI	TGTACA	2 cut(s)	626, 2359
BstBI	TTCGAA	1 cut(s)	174
BstC8I	GCNNGC	9 cut(s)	702, 1063, 1254, 1419, 1510, 1602, 1684, 1714, 2191
BstDEI	CTNAG	7 cut(s)	390, 489, 936, 1536, 1669, 1840, 2028
BstEII	GGTNACC	1 cut(s)	2371
BstF5I	GGATG	8 cut(s)	139, 145, 190, 505, 535, 1716, 2215, 2562
BstFNI	CGCG	3 cut(s)	354, 454, 1063
BstHHI	GCGC	3 cut(s)	1045, 1063, 1065
BstKTI	GATC	7 cut(s)	785, 988, 1343, 1839, 1846, 2405, 2552
BstMAI	GTCTC	7 cut(s)	485, 526, 580, 1172, 1672, 1928, 1959
BstMBI	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
BstMCI	CGRYCG	1 cut(s)	452
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 221, 1870, 1955, 2190
BstNI	CCWGG	3 cut(s)	714, 854, 2377
BstNSI	RCATGY	2 cut(s)	300, 1421
BstPI	GGTNACC	1 cut(s)	2371
BstSCI	CCNGG	4 cut(s)	712, 852, 2340, 2375
BstSFI	CTRYAG	4 cut(s)	1250, 1687, 1723, 1929
BstSLI	GKGCMC	1 cut(s)	1285
BstUI	CGCG	3 cut(s)	354, 454, 1063
BstV1I	GCAGC	9 cut(s)	175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BstV2I	GAAGAC	4 cut(s)	42, 933, 1484, 1735
BstX2I	RGATCY	3 cut(s)	1340, 1836, 1843
BstYI	RGATCY	3 cut(s)	1340, 1836, 1843
BstZ17I	GTATAC	1 cut(s)	1518
Bsu15I	ATCGAT	1 cut(s)	2405
BsuRI	GGCC	7 cut(s)	616, 634, 894, 1101, 1283, 2107, 2411
BsuTUI	ATCGAT	1 cut(s)	2405
BtgZI	GCGATG	2 cut(s)	1807, 2114
BtsCI	GGATG	8 cut(s)	139, 145, 190, 505, 535, 1716, 2215, 2562
BtsI	GCAGTG	2 cut(s)	1263, 1283
BtsIMutI	CAGTG	5 cut(s)	1066, 1263, 1283, 1866, 1975
BveI	ACCTGC	2 cut(s)	458, 1036
Cac8I	GCNNGC	9 cut(s)	702, 1063, 1254, 1419, 1510, 1602, 1684, 1714, 2191
CaiI	CAGNNNCTG	1 cut(s)	1928
CfoI	GCGC	3 cut(s)	1045, 1063, 1065
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	7 cut(s)	272, 403, 614, 789, 1281, 1282, 2092
ClaI	ATCGAT	1 cut(s)	2405
CseI	GACGC	1 cut(s)	562
CsiI	ACCWGGT	1 cut(s)	852
Csp6I	GTAC	7 cut(s)	627, 850, 857, 1379, 1472, 2015, 2360
CspAI	ACCGGT	1 cut(s)	875
CspCI	CAANNNNNGTGG	2 cut(s)	1014, 1049
CviQI	GTAC	7 cut(s)	627, 850, 857, 1379, 1472, 2015, 2360
DdeI	CTNAG	7 cut(s)	390, 489, 936, 1536, 1669, 1840, 2028
DpnI	GATC	7 cut(s)	784, 987, 1342, 1838, 1845, 2404, 2551
DpnII	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
EaeI	YGGCCR	1 cut(s)	892
Eam1104I	CTCTTC	2 cut(s)	641, 655
EarI	CTCTTC	2 cut(s)	641, 655
Eco130I	CCWWGG	2 cut(s)	192, 2108
Eco147I	AGGCCT	1 cut(s)	634
Eco24I	GRGCYC	3 cut(s)	1285, 1411, 2195
Eco47I	GGWCC	4 cut(s)	272, 403, 789, 2092
Eco57I	CTGAAG	1 cut(s)	1496
Eco91I	GGTNACC	1 cut(s)	2371
EcoO109I	RGGNCCY	1 cut(s)	1282
EcoO65I	GGTNACC	1 cut(s)	2371
EcoRI	GAATTC	1 cut(s)	2278
EcoRII	CCWGG	3 cut(s)	712, 852, 2375
EcoT14I	CCWWGG	2 cut(s)	192, 2108
EcoT22I	ATGCAT	1 cut(s)	1423
EcoT38I	GRGCYC	3 cut(s)	1285, 1411, 2195
ErhI	CCWWGG	2 cut(s)	192, 2108
Esp3I	CGTCTC	1 cut(s)	580
FaqI	GGGAC	4 cut(s)	67, 527, 1315, 2078
FauI	CCCGC	2 cut(s)	607, 2182
FauNDI	CATATG	1 cut(s)	157
FblI	GTMKAC	4 cut(s)	60, 457, 1517, 1726
Fnu4HI	GCNGC	9 cut(s)	189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
FokI	GGATG	8 cut(s)	146, 152, 197, 512, 542, 1703, 2202, 2549
FriOI	GRGCYC	3 cut(s)	1285, 1411, 2195
Fsp4HI	GCNGC	9 cut(s)	189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
FspBI	CTAG	8 cut(s)	216, 639, 926, 1509, 2022, 2181, 2387, 2534
GlaI	GCGC	3 cut(s)	1044, 1062, 1064
GluI	GCNGC	9 cut(s)	189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
GsuI	CTGGAG	2 cut(s)	1433, 2514
HaeIII	GGCC	7 cut(s)	616, 634, 894, 1101, 1283, 2107, 2411
HapII	CCGG	3 cut(s)	643, 876, 2342
HgaI	GACGC	1 cut(s)	562
HhaI	GCGC	3 cut(s)	1045, 1063, 1065
Hin6I	GCGC	3 cut(s)	1043, 1061, 1063
HinP1I	GCGC	3 cut(s)	1043, 1061, 1063
HindIII	AAGCTT	2 cut(s)	2067, 2468
HinfI	GANTC	9 cut(s)	62, 68, 176, 535, 932, 938, 1196, 1363, 2537
HpaII	CCGG	3 cut(s)	643, 876, 2342
HphI	GGTGA	5 cut(s)	587, 1479, 1738, 1744, 2096
Hpy166II	GTNNAC	6 cut(s)	61, 458, 1379, 1518, 1727, 2570
Hpy8I	GTNNAC	6 cut(s)	61, 458, 1379, 1518, 1727, 2570
HpyAV	CCTTC	7 cut(s)	455, 645, 1091, 1146, 1241, 1778, 1910
HpyCH4III	ACNGT	9 cut(s)	58, 626, 861, 1070, 1741, 1750, 1870, 1970, 2230
HpyCH4IV	ACGT	1 cut(s)	46
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 221, 1870, 1955, 2190
HpyF3I	CTNAG	7 cut(s)	390, 489, 936, 1536, 1669, 1840, 2028
HpySE526I	ACGT	1 cut(s)	46
HspAI	GCGC	3 cut(s)	1043, 1061, 1063
KpnI	GGTACC	1 cut(s)	860
Kzo9I	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
LmnI	GCTCC	3 cut(s)	570, 871, 1414
Lsp1109I	GCAGC	9 cut(s)	175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
MabI	ACCWGGT	1 cut(s)	852
MaeI	CTAG	8 cut(s)	216, 639, 926, 1509, 2022, 2181, 2387, 2534
MaeII	ACGT	1 cut(s)	46
MaeIII	GTNAC	7 cut(s)	47, 257, 280, 502, 1750, 2371, 2380
MalI	GATC	7 cut(s)	784, 987, 1342, 1838, 1845, 2404, 2551
MboI	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
MfeI	CAATTG	1 cut(s)	1182
MflI	RGATCY	3 cut(s)	1340, 1836, 1843
MhlI	GDGCHC	3 cut(s)	1285, 1411, 2195
MlsI	TGGCCA	1 cut(s)	894
MluI	ACGCGT	1 cut(s)	352
MluNI	TGGCCA	1 cut(s)	894
MlyI	GAGTC	3 cut(s)	56, 941, 947
MmeI	TCCRAC	2 cut(s)	1801, 2131
Mox20I	TGGCCA	1 cut(s)	894
Mph1103I	ATGCAT	1 cut(s)	1423
MscI	TGGCCA	1 cut(s)	894
MseI	TTAA	9 cut(s)	621, 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
Msp20I	TGGCCA	1 cut(s)	894
MspA1I	CMGCKG	3 cut(s)	488, 1692, 2291
MspI	CCGG	3 cut(s)	643, 876, 2342
MspR9I	CCNGG	4 cut(s)	714, 854, 2342, 2377
MunI	CAATTG	1 cut(s)	1182
Mva1269I	GAATGC	2 cut(s)	151, 1810
MvaI	CCWGG	3 cut(s)	714, 854, 2377
MvnI	CGCG	3 cut(s)	354, 454, 1063
MwoI	GCNNNNNNNGC	5 cut(s)	194, 221, 1870, 1955, 2190
NciI	CCSGG	1 cut(s)	2342
NdeI	CATATG	1 cut(s)	157
NdeII	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
NheI	GCTAGC	1 cut(s)	1508
NlaIV	GGNNCC	4 cut(s)	858, 1283, 1284, 2094
NmuCI	GTSAC	4 cut(s)	47, 280, 502, 1750
NsiI	ATGCAT	1 cut(s)	1423
NspI	RCATGY	2 cut(s)	300, 1421
NspV	TTCGAA	1 cut(s)	174
PaeI	GCATGC	1 cut(s)	1421
PaqCI	CACCTGC	1 cut(s)	458
PauI	GCGCGC	1 cut(s)	1061
PceI	AGGCCT	1 cut(s)	634
PctI	GAATGC	2 cut(s)	151, 1810
PfeI	GAWTC	6 cut(s)	68, 176, 535, 1196, 1363, 2537
PflMI	CCANNNNNTGG	4 cut(s)	418, 560, 1815, 2259
PfoI	TCCNGGA	1 cut(s)	712
PinAI	ACCGGT	1 cut(s)	875
PkrI	GCNGC	9 cut(s)	190, 1163, 1251, 1315, 1507, 1688, 1691, 1948, 2322
PleI	GAGTC	3 cut(s)	56, 940, 946
PpsI	GAGTC	3 cut(s)	56, 940, 946
Psp6I	CCWGG	3 cut(s)	712, 852, 2375
PspEI	GGTNACC	1 cut(s)	2371
PspGI	CCWGG	3 cut(s)	712, 852, 2375
PspN4I	GGNNCC	4 cut(s)	858, 1283, 1284, 2094
PspOMI	GGGCCC	1 cut(s)	1281
PspPI	GGNCC	7 cut(s)	272, 403, 614, 789, 1281, 1282, 2092
PstI	CTGCAG	2 cut(s)	1254, 1691
PstNI	CAGNNNCTG	1 cut(s)	1928
PsuI	RGATCY	3 cut(s)	1340, 1836, 1843
PteI	GCGCGC	1 cut(s)	1061
PvuII	CAGCTG	3 cut(s)	488, 1692, 2291
RsaI	GTAC	7 cut(s)	628, 851, 858, 1380, 1473, 2016, 2361
RsaNI	GTAC	7 cut(s)	627, 850, 857, 1379, 1472, 2015, 2360
SaqAI	TTAA	9 cut(s)	621, 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
SatI	GCNGC	9 cut(s)	189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
Sau3AI	GATC	7 cut(s)	782, 985, 1340, 1836, 1843, 2402, 2549
Sau96I	GGNCC	7 cut(s)	272, 403, 614, 789, 1281, 1282, 2092
ScaI	AGTACT	1 cut(s)	1473
SchI	GAGTC	3 cut(s)	56, 941, 947
ScrFI	CCNGG	4 cut(s)	714, 854, 2342, 2377
SduI	GDGCHC	3 cut(s)	1285, 1411, 2195
SexAI	ACCWGGT	1 cut(s)	852
SfcI	CTRYAG	4 cut(s)	1250, 1687, 1723, 1929
SfuI	TTCGAA	1 cut(s)	174
SinI	GGWCC	4 cut(s)	272, 403, 789, 2092
SmlI	CTYRAG	2 cut(s)	9, 2465
SmoI	CTYRAG	2 cut(s)	9, 2465
SphI	GCATGC	1 cut(s)	1421
SseBI	AGGCCT	1 cut(s)	634
SsiI	CCGC	9 cut(s)	32, 452, 600, 751, 792, 1847, 1873, 1910, 2189
SspI	AATATT	1 cut(s)	822
SspMI	CTAG	8 cut(s)	216, 639, 926, 1509, 2022, 2181, 2387, 2534
StuI	AGGCCT	1 cut(s)	634
StyD4I	CCNGG	4 cut(s)	712, 852, 2340, 2375
StyI	CCWWGG	2 cut(s)	192, 2108
TaaI	ACNGT	9 cut(s)	58, 626, 861, 1070, 1741, 1750, 1870, 1970, 2230
TaiI	ACGT	1 cut(s)	49
TaqI	TCGA	9 cut(s)	174, 416, 448, 785, 838, 988, 1270, 1656, 2405
TatI	WGTACW	3 cut(s)	626, 1471, 2359
TfiI	GAWTC	6 cut(s)	68, 176, 535, 1196, 1363, 2537
Tru1I	TTAA	9 cut(s)	621, 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
Tru9I	TTAA	9 cut(s)	621, 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
TscAI	CASTG	5 cut(s)	1073, 1263, 1283, 1873, 1975
TseFI	GTSAC	4 cut(s)	47, 280, 502, 1750
TseI	GCWGC	9 cut(s)	188, 1161, 1249, 1313, 1505, 1686, 1689, 1946, 2320
Tsp45I	GTSAC	4 cut(s)	47, 280, 502, 1750
TspDTI	ATGAA	9 cut(s)	564, 759, 995, 1416, 1644, 1691, 1845, 2075, 2254
TspGWI	ACGGA	1 cut(s)	2555
TspRI	CASTG	5 cut(s)	1073, 1263, 1283, 1873, 1975
Van91I	CCANNNNNTGG	4 cut(s)	418, 560, 1815, 2259
VpaK11BI	GGWCC	4 cut(s)	272, 403, 789, 2092
XapI	RAATTY	3 cut(s)	290, 607, 2278
XbaI	TCTAGA	1 cut(s)	925
XceI	RCATGY	2 cut(s)	300, 1421
XcmI	CCANNNNNNNNNTGG	2 cut(s)	282, 2106
XmiI	GTMKAC	4 cut(s)	60, 457, 1517, 1726
XspI	CTAG	8 cut(s)	216, 639, 926, 1509, 2022, 2181, 2387, 2534
ZrmI	AGTACT	1 cut(s)	1473
Zsp2I	ATGCAT	1 cut(s)	1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.