RchiOBHm_Chr1g0331031

Protein FAR1-RELATED SEQUENCE 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003477
Physical Location & Seq
Reverse (-)
20835484 .. 20843433
7950 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56009

Sequence Viewer

Length: 2580 bp
ATGGACACTGAAGTTTTGGCAGATGTTGAAGCGGAAGACAGGGAACGTCACGGGACGGTAGACTCTGAATCTGATAAAGGTGTAAAGCAAAATGTAAATGATAGTTTTGCAGGGAGAGAAATAATTGTACAGGATGAGGATGGGAATGCTAAACCATATGTGGGAATGGAGTTCGAATCAGAGGATGCTGCCAAGGCTCTCTATGAGGCGTATGCTAGGTGTGCTGGTTTTAGCACCCATGTTGGTCAGTTTAGTCGTAACAAGCCTGATGGACCAATAGTGACATGGGAATTTGCATGTTCACGAGAGGTGTTCAAAAGAAAGAATGTTGAAAGTTGCAATGCTATGCTACGCGTAGAGAGAAAAGATGCAAACACTTGGGTTGCCACTAAGTTTATTGAGGACCACAACCATTCGATGGAAAGTCCAAATAAAGTCCATTACCTTCGACCGCGTAGACACTTTGCAGGTGCTACAAAGAATACAGCTGAGACTTTGGATGTCACTTCTGATGCTTATGTCTCTATGGATGGGAATCCTGTCCCTTATGAACCAAATCGTGGAGGTAGGAGCGTCTCTCCTGTTGAACAAAATCGCCCTGCAAGGAATTTTGGGCCTACTAACTATACAAGGCCTTCTAGCCGGAAGAGAACGCTTGGAAGAGACGCTCAAAATCTTCTAAACTATTTCAAGAAGATGCAGGCTGAAAATCCTGGATTTTATTATGCTATACAGCTTGATGATGACAACCGCATGACTAATGTTTTCTGGACTGATGCGAGATCGAGGACCGCTTACAACTACTTTGGAGATGCTGTAATATTTGATACAATGTATCGACCAAATCAGTACCAGGTGCCGTTTGCTCCTTTTACCGGTGTAAATCATCATGGCCAGATGGTATTGTTTGGCTGTGCATTACTTCTAGATGAGTCTGAGTCTTCCTTTACTTGGCTGTTTAAGACATGGCTTTCTGCAATGAATGATCGACCTCCTATTTCTATAACTACCGACCAAGATAGAGCAATACAAGTGGCAGTAGCGCAGGTATTCCCAGATGCGCGCCACTGTATATGCAAGTGGCACATTTTAAGAGAAGGCCAAGAAAGATTGGCTCATATATATCTTTCTAATCCTTCCTTTTATGGAGAGCTGTATAGCTGCATCAACTTTTCAGAGACAATTGAGGATTTTGAATCGTCATGGGTGTCCATTCTTGATAGATATGACCTTCGGAGAAATGATTGGCTGCAGGCAGTGTATAATGCTCGAAAGCAGTGGGCCCCAGTTTATTTTCGTGGGACTTTCTTTGCTGCAATTTCCTCAAATCAAGGAGTTAGATCTTTCTTTGATGGCTATGTGAATCAACAGACTAGTGTACCTCTGTTCTTTAAGCAGTATGAAAGGGCTCTGGAGCATGCATTAGAAAAAGAAATAGAAGCAGATTATGATACAATTTGCACCACACCAGTACTGAAGACACCATCACCAATGGAACAACAGGCAGCTAGCTTGTATACAAAAAAAGTATTTTCCAAGTTTCAGGAGGAATTAGTTGAAACTTTTGTCTATACTGCAAATAAGATAGATGGAGATGGGCTTGCCAGTAAATACAGGGTTGCGAAGTATGAACATGATGACAAGGCTTATATAGTCGAACTAAATGTCTCAGAGATGAAAGCAAGCTGCAGCTGTCAAATGTTTGAATATGCTGGCATCCTCTGTAGACATATTTTGACTGTCTTCACGGTCACCAATGTTCTTACCCTTCCATCACATTACATATTGAAGCGATGGACAAGGAATGCCAAATCTTGGGTTGGAGTAGATGAACAGATCTCAGATCCGCAAGGTGTTGAGATACTCACTGTGCGGTTCAACAATTTATGTCAGGAAGCCATTAAATATGCGGAAGAAGGGGCAGTTGCTGTAGAGACTTACAATGCAGCAATGATTGCTCTACGAGACAGTGGGAAAAAGATTGCTGATTTGAAGAAAAATGTTGCTAAAGTTGCACCTCCTAGCTCTCAGGGTAGTGGAAGTATTCAGGAAGAAAATATGAAAAAAGCTTCTTTGCCATTTGGTGAATTGGTCCCCCCATTGTGGCCTTGGCAAGAAGCATTGCCACATCGCTTTAATCTTAATGATGTCGGAGTTCCTGTTTCTGATATAAATCAGCCTAGCATGGCGGGCTCTATTCAACCCGATGGTGGGCATCCTGATAATACGGTGGTTTATACTTGCTTCAAGTCCATGACATGGGTCATAGAAAATAAGAATTCAACATCAGCTGGAAAAGTTGCTGTTATTAACTTGAAGCTGCAAGATTATCGCAAGAACCCGGCAGGAGAAACAGATGTACAATTTAGGGTAACCAGGGTTACACTAGAGCCTATGTTAAGATCGATGGCCTACATTGGTCAGCAACTTTCTGCACCAGCCAACAGAGTTGCTGTTATCAATCTCAAGCTTCAAGATACAAATACAACATCTGGAGAAACAGAAGTCAAGTTTCAAGTGTCCAGAGATACACTAGATTCCATGTTGAGATCAATGGCTTACATCCGTGAACAACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COMM_domain FAR1 MULE SWIM

Protein Analysis

859

Amino Acids

97.47

Weight (kDa)

5.83

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 67 - 140 1.1e-11 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 233 - 355 7e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 273 - 364 1.5e-28 MULE transposase domain
SWIM PF04434 554 - 584 8.7e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 2 cut(s) 458, 1036
AccB1I GGYRCC 1 cut(s) 856
AccB7I CCANNNNNTGG 4 cut(s) 418, 560, 1815, 2259
AccI GTMKAC 4 cut(s) 60, 457, 1517, 1726
AccII CGCG 3 cut(s) 354, 454, 1063
AciI CCGC 8 cut(s) 32, 452, 751, 792, 1847, 1873, 1910, 2189
AclWI GGATC 1 cut(s) 1838
AcoI YGGCCR 1 cut(s) 892
AcsI RAATTY 3 cut(s) 290, 607, 2278
AcuI CTGAAG 2 cut(s) 30, 1496
AfaI GTAC 5 cut(s) 129, 851, 1380, 1473, 2361
AflIII ACRYGT 1 cut(s) 352
AgeI ACCGGT 1 cut(s) 875
AhlI ACTAGT 1 cut(s) 1373
AjnI CCWGG 3 cut(s) 712, 852, 2375
Alw26I GTCTC 8 cut(s) 485, 526, 580, 657, 1172, 1672, 1928, 1959
AlwI GGATC 1 cut(s) 1838
AlwNI CAGNNNCTG 1 cut(s) 1928
AoxI GGCC 7 cut(s) 614, 632, 892, 1099, 1281, 2105, 2409
ApaI GGGCCC 1 cut(s) 1285
ApeKI GCWGC 9 cut(s) 188, 1161, 1249, 1313, 1505, 1686, 1689, 1946, 2320
ApoI RAATTY 3 cut(s) 290, 607, 2278
ArsI GACNNNNNNTTYG 2 cut(s) 1650, 1682
AsiGI ACCGGT 1 cut(s) 875
AspLEI GCGC 3 cut(s) 1045, 1063, 1065
AspS9I GGNCC 7 cut(s) 272, 403, 614, 789, 1281, 1282, 2092
AsuC2I CCSGG 1 cut(s) 2342
AsuHPI GGTGA 3 cut(s) 1479, 1744, 2096
AsuII TTCGAA 1 cut(s) 174
AsuNHI GCTAGC 1 cut(s) 1508
AvaII GGWCC 4 cut(s) 272, 403, 789, 2092
BaeGI GKGCMC 1 cut(s) 1285
BaeI ACNNNNGTAYC 2 cut(s) 1362, 1395
BalI TGGCCA 1 cut(s) 894
BanI GGYRCC 1 cut(s) 856
BanII GRGCYC 3 cut(s) 1285, 1411, 2195
BauI CACGAG 1 cut(s) 303
BbsI GAAGAC 4 cut(s) 42, 933, 1484, 1735
BbvI GCAGC 9 cut(s) 175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BceAI ACGGC 1 cut(s) 844
BcgI CGANNNNNNTGC 2 cut(s) 2312, 2346
BciT130I CCWGG 3 cut(s) 714, 854, 2377
BcnI CCSGG 1 cut(s) 2342
BcoDI GTCTC 8 cut(s) 485, 526, 580, 657, 1172, 1672, 1928, 1959
BcuI ACTAGT 1 cut(s) 1373
BfaI CTAG 9 cut(s) 216, 639, 926, 1374, 1509, 2022, 2181, 2387, 2534
BfmI CTRYAG 4 cut(s) 1250, 1687, 1723, 1929
BfuAI ACCTGC 2 cut(s) 458, 1036
BglII AGATCT 2 cut(s) 1340, 1836
BisI GCNGC 9 cut(s) 189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
BlsI GCNGC 9 cut(s) 190, 1163, 1251, 1315, 1507, 1688, 1691, 1948, 2322
BmcAI AGTACT 1 cut(s) 1473
Bme1390I CCNGG 4 cut(s) 714, 854, 2342, 2377
Bme18I GGWCC 4 cut(s) 272, 403, 789, 2092
BmgT120I GGNCC 7 cut(s) 272, 403, 614, 789, 1281, 1282, 2092
BmiI GGNNCC 4 cut(s) 858, 1283, 1284, 2094
BmrFI CCNGG 4 cut(s) 714, 854, 2342, 2377
BmrI ACTGGG 1 cut(s) 1280
BmtI GCTAGC 1 cut(s) 1512
BmuI ACTGGG 1 cut(s) 1280
BoxI GACNNNNGTC 1 cut(s) 2261
BpiI GAAGAC 4 cut(s) 42, 933, 1484, 1735
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 2 cut(s) 1433, 2514
Bpu14I TTCGAA 1 cut(s) 174
BpuEI CTTGAG 1 cut(s) 2450
BpuMI CCSGG 1 cut(s) 2342
Bsa29I ATCGAT 1 cut(s) 2405
BsaBI GATNNNNATC 2 cut(s) 534, 2172
BsaJI CCNNGG 3 cut(s) 192, 2108, 2376
BsaWI WCCGGW 1 cut(s) 875
BsaXI ACNNNNNCTCC 4 cut(s) 801, 831, 2145, 2175
Bse118I RCCGGY 1 cut(s) 875
Bse1I ACTGG 3 cut(s) 1286, 1469, 1605
Bse3DI GCAATG 4 cut(s) 346, 984, 1956, 2120
Bse8I GATNNNNATC 2 cut(s) 534, 2172
BseBI CCWGG 3 cut(s) 714, 854, 2377
BseCI ATCGAT 1 cut(s) 2405
BseDI CCNNGG 3 cut(s) 192, 2108, 2376
BseGI GGATG 8 cut(s) 139, 145, 190, 505, 535, 1716, 2215, 2562
BseJI GATNNNNATC 2 cut(s) 534, 2172
BseMI GCAATG 4 cut(s) 346, 984, 1956, 2120
BseMII CTCAG 5 cut(s) 480, 927, 1683, 1854, 2042
BseNI ACTGG 3 cut(s) 1286, 1469, 1605
BsePI GCGCGC 1 cut(s) 1061
BseSI GKGCMC 1 cut(s) 1285
BseXI GCAGC 9 cut(s) 175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BsgI GTGCAG 1 cut(s) 2418
Bsh1236I CGCG 3 cut(s) 354, 454, 1063
Bsh1285I CGRYCG 1 cut(s) 452
BshFI GGCC 7 cut(s) 616, 634, 894, 1101, 1283, 2107, 2411
BshNI GGYRCC 1 cut(s) 856
BshTI ACCGGT 1 cut(s) 875
BshVI ATCGAT 1 cut(s) 2405
BsiEI CGRYCG 1 cut(s) 452
BsiSI CCGG 3 cut(s) 643, 876, 2342
BslFI GGGAC 4 cut(s) 67, 527, 1315, 2078
BsmAI GTCTC 8 cut(s) 485, 526, 580, 657, 1172, 1672, 1928, 1959
BsmBI CGTCTC 2 cut(s) 580, 657
BsmFI GGGAC 4 cut(s) 67, 527, 1315, 2078
BsmI GAATGC 2 cut(s) 151, 1810
BsnI GGCC 7 cut(s) 616, 634, 894, 1101, 1283, 2107, 2411
Bsp119I TTCGAA 1 cut(s) 174
Bsp120I GGGCCC 1 cut(s) 1281
Bsp1286I GDGCHC 3 cut(s) 1285, 1411, 2195
Bsp1407I TGTACA 2 cut(s) 127, 2359
Bsp143I GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
BspACI CCGC 8 cut(s) 32, 452, 751, 792, 1847, 1873, 1910, 2189
BspANI GGCC 7 cut(s) 616, 634, 894, 1101, 1283, 2107, 2411
BspCNI CTCAG 5 cut(s) 481, 928, 1682, 1853, 2041
BspDI ATCGAT 1 cut(s) 2405
BspFNI CGCG 3 cut(s) 354, 454, 1063
BspLI GGNNCC 4 cut(s) 858, 1283, 1284, 2094
BspMAI CTGCAG 2 cut(s) 1254, 1691
BspMI ACCTGC 2 cut(s) 458, 1036
BspOI GCTAGC 1 cut(s) 1512
BspPI GGATC 1 cut(s) 1838
BspT104I TTCGAA 1 cut(s) 174
BspT107I GGYRCC 1 cut(s) 856
BsrDI GCAATG 4 cut(s) 346, 984, 1956, 2120
BsrFI RCCGGY 1 cut(s) 875
BsrGI TGTACA 2 cut(s) 127, 2359
BsrI ACTGG 3 cut(s) 1286, 1469, 1605
BssAI RCCGGY 1 cut(s) 875
BssECI CCNNGG 3 cut(s) 192, 2108, 2376
BssHII GCGCGC 1 cut(s) 1061
BssMI GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
BssNAI GTATAC 1 cut(s) 1518
BssSI CACGAG 1 cut(s) 303
BssT1I CCWWGG 2 cut(s) 192, 2108
Bst1107I GTATAC 1 cut(s) 1518
Bst2BI CACGAG 1 cut(s) 303
Bst2UI CCWGG 3 cut(s) 714, 854, 2377
Bst4CI ACNGT 7 cut(s) 58, 1070, 1741, 1750, 1870, 1970, 2230
Bst6I CTCTTC 2 cut(s) 641, 655
BstAPI GCANNNNNTGC 1 cut(s) 1955
BstAUI TGTACA 2 cut(s) 127, 2359
BstBI TTCGAA 1 cut(s) 174
BstC8I GCNNGC 9 cut(s) 702, 1063, 1254, 1419, 1510, 1602, 1684, 1714, 2191
BstDEI CTNAG 6 cut(s) 390, 489, 936, 1669, 1840, 2028
BstEII GGTNACC 2 cut(s) 1750, 2371
BstF5I GGATG 8 cut(s) 139, 145, 190, 505, 535, 1716, 2215, 2562
BstFNI CGCG 3 cut(s) 354, 454, 1063
BstHHI GCGC 3 cut(s) 1045, 1063, 1065
BstKTI GATC 7 cut(s) 785, 988, 1343, 1839, 1846, 2405, 2552
BstMAI GTCTC 8 cut(s) 485, 526, 580, 657, 1172, 1672, 1928, 1959
BstMBI GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
BstMCI CGRYCG 1 cut(s) 452
BstMWI GCNNNNNNNGC 5 cut(s) 194, 221, 1955, 2012, 2190
BstNI CCWGG 3 cut(s) 714, 854, 2377
BstNSI RCATGY 2 cut(s) 300, 1421
BstPAI GACNNNNGTC 1 cut(s) 2261
BstPI GGTNACC 2 cut(s) 1750, 2371
BstSCI CCNGG 4 cut(s) 712, 852, 2340, 2375
BstSFI CTRYAG 4 cut(s) 1250, 1687, 1723, 1929
BstSLI GKGCMC 1 cut(s) 1285
BstUI CGCG 3 cut(s) 354, 454, 1063
BstV1I GCAGC 9 cut(s) 175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
BstV2I GAAGAC 4 cut(s) 42, 933, 1484, 1735
BstX2I RGATCY 3 cut(s) 1340, 1836, 1843
BstYI RGATCY 3 cut(s) 1340, 1836, 1843
BstZ17I GTATAC 1 cut(s) 1518
Bsu15I ATCGAT 1 cut(s) 2405
BsuRI GGCC 7 cut(s) 616, 634, 894, 1101, 1283, 2107, 2411
BsuTUI ATCGAT 1 cut(s) 2405
BtgZI GCGATG 2 cut(s) 1807, 2114
BtsCI GGATG 8 cut(s) 139, 145, 190, 505, 535, 1716, 2215, 2562
BtsI GCAGTG 2 cut(s) 1263, 1283
BtsIMutI CAGTG 6 cut(s) 6, 1066, 1263, 1283, 1866, 1975
BveI ACCTGC 2 cut(s) 458, 1036
Cac8I GCNNGC 9 cut(s) 702, 1063, 1254, 1419, 1510, 1602, 1684, 1714, 2191
CaiI CAGNNNCTG 1 cut(s) 1928
CfoI GCGC 3 cut(s) 1045, 1063, 1065
Cfr10I RCCGGY 1 cut(s) 875
Cfr13I GGNCC 7 cut(s) 272, 403, 614, 789, 1281, 1282, 2092
ClaI ATCGAT 1 cut(s) 2405
CseI GACGC 2 cut(s) 562, 674
CsiI ACCWGGT 1 cut(s) 852
Csp6I GTAC 5 cut(s) 128, 850, 1379, 1472, 2360
CspAI ACCGGT 1 cut(s) 875
CspCI CAANNNNNGTGG 2 cut(s) 1014, 1049
CviQI GTAC 5 cut(s) 128, 850, 1379, 1472, 2360
DdeI CTNAG 6 cut(s) 390, 489, 936, 1669, 1840, 2028
DpnI GATC 7 cut(s) 784, 987, 1342, 1838, 1845, 2404, 2551
DpnII GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
EaeI YGGCCR 1 cut(s) 892
Eam1104I CTCTTC 2 cut(s) 641, 655
EarI CTCTTC 2 cut(s) 641, 655
Eco130I CCWWGG 2 cut(s) 192, 2108
Eco147I AGGCCT 1 cut(s) 634
Eco24I GRGCYC 3 cut(s) 1285, 1411, 2195
Eco47I GGWCC 4 cut(s) 272, 403, 789, 2092
Eco57I CTGAAG 2 cut(s) 30, 1496
Eco91I GGTNACC 2 cut(s) 1750, 2371
EcoO109I RGGNCCY 1 cut(s) 1282
EcoO65I GGTNACC 2 cut(s) 1750, 2371
EcoRI GAATTC 1 cut(s) 2278
EcoRII CCWGG 3 cut(s) 712, 852, 2375
EcoT14I CCWWGG 2 cut(s) 192, 2108
EcoT22I ATGCAT 1 cut(s) 1423
EcoT38I GRGCYC 3 cut(s) 1285, 1411, 2195
ErhI CCWWGG 2 cut(s) 192, 2108
Esp3I CGTCTC 2 cut(s) 580, 657
FaqI GGGAC 4 cut(s) 67, 527, 1315, 2078
FauI CCCGC 1 cut(s) 2182
FauNDI CATATG 1 cut(s) 157
FblI GTMKAC 4 cut(s) 60, 457, 1517, 1726
Fnu4HI GCNGC 9 cut(s) 189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
FokI GGATG 8 cut(s) 146, 152, 197, 512, 542, 1703, 2202, 2549
FriOI GRGCYC 3 cut(s) 1285, 1411, 2195
Fsp4HI GCNGC 9 cut(s) 189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
FspBI CTAG 9 cut(s) 216, 639, 926, 1374, 1509, 2022, 2181, 2387, 2534
GlaI GCGC 3 cut(s) 1044, 1062, 1064
GluI GCNGC 9 cut(s) 189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
GsuI CTGGAG 2 cut(s) 1433, 2514
HaeIII GGCC 7 cut(s) 616, 634, 894, 1101, 1283, 2107, 2411
HapII CCGG 3 cut(s) 643, 876, 2342
HgaI GACGC 2 cut(s) 562, 674
HhaI GCGC 3 cut(s) 1045, 1063, 1065
Hin6I GCGC 3 cut(s) 1043, 1061, 1063
HinP1I GCGC 3 cut(s) 1043, 1061, 1063
HindIII AAGCTT 2 cut(s) 2067, 2468
HinfI GANTC 9 cut(s) 62, 68, 176, 535, 932, 938, 1196, 1363, 2537
HpaII CCGG 3 cut(s) 643, 876, 2342
HphI GGTGA 3 cut(s) 1479, 1744, 2096
Hpy166II GTNNAC 7 cut(s) 61, 302, 458, 1379, 1518, 1727, 2570
Hpy8I GTNNAC 7 cut(s) 61, 302, 458, 1379, 1518, 1727, 2570
HpyAV CCTTC 7 cut(s) 455, 645, 1091, 1146, 1241, 1778, 1910
HpyCH4III ACNGT 7 cut(s) 58, 1070, 1741, 1750, 1870, 1970, 2230
HpyCH4IV ACGT 1 cut(s) 46
HpyF10VI GCNNNNNNNGC 5 cut(s) 194, 221, 1955, 2012, 2190
HpyF3I CTNAG 6 cut(s) 390, 489, 936, 1669, 1840, 2028
HpySE526I ACGT 1 cut(s) 46
HspAI GCGC 3 cut(s) 1043, 1061, 1063
Kzo9I GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
LmnI GCTCC 3 cut(s) 570, 871, 1414
Lsp1109I GCAGC 9 cut(s) 175, 1148, 1236, 1300, 1517, 1673, 1701, 1958, 2307
MabI ACCWGGT 1 cut(s) 852
MaeI CTAG 9 cut(s) 216, 639, 926, 1374, 1509, 2022, 2181, 2387, 2534
MaeII ACGT 1 cut(s) 46
MaeIII GTNAC 7 cut(s) 47, 257, 280, 502, 1750, 2371, 2380
MalI GATC 7 cut(s) 784, 987, 1342, 1838, 1845, 2404, 2551
MboI GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 3 cut(s) 1340, 1836, 1843
MhlI GDGCHC 3 cut(s) 1285, 1411, 2195
MlsI TGGCCA 1 cut(s) 894
MluI ACGCGT 1 cut(s) 352
MluNI TGGCCA 1 cut(s) 894
MlyI GAGTC 3 cut(s) 56, 941, 947
MmeI TCCRAC 2 cut(s) 1801, 2131
Mox20I TGGCCA 1 cut(s) 894
Mph1103I ATGCAT 1 cut(s) 1423
MscI TGGCCA 1 cut(s) 894
MseI TTAA 8 cut(s) 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
Msp20I TGGCCA 1 cut(s) 894
MspA1I CMGCKG 3 cut(s) 488, 1692, 2291
MspI CCGG 3 cut(s) 643, 876, 2342
MspR9I CCNGG 4 cut(s) 714, 854, 2342, 2377
MunI CAATTG 1 cut(s) 1182
Mva1269I GAATGC 2 cut(s) 151, 1810
MvaI CCWGG 3 cut(s) 714, 854, 2377
MvnI CGCG 3 cut(s) 354, 454, 1063
MwoI GCNNNNNNNGC 5 cut(s) 194, 221, 1955, 2012, 2190
NciI CCSGG 1 cut(s) 2342
NdeI CATATG 1 cut(s) 157
NdeII GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
NheI GCTAGC 1 cut(s) 1508
NlaIV GGNNCC 4 cut(s) 858, 1283, 1284, 2094
NmuCI GTSAC 4 cut(s) 47, 280, 502, 1750
NsiI ATGCAT 1 cut(s) 1423
NspI RCATGY 2 cut(s) 300, 1421
NspV TTCGAA 1 cut(s) 174
PaeI GCATGC 1 cut(s) 1421
PaqCI CACCTGC 1 cut(s) 458
PauI GCGCGC 1 cut(s) 1061
PceI AGGCCT 1 cut(s) 634
PctI GAATGC 2 cut(s) 151, 1810
PfeI GAWTC 6 cut(s) 68, 176, 535, 1196, 1363, 2537
PflMI CCANNNNNTGG 4 cut(s) 418, 560, 1815, 2259
PfoI TCCNGGA 1 cut(s) 712
PinAI ACCGGT 1 cut(s) 875
PkrI GCNGC 9 cut(s) 190, 1163, 1251, 1315, 1507, 1688, 1691, 1948, 2322
PleI GAGTC 3 cut(s) 56, 940, 946
PpsI GAGTC 3 cut(s) 56, 940, 946
PshAI GACNNNNGTC 1 cut(s) 2261
Psp6I CCWGG 3 cut(s) 712, 852, 2375
PspEI GGTNACC 2 cut(s) 1750, 2371
PspGI CCWGG 3 cut(s) 712, 852, 2375
PspN4I GGNNCC 4 cut(s) 858, 1283, 1284, 2094
PspOMI GGGCCC 1 cut(s) 1281
PspPI GGNCC 7 cut(s) 272, 403, 614, 789, 1281, 1282, 2092
PstI CTGCAG 2 cut(s) 1254, 1691
PstNI CAGNNNCTG 1 cut(s) 1928
PsuI RGATCY 3 cut(s) 1340, 1836, 1843
PteI GCGCGC 1 cut(s) 1061
PvuII CAGCTG 3 cut(s) 488, 1692, 2291
RsaI GTAC 5 cut(s) 129, 851, 1380, 1473, 2361
RsaNI GTAC 5 cut(s) 128, 850, 1379, 1472, 2360
SaqAI TTAA 8 cut(s) 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
SatI GCNGC 9 cut(s) 189, 1162, 1250, 1314, 1506, 1687, 1690, 1947, 2321
Sau3AI GATC 7 cut(s) 782, 985, 1340, 1836, 1843, 2402, 2549
Sau96I GGNCC 7 cut(s) 272, 403, 614, 789, 1281, 1282, 2092
ScaI AGTACT 1 cut(s) 1473
SchI GAGTC 3 cut(s) 56, 941, 947
ScrFI CCNGG 4 cut(s) 714, 854, 2342, 2377
SduI GDGCHC 3 cut(s) 1285, 1411, 2195
SexAI ACCWGGT 1 cut(s) 852
SfcI CTRYAG 4 cut(s) 1250, 1687, 1723, 1929
SfuI TTCGAA 1 cut(s) 174
SinI GGWCC 4 cut(s) 272, 403, 789, 2092
SmlI CTYRAG 1 cut(s) 2465
SmoI CTYRAG 1 cut(s) 2465
SpeI ACTAGT 1 cut(s) 1373
SphI GCATGC 1 cut(s) 1421
SseBI AGGCCT 1 cut(s) 634
SsiI CCGC 8 cut(s) 32, 452, 751, 792, 1847, 1873, 1910, 2189
SspI AATATT 1 cut(s) 822
SspMI CTAG 9 cut(s) 216, 639, 926, 1374, 1509, 2022, 2181, 2387, 2534
StuI AGGCCT 1 cut(s) 634
StyD4I CCNGG 4 cut(s) 712, 852, 2340, 2375
StyI CCWWGG 2 cut(s) 192, 2108
TaaI ACNGT 7 cut(s) 58, 1070, 1741, 1750, 1870, 1970, 2230
TaiI ACGT 1 cut(s) 49
TaqI TCGA 9 cut(s) 174, 416, 448, 785, 838, 988, 1270, 1656, 2405
TatI WGTACW 3 cut(s) 127, 1471, 2359
TfiI GAWTC 6 cut(s) 68, 176, 535, 1196, 1363, 2537
Tru1I TTAA 8 cut(s) 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
Tru9I TTAA 8 cut(s) 960, 1091, 1392, 1902, 2136, 2142, 2310, 2399
TscAI CASTG 6 cut(s) 13, 1073, 1263, 1283, 1873, 1975
TseFI GTSAC 4 cut(s) 47, 280, 502, 1750
TseI GCWGC 9 cut(s) 188, 1161, 1249, 1313, 1505, 1686, 1689, 1946, 2320
Tsp45I GTSAC 4 cut(s) 47, 280, 502, 1750
TspDTI ATGAA 7 cut(s) 564, 995, 1416, 1644, 1691, 1845, 2075
TspGWI ACGGA 1 cut(s) 2555
TspRI CASTG 6 cut(s) 13, 1073, 1263, 1283, 1873, 1975
Van91I CCANNNNNTGG 4 cut(s) 418, 560, 1815, 2259
VpaK11BI GGWCC 4 cut(s) 272, 403, 789, 2092
XapI RAATTY 3 cut(s) 290, 607, 2278
XbaI TCTAGA 1 cut(s) 925
XceI RCATGY 2 cut(s) 300, 1421
XcmI CCANNNNNNNNNTGG 2 cut(s) 282, 2106
XmiI GTMKAC 4 cut(s) 60, 457, 1517, 1726
XspI CTAG 9 cut(s) 216, 639, 926, 1374, 1509, 2022, 2181, 2387, 2534
ZrmI AGTACT 1 cut(s) 1473
Zsp2I ATGCAT 1 cut(s) 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.