Prupe.2G090000_v2.0.a1

Glucomannan 4-beta-mannosyltransferase 9-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
14251392 .. 14256012
4621 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G090000.1

Sequence Viewer

Length: 1554 bp
ATGGACACATTGCAAGTAGGGCAATTTGGGTTGGTTTTGCAGCAAGCCAAAGCCCCACTGATTGTGCCATTGCTGAAGTTTTTGGTGGTTGTGTGCTTGGGCATGTCTGTGATGCTTTTTGTGGAGAAGGTGTACATGGGCATAATAATAATATTTATTAAGCTGTTTAGAAGAAGGCCTGTGAAGCATTGGAAATGGGAGGCCATTAAGGATGATGTTGAGCTTGGGAACTCAGCTTACCCTATGGTTCTTGTGCAAATTCCTATGTACAATGAAAGAGAGGTTTATCAGCTTTCTATTGGAGCTGCATGTGGGCTTTCCTGGCCTTCTGATAGGATCATAATTCAAGTTCTTGATGATTCAACAGATCCAACCATTAAGGATTTGGTGGAGCTAGAATGCCAAAGATGGGCAAGCAAAGGAATAAACATAAAGTACGAGATCAGAGACAACAGAAATGGGTACAAAGCAGGGGCCCTCAAGGAAGGCATGAAGCACAGTTATGTCAAACAGTGTGACTATGTTGCCATCTTTGATGCTGACTTCCAACCTGAACCTGATTTTCTCTACCGCACCATTCCATTTCTGGTCCACAACTCTGATATTGCCCTTGTTCAAGCTCGCTGGAAATTTGTAAATTCGGATGAGTGTTTGATGACAAGAATGCAAGAGATGTCACTGGATTACCATTTCACGGTGGAGCAAGAAGTGGGGTCTGCAACTTATGCCTTCTTTGGTTTCAATGGCACGGCGGGTGTGTGGAGAATTGCAGCGCTCAATGAGGCTGGAGGATGGAAGGACCGCACAACAGTGGAGGATATGGATTTAGCAGTCCGAGCTAGTCTCAGAGGCTGGAAATTTGTATATCTTTCGGACCTTAAGGTGAAAAATGAATTGCCAAGTACGTTCAAAGCCTACCGTTATCAGCAGCATCGATGGTCTTGTGGCCCTGCTAATCTCTTTAGAAAGATGGTAATGGAGATTGTGAGAAACAAGAAGGTGTCCCCATTGAAGAAGTTTCATGTGATCTACAGCTTTTTCTTTGTTCGCAAAGTTGTAGCACATATCGTCACATTTGTCTTCTACTGTGTCATTTTACCAGCAACGGTTTTGGTTCCTGAAGTTCAAGTTCCCATCTGGGGTGCTGTTTACATTCCTTCTACCATTACTCTCCTCAATGCTGTTGGAACTCCTAGATCACTCCACCTATTGATTTTCTGGATCCTCTTTGAGAATGTCATGTCTCTGCACCGGACTAAGGCGACATTTATAGGTCTTTTTGAAGCAGGGAGAGTAAATGAATGGGTCGTCACTGAGAAACTGGGAGATGCTCTCAAGAAAAAATTAGGTGCAAAAGCTCCCAGGAAACCTCGATTAAGAATTGGAGAAAGACTACATGTGCTTGAGCTCATTGTTGGATTCTACCTCTTCTTCTGCGGCTGCTATGACCTTGCCTTTGGAAAGAACGGATACTTTATCTACCTATTCATCCAATCTGTTGCATTCTTCATTGCGGGGGTTGGTTATGTTGGCACCTTTGTCCCCAACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

518

Amino Acids

59.25

Weight (kDa)

9.19

Isoelectric Point (pI)

33.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1532
AciI CCGC 5 cut(s) 571, 752, 802, 1437, 1514
AclWI GGATC 4 cut(s) 344, 362, 1216, 1229
AcsI RAATTY 4 cut(s) 258, 629, 637, 857
AcuI CTGAAG 2 cut(s) 95, 1140
AfaI GTAC 5 cut(s) 134, 269, 437, 464, 904
AfeI AGCGCT 1 cut(s) 774
AfiI CCNNNNNNNGG 4 cut(s) 409, 694, 1139, 1258
AflII CTTAAG 1 cut(s) 878
AflIII ACRYGT 1 cut(s) 1396
AgsI TTSAA 8 cut(s) 347, 363, 617, 742, 910, 1012, 1127, 1283
AjnI CCWGG 2 cut(s) 320, 1361
AleI CACNNNNGTG 1 cut(s) 809
Alw21I GWGCWC 1 cut(s) 1410
Alw26I GTCTC 3 cut(s) 441, 848, 1248
AlwI GGATC 4 cut(s) 344, 362, 1216, 1229
AlwNI CAGNNNCTG 1 cut(s) 852
Aor51HI AGCGCT 1 cut(s) 774
AoxI GGCC 5 cut(s) 176, 201, 323, 474, 946
ApaI GGGCCC 1 cut(s) 478
ApeKI GCWGC 5 cut(s) 40, 305, 770, 928, 1440
ApoI RAATTY 4 cut(s) 258, 629, 637, 857
ArsI GACNNNNNNTTYG 2 cut(s) 1439, 1471
AspLEI GCGC 1 cut(s) 775
AspS9I GGNCC 6 cut(s) 474, 475, 589, 799, 874, 947
AsuHPI GGTGA 1 cut(s) 895
AvaII GGWCC 3 cut(s) 589, 799, 874
BaeGI GKGCMC 1 cut(s) 478
BamHI GGATCC 1 cut(s) 1221
BanI GGYRCC 1 cut(s) 1532
BanII GRGCYC 2 cut(s) 478, 1410
BbsI GAAGAC 1 cut(s) 1072
Bbv12I GWGCWC 1 cut(s) 1410
BbvI GCAGC 5 cut(s) 52, 292, 782, 940, 1427
BccI CCATC 6 cut(s) 402, 536, 786, 930, 964, 1142
BceAI ACGGC 1 cut(s) 765
BciT130I CCWGG 2 cut(s) 322, 1363
BciVI GTATCC 1 cut(s) 1463
BcoDI GTCTC 3 cut(s) 441, 848, 1248
BfaI CTAG 3 cut(s) 395, 840, 1194
BfmI CTRYAG 1 cut(s) 1030
BfoI RGCGCY 1 cut(s) 776
BfrI CTTAAG 1 cut(s) 878
BfuI GTATCC 1 cut(s) 1463
BisI GCNGC 6 cut(s) 41, 306, 771, 929, 1438, 1441
BlsI GCNGC 6 cut(s) 42, 307, 772, 930, 1439, 1442
Bme1390I CCNGG 2 cut(s) 322, 1363
Bme18I GGWCC 3 cut(s) 589, 799, 874
BmgT120I GGNCC 6 cut(s) 474, 475, 589, 799, 874, 947
BmiI GGNNCC 5 cut(s) 475, 476, 1116, 1223, 1534
BmrFI CCNGG 2 cut(s) 322, 1363
BmrI ACTGGG 1 cut(s) 1331
BmsI GCATC 4 cut(s) 102, 526, 940, 1318
BmuI ACTGGG 1 cut(s) 1331
BpiI GAAGAC 1 cut(s) 1072
BplI GAGNNNNNCTC 4 cut(s) 828, 860, 1317, 1349
BpmI CTGGAG 1 cut(s) 807
BpuEI CTTGAG 3 cut(s) 464, 1319, 1424
Bsa29I ATCGAT 1 cut(s) 934
BsaJI CCNNGG 1 cut(s) 1361
BsaWI WCCGGW 1 cut(s) 1251
BsaXI ACNNNNNCTCC 2 cut(s) 116, 146
Bsc4I CCNNNNNNNGG 4 cut(s) 409, 694, 1139, 1258
Bse1I ACTGG 2 cut(s) 684, 1326
Bse3DI GCAATG 3 cut(s) 8, 68, 1509
BseBI CCWGG 2 cut(s) 322, 1363
BseCI ATCGAT 1 cut(s) 934
BseDI CCNNGG 1 cut(s) 1361
BseGI GGATG 4 cut(s) 217, 649, 797, 1488
BseLI CCNNNNNNNGG 4 cut(s) 409, 694, 1139, 1258
BseMI GCAATG 3 cut(s) 8, 68, 1509
BseMII CTCAG 3 cut(s) 246, 859, 1305
BseNI ACTGG 2 cut(s) 684, 1326
BseRI GAGGAG 1 cut(s) 1163
BseSI GKGCMC 1 cut(s) 478
BseXI GCAGC 5 cut(s) 52, 292, 782, 940, 1427
BsgI GTGCAG 1 cut(s) 1232
BshFI GGCC 5 cut(s) 178, 203, 325, 476, 948
BshNI GGYRCC 1 cut(s) 1532
BshVI ATCGAT 1 cut(s) 934
BsiHKAI GWGCWC 1 cut(s) 1410
BsiSI CCGG 1 cut(s) 1252
BslFI GGGAC 2 cut(s) 988, 1526
BslI CCNNNNNNNGG 4 cut(s) 409, 694, 1139, 1258
BsmAI GTCTC 3 cut(s) 441, 848, 1248
BsmFI GGGAC 2 cut(s) 988, 1526
BsmI GAATGC 3 cut(s) 404, 669, 1502
BsnI GGCC 5 cut(s) 178, 203, 325, 476, 948
Bsp120I GGGCCC 1 cut(s) 474
Bsp1286I GDGCHC 2 cut(s) 478, 1410
Bsp1407I TGTACA 2 cut(s) 132, 267
Bsp143I GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
BspACI CCGC 5 cut(s) 571, 752, 802, 1437, 1514
BspANI GGCC 5 cut(s) 178, 203, 325, 476, 948
BspCNI CTCAG 3 cut(s) 245, 858, 1306
BspDI ATCGAT 1 cut(s) 934
BspLI GGNNCC 5 cut(s) 475, 476, 1116, 1223, 1534
BspPI GGATC 4 cut(s) 344, 362, 1216, 1229
BspT107I GGYRCC 1 cut(s) 1532
BspTI CTTAAG 1 cut(s) 878
BsrDI GCAATG 3 cut(s) 8, 68, 1509
BsrGI TGTACA 2 cut(s) 132, 267
BsrI ACTGG 2 cut(s) 684, 1326
BssECI CCNNGG 1 cut(s) 1361
BssMI GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
Bst2UI CCWGG 2 cut(s) 322, 1363
Bst4CI ACNGT 7 cut(s) 500, 513, 697, 811, 920, 1088, 1108
Bst6I CTCTTC 1 cut(s) 1433
BstAFI CTTAAG 1 cut(s) 878
BstAPI GCANNNNNTGC 1 cut(s) 725
BstAUI TGTACA 2 cut(s) 132, 267
BstC8I GCNNGC 3 cut(s) 45, 415, 622
BstDEI CTNAG 4 cut(s) 232, 845, 1257, 1314
BstF5I GGATG 4 cut(s) 217, 649, 797, 1488
BstH2I RGCGCY 1 cut(s) 776
BstHHI GCGC 1 cut(s) 775
BstKTI GATC 6 cut(s) 339, 370, 444, 1029, 1199, 1224
BstMAI GTCTC 3 cut(s) 441, 848, 1248
BstMBI GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
BstMWI GCNNNNNNNGC 5 cut(s) 19, 184, 322, 725, 836
BstNI CCWGG 2 cut(s) 322, 1363
BstNSI RCATGY 3 cut(s) 106, 312, 1400
BstSCI CCNGG 2 cut(s) 320, 1361
BstSFI CTRYAG 1 cut(s) 1030
BstSLI GKGCMC 1 cut(s) 478
BstV1I GCAGC 5 cut(s) 52, 292, 782, 940, 1427
BstV2I GAAGAC 1 cut(s) 1072
BstX2I RGATCY 2 cut(s) 367, 1221
BstYI RGATCY 2 cut(s) 367, 1221
Bsu15I ATCGAT 1 cut(s) 934
BsuI GTATCC 1 cut(s) 1463
BsuRI GGCC 5 cut(s) 178, 203, 325, 476, 948
BsuTUI ATCGAT 1 cut(s) 934
BtsCI GGATG 4 cut(s) 217, 649, 797, 1488
BtsIMutI CAGTG 5 cut(s) 56, 518, 677, 816, 1311
Cac8I GCNNGC 3 cut(s) 45, 415, 622
CaiI CAGNNNCTG 1 cut(s) 852
CfoI GCGC 1 cut(s) 775
Cfr13I GGNCC 6 cut(s) 474, 475, 589, 799, 874, 947
ClaI ATCGAT 1 cut(s) 934
Csp6I GTAC 5 cut(s) 133, 268, 436, 463, 903
CviAII CATG 7 cut(s) 103, 136, 309, 490, 1022, 1240, 1397
CviQI GTAC 5 cut(s) 133, 268, 436, 463, 903
DdeI CTNAG 4 cut(s) 232, 845, 1257, 1314
DpnI GATC 6 cut(s) 338, 369, 443, 1028, 1198, 1223
DpnII GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
Eam1104I CTCTTC 1 cut(s) 1433
EarI CTCTTC 1 cut(s) 1433
Ecl136II GAGCTC 1 cut(s) 1408
Eco147I AGGCCT 1 cut(s) 178
Eco24I GRGCYC 2 cut(s) 478, 1410
Eco47I GGWCC 3 cut(s) 589, 799, 874
Eco47III AGCGCT 1 cut(s) 774
Eco53kI GAGCTC 1 cut(s) 1408
Eco57I CTGAAG 2 cut(s) 95, 1140
EcoICRI GAGCTC 1 cut(s) 1408
EcoO109I RGGNCCY 2 cut(s) 474, 475
EcoRII CCWGG 2 cut(s) 320, 1361
EcoT38I GRGCYC 2 cut(s) 478, 1410
FaeI CATG 7 cut(s) 106, 139, 312, 493, 1025, 1243, 1400
FaqI GGGAC 2 cut(s) 988, 1526
FatI CATG 7 cut(s) 102, 135, 308, 489, 1021, 1239, 1396
FauI CCCGC 2 cut(s) 745, 1507
Fnu4HI GCNGC 6 cut(s) 41, 306, 771, 929, 1438, 1441
FokI GGATG 4 cut(s) 224, 656, 804, 1475
FriOI GRGCYC 2 cut(s) 478, 1410
Fsp4HI GCNGC 6 cut(s) 41, 306, 771, 929, 1438, 1441
FspBI CTAG 3 cut(s) 395, 840, 1194
GlaI GCGC 1 cut(s) 774
GluI GCNGC 6 cut(s) 41, 306, 771, 929, 1438, 1441
GsuI CTGGAG 1 cut(s) 807
HaeII RGCGCY 1 cut(s) 776
HaeIII GGCC 5 cut(s) 178, 203, 325, 476, 948
HapII CCGG 1 cut(s) 1252
HhaI GCGC 1 cut(s) 775
Hin1II CATG 7 cut(s) 106, 139, 312, 493, 1025, 1243, 1400
Hin6I GCGC 1 cut(s) 773
HinP1I GCGC 1 cut(s) 773
HinfI GANTC 2 cut(s) 359, 1419
HpaII CCGG 1 cut(s) 1252
HphI GGTGA 1 cut(s) 895
Hpy166II GTNNAC 3 cut(s) 133, 592, 1150
Hpy188I TCNGA 7 cut(s) 331, 446, 601, 643, 836, 848, 874
Hpy188III TCNNGA 4 cut(s) 353, 1118, 1219, 1336
Hpy8I GTNNAC 3 cut(s) 133, 592, 1150
HpyAV CCTTC 8 cut(s) 121, 168, 336, 479, 739, 790, 991, 1167
HpyCH4III ACNGT 7 cut(s) 500, 513, 697, 811, 920, 1088, 1108
HpyCH4IV ACGT 1 cut(s) 905
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 184, 322, 725, 836
HpyF3I CTNAG 4 cut(s) 232, 845, 1257, 1314
HpySE526I ACGT 1 cut(s) 905
Hsp92II CATG 7 cut(s) 106, 139, 312, 493, 1025, 1243, 1400
HspAI GCGC 1 cut(s) 773
Kzo9I GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
LmnI GCTCC 4 cut(s) 302, 391, 700, 1363
Lsp1109I GCAGC 5 cut(s) 52, 292, 782, 940, 1427
LweI GCATC 4 cut(s) 102, 526, 940, 1318
MaeI CTAG 3 cut(s) 395, 840, 1194
MaeII ACGT 1 cut(s) 905
MaeIII GTNAC 4 cut(s) 515, 675, 1069, 1309
MalI GATC 6 cut(s) 338, 369, 443, 1028, 1198, 1223
MboI GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
MboII GAAGA 6 cut(s) 183, 1024, 1072, 1420, 1423, 1498
MflI RGATCY 2 cut(s) 367, 1221
MhlI GDGCHC 2 cut(s) 478, 1410
MmeI TCCRAC 4 cut(s) 395, 571, 1165, 1396
MseI TTAA 5 cut(s) 159, 207, 378, 879, 1376
MslI CAYNNNNRTG 3 cut(s) 107, 501, 809
MspCI CTTAAG 1 cut(s) 878
MspI CCGG 1 cut(s) 1252
MspR9I CCNGG 2 cut(s) 322, 1363
Mva1269I GAATGC 3 cut(s) 404, 669, 1502
MvaI CCWGG 2 cut(s) 322, 1363
MwoI GCNNNNNNNGC 5 cut(s) 19, 184, 322, 725, 836
NdeII GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
NlaIII CATG 7 cut(s) 106, 139, 312, 493, 1025, 1243, 1400
NlaIV GGNNCC 5 cut(s) 475, 476, 1116, 1223, 1534
NmuCI GTSAC 4 cut(s) 515, 675, 1069, 1309
NspI RCATGY 3 cut(s) 106, 312, 1400
OliI CACNNNNGTG 1 cut(s) 809
PceI AGGCCT 1 cut(s) 178
PciI ACATGT 1 cut(s) 1396
PctI GAATGC 3 cut(s) 404, 669, 1502
PfeI GAWTC 2 cut(s) 359, 1419
PkrI GCNGC 6 cut(s) 42, 307, 772, 930, 1439, 1442
PscI ACATGT 1 cut(s) 1396
Psp124BI GAGCTC 1 cut(s) 1410
Psp6I CCWGG 2 cut(s) 320, 1361
PspGI CCWGG 2 cut(s) 320, 1361
PspN4I GGNNCC 5 cut(s) 475, 476, 1116, 1223, 1534
PspOMI GGGCCC 1 cut(s) 474
PspPI GGNCC 6 cut(s) 474, 475, 589, 799, 874, 947
PsrI GAACNNNNNNTAC 2 cut(s) 221, 253
PstNI CAGNNNCTG 1 cut(s) 852
PsuI RGATCY 2 cut(s) 367, 1221
RsaI GTAC 5 cut(s) 134, 269, 437, 464, 904
RsaNI GTAC 5 cut(s) 133, 268, 436, 463, 903
RseI CAYNNNNRTG 3 cut(s) 107, 501, 809
SacI GAGCTC 1 cut(s) 1410
SaqAI TTAA 5 cut(s) 159, 207, 378, 879, 1376
SatI GCNGC 6 cut(s) 41, 306, 771, 929, 1438, 1441
Sau3AI GATC 6 cut(s) 336, 367, 441, 1026, 1196, 1221
Sau96I GGNCC 6 cut(s) 474, 475, 589, 799, 874, 947
ScrFI CCNGG 2 cut(s) 322, 1363
SduI GDGCHC 2 cut(s) 478, 1410
SfaNI GCATC 4 cut(s) 102, 526, 940, 1318
SfcI CTRYAG 1 cut(s) 1030
SinI GGWCC 3 cut(s) 589, 799, 874
SmiMI CAYNNNNRTG 3 cut(s) 107, 501, 809
SmlI CTYRAG 4 cut(s) 479, 878, 1334, 1403
SmoI CTYRAG 4 cut(s) 479, 878, 1334, 1403
SseBI AGGCCT 1 cut(s) 178
SsiI CCGC 5 cut(s) 571, 752, 802, 1437, 1514
SspI AATATT 1 cut(s) 153
SspMI CTAG 3 cut(s) 395, 840, 1194
SstI GAGCTC 1 cut(s) 1410
StuI AGGCCT 1 cut(s) 178
StyD4I CCNGG 2 cut(s) 320, 1361
TaaI ACNGT 7 cut(s) 500, 513, 697, 811, 920, 1088, 1108
TaiI ACGT 1 cut(s) 908
TaqI TCGA 2 cut(s) 934, 1372
TatI WGTACW 2 cut(s) 132, 267
TauI GCSGC 1 cut(s) 1440
TfiI GAWTC 2 cut(s) 359, 1419
Tru1I TTAA 5 cut(s) 159, 207, 378, 879, 1376
Tru9I TTAA 5 cut(s) 159, 207, 378, 879, 1376
TscAI CASTG 5 cut(s) 63, 518, 684, 816, 1318
TseFI GTSAC 4 cut(s) 515, 675, 1069, 1309
TseI GCWGC 5 cut(s) 40, 305, 770, 928, 1440
Tsp45I GTSAC 4 cut(s) 515, 675, 1069, 1309
TspDTI ATGAA 7 cut(s) 288, 506, 906, 1010, 1314, 1477, 1498
TspGWI ACGGA 1 cut(s) 1482
TspRI CASTG 5 cut(s) 63, 518, 684, 816, 1318
Vha464I CTTAAG 1 cut(s) 878
VpaK11BI GGWCC 3 cut(s) 589, 799, 874
XapI RAATTY 4 cut(s) 258, 629, 637, 857
XceI RCATGY 3 cut(s) 106, 312, 1400
XcmI CCANNNNNNNNNTGG 2 cut(s) 382, 583
XspI CTAG 3 cut(s) 395, 840, 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.