Prupe.2G121200_v2.0.a1
MYB Family

Alcohol dehydrogenase transcription factor Myb/SANT-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0010006
Physical Location & Seq
Reverse (-)
17845332 .. 17847719
2388 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G121200.1

Sequence Viewer

Length: 891 bp
TCATCGACTCCTATCGGCGACAAGTGGTACTCTCTCCGCCGCGGCAACCTCAAGGCCACCCACTGGCAGGAGGTCGCCGACGCCGTCGCTCACCGCTGCCCCGCCGCTTCTCCTCCCAAGACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTACGGAAACGGTACCGGACGGAGATCTCGAGGGCCAAGTCCATGCCTTTGTCCAGATTCACCTCTTCCTGGGTCCACTTCAAGCGGATGGACGCCATGGAGAAGGGTCCCGCGGCTGCTAAGAGGGAGAACTCGGAGAGTCCTGGGGAGGAGGACGAGAATGATGAGAATGAGGAAGAGGACGATCAGGATCAGGAGCTGTATGAGGAGCTGAGATATGGGTCGAATATGAAGAGCATGAGCAAGTTGTATAGAAATGGAGTTGGGGTTGGAGGCAGTGGTGGAAGTAGTGGAGGTGGGTTTAGGATTCGGATCCCAACTGGGGTTAGTATAGCTCAGCCCGGGACCAAGGTTTATCCGAAAATGGATCCGAAATTCGGGTTGAATTCGAATTCGGGATCGGGTTCAGGGCCGGGGTATGGGAGTGCTAAGGTGATGAGGGAGTGTGGGAATTCGGTGAGGCCTGGATTGGGGAAAAGGGAGAGGGAGGGGAGAGAGAGGGAGAGAGACCCCGTGGCGGAGATGGTTTCGGCGATCAAGGTTTTGGGAGATGGGTTTGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGACGATGCGGATGGAGATGGAGATGAAGCGGACCGAGATGATTTTGGACTCGCAGCAGAGGATTGTGGAGGCTTTTGCCAAGGCAGTTTCGGAGAAGAAGAAGAAGGCCAAGCGAATGCCCTCCCCGGAGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

297

Amino Acids

33.14

Weight (kDa)

9.41

Isoelectric Point (pI)

52.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 165
AccB1I GGYRCC 1 cut(s) 165
AccB7I CCANNNNNTGG 2 cut(s) 63, 145
AccII CGCG 2 cut(s) 42, 266
AclWI GGATC 6 cut(s) 351, 460, 473, 515, 528, 559
AcsI RAATTY 4 cut(s) 527, 538, 544, 604
AcyI GRCGYC 2 cut(s) 81, 246
AfaI GTAC 2 cut(s) 29, 167
AfiI CCNNNNNNNGG 9 cut(s) 63, 67, 145, 222, 475, 530, 572, 623, 670
AgsI TTSAA 2 cut(s) 235, 538
AjnI CCWGG 3 cut(s) 221, 295, 616
AluBI AGCT 4 cut(s) 154, 352, 364, 488
AluI AGCT 4 cut(s) 154, 352, 364, 488
Alw26I GTCTC 2 cut(s) 654, 749
AlwI GGATC 6 cut(s) 351, 460, 473, 515, 528, 559
AlwNI CAGNNNCTG 1 cut(s) 352
Ama87I CYCGRG 2 cut(s) 181, 494
AoxI GGCC 5 cut(s) 54, 186, 563, 614, 861
ApeKI GCWGC 3 cut(s) 96, 269, 808
ApoI RAATTY 4 cut(s) 527, 538, 544, 604
Asp718I GGTACC 1 cut(s) 165
AspS9I GGNCC 6 cut(s) 186, 226, 260, 498, 563, 786
AsuC2I CCSGG 4 cut(s) 495, 496, 567, 881
AsuHPI GGTGA 4 cut(s) 83, 205, 598, 622
AsuII TTCGAA 1 cut(s) 542
AvaI CYCGRG 2 cut(s) 181, 494
AvaII GGWCC 4 cut(s) 226, 260, 498, 786
BamHI GGATCC 2 cut(s) 465, 520
BanI GGYRCC 1 cut(s) 165
BbvI GCAGC 3 cut(s) 83, 256, 820
BccI CCATC 9 cut(s) 139, 235, 670, 698, 712, 727, 733, 760, 766
BceAI ACGGC 2 cut(s) 68, 110
BciT130I CCWGG 3 cut(s) 223, 297, 618
BcnI CCSGG 4 cut(s) 495, 496, 567, 881
BcoDI GTCTC 2 cut(s) 654, 749
BglII AGATCT 1 cut(s) 177
BisI GCNGC 8 cut(s) 40, 43, 97, 105, 136, 267, 270, 809
BlpI GCTNAGC 1 cut(s) 489
BlsI GCNGC 8 cut(s) 41, 44, 98, 106, 137, 268, 271, 810
Bme1390I CCNGG 7 cut(s) 223, 297, 495, 496, 567, 618, 881
Bme18I GGWCC 4 cut(s) 226, 260, 498, 786
BmeT110I CYCGRG 2 cut(s) 181, 494
BmgT120I GGNCC 6 cut(s) 186, 226, 260, 498, 563, 786
BmiI GGNNCC 7 cut(s) 167, 227, 261, 262, 467, 499, 522
BmrFI CCNGG 7 cut(s) 223, 297, 495, 496, 567, 618, 881
BmrI ACTGGG 1 cut(s) 483
BmsI GCATC 1 cut(s) 750
BmuI ACTGGG 1 cut(s) 483
BoxI GACNNNNGTC 1 cut(s) 125
Bpu10I CCTNAGC 1 cut(s) 582
Bpu1102I GCTNAGC 1 cut(s) 489
Bpu14I TTCGAA 1 cut(s) 542
BpuEI CTTGAG 1 cut(s) 35
BpuMI CCSGG 4 cut(s) 495, 496, 567, 881
BsaBI GATNNNNATC 2 cut(s) 342, 464
BsaHI GRCGYC 2 cut(s) 81, 246
BsaI GGTCTC 1 cut(s) 654
BsaWI WCCGGW 1 cut(s) 168
BsaXI ACNNNNNCTCC 2 cut(s) 405, 435
Bsc4I CCNNNNNNNGG 9 cut(s) 63, 67, 145, 222, 475, 530, 572, 623, 670
Bse1I ACTGG 3 cut(s) 68, 130, 478
Bse8I GATNNNNATC 2 cut(s) 342, 464
BseBI CCWGG 3 cut(s) 223, 297, 618
BseGI GGATG 3 cut(s) 246, 723, 771
BseJI GATNNNNATC 2 cut(s) 342, 464
BseLI CCNNNNNNNGG 9 cut(s) 63, 67, 145, 222, 475, 530, 572, 623, 670
BseMII CTCAG 2 cut(s) 356, 503
BseNI ACTGG 3 cut(s) 68, 130, 478
BseRI GAGGAG 3 cut(s) 102, 317, 374
BseXI GCAGC 3 cut(s) 83, 256, 820
Bsh1236I CGCG 2 cut(s) 42, 266
BshFI GGCC 5 cut(s) 56, 188, 565, 616, 863
BshNI GGYRCC 1 cut(s) 165
BsiHKCI CYCGRG 2 cut(s) 181, 494
BsiSI CCGG 4 cut(s) 169, 495, 566, 881
BslFI GGGAC 2 cut(s) 246, 511
BslI CCNNNNNNNGG 9 cut(s) 63, 67, 145, 222, 475, 530, 572, 623, 670
BsmAI GTCTC 2 cut(s) 654, 749
BsmBI CGTCTC 1 cut(s) 749
BsmFI GGGAC 2 cut(s) 246, 511
BsmI GAATGC 1 cut(s) 876
BsnI GGCC 5 cut(s) 56, 188, 565, 616, 863
Bso31I GGTCTC 1 cut(s) 654
BsoBI CYCGRG 2 cut(s) 181, 494
Bsp119I TTCGAA 1 cut(s) 542
Bsp143I GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
Bsp1720I GCTNAGC 1 cut(s) 489
Bsp19I CCATGG 1 cut(s) 249
BspANI GGCC 5 cut(s) 56, 188, 565, 616, 863
BspCNI CTCAG 2 cut(s) 357, 502
BspFNI CGCG 2 cut(s) 42, 266
BspLI GGNNCC 7 cut(s) 167, 227, 261, 262, 467, 499, 522
BspPI GGATC 6 cut(s) 351, 460, 473, 515, 528, 559
BspQI GCTCTTC 1 cut(s) 380
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 165
BspTNI GGTCTC 1 cut(s) 654
BsrI ACTGG 3 cut(s) 68, 130, 478
BssMI GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
BssNI GRCGYC 2 cut(s) 81, 246
BssT1I CCWWGG 3 cut(s) 249, 501, 834
Bst2UI CCWGG 3 cut(s) 223, 297, 618
Bst4CI ACNGT 1 cut(s) 165
Bst6I CTCTTC 3 cut(s) 223, 324, 380
BstACI GRCGYC 2 cut(s) 81, 246
BstBI TTCGAA 1 cut(s) 542
BstDEI CTNAG 4 cut(s) 273, 365, 489, 582
BstDSI CCRYGG 4 cut(s) 40, 249, 264, 666
BstF5I GGATG 3 cut(s) 246, 723, 771
BstFNI CGCG 2 cut(s) 42, 266
BstKTI GATC 8 cut(s) 180, 340, 346, 468, 523, 554, 690, 753
BstMAI GTCTC 2 cut(s) 654, 749
BstMBI GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
BstNI CCWGG 3 cut(s) 223, 297, 618
BstPAI GACNNNNGTC 1 cut(s) 125
BstSCI CCNGG 7 cut(s) 221, 295, 493, 494, 565, 616, 879
BstUI CGCG 2 cut(s) 42, 266
BstV1I GCAGC 3 cut(s) 83, 256, 820
BstX2I RGATCY 3 cut(s) 177, 465, 520
BstYI RGATCY 3 cut(s) 177, 465, 520
BsuRI GGCC 5 cut(s) 56, 188, 565, 616, 863
BtgI CCRYGG 4 cut(s) 40, 249, 264, 666
BtsCI GGATG 3 cut(s) 246, 723, 771
BtsI GCAGTG 1 cut(s) 436
BtsIMutI CAGTG 3 cut(s) 61, 137, 436
CaiI CAGNNNCTG 1 cut(s) 352
Cfr13I GGNCC 6 cut(s) 186, 226, 260, 498, 563, 786
Cfr42I CCGCGG 2 cut(s) 43, 267
Cfr9I CCCGGG 1 cut(s) 494
CpoI CGGWCCG 1 cut(s) 786
CseI GACGC 2 cut(s) 89, 254
Csp6I GTAC 2 cut(s) 28, 166
CspI CGGWCCG 1 cut(s) 786
CviAII CATG 3 cut(s) 196, 250, 391
CviQI GTAC 2 cut(s) 28, 166
DdeI CTNAG 4 cut(s) 273, 365, 489, 582
DpnI GATC 8 cut(s) 179, 339, 345, 467, 522, 553, 689, 752
DpnII GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
Eam1104I CTCTTC 3 cut(s) 223, 324, 380
EarI CTCTTC 3 cut(s) 223, 324, 380
EciI GGCGGA 2 cut(s) 26, 686
Eco130I CCWWGG 3 cut(s) 249, 501, 834
Eco147I AGGCCT 1 cut(s) 616
Eco31I GGTCTC 1 cut(s) 654
Eco47I GGWCC 4 cut(s) 226, 260, 498, 786
Eco88I CYCGRG 2 cut(s) 181, 494
EcoO109I RGGNCCY 1 cut(s) 260
EcoRI GAATTC 3 cut(s) 538, 544, 604
EcoRII CCWGG 3 cut(s) 221, 295, 616
EcoT14I CCWWGG 3 cut(s) 249, 501, 834
ErhI CCWWGG 3 cut(s) 249, 501, 834
Esp3I CGTCTC 1 cut(s) 749
FaeI CATG 3 cut(s) 199, 253, 394
FaqI GGGAC 2 cut(s) 246, 511
FatI CATG 3 cut(s) 195, 249, 390
FauI CCCGC 2 cut(s) 109, 271
Fnu4HI GCNGC 8 cut(s) 40, 43, 97, 105, 136, 267, 270, 809
FokI GGATG 3 cut(s) 253, 730, 778
Fsp4HI GCNGC 8 cut(s) 40, 43, 97, 105, 136, 267, 270, 809
GluI GCNGC 8 cut(s) 40, 43, 97, 105, 136, 267, 270, 809
HaeIII GGCC 5 cut(s) 56, 188, 565, 616, 863
HapII CCGG 4 cut(s) 169, 495, 566, 881
HgaI GACGC 2 cut(s) 89, 254
Hin1I GRCGYC 2 cut(s) 81, 246
Hin1II CATG 3 cut(s) 199, 253, 394
HinfI GANTC 5 cut(s) 7, 210, 292, 460, 803
HpaII CCGG 4 cut(s) 169, 495, 566, 881
HphI GGTGA 4 cut(s) 83, 205, 598, 622
Hpy166II GTNNAC 1 cut(s) 229
Hpy188I TCNGA 5 cut(s) 289, 465, 513, 525, 847
Hpy188III TCNNGA 6 cut(s) 181, 207, 341, 347, 549, 754
Hpy8I GTNNAC 1 cut(s) 229
Hpy99I CGWCG 2 cut(s) 83, 89
HpyAV CCTTC 2 cut(s) 250, 853
HpyCH4III ACNGT 1 cut(s) 165
HpyF3I CTNAG 4 cut(s) 273, 365, 489, 582
Hsp92I GRCGYC 2 cut(s) 81, 246
Hsp92II CATG 3 cut(s) 199, 253, 394
KflI GGGWCCC 1 cut(s) 260
KpnI GGTACC 1 cut(s) 169
KspI CCGCGG 2 cut(s) 43, 267
Kzo9I GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 3 cut(s) 349, 361, 721
Lsp1109I GCAGC 3 cut(s) 83, 256, 820
LweI GCATC 1 cut(s) 750
MalI GATC 8 cut(s) 179, 339, 345, 467, 522, 553, 689, 752
MboI GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
MboII GAAGA 7 cut(s) 210, 341, 397, 742, 862, 865, 868
MflI RGATCY 3 cut(s) 177, 465, 520
MluCI AATT 4 cut(s) 527, 538, 544, 604
MlyI GAGTC 2 cut(s) 301, 797
MmeI TCCRAC 1 cut(s) 403
MspA1I CMGCKG 3 cut(s) 42, 96, 266
MspI CCGG 4 cut(s) 169, 495, 566, 881
MspR9I CCNGG 7 cut(s) 223, 297, 495, 496, 567, 618, 881
Mva1269I GAATGC 1 cut(s) 876
MvaI CCWGG 3 cut(s) 223, 297, 618
MvnI CGCG 2 cut(s) 42, 266
NciI CCSGG 4 cut(s) 495, 496, 567, 881
NcoI CCATGG 1 cut(s) 249
NdeII GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
NlaIII CATG 3 cut(s) 199, 253, 394
NlaIV GGNNCC 7 cut(s) 167, 227, 261, 262, 467, 499, 522
NspV TTCGAA 1 cut(s) 542
PaeR7I CTCGAG 1 cut(s) 181
PceI AGGCCT 1 cut(s) 616
PciSI GCTCTTC 1 cut(s) 380
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 179
PctI GAATGC 1 cut(s) 876
PfeI GAWTC 2 cut(s) 210, 460
PflFI GACNNNGTC 1 cut(s) 83
PflMI CCANNNNNTGG 2 cut(s) 63, 145
PkrI GCNGC 8 cut(s) 41, 44, 98, 106, 137, 268, 271, 810
PleI GAGTC 2 cut(s) 300, 797
PpsI GAGTC 2 cut(s) 300, 797
PpuMI RGGWCCY 1 cut(s) 260
PshAI GACNNNNGTC 1 cut(s) 125
Psp5II RGGWCCY 1 cut(s) 260
Psp6I CCWGG 3 cut(s) 221, 295, 616
PspGI CCWGG 3 cut(s) 221, 295, 616
PspN4I GGNNCC 7 cut(s) 167, 227, 261, 262, 467, 499, 522
PspPI GGNCC 6 cut(s) 186, 226, 260, 498, 563, 786
PspPPI RGGWCCY 1 cut(s) 260
PstNI CAGNNNCTG 1 cut(s) 352
PsuI RGATCY 3 cut(s) 177, 465, 520
PsyI GACNNNGTC 1 cut(s) 83
RsaI GTAC 2 cut(s) 29, 167
RsaNI GTAC 2 cut(s) 28, 166
Rsr2I CGGWCCG 1 cut(s) 786
RsrII CGGWCCG 1 cut(s) 786
SacII CCGCGG 2 cut(s) 43, 267
SapI GCTCTTC 1 cut(s) 380
SatI GCNGC 8 cut(s) 40, 43, 97, 105, 136, 267, 270, 809
Sau3AI GATC 8 cut(s) 177, 337, 343, 465, 520, 551, 687, 750
Sau96I GGNCC 6 cut(s) 186, 226, 260, 498, 563, 786
SchI GAGTC 2 cut(s) 301, 797
ScrFI CCNGG 7 cut(s) 223, 297, 495, 496, 567, 618, 881
SfaNI GCATC 1 cut(s) 750
Sfr274I CTCGAG 1 cut(s) 181
Sfr303I CCGCGG 2 cut(s) 43, 267
SfuI TTCGAA 1 cut(s) 542
SgrBI CCGCGG 2 cut(s) 43, 267
SinI GGWCC 4 cut(s) 226, 260, 498, 786
SlaI CTCGAG 1 cut(s) 181
SmaI CCCGGG 1 cut(s) 496
SmlI CTYRAG 2 cut(s) 50, 181
SmoI CTYRAG 2 cut(s) 50, 181
Sse9I AATT 4 cut(s) 527, 538, 544, 604
SseBI AGGCCT 1 cut(s) 616
StuI AGGCCT 1 cut(s) 616
StyD4I CCNGG 7 cut(s) 221, 295, 493, 494, 565, 616, 879
StyI CCWWGG 3 cut(s) 249, 501, 834
TaaI ACNGT 1 cut(s) 165
TaqI TCGA 5 cut(s) 5, 182, 377, 542, 753
TaqII GACCGA 1 cut(s) 803
TasI AATT 4 cut(s) 527, 538, 544, 604
TauI GCSGC 5 cut(s) 42, 45, 107, 138, 269
TfiI GAWTC 2 cut(s) 210, 460
TscAI CASTG 3 cut(s) 68, 137, 436
TseI GCWGC 3 cut(s) 96, 269, 808
TspDTI ATGAA 3 cut(s) 398, 743, 794
TspGWI ACGGA 2 cut(s) 172, 188
TspMI CCCGGG 1 cut(s) 494
TspRI CASTG 3 cut(s) 68, 137, 436
Tth111I GACNNNGTC 1 cut(s) 83
Van91I CCANNNNNTGG 2 cut(s) 63, 145
VpaK11BI GGWCC 4 cut(s) 226, 260, 498, 786
XapI RAATTY 4 cut(s) 527, 538, 544, 604
XhoI CTCGAG 1 cut(s) 181
XmaI CCCGGG 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.