Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007217

Physical Location & Seq

Genomic Coordinates Forward (+)

20218568 .. 20223742

Gene Structure 5175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G145400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGCGTTCTGGGGAACTGAAGTGAAACCCGGAAAGCCTTTCACTCATATCTTTGATGGCTTGAAAGGACGGCTTCACATTTCAGTGGCAACATTGGGGACTGGGACAGCAACCAAAAAAAGCATACTTCAGTGTAATGTAGGAAACAAGAGTCCAGTTTACCTGTGCTCATTGTTTCCTGAGAAGGCTGAATCATTGCAAATAAATGTGGAATTTGAGGAGTCTGAAGAAGTCATCTTCTCGGTAATTGGTCCTCGGAGTGTTCACCTCTCTGGCTACTATCTTGGTGGTCATCGGCATCGCAATTTAGATGATAATTCAGAATCCTATGGGGAAGATATTGCTGACTCAGAAACACAGAGATCCATTAACAGTGAAGAAGATAAGTATGATGATAGTTTTATTGATGACGATGACCCAGAAGTTTACCCATCTTCTCCTGTTTCTGATAGTGGAGATTCTGGTTCTGGTTATCCAGAGGAGGTTTCGAATAAGAAGAAACCTCAGAATGGGAAGGGCGGCCGCAGACGACTTAGAAAGATGTACCAACTGAGTGAGTCAGAAATGGAAAGTGAAGATGAAGACAGATGTCCGATTGCCTCTTTGAAGACAAAATCCGCTTCAAAGAGCACAACAGAGGAAGTGGAAGAAAAAGTTGAGAAGAGAACCGTTGATACCAGCAGCAAGAAGACAGAGGATGGTGTCTTTAATGCTACTGAATCAATCAAAGATGGTGATGATGTGGATGTAGGTGGTCAGTCGAAAAGGCAATTTGACCTTCCAGTAGATCCAGTGTCACCTTCTTCTGAAGTAGGCCCTGAAAATGGTGGAACACCAAAGAGAAAAAGGAAAGAACGGCCAAAGGAGGAGAAATCACTTGAAGCTGGTCTACTTGAAAAAGAGGATGAAGCCCAGAAAGATGAGGCAAGAGCTGACAATAGGACCCAGAATTTGTGTGTGGAAGATGGACAAGAGCTGAAGGTGTCCAACAATAGCGAAGCTAAAGTGCCAGATAATTTCTCGAAGCCTTTAACAGAGGTCGTCCCCGAAAATGGTGAAAGACCAAAAAAGAAAAGGAGGAAGAGGGTGGAGGAGAAAACATGTGAGGTTGTCAGCACTAACCCTGATAATGTTGTCAAAGAGGATAAAGGCCAGCAGGATGAGTCAAAGGGTGACATGTGCCAAGATCTGCCAGTGAGAAGTGAACAAAATCAGAAGTCGGCCAAGGATGGGAGTTCTGGCCATTATTCAGATAGATTTGTTGATGGTCAATCTGATGAGAAGAAAGTTAAAAAGAAGAAAAAAAGTAAAACCCAAGCACATGGGGAAGCTGTGAACACAGATGTACCTCCCTTGGTGGCAGAAGGGAATGCTGATGCCAAGCCATCTCAAATTAGGACCTTCCCAAGTGGATTGAGTATTGAGGAGTTAGAAGCGGGAAAACCAGACGGGAAAATTGCCACTTCAGGGAAAAAGATCAGCGTTCACTATGTTGGCAAGTTGAAAGAGAATGGAAGAGTAATTGACTCAACTGTTGGCAGTGCTCCTTCCAAGTTTCGCTTAGGTCAGGGAAAAGTTATAGACGGCTGGGATGTTGGTCTTGATGGTATGCGAGTTGGCGAAAAAAGAAGACTTGTTATCCCACCACCAATGGGCTTTGGGAGCAATGGAGACGGTAAAGGCGTGCCACCAAACGCATGGCTGGTATACGATGTTGAATTACTGAAAGTTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0031497 GO:0031974 GO:0031981 GO:0034622 GO:0034728 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0051276 GO:0065003 GO:0065004 GO:0070013 GO:0071103 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

579

Amino Acids

63.51

Weight (kDa)

5.41

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12340 AT3G12340 AT3G12340
fragaria_vesca	FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890
malus_domestica	MD00G1063900.v1.1
prunus_persica	Prupe.2G145400_v2.0.a1
pyrus_communis	pycom16g26260
rosa_chinensis	RchiOBHm_Chr1g0350561
rosa_laevigata	RLG00000028473
rosa_multiflora	Rmu_co8266255.1_g000001 Rmu_sc0009041.1_g000004
rosa_roxburghii	Rroxscaffold_4G00304730
rosa_rugosa	Rorug01G0212200
rosa_samantha	Rh1AG226700 Rh1BG195400 Rh1CG211500 Rh1DG223400
rosa_wichuraiana	Rw1G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	889, 1707
AciI	CCGC	4 cut(s)	519, 523, 618, 1436
AclWI	GGATC	2 cut(s)	357, 782
AcoI	YGGCCR	4 cut(s)	520, 857, 1221, 1240
AcsI	RAATTY	2 cut(s)	212, 949
AcuI	CTGAAG	6 cut(s)	39, 113, 246, 828, 998, 1449
AfaI	GTAC	2 cut(s)	545, 1347
AfiI	CCNNNNNNNGG	6 cut(s)	509, 824, 1052, 1230, 1467, 1652
AflIII	ACRYGT	2 cut(s)	1100, 1176
AgsI	TTSAA	7 cut(s)	64, 607, 624, 881, 896, 1504, 1718
AluBI	AGCT	5 cut(s)	884, 932, 976, 1001, 1331
AluI	AGCT	5 cut(s)	884, 932, 976, 1001, 1331
Alw21I	GWGCWC	3 cut(s)	170, 632, 1546
Alw26I	GTCTC	1 cut(s)	1665
AlwI	GGATC	2 cut(s)	357, 782
AoxI	GGCC	6 cut(s)	520, 814, 857, 1150, 1221, 1240
ApeKI	GCWGC	1 cut(s)	681
ApoI	RAATTY	2 cut(s)	212, 949
ArsI	GACNNNNNNTTYG	2 cut(s)	934, 966
AspS9I	GGNCC	4 cut(s)	251, 815, 942, 1398
AsuC2I	CCSGG	1 cut(s)	30
AsuHPI	GGTGA	5 cut(s)	257, 746, 789, 1067, 1184
AsuII	TTCGAA	1 cut(s)	488
AvaII	GGWCC	3 cut(s)	251, 942, 1398
BaeI	ACNNNNGTAYC	2 cut(s)	1329, 1362
BalI	TGGCCA	1 cut(s)	1242
BarI	GAAGNNNNNNTAC	2 cut(s)	873, 905
BbsI	GAAGAC	4 cut(s)	588, 614, 695, 1636
Bbv12I	GWGCWC	3 cut(s)	170, 632, 1546
BbvI	GCAGC	1 cut(s)	693
BccI	CCATC	9 cut(s)	50, 439, 692, 725, 959, 1223, 1259, 1393, 1598
BceAI	ACGGC	3 cut(s)	86, 872, 1600
BcnI	CCSGG	1 cut(s)	30
BcoDI	GTCTC	1 cut(s)	1665
BglII	AGATCT	1 cut(s)	1186
BisI	GCNGC	3 cut(s)	520, 523, 682
BlsI	GCNGC	3 cut(s)	521, 524, 683
Bme1390I	CCNGG	1 cut(s)	30
Bme18I	GGWCC	3 cut(s)	251, 942, 1398
BmgT120I	GGNCC	4 cut(s)	251, 815, 942, 1398
BmiI	GGNNCC	1 cut(s)	944
BmrFI	CCNGG	1 cut(s)	30
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	2 cut(s)	307, 1366
BmuI	ACTGGG	1 cut(s)	111
BoxI	GACNNNNGTC	1 cut(s)	588
BpiI	GAAGAC	4 cut(s)	588, 614, 695, 1636
Bpu10I	CCTNAGC	1 cut(s)	1561
Bpu14I	TTCGAA	1 cut(s)	488
BpuMI	CCSGG	1 cut(s)	30
BsaJI	CCNNGG	3 cut(s)	254, 1224, 1353
Bsc4I	CCNNNNNNNGG	6 cut(s)	509, 824, 1052, 1230, 1467, 1652
Bse1I	ACTGG	5 cut(s)	106, 155, 782, 791, 1193
Bse3DI	GCAATG	2 cut(s)	194, 1672
BseDI	CCNNGG	3 cut(s)	254, 1224, 1353
BseGI	GGATG	6 cut(s)	703, 751, 910, 1165, 1234, 1597
BseLI	CCNNNNNNNGG	6 cut(s)	509, 824, 1052, 1230, 1467, 1652
BseMI	GCAATG	2 cut(s)	194, 1672
BseMII	CTCAG	4 cut(s)	171, 363, 518, 542
BseNI	ACTGG	5 cut(s)	106, 155, 782, 791, 1193
BseRI	GAGGAG	5 cut(s)	233, 494, 881, 1106, 1439
BseX3I	CGGCCG	1 cut(s)	520
BseXI	GCAGC	1 cut(s)	693
BseYI	CCCAGC	1 cut(s)	1587
Bsh1285I	CGRYCG	1 cut(s)	523
BshFI	GGCC	6 cut(s)	522, 816, 859, 1152, 1223, 1242
BsiEI	CGRYCG	1 cut(s)	523
BsiHKAI	GWGCWC	3 cut(s)	170, 632, 1546
BsiSI	CCGG	1 cut(s)	30
BslFI	GGGAC	3 cut(s)	112, 118, 1028
BslI	CCNNNNNNNGG	6 cut(s)	509, 824, 1052, 1230, 1467, 1652
BsmAI	GTCTC	1 cut(s)	1665
BsmBI	CGTCTC	1 cut(s)	1665
BsmFI	GGGAC	3 cut(s)	112, 118, 1028
BsmI	GAATGC	1 cut(s)	1375
BsnI	GGCC	6 cut(s)	522, 816, 859, 1152, 1223, 1242
Bsp119I	TTCGAA	1 cut(s)	488
Bsp1286I	GDGCHC	3 cut(s)	170, 632, 1546
Bsp143I	GATC	4 cut(s)	362, 787, 1186, 1476
BspACI	CCGC	4 cut(s)	519, 523, 618, 1436
BspANI	GGCC	6 cut(s)	522, 816, 859, 1152, 1223, 1242
BspCNI	CTCAG	4 cut(s)	172, 362, 517, 543
BspLI	GGNNCC	1 cut(s)	944
BspPI	GGATC	2 cut(s)	357, 782
BspT104I	TTCGAA	1 cut(s)	488
BsrDI	GCAATG	2 cut(s)	194, 1672
BsrI	ACTGG	5 cut(s)	106, 155, 782, 791, 1193
BssECI	CCNNGG	3 cut(s)	254, 1224, 1353
BssMI	GATC	4 cut(s)	362, 787, 1186, 1476
BssNAI	GTATAC	1 cut(s)	1708
BssT1I	CCWWGG	2 cut(s)	1224, 1353
Bst1107I	GTATAC	1 cut(s)	1708
Bst4CI	ACNGT	4 cut(s)	374, 670, 1534, 1676
Bst6I	CTCTTC	3 cut(s)	656, 1076, 1510
BstBI	TTCGAA	1 cut(s)	488
BstC8I	GCNNGC	2 cut(s)	1154, 1685
BstDEI	CTNAG	6 cut(s)	180, 349, 504, 533, 551, 1561
BstF5I	GGATG	6 cut(s)	703, 751, 910, 1165, 1234, 1597
BstKTI	GATC	4 cut(s)	365, 790, 1189, 1479
BstMAI	GTCTC	1 cut(s)	1665
BstMBI	GATC	4 cut(s)	362, 787, 1186, 1476
BstMCI	CGRYCG	1 cut(s)	523
BstMWI	GCNNNNNNNGC	1 cut(s)	1662
BstNSI	RCATGY	2 cut(s)	1104, 1180
BstPAI	GACNNNNGTC	1 cut(s)	588
BstSCI	CCNGG	1 cut(s)	28
BstV1I	GCAGC	1 cut(s)	693
BstV2I	GAAGAC	4 cut(s)	588, 614, 695, 1636
BstX2I	RGATCY	3 cut(s)	362, 787, 1186
BstXI	CCANNNNNNTGG	2 cut(s)	1322, 1698
BstYI	RGATCY	3 cut(s)	362, 787, 1186
BstZ17I	GTATAC	1 cut(s)	1708
BstZI	CGGCCG	1 cut(s)	520
BsuRI	GGCC	6 cut(s)	522, 816, 859, 1152, 1223, 1242
BtgZI	GCGATG	1 cut(s)	284
BtsCI	GGATG	6 cut(s)	703, 751, 910, 1165, 1234, 1597
BtsI	GCAGTG	1 cut(s)	1546
BtsIMutI	CAGTG	6 cut(s)	90, 137, 379, 798, 1200, 1546
Cac8I	GCNNGC	2 cut(s)	1154, 1685
CciNI	GCGGCCGC	1 cut(s)	520
Cfr13I	GGNCC	4 cut(s)	251, 815, 942, 1398
Csp6I	GTAC	2 cut(s)	544, 1346
CviAII	CATG	4 cut(s)	1101, 1177, 1322, 1698
CviQI	GTAC	2 cut(s)	544, 1346
DdeI	CTNAG	6 cut(s)	180, 349, 504, 533, 551, 1561
DpnI	GATC	4 cut(s)	364, 789, 1188, 1478
DpnII	GATC	4 cut(s)	362, 787, 1186, 1476
EaeI	YGGCCR	4 cut(s)	520, 857, 1221, 1240
EagI	CGGCCG	1 cut(s)	520
Eam1104I	CTCTTC	3 cut(s)	656, 1076, 1510
EarI	CTCTTC	3 cut(s)	656, 1076, 1510
EclXI	CGGCCG	1 cut(s)	520
Eco130I	CCWWGG	2 cut(s)	1224, 1353
Eco47I	GGWCC	3 cut(s)	251, 942, 1398
Eco52I	CGGCCG	1 cut(s)	520
Eco57I	CTGAAG	6 cut(s)	39, 113, 246, 828, 998, 1449
EcoO109I	RGGNCCY	3 cut(s)	815, 942, 1398
EcoT14I	CCWWGG	2 cut(s)	1224, 1353
ErhI	CCWWGG	2 cut(s)	1224, 1353
Esp3I	CGTCTC	1 cut(s)	1665
FaeI	CATG	4 cut(s)	1104, 1180, 1325, 1701
FalI	AAGNNNNNCTT	4 cut(s)	57, 89, 1544, 1576
FaqI	GGGAC	3 cut(s)	112, 118, 1028
FatI	CATG	4 cut(s)	1100, 1176, 1321, 1697
FauI	CCCGC	1 cut(s)	1429
FblI	GTMKAC	2 cut(s)	889, 1707
Fnu4HI	GCNGC	3 cut(s)	520, 523, 682
FokI	GGATG	6 cut(s)	710, 758, 917, 1172, 1241, 1604
Fsp4HI	GCNGC	3 cut(s)	520, 523, 682
GluI	GCNGC	3 cut(s)	520, 523, 682
GsaI	CCCAGC	1 cut(s)	1591
HaeIII	GGCC	6 cut(s)	522, 816, 859, 1152, 1223, 1242
HapII	CCGG	1 cut(s)	30
Hin1II	CATG	4 cut(s)	1104, 1180, 1325, 1701
HpaII	CCGG	1 cut(s)	30
HphI	GGTGA	5 cut(s)	257, 746, 789, 1067, 1184
Hpy166II	GTNNAC	8 cut(s)	160, 265, 427, 890, 1205, 1336, 1486, 1708
Hpy188III	TCNNGA	4 cut(s)	179, 476, 1021, 1601
Hpy8I	GTNNAC	8 cut(s)	160, 265, 427, 890, 1205, 1336, 1486, 1708
HpyAV	CCTTC	8 cut(s)	178, 508, 788, 810, 973, 1358, 1411, 1557
HpyCH4III	ACNGT	4 cut(s)	374, 670, 1534, 1676
HpyCH4V	TGCA	1 cut(s)	199
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1662
HpyF3I	CTNAG	6 cut(s)	180, 349, 504, 533, 551, 1561
Hsp92II	CATG	4 cut(s)	1104, 1180, 1325, 1701
Kzo9I	GATC	4 cut(s)	362, 787, 1186, 1476
LmnI	GCTCC	2 cut(s)	1549, 1662
Lsp1109I	GCAGC	1 cut(s)	693
LweI	GCATC	2 cut(s)	307, 1366
MaeIII	GTNAC	2 cut(s)	795, 1172
MalI	GATC	4 cut(s)	364, 789, 1188, 1478
MboI	GATC	4 cut(s)	362, 787, 1186, 1476
MflI	RGATCY	3 cut(s)	362, 787, 1186
MhlI	GDGCHC	3 cut(s)	170, 632, 1546
MlsI	TGGCCA	1 cut(s)	1242
MluNI	TGGCCA	1 cut(s)	1242
MlyI	GAGTC	6 cut(s)	160, 230, 341, 566, 1172, 1520
MmeI	TCCRAC	1 cut(s)	1011
Mox20I	TGGCCA	1 cut(s)	1242
MscI	TGGCCA	1 cut(s)	1242
MseI	TTAA	4 cut(s)	369, 708, 1031, 1290
MslI	CAYNNNNRTG	1 cut(s)	83
Msp20I	TGGCCA	1 cut(s)	1242
MspI	CCGG	1 cut(s)	30
MspR9I	CCNGG	1 cut(s)	30
Mva1269I	GAATGC	1 cut(s)	1375
MwoI	GCNNNNNNNGC	1 cut(s)	1662
NciI	CCSGG	1 cut(s)	30
NdeII	GATC	4 cut(s)	362, 787, 1186, 1476
NlaIII	CATG	4 cut(s)	1104, 1180, 1325, 1701
NlaIV	GGNNCC	1 cut(s)	944
NmuCI	GTSAC	2 cut(s)	795, 1172
NotI	GCGGCCGC	1 cut(s)	520
NspI	RCATGY	2 cut(s)	1104, 1180
NspV	TTCGAA	1 cut(s)	488
PciI	ACATGT	2 cut(s)	1100, 1176
PcsI	WCGNNNNNNNCGW	1 cut(s)	1680
PctI	GAATGC	1 cut(s)	1375
PfeI	GAWTC	4 cut(s)	191, 323, 458, 719
PkrI	GCNGC	3 cut(s)	521, 524, 683
PleI	GAGTC	6 cut(s)	159, 229, 341, 565, 1171, 1520
PpsI	GAGTC	6 cut(s)	159, 229, 341, 565, 1171, 1520
PpuMI	RGGWCCY	2 cut(s)	942, 1398
PscI	ACATGT	2 cut(s)	1100, 1176
PshAI	GACNNNNGTC	1 cut(s)	588
Psp5II	RGGWCCY	2 cut(s)	942, 1398
PspFI	CCCAGC	1 cut(s)	1587
PspN4I	GGNNCC	1 cut(s)	944
PspPI	GGNCC	4 cut(s)	251, 815, 942, 1398
PspPPI	RGGWCCY	2 cut(s)	942, 1398
PsrI	GAACNNNNNNTAC	2 cut(s)	658, 690
PsuI	RGATCY	3 cut(s)	362, 787, 1186
RsaI	GTAC	2 cut(s)	545, 1347
RsaNI	GTAC	2 cut(s)	544, 1346
RseI	CAYNNNNRTG	1 cut(s)	83
SaqAI	TTAA	4 cut(s)	369, 708, 1031, 1290
SatI	GCNGC	3 cut(s)	520, 523, 682
Sau3AI	GATC	4 cut(s)	362, 787, 1186, 1476
Sau96I	GGNCC	4 cut(s)	251, 815, 942, 1398
SchI	GAGTC	6 cut(s)	160, 230, 341, 566, 1172, 1520
ScrFI	CCNGG	1 cut(s)	30
SduI	GDGCHC	3 cut(s)	170, 632, 1546
SfaNI	GCATC	2 cut(s)	307, 1366
SfuI	TTCGAA	1 cut(s)	488
SinI	GGWCC	3 cut(s)	251, 942, 1398
SmiMI	CAYNNNNRTG	1 cut(s)	83
SsiI	CCGC	4 cut(s)	519, 523, 618, 1436
StyD4I	CCNGG	1 cut(s)	28
StyI	CCWWGG	2 cut(s)	1224, 1353
TaaI	ACNGT	4 cut(s)	374, 670, 1534, 1676
TaqI	TCGA	3 cut(s)	488, 761, 1022
TauI	GCSGC	2 cut(s)	522, 525
TfiI	GAWTC	4 cut(s)	191, 323, 458, 719
Tru1I	TTAA	4 cut(s)	369, 708, 1031, 1290
Tru9I	TTAA	4 cut(s)	369, 708, 1031, 1290
TscAI	CASTG	6 cut(s)	90, 137, 379, 798, 1200, 1546
TseFI	GTSAC	2 cut(s)	795, 1172
TseI	GCWGC	1 cut(s)	681
Tsp45I	GTSAC	2 cut(s)	795, 1172
TspDTI	ATGAA	2 cut(s)	594, 921
TspRI	CASTG	6 cut(s)	90, 137, 379, 798, 1200, 1546
VpaK11BI	GGWCC	3 cut(s)	251, 942, 1398
XapI	RAATTY	2 cut(s)	212, 949
XceI	RCATGY	2 cut(s)	1104, 1180
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1695
XmiI	GTMKAC	2 cut(s)	889, 1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.