Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007217

Physical Location & Seq

Genomic Coordinates Reverse (-)

25383294 .. 25387815

Gene Structure 4522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00304730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCTTTCTGGGGAATTGAAGTGAAACCCGGAAAGCCTTTTACTCATAAACCTGATGACTCCAATGGACGGCTTCACATTTCAATGGCAACATTGGGGTTGGGGGCTGCAACCAAAAGAAGCATACTCCAGTGTAATGTAGGAAACAAGAGTCCGGTATATCTATGCGCGTTGTATCCTGAGAAGATCGAGTGTTTGCAACTACATTTGGAATTTGACGAGGCTGATGAAGTCATGTTCTCAGTTCTTGGTCCTCGGAGTGTTCACCTGGCTGGTTACTATCTAGGTGGTCGTCGGCCTTACAATCCAGATGAGTCAGAATCCTTTGGAGAAGATATTGCTGACTCAGAGACACAGAGATCTGTTAACAGTGAAGACGAAAAGTATGATGACAGTTTTATTGATGATGATGATGTTGAAGTCTTCCCATCTACTCCTGCATCTGATGCTACAGATTCTGATTCTTGTTCTGAAGAGGAGTTTTTGGCTAAGAAGAAACCTCAGAAAGGGAAGGCGCAGCACAGACAACTTAGAAAGACGTACGTAATAAGTGATTCAGAAGTTGAAAGTGAAAATGGGGATGACGACAGTCACCCAATTTCCTCTTTGGTTAAGACAAAATCATCCACTGTTGAGAATGCAATACGGGAAATGGAAGAAAAAGTTGACAAGGGAACTGTTGATACCAGCAACAAGAAGGCAGTGGATGATTTTGCTACTGAATCAATTAGACATGCTGATGATGTACTTGTAGATGGTCAGTTGAAGAGGCAATTGGACCTGCCAATTGATCTGTCTTCTAAAGTAGACCTTGAAAATGGGGAAAAGCCAAAAAGAAAAAGGAAAGAACGGCTGCAGGAGGAGAAAACAGTTGGAGCTGATGTCCTTAATAAAGAGGATGAAGCCCAGAAAATTGAAGCAAAAGGTGAAAATAGGAACCAGAATGGACAACTGATGGCAGTAAACCATAGCGGAGCTGAAATGCCAGATAACTTATCTTTGCCTTCCGCGGAGGTTGGCCTTGGAAACAGTGATAAACCAAAGAAGAAAAGGAAGAAGCGGGTGGAGGAGAAAACGGCTGAGGTTATCTGTACTAACCCTGGTAATGATATAAAAGAGGATGAGGCAAAGGGTGACTTCTGCTTGGATCCACCACTCAAAAGTGAACAAAATCAGAAGTCAGCCAAGGATGAGAGTTTTGGCCATGACTCCCATAAACTTGTTGATGAACCTGATGAAAAGAAAATCAAAAAGAAGAAGAAGAAGAAAAGCAAAACCCAATCACATGGAGAAACTGTGAACACAGATATAGCTATCTTGTCAGTAGAAGAGAAGATCACATCCCCCTTGGAGAATGAGGCCAATTATGTCGATGCCAAATCATCTGAAGTTAGAACCGTCCCCAGTGGATTACACATTGAGGAGTTAGAAGCAGGAGAACCAAATGGCAAAGTTGCAACCTCTGGGAAAAAGGCATGTGCTCCATATTTGTTCTTATTGACATTAACTTTTAATGTTATCACTGTTCATTATGTTGGCAAGTTGAAAGAGAATGGAGAAGTAGTTGACTCGTGTGATGGTGGTCCTCCGTCTAAGTTCCGCTTAGGTCAGGGAAAAGTTATGGAGGGTTTGGATGCTGGTATTGATGGTAATGACATGGAACTTGCTTTTAAGTTTGTAATTGGATGCATGCGAGTTGGTGGCAAACGAAGACTTGTTATCCCACCTTCAATGGCTTATGGGAGCAAAGGATATGATAAAGATATACCACCAGACTCATGGCTGGTATACGATGTTGAGTTGGTGAAAGTTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0031497 GO:0031974 GO:0031981 GO:0034622 GO:0034728 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0051276 GO:0065003 GO:0065004 GO:0070013 GO:0071103 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

605

Amino Acids

66.83

Weight (kDa)

5.18

Isoelectric Point (pI)

45.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPL	PF17800	3 - 94	3.4e-23	Nucleoplasmin-like domain
FKBP_C	PF00254	506 - 602	3.4e-23	FKBP-type peptidyl-prolyl cis-trans isomerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12340 AT3G12340 AT3G12340
fragaria_vesca	FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890
malus_domestica	MD00G1063900.v1.1
prunus_persica	Prupe.2G145400_v2.0.a1
pyrus_communis	pycom16g26260
rosa_chinensis	RchiOBHm_Chr1g0350561
rosa_laevigata	RLG00000028473
rosa_multiflora	Rmu_co8266255.1_g000001 Rmu_sc0009041.1_g000004
rosa_roxburghii	Rroxscaffold_4G00304730
rosa_rugosa	Rorug01G0212200
rosa_samantha	Rh1AG226700 Rh1BG195400 Rh1CG211500 Rh1DG223400
rosa_wichuraiana	Rw1G019590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	789
AccI	GTMKAC	2 cut(s)	807, 1788
AccII	CGCG	2 cut(s)	170, 1010
AciI	CCGC	5 cut(s)	972, 1008, 1010, 1060, 1600
AclWI	GGATC	2 cut(s)	1142, 1155
AcoI	YGGCCR	1 cut(s)	1201
AcsI	RAATTY	1 cut(s)	212
AcuI	CTGAAG	2 cut(s)	492, 1407
AfaI	GTAC	3 cut(s)	542, 747, 1093
AfiI	CCNNNNNNNGG	2 cut(s)	69, 506
AgsI	TTSAA	9 cut(s)	20, 84, 419, 566, 766, 815, 917, 1546, 1731
AjnI	CCWGG	2 cut(s)	267, 1099
AjuI	GAANNNNNNNTTGG	2 cut(s)	758, 790
AluBI	AGCT	3 cut(s)	878, 977, 1313
AluI	AGCT	3 cut(s)	878, 977, 1313
Alw21I	GWGCWC	1 cut(s)	1483
Alw26I	GTCTC	1 cut(s)	344
AlwI	GGATC	2 cut(s)	1142, 1155
AlwNI	CAGNNNCTG	1 cut(s)	458
AoxI	GGCC	4 cut(s)	296, 1018, 1201, 1359
ApeKI	GCWGC	3 cut(s)	107, 517, 853
ApoI	RAATTY	1 cut(s)	212
AspLEI	GCGC	2 cut(s)	170, 517
AspS9I	GGNCC	3 cut(s)	251, 778, 1583
AsuC2I	CCSGG	1 cut(s)	30
AsuHPI	GGTGA	5 cut(s)	257, 584, 938, 1145, 1816
AvaII	GGWCC	3 cut(s)	251, 778, 1583
BalI	TGGCCA	1 cut(s)	1203
BamHI	GGATCC	1 cut(s)	1147
BauI	CACGAG	1 cut(s)	1570
BbsI	GAAGAC	4 cut(s)	381, 415, 789, 1717
Bbv12I	GWGCWC	1 cut(s)	1483
BbvCI	CCTCAGC	1 cut(s)	1080
BbvI	GCAGC	3 cut(s)	94, 529, 840
BccI	CCATC	5 cut(s)	436, 749, 949, 1571, 1640
BceAI	ACGGC	3 cut(s)	86, 866, 1092
BciT130I	CCWGG	2 cut(s)	269, 1101
BciVI	GTATCC	1 cut(s)	186
BcnI	CCSGG	1 cut(s)	30
BcoDI	GTCTC	1 cut(s)	344
BfaI	CTAG	1 cut(s)	284
BfmI	CTRYAG	2 cut(s)	450, 854
BfuAI	ACCTGC	1 cut(s)	789
BfuI	GTATCC	1 cut(s)	186
BglII	AGATCT	1 cut(s)	359
BisI	GCNGC	3 cut(s)	108, 518, 854
BlsI	GCNGC	3 cut(s)	109, 519, 855
Bme1390I	CCNGG	3 cut(s)	30, 269, 1101
Bme18I	GGWCC	3 cut(s)	251, 778, 1583
BmgT120I	GGNCC	3 cut(s)	251, 778, 1583
BmiI	GGNNCC	2 cut(s)	938, 1149
BmrFI	CCNGG	3 cut(s)	30, 269, 1101
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	5 cut(s)	436, 449, 1363, 1624, 1676
BmuI	ACTGGG	1 cut(s)	1398
BoxI	GACNNNNGTC	1 cut(s)	588
BpiI	GAAGAC	4 cut(s)	381, 415, 789, 1717
BpmI	CTGGAG	1 cut(s)	113
Bpu10I	CCTNAGC	2 cut(s)	1080, 1603
BpuMI	CCSGG	1 cut(s)	30
BsaAI	YACGTR	1 cut(s)	544
BsaJI	CCNNGG	6 cut(s)	254, 1008, 1021, 1099, 1185, 1347
BsaWI	WCCGGW	1 cut(s)	154
BsaXI	ACNNNNNCTCC	6 cut(s)	867, 897, 1281, 1311, 1548, 1578
Bsc4I	CCNNNNNNNGG	2 cut(s)	69, 506
Bse1I	ACTGG	2 cut(s)	130, 1404
BseBI	CCWGG	2 cut(s)	269, 1101
BseDI	CCNNGG	6 cut(s)	254, 1008, 1021, 1099, 1185, 1347
BseGI	GGATG	9 cut(s)	586, 623, 712, 904, 1126, 1195, 1340, 1639, 1691
BseLI	CCNNNNNNNGG	2 cut(s)	69, 506
BseMII	CTCAG	5 cut(s)	171, 255, 360, 515, 1071
BseNI	ACTGG	2 cut(s)	130, 1404
BseRI	GAGGAG	4 cut(s)	491, 875, 1082, 1436
BseXI	GCAGC	3 cut(s)	94, 529, 840
Bsh1236I	CGCG	2 cut(s)	170, 1010
BshFI	GGCC	4 cut(s)	298, 1020, 1203, 1361
BsiHKAI	GWGCWC	1 cut(s)	1483
BsiSI	CCGG	2 cut(s)	30, 155
BsiWI	CGTACG	1 cut(s)	540
BslFI	GGGAC	1 cut(s)	1385
BslI	CCNNNNNNNGG	2 cut(s)	69, 506
BsmAI	GTCTC	1 cut(s)	344
BsmFI	GGGAC	1 cut(s)	1385
BsmI	GAATGC	1 cut(s)	643
BsnI	GGCC	4 cut(s)	298, 1020, 1203, 1361
Bsp1286I	GDGCHC	1 cut(s)	1483
Bsp143I	GATC	5 cut(s)	186, 359, 790, 1147, 1335
BspACI	CCGC	5 cut(s)	972, 1008, 1010, 1060, 1600
BspANI	GGCC	4 cut(s)	298, 1020, 1203, 1361
BspCNI	CTCAG	5 cut(s)	172, 254, 359, 514, 1072
BspFNI	CGCG	2 cut(s)	170, 1010
BspLI	GGNNCC	2 cut(s)	938, 1149
BspMAI	CTGCAG	1 cut(s)	858
BspMI	ACCTGC	1 cut(s)	789
BspPI	GGATC	2 cut(s)	1142, 1155
BsrI	ACTGG	2 cut(s)	130, 1404
BssECI	CCNNGG	6 cut(s)	254, 1008, 1021, 1099, 1185, 1347
BssMI	GATC	5 cut(s)	186, 359, 790, 1147, 1335
BssNAI	GTATAC	1 cut(s)	1789
BssSI	CACGAG	1 cut(s)	1570
BssT1I	CCWWGG	3 cut(s)	1021, 1185, 1347
Bst1107I	GTATAC	1 cut(s)	1789
Bst2BI	CACGAG	1 cut(s)	1570
Bst2UI	CCWGG	2 cut(s)	269, 1101
Bst6I	CTCTTC	3 cut(s)	468, 761, 1323
BstAPI	GCANNNNNTGC	1 cut(s)	446
BstBAI	YACGTR	1 cut(s)	544
BstC8I	GCNNGC	1 cut(s)	1691
BstDEI	CTNAG	9 cut(s)	180, 241, 346, 489, 501, 530, 1080, 1593, 1603
BstDSI	CCRYGG	1 cut(s)	1008
BstENI	CCTNNNNNAGG	1 cut(s)	504
BstF5I	GGATG	9 cut(s)	586, 623, 712, 904, 1126, 1195, 1340, 1639, 1691
BstFNI	CGCG	2 cut(s)	170, 1010
BstHHI	GCGC	2 cut(s)	170, 517
BstKTI	GATC	5 cut(s)	189, 362, 793, 1150, 1338
BstMAI	GTCTC	1 cut(s)	344
BstMBI	GATC	5 cut(s)	186, 359, 790, 1147, 1335
BstMWI	GCNNNNNNNGC	1 cut(s)	446
BstNI	CCWGG	2 cut(s)	269, 1101
BstNSI	RCATGY	3 cut(s)	737, 1479, 1693
BstPAI	GACNNNNGTC	1 cut(s)	588
BstSCI	CCNGG	3 cut(s)	28, 267, 1099
BstSFI	CTRYAG	2 cut(s)	450, 854
BstSNI	TACGTA	1 cut(s)	544
BstUI	CGCG	2 cut(s)	170, 1010
BstV1I	GCAGC	3 cut(s)	94, 529, 840
BstV2I	GAAGAC	4 cut(s)	381, 415, 789, 1717
BstX2I	RGATCY	2 cut(s)	359, 1147
BstXI	CCANNNNNNTGG	2 cut(s)	1286, 1779
BstYI	RGATCY	2 cut(s)	359, 1147
BstZ17I	GTATAC	1 cut(s)	1789
BsuI	GTATCC	1 cut(s)	186
BsuRI	GGCC	4 cut(s)	298, 1020, 1203, 1361
BtgI	CCRYGG	1 cut(s)	1008
BtsCI	GGATG	9 cut(s)	586, 623, 712, 904, 1126, 1195, 1340, 1639, 1691
BtsI	GCAGTG	1 cut(s)	708
BtsIMutI	CAGTG	7 cut(s)	137, 376, 627, 708, 1036, 1411, 1521
BveI	ACCTGC	1 cut(s)	789
Cac8I	GCNNGC	1 cut(s)	1691
CaiI	CAGNNNCTG	1 cut(s)	458
CfoI	GCGC	2 cut(s)	170, 517
Cfr13I	GGNCC	3 cut(s)	251, 778, 1583
Cfr42I	CCGCGG	1 cut(s)	1011
Csp6I	GTAC	3 cut(s)	541, 746, 1092
CviAII	CATG	8 cut(s)	235, 734, 1205, 1286, 1476, 1657, 1690, 1779
CviQI	GTAC	3 cut(s)	541, 746, 1092
DdeI	CTNAG	9 cut(s)	180, 241, 346, 489, 501, 530, 1080, 1593, 1603
DpnI	GATC	5 cut(s)	188, 361, 792, 1149, 1337
DpnII	GATC	5 cut(s)	186, 359, 790, 1147, 1335
EaeI	YGGCCR	1 cut(s)	1201
Eam1104I	CTCTTC	3 cut(s)	468, 761, 1323
EarI	CTCTTC	3 cut(s)	468, 761, 1323
Eco105I	TACGTA	1 cut(s)	544
Eco130I	CCWWGG	3 cut(s)	1021, 1185, 1347
Eco47I	GGWCC	3 cut(s)	251, 778, 1583
Eco57I	CTGAAG	2 cut(s)	492, 1407
EcoNI	CCTNNNNNAGG	1 cut(s)	504
EcoRII	CCWGG	2 cut(s)	267, 1099
EcoT14I	CCWWGG	3 cut(s)	1021, 1185, 1347
EcoT22I	ATGCAT	1 cut(s)	1691
ErhI	CCWWGG	3 cut(s)	1021, 1185, 1347
FaeI	CATG	8 cut(s)	238, 737, 1208, 1289, 1479, 1660, 1693, 1782
FalI	AAGNNNNNCTT	6 cut(s)	795, 827, 1121, 1153, 1586, 1618
FaqI	GGGAC	1 cut(s)	1385
FatI	CATG	8 cut(s)	234, 733, 1204, 1285, 1475, 1656, 1689, 1778
FauI	CCCGC	1 cut(s)	1053
FblI	GTMKAC	2 cut(s)	807, 1788
Fnu4HI	GCNGC	3 cut(s)	108, 518, 854
FokI	GGATG	9 cut(s)	593, 610, 719, 911, 1133, 1202, 1327, 1646, 1698
Fsp4HI	GCNGC	3 cut(s)	108, 518, 854
FspBI	CTAG	1 cut(s)	284
GlaI	GCGC	2 cut(s)	169, 516
GluI	GCNGC	3 cut(s)	108, 518, 854
GsuI	CTGGAG	1 cut(s)	113
HaeIII	GGCC	4 cut(s)	298, 1020, 1203, 1361
HapII	CCGG	2 cut(s)	30, 155
HhaI	GCGC	2 cut(s)	170, 517
Hin1II	CATG	8 cut(s)	238, 737, 1208, 1289, 1479, 1660, 1693, 1782
Hin6I	GCGC	2 cut(s)	168, 515
HinP1I	GCGC	2 cut(s)	168, 515
HincII	GTYRAC	3 cut(s)	367, 667, 1567
HindII	GTYRAC	3 cut(s)	367, 667, 1567
HpaI	GTTAAC	1 cut(s)	367
HpaII	CCGG	2 cut(s)	30, 155
HphI	GGTGA	5 cut(s)	257, 584, 938, 1145, 1816
Hpy188III	TCNNGA	2 cut(s)	179, 308
Hpy99I	CGWCG	1 cut(s)	297
HpyAV	CCTTC	4 cut(s)	505, 691, 1014, 1737
HpyCH4IV	ACGT	2 cut(s)	539, 543
HpyCH4V	TGCA	7 cut(s)	110, 199, 440, 641, 856, 1457, 1689
HpyF10VI	GCNNNNNNNGC	1 cut(s)	446
HpyF3I	CTNAG	9 cut(s)	180, 241, 346, 489, 501, 530, 1080, 1593, 1603
HpySE526I	ACGT	2 cut(s)	539, 543
Hsp92II	CATG	8 cut(s)	238, 737, 1208, 1289, 1479, 1660, 1693, 1782
HspAI	GCGC	2 cut(s)	168, 515
KspAI	GTTAAC	1 cut(s)	367
KspI	CCGCGG	1 cut(s)	1011
Kzo9I	GATC	5 cut(s)	186, 359, 790, 1147, 1335
LmnI	GCTCC	4 cut(s)	875, 974, 1486, 1743
Lsp1109I	GCAGC	3 cut(s)	94, 529, 840
LweI	GCATC	5 cut(s)	436, 449, 1363, 1624, 1676
MaeI	CTAG	1 cut(s)	284
MaeII	ACGT	2 cut(s)	539, 543
MaeIII	GTNAC	3 cut(s)	275, 590, 1133
MalI	GATC	5 cut(s)	188, 361, 792, 1149, 1337
MboI	GATC	5 cut(s)	186, 359, 790, 1147, 1335
MfeI	CAATTG	2 cut(s)	773, 786
MflI	RGATCY	2 cut(s)	359, 1147
MhlI	GDGCHC	1 cut(s)	1483
MlsI	TGGCCA	1 cut(s)	1203
MluCI	AATT	9 cut(s)	15, 212, 597, 726, 773, 786, 912, 1363, 1680
MluNI	TGGCCA	1 cut(s)	1203
MlyI	GAGTC	7 cut(s)	53, 160, 323, 338, 1202, 1562, 1769
MmeI	TCCRAC	1 cut(s)	853
Mox20I	TGGCCA	1 cut(s)	1203
Mph1103I	ATGCAT	1 cut(s)	1691
MscI	TGGCCA	1 cut(s)	1203
MseI	TTAA	6 cut(s)	366, 612, 888, 1505, 1512, 1671
MslI	CAYNNNNRTG	2 cut(s)	83, 738
Msp20I	TGGCCA	1 cut(s)	1203
MspA1I	CMGCKG	1 cut(s)	1010
MspI	CCGG	2 cut(s)	30, 155
MspR9I	CCNGG	3 cut(s)	30, 269, 1101
MunI	CAATTG	2 cut(s)	773, 786
Mva1269I	GAATGC	1 cut(s)	643
MvaI	CCWGG	2 cut(s)	269, 1101
MvnI	CGCG	2 cut(s)	170, 1010
MwoI	GCNNNNNNNGC	1 cut(s)	446
NciI	CCSGG	1 cut(s)	30
NdeII	GATC	5 cut(s)	186, 359, 790, 1147, 1335
NlaIII	CATG	8 cut(s)	238, 737, 1208, 1289, 1479, 1660, 1693, 1782
NlaIV	GGNNCC	2 cut(s)	938, 1149
NmuCI	GTSAC	2 cut(s)	590, 1133
NsiI	ATGCAT	1 cut(s)	1691
NspI	RCATGY	3 cut(s)	737, 1479, 1693
PaeI	GCATGC	1 cut(s)	1693
PctI	GAATGC	1 cut(s)	643
PfeI	GAWTC	5 cut(s)	320, 455, 461, 554, 722
Pfl23II	CGTACG	1 cut(s)	540
PkrI	GCNGC	3 cut(s)	109, 519, 855
PleI	GAGTC	7 cut(s)	53, 159, 322, 338, 1202, 1562, 1769
PpsI	GAGTC	7 cut(s)	53, 159, 322, 338, 1202, 1562, 1769
Ppu21I	YACGTR	1 cut(s)	544
PshAI	GACNNNNGTC	1 cut(s)	588
Psp6I	CCWGG	2 cut(s)	267, 1099
PspGI	CCWGG	2 cut(s)	267, 1099
PspLI	CGTACG	1 cut(s)	540
PspN4I	GGNNCC	2 cut(s)	938, 1149
PspPI	GGNCC	3 cut(s)	251, 778, 1583
PsrI	GAACNNNNNNTAC	2 cut(s)	667, 699
PstI	CTGCAG	1 cut(s)	858
PstNI	CAGNNNCTG	1 cut(s)	458
PsuI	RGATCY	2 cut(s)	359, 1147
RsaI	GTAC	3 cut(s)	542, 747, 1093
RsaNI	GTAC	3 cut(s)	541, 746, 1092
RseI	CAYNNNNRTG	2 cut(s)	83, 738
SacII	CCGCGG	1 cut(s)	1011
SaqAI	TTAA	6 cut(s)	366, 612, 888, 1505, 1512, 1671
SatI	GCNGC	3 cut(s)	108, 518, 854
Sau3AI	GATC	5 cut(s)	186, 359, 790, 1147, 1335
Sau96I	GGNCC	3 cut(s)	251, 778, 1583
SchI	GAGTC	7 cut(s)	53, 160, 323, 338, 1202, 1562, 1769
ScrFI	CCNGG	3 cut(s)	30, 269, 1101
SduI	GDGCHC	1 cut(s)	1483
SfaNI	GCATC	5 cut(s)	436, 449, 1363, 1624, 1676
SfcI	CTRYAG	2 cut(s)	450, 854
Sfr303I	CCGCGG	1 cut(s)	1011
SgrBI	CCGCGG	1 cut(s)	1011
SinI	GGWCC	3 cut(s)	251, 778, 1583
SmiMI	CAYNNNNRTG	2 cut(s)	83, 738
SnaBI	TACGTA	1 cut(s)	544
SphI	GCATGC	1 cut(s)	1693
Sse9I	AATT	9 cut(s)	15, 212, 597, 726, 773, 786, 912, 1363, 1680
SsiI	CCGC	5 cut(s)	972, 1008, 1010, 1060, 1600
SspMI	CTAG	1 cut(s)	284
StyD4I	CCNGG	3 cut(s)	28, 267, 1099
StyI	CCWWGG	3 cut(s)	1021, 1185, 1347
TaiI	ACGT	2 cut(s)	542, 546
TaqI	TCGA	2 cut(s)	189, 1371
TasI	AATT	9 cut(s)	15, 212, 597, 726, 773, 786, 912, 1363, 1680
TatI	WGTACW	2 cut(s)	745, 1091
TfiI	GAWTC	5 cut(s)	320, 455, 461, 554, 722
Tru1I	TTAA	6 cut(s)	366, 612, 888, 1505, 1512, 1671
Tru9I	TTAA	6 cut(s)	366, 612, 888, 1505, 1512, 1671
TscAI	CASTG	7 cut(s)	137, 376, 634, 708, 1036, 1411, 1528
TseFI	GTSAC	2 cut(s)	590, 1133
TseI	GCWGC	3 cut(s)	107, 517, 853
Tsp45I	GTSAC	2 cut(s)	590, 1133
TspDTI	ATGAA	5 cut(s)	243, 915, 1242, 1251, 1517
TspGWI	ACGGA	1 cut(s)	1578
TspRI	CASTG	7 cut(s)	137, 376, 634, 708, 1036, 1411, 1528
VpaK11BI	GGWCC	3 cut(s)	251, 778, 1583
XagI	CCTNNNNNAGG	1 cut(s)	504
XapI	RAATTY	1 cut(s)	212
XceI	RCATGY	3 cut(s)	737, 1479, 1693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1776
XmiI	GTMKAC	2 cut(s)	807, 1788
XspI	CTAG	1 cut(s)	284
Zsp2I	ATGCAT	1 cut(s)	1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.