pycom16g26260

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
28606066 .. 28610855
4790 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g26260.9

Sequence Viewer

Length: 2166 bp
ATGGCTTTCTGGGGAGTCGAAGTGAAACCCGGAAATCCTTTCACTCACATATTTGATGGCGTGAAGGGACGCCTTCACGTTTCAATGGCCACACTGGGGAATGGGACTGCGACGAAAAAAAGCACACTTCAGTGTAATGTGGGAAACAAGAGTCCTGTATATCTATGCTCCTTGTTTCCTGAGAAGGCTGAGTCATTGCAAATAAATGTGGAGTTTGAAGAGTGTGAGGAAGTCATCTTCTCAGTTCTTGGCCCTCGGAGTGTTCACCTATCTGGCCACTATCTTCCTCGTCATCAACATCACAATTTTGATGATGATAATTCAGAATCTTATGGGGAAGATATTGCTAATTCTGAAACCAAGATGTCTGTTGATAGTGAAGAAGACAAGTATGAAGATAGTTTTATTAATGACGAGGACCCAAAAGTCTTCCCAGCTTCTCCTGTTCTTGATAGTGAAGAGGAGCTTTTGGATGAGCATAAACCTCATAATGGCAAGGGCCATCGAAGACGACTTCGGAAGATGTACCAAGTGAGTGAGTCCGAAGTGGAGGGTGAAGATGATGACAGATGCCTAACTTCCTCTTTGTACAAGACAAAATCCGGTACTAGAAACACAACAGAGGAAGTTGAAGAAAAAGTTGGCAAGAGAGCCGTAGATACCACTACTAGCAATGAAACAGAGGATGGTGTCTTTAATGCTACTGAAACAATGAATGATGCTGATGATGTGGATGTAGATGGTCAGTTGAAAAGGCGATTTGACCTGCCAGTAGATACCTTCCTACCTTCTTCTGAAGAAGGCCTTGAAATTGGTGGAACACCAAAGAAAAATAGGAAAGAATGGCCGGATGATAAAGCACTTGAATATGGTTTTCGTGAAAAAGAGGACAAAGCCCAAAATGTTGAAATCAAGGTTGAAAGTAGGACCCAAAATTTGTGTGTGGAGGATGGACAAGAACAGAGGGTGGCCAATCATATCGCACTTGAAGGGCTAGATGATTTTTCAAGGCATTCAACAGAGGTCAACCTTGAAAATTGTGGAAAACTGAAGAAAAAAAGGAAAGAGCGGCCAGAGGATACAGCACTTAAAGCTGGTATCCTTGAAAAGGAGGATGAAAAAGCCAAGAAAGATGACACCAGAGCCAAAAATAGGATCCAAAATTTTTGTGTGGAGGATGGACAAGAACAGATGGTGGCCAACCATATCCGTGCACCTGAAGGGCCAGATGATTTCCCAAAGCCTTCAACAGAGGTCAACCTTGAAAATGGTGGAAAGCTGAAGAAAAAATGGAAAGAACGGCCGAAGGATAAAGCATTTGAAAAGGTGGACGAAGCCCAGAAAGATGACACTAGAGCCCAAATACAGACCCAAATTTTGTGCGTTGTAGACCGACAAGAACAGAAGGTGGCCAAACATATTGTACCTGAGGGGCCAGATGATTTGTCAAAGCCCACAGTAGAGGTCAACCTTGAAAATGGTGAAAGGCCAAAGAAGAAAAGGAAGAAGCGTGAGGAGGGGAAAATATTGGAGATTGTCTGCACTAACCTTGATGATGTTGTTAAAGAGGATAAAGGGCAGCAGGATGAGGCAAAGGGTGGCATCTGCCCAGATCTACCTGTGAGGAGTGAGCAAAATCAGCAGTCAGCCAAGGATGGCAATTCTGGCCATGATTCTGGTAGATTTGTTGATGGTCAATCTGATGAAAAGAAAGTTAAAAAGAAGAAGAAGAAAAGTAAAACTGAAGCACATGAGGTAGCTGAGAACACGGATGTGCCTCTCTTGTCAGCAGAAGATAATGCTAATGCCAAGTCATCTCAAGTTAAGACCTTCCCAAGTGGATTAAGTATTGAGGAGTTAGAAGCTGGAAAACCGGATGGCAAAGTTGCCACATCGGGGAAAAAGATAAGTGTTCACTATGTAGGCAAGTTGAAAGAGAATGGCAAGGTAATCGACTCCACTGACGGCAGTGCTCCTTACAGGTTTCGCTTAGGCAAAGGAGAAGTTATAGATGGTTGGGATGTTGGCATTGATGGTATGCGAGTTGGTGAAAAAAGAAGACTTGTTATACCTCCGTCATTGGCCTATGGGAGTAGAGGAGATGGTGCAGGTATACCACCAAACTCATGGCTGGAATATGATGTTGAATTAGTGAAAGCTCATTAA

Protein Analysis

722

Amino Acids

80.6

Weight (kDa)

5.28

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 425
Acc36I ACCTGC 2 cut(s) 774, 2099
AccBSI CCGCTC 1 cut(s) 1069
AccI GTMKAC 2 cut(s) 1389, 2113
AciI CCGC 1 cut(s) 1069
AclWI GGATC 2 cut(s) 1150, 1163
AcoI YGGCCR 9 cut(s) 87, 274, 845, 969, 1070, 1197, 1301, 1410, 1666
AcsI RAATTY 3 cut(s) 934, 1162, 1374
AcuI CTGAAG 6 cut(s) 113, 816, 1070, 1239, 1301, 1764
AcyI GRCGYC 1 cut(s) 70
AfaI GTAC 4 cut(s) 527, 590, 607, 1425
AfiI CCNNNNNNNGG 5 cut(s) 96, 491, 1108, 1152, 1896
AjuI GAANNNNNNNTTGG 2 cut(s) 624, 656
AleI CACNNNNGTG 2 cut(s) 130, 1772
AluBI AGCT 7 cut(s) 437, 466, 1094, 1279, 1760, 1865, 2159
AluI AGCT 7 cut(s) 437, 466, 1094, 1279, 1760, 1865, 2159
Alw21I GWGCWC 2 cut(s) 1216, 1975
Alw44I GTGCAC 1 cut(s) 1212
AlwI GGATC 2 cut(s) 1150, 1163
ApaLI GTGCAC 1 cut(s) 1212
ApeKI GCWGC 1 cut(s) 1579
ApoI RAATTY 3 cut(s) 934, 1162, 1374
ArsI GACNNNNNNTTYG 4 cut(s) 919, 951, 1360, 1392
AseI ATTAAT 1 cut(s) 408
AspS9I GGNCC 6 cut(s) 251, 418, 499, 927, 1223, 1433
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 4 cut(s) 257, 566, 1493, 2060
AvaII GGWCC 2 cut(s) 418, 927
AxyI CCTNAGG 1 cut(s) 1428
BaeGI GKGCMC 1 cut(s) 1216
BalI TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
BamHI GGATCC 1 cut(s) 1155
BanII GRGCYC 1 cut(s) 1360
BbsI GAAGAC 4 cut(s) 390, 421, 514, 2065
Bbv12I GWGCWC 2 cut(s) 1216, 1975
BbvI GCAGC 1 cut(s) 1591
BceAI ACGGC 3 cut(s) 638, 1316, 1981
BcgI CGANNNNNNTGC 2 cut(s) 1933, 1967
BciVI GTATCC 2 cut(s) 1072, 1109
BcnI CCSGG 1 cut(s) 30
BfaI CTAG 4 cut(s) 609, 669, 995, 1353
BfuAI ACCTGC 2 cut(s) 774, 2099
BfuI GTATCC 2 cut(s) 1072, 1109
BglII AGATCT 1 cut(s) 1612
BisI GCNGC 2 cut(s) 1070, 1580
BlsI GCNGC 2 cut(s) 1071, 1581
Bme1390I CCNGG 1 cut(s) 30
Bme18I GGWCC 2 cut(s) 418, 927
BmgT120I GGNCC 6 cut(s) 251, 418, 499, 927, 1223, 1433
BmiI GGNNCC 4 cut(s) 420, 929, 1157, 1434
BmrFI CCNGG 1 cut(s) 30
BmrI ACTGGG 1 cut(s) 104
BmsI GCATC 3 cut(s) 560, 709, 1611
BmuI ACTGGG 1 cut(s) 104
BpiI GAAGAC 4 cut(s) 390, 421, 514, 2065
Bpu10I CCTNAGC 1 cut(s) 1990
BpuEI CTTGAG 1 cut(s) 1803
BpuMI CCSGG 1 cut(s) 30
BsaHI GRCGYC 1 cut(s) 70
BsaJI CCNNGG 2 cut(s) 254, 1650
BsaWI WCCGGW 2 cut(s) 602, 1873
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 5 cut(s) 96, 491, 1108, 1152, 1896
Bse1I ACTGG 2 cut(s) 99, 770
Bse21I CCTNAGG 1 cut(s) 1428
Bse3DI GCAATG 2 cut(s) 194, 679
BseDI CCNNGG 2 cut(s) 254, 1650
BseLI CCNNNNNNNGG 5 cut(s) 96, 491, 1108, 1152, 1896
BseMI GCAATG 2 cut(s) 194, 679
BseMII CTCAG 5 cut(s) 171, 180, 255, 1419, 1752
BseNI ACTGG 2 cut(s) 99, 770
BseRI GAGGAG 5 cut(s) 476, 1529, 1639, 1868, 2112
BseSI GKGCMC 1 cut(s) 1216
BseX3I CGGCCG 1 cut(s) 1301
BseXI GCAGC 1 cut(s) 1591
BseYI CCCAGC 1 cut(s) 433
BsgI GTGCAG 2 cut(s) 1525, 2127
Bsh1285I CGRYCG 1 cut(s) 1304
BsiEI CGRYCG 1 cut(s) 1304
BsiHKAI GWGCWC 2 cut(s) 1216, 1975
BsiSI CCGG 4 cut(s) 30, 603, 848, 1874
BslFI GGGAC 2 cut(s) 81, 118
BslI CCNNNNNNNGG 5 cut(s) 96, 491, 1108, 1152, 1896
BsmFI GGGAC 2 cut(s) 81, 118
BsmI GAATGC 1 cut(s) 1012
Bsp1286I GDGCHC 3 cut(s) 1216, 1360, 1975
Bsp1407I TGTACA 1 cut(s) 588
Bsp143I GATC 2 cut(s) 1155, 1612
BspACI CCGC 1 cut(s) 1069
BspCNI CTCAG 5 cut(s) 172, 181, 254, 1420, 1753
BspLI GGNNCC 4 cut(s) 420, 929, 1157, 1434
BspMI ACCTGC 2 cut(s) 774, 2099
BspPI GGATC 2 cut(s) 1150, 1163
BsrBI CCGCTC 1 cut(s) 1069
BsrDI GCAATG 2 cut(s) 194, 679
BsrGI TGTACA 1 cut(s) 588
BsrI ACTGG 2 cut(s) 99, 770
BssECI CCNNGG 2 cut(s) 254, 1650
BssMI GATC 2 cut(s) 1155, 1612
BssNAI GTATAC 1 cut(s) 2114
BssNI GRCGYC 1 cut(s) 70
BssT1I CCWWGG 1 cut(s) 1650
Bst1107I GTATAC 1 cut(s) 2114
Bst4CI ACNGT 1 cut(s) 1459
Bst6I CTCTTC 2 cut(s) 213, 453
BstACI GRCGYC 1 cut(s) 70
BstAUI TGTACA 1 cut(s) 588
BstDEI CTNAG 6 cut(s) 180, 189, 241, 1428, 1761, 1990
BstENI CCTNNNNNAGG 1 cut(s) 1106
BstKTI GATC 2 cut(s) 1158, 1615
BstMBI GATC 2 cut(s) 1155, 1612
BstMCI CGRYCG 1 cut(s) 1304
BstMWI GCNNNNNNNGC 3 cut(s) 1091, 1639, 1665
BstSCI CCNGG 1 cut(s) 28
BstSLI GKGCMC 1 cut(s) 1216
BstV1I GCAGC 1 cut(s) 1591
BstV2I GAAGAC 4 cut(s) 390, 421, 514, 2065
BstX2I RGATCY 2 cut(s) 1155, 1612
BstXI CCANNNNNNTGG 2 cut(s) 1676, 2127
BstYI RGATCY 2 cut(s) 1155, 1612
BstZ17I GTATAC 1 cut(s) 2114
BstZI CGGCCG 1 cut(s) 1301
Bsu36I CCTNAGG 1 cut(s) 1428
BsuI GTATCC 2 cut(s) 1072, 1109
BtsI GCAGTG 1 cut(s) 1975
BtsIMutI CAGTG 4 cut(s) 92, 137, 1959, 1975
BveI ACCTGC 2 cut(s) 774, 2099
Cfr13I GGNCC 6 cut(s) 251, 418, 499, 927, 1223, 1433
CseI GACGC 1 cut(s) 78
Csp6I GTAC 4 cut(s) 526, 589, 606, 1424
CviAII CATG 3 cut(s) 1670, 1751, 2127
CviQI GTAC 4 cut(s) 526, 589, 606, 1424
DdeI CTNAG 6 cut(s) 180, 189, 241, 1428, 1761, 1990
DpnI GATC 2 cut(s) 1157, 1614
DpnII GATC 2 cut(s) 1155, 1612
DrdI GACNNNNNNGTC 1 cut(s) 425
DseDI GACNNNNNNGTC 1 cut(s) 425
EaeI YGGCCR 9 cut(s) 87, 274, 845, 969, 1070, 1197, 1301, 1410, 1666
EagI CGGCCG 1 cut(s) 1301
Eam1104I CTCTTC 2 cut(s) 213, 453
EarI CTCTTC 2 cut(s) 213, 453
EclXI CGGCCG 1 cut(s) 1301
Eco130I CCWWGG 1 cut(s) 1650
Eco147I AGGCCT 1 cut(s) 804
Eco24I GRGCYC 1 cut(s) 1360
Eco47I GGWCC 2 cut(s) 418, 927
Eco52I CGGCCG 1 cut(s) 1301
Eco57I CTGAAG 6 cut(s) 113, 816, 1070, 1239, 1301, 1764
Eco81I CCTNAGG 1 cut(s) 1428
EcoNI CCTNNNNNAGG 1 cut(s) 1106
EcoO109I RGGNCCY 2 cut(s) 418, 927
EcoT14I CCWWGG 1 cut(s) 1650
EcoT38I GRGCYC 1 cut(s) 1360
ErhI CCWWGG 1 cut(s) 1650
FaeI CATG 3 cut(s) 1673, 1754, 2130
FalI AAGNNNNNCTT 4 cut(s) 450, 482, 789, 821
FaqI GGGAC 2 cut(s) 81, 118
FatI CATG 3 cut(s) 1669, 1750, 2126
FblI GTMKAC 2 cut(s) 1389, 2113
Fnu4HI GCNGC 2 cut(s) 1070, 1580
FriOI GRGCYC 1 cut(s) 1360
Fsp4HI GCNGC 2 cut(s) 1070, 1580
FspBI CTAG 4 cut(s) 609, 669, 995, 1353
GluI GCNGC 2 cut(s) 1070, 1580
GsaI CCCAGC 1 cut(s) 437
HapII CCGG 4 cut(s) 30, 603, 848, 1874
HgaI GACGC 1 cut(s) 78
Hin1I GRCGYC 1 cut(s) 70
Hin1II CATG 3 cut(s) 1673, 1754, 2130
HincII GTYRAC 3 cut(s) 1027, 1258, 1468
HindII GTYRAC 3 cut(s) 1027, 1258, 1468
HinfI GANTC 7 cut(s) 15, 151, 191, 326, 539, 1673, 1955
HpaII CCGG 4 cut(s) 30, 603, 848, 1874
HphI GGTGA 4 cut(s) 257, 566, 1493, 2060
Hpy166II GTNNAC 9 cut(s) 265, 1027, 1214, 1258, 1330, 1390, 1468, 1915, 2114
Hpy188I TCNGA 7 cut(s) 258, 325, 355, 519, 544, 796, 1702
Hpy188III TCNNGA 3 cut(s) 179, 449, 878
Hpy8I GTNNAC 9 cut(s) 265, 1027, 1214, 1258, 1330, 1390, 1468, 1915, 2114
Hpy99I CGWCG 1 cut(s) 115
HpyCH4III ACNGT 1 cut(s) 1459
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 4 cut(s) 199, 1214, 1542, 2108
HpyF10VI GCNNNNNNNGC 3 cut(s) 1091, 1639, 1665
HpyF3I CTNAG 6 cut(s) 180, 189, 241, 1428, 1761, 1990
HpySE526I ACGT 1 cut(s) 78
Hsp92I GRCGYC 1 cut(s) 70
Hsp92II CATG 3 cut(s) 1673, 1754, 2130
Kzo9I GATC 2 cut(s) 1155, 1612
LmnI GCTCC 3 cut(s) 173, 463, 1978
Lsp1109I GCAGC 1 cut(s) 1591
LweI GCATC 3 cut(s) 560, 709, 1611
MaeI CTAG 4 cut(s) 609, 669, 995, 1353
MaeII ACGT 1 cut(s) 78
MalI GATC 2 cut(s) 1157, 1614
MbiI CCGCTC 1 cut(s) 1069
MboI GATC 2 cut(s) 1155, 1612
MflI RGATCY 2 cut(s) 1155, 1612
MhlI GDGCHC 3 cut(s) 1216, 1360, 1975
MlsI TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
MluNI TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
MlyI GAGTC 5 cut(s) 24, 160, 200, 548, 1949
Mox20I TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
MscI TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
MseI TTAA 8 cut(s) 408, 696, 1089, 1563, 1716, 1824, 1844, 2164
MslI CAYNNNNRTG 3 cut(s) 130, 1209, 1772
Msp20I TGGCCA 6 cut(s) 89, 276, 971, 1199, 1412, 1668
MspI CCGG 4 cut(s) 30, 603, 848, 1874
MspR9I CCNGG 1 cut(s) 30
Mva1269I GAATGC 1 cut(s) 1012
MwoI GCNNNNNNNGC 3 cut(s) 1091, 1639, 1665
NciI CCSGG 1 cut(s) 30
NdeII GATC 2 cut(s) 1155, 1612
NlaIII CATG 3 cut(s) 1673, 1754, 2130
NlaIV GGNNCC 4 cut(s) 420, 929, 1157, 1434
OliI CACNNNNGTG 2 cut(s) 130, 1772
PceI AGGCCT 1 cut(s) 804
PctI GAATGC 1 cut(s) 1012
PfeI GAWTC 2 cut(s) 326, 1673
PkrI GCNGC 2 cut(s) 1071, 1581
PleI GAGTC 5 cut(s) 23, 159, 199, 547, 1949
PpsI GAGTC 5 cut(s) 23, 159, 199, 547, 1949
PpuMI RGGWCCY 2 cut(s) 418, 927
PshBI ATTAAT 1 cut(s) 408
Psp5II RGGWCCY 2 cut(s) 418, 927
PspFI CCCAGC 1 cut(s) 433
PspN4I GGNNCC 4 cut(s) 420, 929, 1157, 1434
PspPI GGNCC 6 cut(s) 251, 418, 499, 927, 1223, 1433
PspPPI RGGWCCY 2 cut(s) 418, 927
PsuI RGATCY 2 cut(s) 1155, 1612
RsaI GTAC 4 cut(s) 527, 590, 607, 1425
RsaNI GTAC 4 cut(s) 526, 589, 606, 1424
RseI CAYNNNNRTG 3 cut(s) 130, 1209, 1772
SaqAI TTAA 8 cut(s) 408, 696, 1089, 1563, 1716, 1824, 1844, 2164
SatI GCNGC 2 cut(s) 1070, 1580
Sau3AI GATC 2 cut(s) 1155, 1612
Sau96I GGNCC 6 cut(s) 251, 418, 499, 927, 1223, 1433
SchI GAGTC 5 cut(s) 24, 160, 200, 548, 1949
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 3 cut(s) 1216, 1360, 1975
SfaNI GCATC 3 cut(s) 560, 709, 1611
SinI GGWCC 2 cut(s) 418, 927
SmiMI CAYNNNNRTG 3 cut(s) 130, 1209, 1772
SmlI CTYRAG 1 cut(s) 1818
SmoI CTYRAG 1 cut(s) 1818
SseBI AGGCCT 1 cut(s) 804
SsiI CCGC 1 cut(s) 1069
SspI AATATT 1 cut(s) 1527
SspMI CTAG 4 cut(s) 609, 669, 995, 1353
StuI AGGCCT 1 cut(s) 804
StyD4I CCNGG 1 cut(s) 28
StyI CCWWGG 1 cut(s) 1650
TaaI ACNGT 1 cut(s) 1459
TaiI ACGT 1 cut(s) 81
TaqI TCGA 3 cut(s) 18, 505, 1953
TaqII GACCGA 1 cut(s) 1407
TatI WGTACW 1 cut(s) 588
TauI GCSGC 1 cut(s) 1072
TfiI GAWTC 2 cut(s) 326, 1673
Tru1I TTAA 8 cut(s) 408, 696, 1089, 1563, 1716, 1824, 1844, 2164
Tru9I TTAA 8 cut(s) 408, 696, 1089, 1563, 1716, 1824, 1844, 2164
TscAI CASTG 4 cut(s) 99, 137, 1966, 1975
TseI GCWGC 1 cut(s) 1579
TspDTI ATGAA 5 cut(s) 408, 690, 728, 1131, 1719
TspGWI ACGGA 3 cut(s) 1199, 1784, 2064
TspRI CASTG 4 cut(s) 99, 137, 1966, 1975
VneI GTGCAC 1 cut(s) 1212
VpaK11BI GGWCC 2 cut(s) 418, 927
VspI ATTAAT 1 cut(s) 408
XagI CCTNNNNNAGG 1 cut(s) 1106
XapI RAATTY 3 cut(s) 934, 1162, 1374
XcmI CCANNNNNNNNNTGG 1 cut(s) 2124
XmiI GTMKAC 2 cut(s) 1389, 2113
XspI CTAG 4 cut(s) 609, 669, 995, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.