Peptidyl-prolyl cis-trans isomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12340 AT3G12340 AT3G12340 |
| fragaria_vesca | FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 FvH4_7g11890 |
| malus_domestica | MD00G1063900.v1.1 |
| prunus_persica | Prupe.2G145400_v2.0.a1 |
| pyrus_communis | pycom16g26260 |
| rosa_chinensis | RchiOBHm_Chr1g0350561 |
| rosa_laevigata | RLG00000028473 |
| rosa_multiflora | Rmu_co8266255.1_g000001 Rmu_sc0009041.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00304730 |
| rosa_rugosa | Rorug01G0212200 |
| rosa_samantha | Rh1AG226700 Rh1BG195400 Rh1CG211500 Rh1DG223400 |
| rosa_wichuraiana | Rw1G019590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 822, 1719 |
| AccII | CGCG | 3 cut(s) | 170, 499, 1028 |
| AciI | CCGC | 5 cut(s) | 499, 1026, 1028, 1078, 1570 |
| AclWI | GGATC | 2 cut(s) | 1160, 1173 |
| AcoI | YGGCCR | 1 cut(s) | 1219 |
| AcsI | RAATTY | 1 cut(s) | 212 |
| AcuI | CTGAAG | 2 cut(s) | 113, 1422 |
| AfaI | GTAC | 3 cut(s) | 524, 729, 1111 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 69 |
| AflIII | ACRYGT | 1 cut(s) | 1300 |
| AgsI | TTSAA | 9 cut(s) | 20, 84, 422, 548, 748, 830, 890, 1516, 1662 |
| AjnI | CCWGG | 2 cut(s) | 267, 1117 |
| AluBI | AGCT | 4 cut(s) | 893, 995, 1097, 1328 |
| AluI | AGCT | 4 cut(s) | 893, 995, 1097, 1328 |
| Alw26I | GTCTC | 1 cut(s) | 344 |
| AlwI | GGATC | 2 cut(s) | 1160, 1173 |
| AoxI | GGCC | 4 cut(s) | 296, 1036, 1219, 1374 |
| ApeKI | GCWGC | 2 cut(s) | 107, 868 |
| ApoI | RAATTY | 1 cut(s) | 212 |
| AspLEI | GCGC | 1 cut(s) | 170 |
| AspS9I | GGNCC | 3 cut(s) | 251, 794, 1553 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 4 cut(s) | 257, 566, 1163, 1747 |
| AvaII | GGWCC | 3 cut(s) | 251, 794, 1553 |
| BalI | TGGCCA | 1 cut(s) | 1221 |
| BamHI | GGATCC | 1 cut(s) | 1165 |
| BbsI | GAAGAC | 5 cut(s) | 381, 418, 500, 804, 1648 |
| BbvCI | CCTCAGC | 1 cut(s) | 1098 |
| BbvI | GCAGC | 2 cut(s) | 94, 855 |
| BccI | CCATC | 4 cut(s) | 439, 731, 1541, 1610 |
| BceAI | ACGGC | 2 cut(s) | 86, 881 |
| BciT130I | CCWGG | 2 cut(s) | 269, 1119 |
| BciVI | GTATCC | 1 cut(s) | 186 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BcoDI | GTCTC | 1 cut(s) | 344 |
| BfaI | CTAG | 1 cut(s) | 284 |
| BfmI | CTRYAG | 2 cut(s) | 453, 869 |
| BfuI | GTATCC | 1 cut(s) | 186 |
| BglII | AGATCT | 1 cut(s) | 359 |
| BisI | GCNGC | 3 cut(s) | 108, 500, 869 |
| BlsI | GCNGC | 3 cut(s) | 109, 501, 870 |
| Bme1390I | CCNGG | 3 cut(s) | 30, 269, 1119 |
| Bme18I | GGWCC | 3 cut(s) | 251, 794, 1553 |
| BmgT120I | GGNCC | 3 cut(s) | 251, 794, 1553 |
| BmiI | GGNNCC | 1 cut(s) | 1167 |
| BmrFI | CCNGG | 3 cut(s) | 30, 269, 1119 |
| BmrI | ACTGGG | 1 cut(s) | 1413 |
| BmsI | GCATC | 5 cut(s) | 439, 452, 960, 1378, 1594 |
| BmuI | ACTGGG | 1 cut(s) | 1413 |
| BoxI | GACNNNNGTC | 1 cut(s) | 570 |
| BpiI | GAAGAC | 5 cut(s) | 381, 418, 500, 804, 1648 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1098, 1573 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| BsaAI | YACGTR | 1 cut(s) | 526 |
| BsaBI | GATNNNNATC | 1 cut(s) | 414 |
| BsaJI | CCNNGG | 6 cut(s) | 254, 1026, 1039, 1117, 1203, 1362 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1518, 1548 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 69 |
| Bse1I | ACTGG | 2 cut(s) | 974, 1419 |
| Bse8I | GATNNNNATC | 1 cut(s) | 414 |
| BseBI | CCWGG | 2 cut(s) | 269, 1119 |
| BseDI | CCNNGG | 6 cut(s) | 254, 1026, 1039, 1117, 1203, 1362 |
| BseGI | GGATG | 7 cut(s) | 568, 605, 694, 919, 1144, 1213, 1609 |
| BseJI | GATNNNNATC | 1 cut(s) | 414 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseMII | CTCAG | 5 cut(s) | 171, 255, 360, 497, 1089 |
| BseNI | ACTGG | 2 cut(s) | 974, 1419 |
| BseRI | GAGGAG | 4 cut(s) | 473, 890, 1100, 1451 |
| BseXI | GCAGC | 2 cut(s) | 94, 855 |
| Bsh1236I | CGCG | 3 cut(s) | 170, 499, 1028 |
| BshFI | GGCC | 4 cut(s) | 298, 1038, 1221, 1376 |
| BsiSI | CCGG | 3 cut(s) | 30, 155, 1004 |
| BsiWI | CGTACG | 1 cut(s) | 522 |
| BslFI | GGGAC | 1 cut(s) | 1400 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 1 cut(s) | 344 |
| BsmFI | GGGAC | 1 cut(s) | 1400 |
| BsmI | GAATGC | 2 cut(s) | 625, 790 |
| BsnI | GGCC | 4 cut(s) | 298, 1038, 1221, 1376 |
| Bsp143I | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| BspACI | CCGC | 5 cut(s) | 499, 1026, 1028, 1078, 1570 |
| BspANI | GGCC | 4 cut(s) | 298, 1038, 1221, 1376 |
| BspCNI | CTCAG | 5 cut(s) | 172, 254, 359, 496, 1090 |
| BspFNI | CGCG | 3 cut(s) | 170, 499, 1028 |
| BspLI | GGNNCC | 1 cut(s) | 1167 |
| BspMAI | CTGCAG | 1 cut(s) | 873 |
| BspPI | GGATC | 2 cut(s) | 1160, 1173 |
| BsrI | ACTGG | 2 cut(s) | 974, 1419 |
| BssECI | CCNNGG | 6 cut(s) | 254, 1026, 1039, 1117, 1203, 1362 |
| BssMI | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| BssNAI | GTATAC | 1 cut(s) | 1720 |
| BssT1I | CCWWGG | 2 cut(s) | 1039, 1203 |
| Bst1107I | GTATAC | 1 cut(s) | 1720 |
| Bst2UI | CCWGG | 2 cut(s) | 269, 1119 |
| Bst6I | CTCTTC | 2 cut(s) | 743, 1338 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 449 |
| BstBAI | YACGTR | 1 cut(s) | 526 |
| BstDEI | CTNAG | 9 cut(s) | 180, 241, 346, 471, 483, 512, 1098, 1563, 1573 |
| BstDSI | CCRYGG | 2 cut(s) | 1026, 1362 |
| BstF5I | GGATG | 7 cut(s) | 568, 605, 694, 919, 1144, 1213, 1609 |
| BstFNI | CGCG | 3 cut(s) | 170, 499, 1028 |
| BstHHI | GCGC | 1 cut(s) | 170 |
| BstKTI | GATC | 6 cut(s) | 189, 362, 418, 808, 1168, 1491 |
| BstMAI | GTCTC | 1 cut(s) | 344 |
| BstMBI | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 449 |
| BstNI | CCWGG | 2 cut(s) | 269, 1119 |
| BstNSI | RCATGY | 2 cut(s) | 719, 1304 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 570 |
| BstSCI | CCNGG | 3 cut(s) | 28, 267, 1117 |
| BstSFI | CTRYAG | 2 cut(s) | 453, 869 |
| BstSNI | TACGTA | 1 cut(s) | 526 |
| BstUI | CGCG | 3 cut(s) | 170, 499, 1028 |
| BstV1I | GCAGC | 2 cut(s) | 94, 855 |
| BstV2I | GAAGAC | 5 cut(s) | 381, 418, 500, 804, 1648 |
| BstX2I | RGATCY | 2 cut(s) | 359, 1165 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 989, 1710 |
| BstYI | RGATCY | 2 cut(s) | 359, 1165 |
| BstZ17I | GTATAC | 1 cut(s) | 1720 |
| BsuI | GTATCC | 1 cut(s) | 186 |
| BsuRI | GGCC | 4 cut(s) | 298, 1038, 1221, 1376 |
| BtgI | CCRYGG | 2 cut(s) | 1026, 1362 |
| BtsCI | GGATG | 7 cut(s) | 568, 605, 694, 919, 1144, 1213, 1609 |
| BtsI | GCAGTG | 2 cut(s) | 690, 994 |
| BtsIMutI | CAGTG | 9 cut(s) | 137, 376, 609, 690, 994, 1054, 1426, 1491, 1744 |
| CfoI | GCGC | 1 cut(s) | 170 |
| Cfr13I | GGNCC | 3 cut(s) | 251, 794, 1553 |
| Cfr42I | CCGCGG | 1 cut(s) | 1029 |
| CseI | GACGC | 1 cut(s) | 505 |
| Csp6I | GTAC | 3 cut(s) | 523, 728, 1110 |
| CviAII | CATG | 6 cut(s) | 235, 716, 1223, 1301, 1542, 1710 |
| CviQI | GTAC | 3 cut(s) | 523, 728, 1110 |
| DdeI | CTNAG | 9 cut(s) | 180, 241, 346, 471, 483, 512, 1098, 1563, 1573 |
| DpnI | GATC | 6 cut(s) | 188, 361, 417, 807, 1167, 1490 |
| DpnII | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| EaeI | YGGCCR | 1 cut(s) | 1219 |
| Eam1104I | CTCTTC | 2 cut(s) | 743, 1338 |
| EarI | CTCTTC | 2 cut(s) | 743, 1338 |
| Eco105I | TACGTA | 1 cut(s) | 526 |
| Eco130I | CCWWGG | 2 cut(s) | 1039, 1203 |
| Eco47I | GGWCC | 3 cut(s) | 251, 794, 1553 |
| Eco57I | CTGAAG | 2 cut(s) | 113, 1422 |
| EcoRII | CCWGG | 2 cut(s) | 267, 1117 |
| EcoT14I | CCWWGG | 2 cut(s) | 1039, 1203 |
| ErhI | CCWWGG | 2 cut(s) | 1039, 1203 |
| FaeI | CATG | 6 cut(s) | 238, 719, 1226, 1304, 1545, 1713 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 810, 842, 1139, 1171, 1556, 1588 |
| FaqI | GGGAC | 1 cut(s) | 1400 |
| FatI | CATG | 6 cut(s) | 234, 715, 1222, 1300, 1541, 1709 |
| FauI | CCCGC | 1 cut(s) | 1071 |
| FblI | GTMKAC | 2 cut(s) | 822, 1719 |
| Fnu4HI | GCNGC | 3 cut(s) | 108, 500, 869 |
| FokI | GGATG | 7 cut(s) | 575, 592, 701, 926, 1151, 1220, 1616 |
| Fsp4HI | GCNGC | 3 cut(s) | 108, 500, 869 |
| FspBI | CTAG | 1 cut(s) | 284 |
| GlaI | GCGC | 1 cut(s) | 169 |
| GluI | GCNGC | 3 cut(s) | 108, 500, 869 |
| HaeIII | GGCC | 4 cut(s) | 298, 1038, 1221, 1376 |
| HapII | CCGG | 3 cut(s) | 30, 155, 1004 |
| HgaI | GACGC | 1 cut(s) | 505 |
| HhaI | GCGC | 1 cut(s) | 170 |
| Hin1II | CATG | 6 cut(s) | 238, 719, 1226, 1304, 1545, 1713 |
| Hin6I | GCGC | 1 cut(s) | 168 |
| HinP1I | GCGC | 1 cut(s) | 168 |
| HincII | GTYRAC | 3 cut(s) | 367, 649, 1537 |
| HindII | GTYRAC | 3 cut(s) | 367, 649, 1537 |
| HpaI | GTTAAC | 1 cut(s) | 367 |
| HpaII | CCGG | 3 cut(s) | 30, 155, 1004 |
| HphI | GGTGA | 4 cut(s) | 257, 566, 1163, 1747 |
| Hpy188I | TCNGA | 8 cut(s) | 258, 319, 349, 448, 486, 541, 1194, 1402 |
| Hpy188III | TCNNGA | 3 cut(s) | 179, 308, 419 |
| Hpy99I | CGWCG | 1 cut(s) | 297 |
| HpyAV | CCTTC | 4 cut(s) | 673, 1342, 1569, 1668 |
| HpyCH4IV | ACGT | 2 cut(s) | 521, 525 |
| HpyCH4V | TGCA | 7 cut(s) | 110, 199, 443, 623, 788, 871, 1472 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 449 |
| HpyF3I | CTNAG | 9 cut(s) | 180, 241, 346, 471, 483, 512, 1098, 1563, 1573 |
| HpySE526I | ACGT | 2 cut(s) | 521, 525 |
| Hsp92II | CATG | 6 cut(s) | 238, 719, 1226, 1304, 1545, 1713 |
| HspAI | GCGC | 1 cut(s) | 168 |
| KspAI | GTTAAC | 1 cut(s) | 367 |
| KspI | CCGCGG | 1 cut(s) | 1029 |
| Kzo9I | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| LmnI | GCTCC | 2 cut(s) | 992, 1674 |
| Lsp1109I | GCAGC | 2 cut(s) | 94, 855 |
| LweI | GCATC | 5 cut(s) | 439, 452, 960, 1378, 1594 |
| MaeI | CTAG | 1 cut(s) | 284 |
| MaeII | ACGT | 2 cut(s) | 521, 525 |
| MaeIII | GTNAC | 4 cut(s) | 275, 572, 1151, 1351 |
| MalI | GATC | 6 cut(s) | 188, 361, 417, 807, 1167, 1490 |
| MboI | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| MfeI | CAATTG | 1 cut(s) | 789 |
| MflI | RGATCY | 2 cut(s) | 359, 1165 |
| MlsI | TGGCCA | 1 cut(s) | 1221 |
| MluCI | AATT | 6 cut(s) | 15, 212, 579, 708, 789, 1378 |
| MluNI | TGGCCA | 1 cut(s) | 1221 |
| MlyI | GAGTC | 7 cut(s) | 53, 160, 323, 338, 1220, 1532, 1700 |
| Mox20I | TGGCCA | 1 cut(s) | 1221 |
| MscI | TGGCCA | 1 cut(s) | 1221 |
| MseI | TTAA | 4 cut(s) | 366, 594, 767, 903 |
| MslI | CAYNNNNRTG | 3 cut(s) | 83, 720, 987 |
| Msp20I | TGGCCA | 1 cut(s) | 1221 |
| MspA1I | CMGCKG | 2 cut(s) | 1028, 1097 |
| MspI | CCGG | 3 cut(s) | 30, 155, 1004 |
| MspR9I | CCNGG | 3 cut(s) | 30, 269, 1119 |
| MunI | CAATTG | 1 cut(s) | 789 |
| Mva1269I | GAATGC | 2 cut(s) | 625, 790 |
| MvaI | CCWGG | 2 cut(s) | 269, 1119 |
| MvnI | CGCG | 3 cut(s) | 170, 499, 1028 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 449 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NdeII | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| NlaIII | CATG | 6 cut(s) | 238, 719, 1226, 1304, 1545, 1713 |
| NlaIV | GGNNCC | 1 cut(s) | 1167 |
| NmuCI | GTSAC | 3 cut(s) | 572, 1151, 1351 |
| NspI | RCATGY | 2 cut(s) | 719, 1304 |
| PciI | ACATGT | 1 cut(s) | 1300 |
| PctI | GAATGC | 2 cut(s) | 625, 790 |
| PfeI | GAWTC | 3 cut(s) | 320, 536, 704 |
| Pfl23II | CGTACG | 1 cut(s) | 522 |
| PkrI | GCNGC | 3 cut(s) | 109, 501, 870 |
| PleI | GAGTC | 7 cut(s) | 53, 159, 322, 338, 1220, 1532, 1700 |
| PpsI | GAGTC | 7 cut(s) | 53, 159, 322, 338, 1220, 1532, 1700 |
| Ppu21I | YACGTR | 1 cut(s) | 526 |
| PscI | ACATGT | 1 cut(s) | 1300 |
| PshAI | GACNNNNGTC | 1 cut(s) | 570 |
| Psp6I | CCWGG | 2 cut(s) | 267, 1117 |
| PspGI | CCWGG | 2 cut(s) | 267, 1117 |
| PspLI | CGTACG | 1 cut(s) | 522 |
| PspN4I | GGNNCC | 1 cut(s) | 1167 |
| PspPI | GGNCC | 3 cut(s) | 251, 794, 1553 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 649, 681 |
| PstI | CTGCAG | 1 cut(s) | 873 |
| PsuI | RGATCY | 2 cut(s) | 359, 1165 |
| PvuII | CAGCTG | 1 cut(s) | 1097 |
| RsaI | GTAC | 3 cut(s) | 524, 729, 1111 |
| RsaNI | GTAC | 3 cut(s) | 523, 728, 1110 |
| RseI | CAYNNNNRTG | 3 cut(s) | 83, 720, 987 |
| SacII | CCGCGG | 1 cut(s) | 1029 |
| SaqAI | TTAA | 4 cut(s) | 366, 594, 767, 903 |
| SatI | GCNGC | 3 cut(s) | 108, 500, 869 |
| Sau3AI | GATC | 6 cut(s) | 186, 359, 415, 805, 1165, 1488 |
| Sau96I | GGNCC | 3 cut(s) | 251, 794, 1553 |
| SchI | GAGTC | 7 cut(s) | 53, 160, 323, 338, 1220, 1532, 1700 |
| ScrFI | CCNGG | 3 cut(s) | 30, 269, 1119 |
| SfaNI | GCATC | 5 cut(s) | 439, 452, 960, 1378, 1594 |
| SfcI | CTRYAG | 2 cut(s) | 453, 869 |
| Sfr303I | CCGCGG | 1 cut(s) | 1029 |
| SgrBI | CCGCGG | 1 cut(s) | 1029 |
| SinI | GGWCC | 3 cut(s) | 251, 794, 1553 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 83, 720, 987 |
| SnaBI | TACGTA | 1 cut(s) | 526 |
| Sse9I | AATT | 6 cut(s) | 15, 212, 579, 708, 789, 1378 |
| SsiI | CCGC | 5 cut(s) | 499, 1026, 1028, 1078, 1570 |
| SspMI | CTAG | 1 cut(s) | 284 |
| StyD4I | CCNGG | 3 cut(s) | 28, 267, 1117 |
| StyI | CCWWGG | 2 cut(s) | 1039, 1203 |
| TaiI | ACGT | 2 cut(s) | 524, 528 |
| TaqI | TCGA | 2 cut(s) | 189, 1386 |
| TasI | AATT | 6 cut(s) | 15, 212, 579, 708, 789, 1378 |
| TatI | WGTACW | 2 cut(s) | 727, 1109 |
| TauI | GCSGC | 1 cut(s) | 502 |
| TfiI | GAWTC | 3 cut(s) | 320, 536, 704 |
| Tru1I | TTAA | 4 cut(s) | 366, 594, 767, 903 |
| Tru9I | TTAA | 4 cut(s) | 366, 594, 767, 903 |
| TscAI | CASTG | 8 cut(s) | 137, 376, 616, 690, 994, 1054, 1426, 1498 |
| TseFI | GTSAC | 3 cut(s) | 572, 1151, 1351 |
| TseI | GCWGC | 2 cut(s) | 107, 868 |
| Tsp45I | GTSAC | 3 cut(s) | 572, 1151, 1351 |
| TspDTI | ATGAA | 5 cut(s) | 243, 930, 1260, 1269, 1487 |
| TspRI | CASTG | 8 cut(s) | 137, 376, 616, 690, 994, 1054, 1426, 1498 |
| VpaK11BI | GGWCC | 3 cut(s) | 251, 794, 1553 |
| XapI | RAATTY | 1 cut(s) | 212 |
| XceI | RCATGY | 2 cut(s) | 719, 1304 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1707 |
| XmiI | GTMKAC | 2 cut(s) | 822, 1719 |
| XspI | CTAG | 1 cut(s) | 284 |