Prupe.2G179600_v2.0.a1

ABIL1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0004948
Physical Location & Seq
Forward (+)
22322079 .. 22325441
3363 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G179600.2

Sequence Viewer

Length: 927 bp
ATGGAGTTGGAGCAGTCCGGGTCGTTCAACCCGGCGATGACCTTCGACGAGGTCTCCATGGAGCGTAGCAAGAGCTTCGTCAAGGCCTTACAGGAACTCAAGAACTTAAGGCCTCAGCTTTATTCTGCTGCAGAATATTGTGAAAAGTCTTATCTTCATAGTGAGCAGAAGCAAATGGTACTGGATAACCTGAAAGATTATGCTGTGCGGGCCCTTGTTAATGCTGTCGATCACCTTGGCACTGTGGCTTACAAATTAACTGACCTTCTTGACCAGCAAACCTTAGATGTCTCAACCATGGATCTGACAGTTACTTGCCTAAATCAGAAACTTCTTACATGCAAAACATACATGGATAAAGAAGGGTCGAGGCAACAGCAGCTGTTGTCATTTATTCCGAGACATCACAAGCACTACATTTTACCAAATTCTGTCAATAAGAAGGTACATTTTAGTCCACATGTACAGACTGATACTAGACAACATCCTTATCAAGCAAGAGCGCATCTTCAATCTTCAAGTGCTGCTGCATCATCAAAAACTCTTTCCTGGCATTTAGCTTCAGAAACGAAGTCAACCTTGAAGGGGACTCCACAGGCTATGACTAGCGCTGGAGACACAAAAATTTCTGTAAACACTTCTGGAATTTTCCATCTTTTAGAAAATGAAGGGAGTAATCCTACAAAATCCTCGGCAACTCACCTTCAGCTGCCAAGTGGAGTTCCTGCTTCTGGTGGGGCCATGCAAACATTGGGAGCTGGACACAGGGAAGCGGTGGATGGTCAGAGACCAATGACGGCGTTCAGGTCATTTGATAACCCAAACCGGCGTCAGATTGTGCGTGTCCCTGTTCGCAGCAAAAGTGTGCTATCAGCTTTCTTTGCCAAACAGAAAACCATGAAGCTGAAGACTGGGTCTGTCTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

309

Amino Acids

34.17

Weight (kDa)

9.52

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 208, 773
AclWI GGATC 1 cut(s) 309
AcsI RAATTY 3 cut(s) 427, 624, 645
AcuI CTGAAG 3 cut(s) 546, 689, 926
AcyI GRCGYC 1 cut(s) 829
AfaI GTAC 3 cut(s) 180, 447, 465
AfeI AGCGCT 1 cut(s) 610
AfiI CCNNNNNNNGG 2 cut(s) 585, 731
AflII CTTAAG 1 cut(s) 106
AflIII ACRYGT 1 cut(s) 460
AgsI TTSAA 4 cut(s) 28, 512, 519, 583
AjnI CCWGG 1 cut(s) 548
AluBI AGCT 8 cut(s) 75, 118, 382, 560, 709, 758, 875, 904
AluI AGCT 8 cut(s) 75, 118, 382, 560, 709, 758, 875, 904
Alw26I GTCTC 5 cut(s) 58, 295, 394, 609, 781
AlwI GGATC 1 cut(s) 309
AlwNI CAGNNNCTG 1 cut(s) 382
Aor51HI AGCGCT 1 cut(s) 610
AoxI GGCC 4 cut(s) 84, 110, 210, 738
ApaI GGGCCC 1 cut(s) 214
ApeKI GCWGC 6 cut(s) 128, 379, 524, 527, 709, 855
ApoI RAATTY 3 cut(s) 427, 624, 645
AspLEI GCGC 2 cut(s) 505, 611
AspS9I GGNCC 3 cut(s) 210, 211, 738
AsuC2I CCSGG 2 cut(s) 19, 32
AsuHPI GGTGA 2 cut(s) 224, 692
BaeGI GKGCMC 1 cut(s) 214
BanII GRGCYC 1 cut(s) 214
BauI CACGAG 1 cut(s) 922
BbsI GAAGAC 1 cut(s) 914
BbvCI CCTCAGC 1 cut(s) 114
BbvI GCAGC 6 cut(s) 115, 391, 511, 514, 696, 867
BccI CCATC 2 cut(s) 660, 773
BceAI ACGGC 1 cut(s) 813
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BciT130I CCWGG 1 cut(s) 550
BcnI CCSGG 2 cut(s) 19, 32
BcoDI GTCTC 5 cut(s) 58, 295, 394, 609, 781
BfaI CTAG 2 cut(s) 477, 606
BfmI CTRYAG 1 cut(s) 129
BfoI RGCGCY 1 cut(s) 612
BfrI CTTAAG 1 cut(s) 106
BisI GCNGC 6 cut(s) 129, 380, 525, 528, 710, 856
BlsI GCNGC 6 cut(s) 130, 381, 526, 529, 711, 857
Bme1390I CCNGG 3 cut(s) 19, 32, 550
BmgT120I GGNCC 3 cut(s) 210, 211, 738
BmiI GGNNCC 2 cut(s) 212, 739
BmrFI CCNGG 3 cut(s) 19, 32, 550
BmrI ACTGGG 1 cut(s) 921
BmsI GCATC 2 cut(s) 514, 539
BmuI ACTGGG 1 cut(s) 921
BpiI GAAGAC 1 cut(s) 914
BpmI CTGGAG 1 cut(s) 633
Bpu10I CCTNAGC 1 cut(s) 114
BpuEI CTTGAG 1 cut(s) 83
BpuMI CCSGG 2 cut(s) 19, 32
BsaHI GRCGYC 1 cut(s) 829
BsaI GGTCTC 2 cut(s) 58, 781
BsaJI CCNNGG 4 cut(s) 57, 235, 297, 690
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 2 cut(s) 585, 731
Bse118I RCCGGY 1 cut(s) 825
Bse1I ACTGG 2 cut(s) 186, 916
BseBI CCWGG 1 cut(s) 550
BseDI CCNNGG 4 cut(s) 57, 235, 297, 690
BseGI GGATG 2 cut(s) 484, 784
BseLI CCNNNNNNNGG 2 cut(s) 585, 731
BseMII CTCAG 1 cut(s) 128
BseNI ACTGG 2 cut(s) 186, 916
BseSI GKGCMC 1 cut(s) 214
BseXI GCAGC 6 cut(s) 115, 391, 511, 514, 696, 867
BshFI GGCC 4 cut(s) 86, 112, 212, 740
BsiSI CCGG 3 cut(s) 18, 32, 826
BslFI GGGAC 2 cut(s) 601, 830
BslI CCNNNNNNNGG 2 cut(s) 585, 731
BsmAI GTCTC 5 cut(s) 58, 295, 394, 609, 781
BsmFI GGGAC 2 cut(s) 601, 830
BsnI GGCC 4 cut(s) 86, 112, 212, 740
Bso31I GGTCTC 2 cut(s) 58, 781
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 1 cut(s) 214
Bsp1407I TGTACA 1 cut(s) 463
Bsp143I GATC 2 cut(s) 229, 301
Bsp19I CCATGG 2 cut(s) 57, 297
BspACI CCGC 2 cut(s) 208, 773
BspANI GGCC 4 cut(s) 86, 112, 212, 740
BspCNI CTCAG 1 cut(s) 127
BspLI GGNNCC 2 cut(s) 212, 739
BspMAI CTGCAG 1 cut(s) 133
BspPI GGATC 1 cut(s) 309
BspTI CTTAAG 1 cut(s) 106
BspTNI GGTCTC 2 cut(s) 58, 781
BsrFI RCCGGY 1 cut(s) 825
BsrGI TGTACA 1 cut(s) 463
BsrI ACTGG 2 cut(s) 186, 916
BssAI RCCGGY 1 cut(s) 825
BssECI CCNNGG 4 cut(s) 57, 235, 297, 690
BssMI GATC 2 cut(s) 229, 301
BssNI GRCGYC 1 cut(s) 829
BssSI CACGAG 1 cut(s) 922
BssT1I CCWWGG 3 cut(s) 57, 235, 297
Bst2BI CACGAG 1 cut(s) 922
Bst2UI CCWGG 1 cut(s) 550
Bst4CI ACNGT 2 cut(s) 244, 310
BstACI GRCGYC 1 cut(s) 829
BstAFI CTTAAG 1 cut(s) 106
BstAUI TGTACA 1 cut(s) 463
BstC8I GCNNGC 1 cut(s) 210
BstDEI CTNAG 2 cut(s) 114, 283
BstDSI CCRYGG 2 cut(s) 57, 297
BstF5I GGATG 2 cut(s) 484, 784
BstH2I RGCGCY 1 cut(s) 612
BstHHI GCGC 2 cut(s) 505, 611
BstKTI GATC 2 cut(s) 232, 304
BstMAI GTCTC 5 cut(s) 58, 295, 394, 609, 781
BstMBI GATC 2 cut(s) 229, 301
BstMWI GCNNNNNNNGC 3 cut(s) 209, 379, 881
BstNI CCWGG 1 cut(s) 550
BstNSI RCATGY 2 cut(s) 342, 464
BstSCI CCNGG 3 cut(s) 17, 30, 548
BstSFI CTRYAG 1 cut(s) 129
BstSLI GKGCMC 1 cut(s) 214
BstV1I GCAGC 6 cut(s) 115, 391, 511, 514, 696, 867
BstV2I GAAGAC 1 cut(s) 914
BstX2I RGATCY 1 cut(s) 301
BstYI RGATCY 1 cut(s) 301
BsuRI GGCC 4 cut(s) 86, 112, 212, 740
BtgI CCRYGG 2 cut(s) 57, 297
BtgZI GCGATG 1 cut(s) 50
BtsCI GGATG 2 cut(s) 484, 784
BtsIMutI CAGTG 1 cut(s) 240
Cac8I GCNNGC 1 cut(s) 210
CaiI CAGNNNCTG 1 cut(s) 382
CfoI GCGC 2 cut(s) 505, 611
Cfr10I RCCGGY 1 cut(s) 825
Cfr13I GGNCC 3 cut(s) 210, 211, 738
CseI GACGC 1 cut(s) 818
Csp6I GTAC 3 cut(s) 179, 446, 464
CviAII CATG 7 cut(s) 58, 298, 339, 352, 461, 742, 898
CviQI GTAC 3 cut(s) 179, 446, 464
DdeI CTNAG 2 cut(s) 114, 283
DpnI GATC 2 cut(s) 231, 303
DpnII GATC 2 cut(s) 229, 301
Eco130I CCWWGG 3 cut(s) 57, 235, 297
Eco147I AGGCCT 2 cut(s) 86, 112
Eco24I GRGCYC 1 cut(s) 214
Eco31I GGTCTC 2 cut(s) 58, 781
Eco47III AGCGCT 1 cut(s) 610
Eco57I CTGAAG 3 cut(s) 546, 689, 926
EcoO109I RGGNCCY 1 cut(s) 211
EcoRII CCWGG 1 cut(s) 548
EcoT14I CCWWGG 3 cut(s) 57, 235, 297
EcoT38I GRGCYC 1 cut(s) 214
ErhI CCWWGG 3 cut(s) 57, 235, 297
FaeI CATG 7 cut(s) 61, 301, 342, 355, 464, 745, 901
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 2 cut(s) 601, 830
FatI CATG 7 cut(s) 57, 297, 338, 351, 460, 741, 897
FauI CCCGC 1 cut(s) 201
Fnu4HI GCNGC 6 cut(s) 129, 380, 525, 528, 710, 856
FokI GGATG 2 cut(s) 471, 791
FriOI GRGCYC 1 cut(s) 214
Fsp4HI GCNGC 6 cut(s) 129, 380, 525, 528, 710, 856
FspBI CTAG 2 cut(s) 477, 606
GlaI GCGC 2 cut(s) 504, 610
GluI GCNGC 6 cut(s) 129, 380, 525, 528, 710, 856
GsuI CTGGAG 1 cut(s) 633
HaeII RGCGCY 1 cut(s) 612
HaeIII GGCC 4 cut(s) 86, 112, 212, 740
HapII CCGG 3 cut(s) 18, 32, 826
HgaI GACGC 1 cut(s) 818
HhaI GCGC 2 cut(s) 505, 611
Hin1I GRCGYC 1 cut(s) 829
Hin1II CATG 7 cut(s) 61, 301, 342, 355, 464, 745, 901
Hin6I GCGC 2 cut(s) 503, 609
HinP1I GCGC 2 cut(s) 503, 609
HincII GTYRAC 1 cut(s) 576
HindII GTYRAC 1 cut(s) 576
HinfI GANTC 1 cut(s) 589
HpaII CCGG 3 cut(s) 18, 32, 826
HphI GGTGA 2 cut(s) 224, 692
Hpy166II GTNNAC 3 cut(s) 458, 576, 634
Hpy188I TCNGA 6 cut(s) 306, 327, 399, 565, 786, 834
Hpy188III TCNNGA 4 cut(s) 100, 269, 642, 924
Hpy8I GTNNAC 3 cut(s) 458, 576, 634
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 7 cut(s) 52, 275, 356, 436, 577, 662, 713
HpyCH4III ACNGT 2 cut(s) 244, 310
HpyCH4V TGCA 4 cut(s) 131, 342, 530, 745
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 379, 881
HpyF3I CTNAG 2 cut(s) 114, 283
Hsp92I GRCGYC 1 cut(s) 829
Hsp92II CATG 7 cut(s) 61, 301, 342, 355, 464, 745, 901
HspAI GCGC 2 cut(s) 503, 609
Kzo9I GATC 2 cut(s) 229, 301
LmnI GCTCC 3 cut(s) 10, 61, 755
Lsp1109I GCAGC 6 cut(s) 115, 391, 511, 514, 696, 867
LweI GCATC 2 cut(s) 514, 539
MaeI CTAG 2 cut(s) 477, 606
MaeIII GTNAC 1 cut(s) 310
MalI GATC 2 cut(s) 231, 303
MboI GATC 2 cut(s) 229, 301
MboII GAAGA 4 cut(s) 146, 500, 507, 919
MflI RGATCY 1 cut(s) 301
MhlI GDGCHC 1 cut(s) 214
MluCI AATT 4 cut(s) 254, 427, 624, 645
MlyI GAGTC 1 cut(s) 583
MnlI CCTC 4 cut(s) 43, 123, 363, 700
MseI TTAA 3 cut(s) 107, 219, 257
MspA1I CMGCKG 2 cut(s) 382, 709
MspCI CTTAAG 1 cut(s) 106
MspI CCGG 3 cut(s) 18, 32, 826
MspR9I CCNGG 3 cut(s) 19, 32, 550
MvaI CCWGG 1 cut(s) 550
MwoI GCNNNNNNNGC 3 cut(s) 209, 379, 881
NciI CCSGG 2 cut(s) 19, 32
NcoI CCATGG 2 cut(s) 57, 297
NdeII GATC 2 cut(s) 229, 301
NlaIII CATG 7 cut(s) 61, 301, 342, 355, 464, 745, 901
NlaIV GGNNCC 2 cut(s) 212, 739
NmeAIII GCCGAG 1 cut(s) 671
NspI RCATGY 2 cut(s) 342, 464
PceI AGGCCT 2 cut(s) 86, 112
PciI ACATGT 1 cut(s) 460
PflFI GACNNNGTC 2 cut(s) 50, 913
PkrI GCNGC 6 cut(s) 130, 381, 526, 529, 711, 857
PleI GAGTC 1 cut(s) 583
PpsI GAGTC 1 cut(s) 583
PscI ACATGT 1 cut(s) 460
Psp6I CCWGG 1 cut(s) 548
PspGI CCWGG 1 cut(s) 548
PspN4I GGNNCC 2 cut(s) 212, 739
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 3 cut(s) 210, 211, 738
PstI CTGCAG 1 cut(s) 133
PstNI CAGNNNCTG 1 cut(s) 382
PsuI RGATCY 1 cut(s) 301
PsyI GACNNNGTC 2 cut(s) 50, 913
PvuII CAGCTG 2 cut(s) 382, 709
RsaI GTAC 3 cut(s) 180, 447, 465
RsaNI GTAC 3 cut(s) 179, 446, 464
SaqAI TTAA 3 cut(s) 107, 219, 257
SatI GCNGC 6 cut(s) 129, 380, 525, 528, 710, 856
Sau3AI GATC 2 cut(s) 229, 301
Sau96I GGNCC 3 cut(s) 210, 211, 738
SchI GAGTC 1 cut(s) 583
ScrFI CCNGG 3 cut(s) 19, 32, 550
SduI GDGCHC 1 cut(s) 214
SfaNI GCATC 2 cut(s) 514, 539
SfcI CTRYAG 1 cut(s) 129
SmlI CTYRAG 2 cut(s) 98, 106
SmoI CTYRAG 2 cut(s) 98, 106
Sse9I AATT 4 cut(s) 254, 427, 624, 645
SseBI AGGCCT 2 cut(s) 86, 112
SsiI CCGC 2 cut(s) 208, 773
SspI AATATT 1 cut(s) 137
SspMI CTAG 2 cut(s) 477, 606
StuI AGGCCT 2 cut(s) 86, 112
StyD4I CCNGG 3 cut(s) 17, 30, 548
StyI CCWWGG 3 cut(s) 57, 235, 297
TaaI ACNGT 2 cut(s) 244, 310
TaqI TCGA 3 cut(s) 45, 228, 368
TasI AATT 4 cut(s) 254, 427, 624, 645
TatI WGTACW 1 cut(s) 463
Tru1I TTAA 3 cut(s) 107, 219, 257
Tru9I TTAA 3 cut(s) 107, 219, 257
TscAI CASTG 1 cut(s) 247
TseI GCWGC 6 cut(s) 128, 379, 524, 527, 709, 855
TspDTI ATGAA 3 cut(s) 146, 681, 914
TspRI CASTG 1 cut(s) 247
Tth111I GACNNNGTC 2 cut(s) 50, 913
Vha464I CTTAAG 1 cut(s) 106
XapI RAATTY 3 cut(s) 427, 624, 645
XceI RCATGY 2 cut(s) 342, 464
XcmI CCANNNNNNNNNTGG 1 cut(s) 748
XspI CTAG 2 cut(s) 477, 606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.