Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004169

Physical Location & Seq

Genomic Coordinates Forward (+)

23331254 .. 23335455

Gene Structure 4202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G195700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGAGATAAACCTGTTCAAGTTATGCTCCGGCCTCAAAGTCATCGGCTACTTCATGATCCTCTTGGTTGCCGCCATAATTTCCCTCTCCTACTACGCCGTCGTTGTGGTGACTTGGGGCCCAGAGCTGCTCAGCGGCGGGCTCCACTCTTTTCTAGCCTTCTTCATCATCATTCTCTTCCACTTTCTGCTTATAATGTTATTGTGGAGCTACTTTATGGTTGTCTTTAAAGACCCGGGTTCTGTTCCCAACAATTGGAAACCTCTAACAGAGGAGGAAGTTTTGGAGGCTGGTAGTTCTCTGACTTTGTCAGAAAGTATAGAACCCGAGGCTTTCACTTCCACACACTCTGCAGATGGACGAGAAAGAAGACCACAAGTAGGATATTGTAGTCGATGCCAAAACGGGAAGCCACCACGATGCCATCATTGCTCTGTTTGTCAAAGATGTGTACTTAAGATGGATCACCATTGTGTTTGGGTGGTGAATTGTGTTGGTGCACGCAACTACAAGTTTTTTCTTCTTTTCTTGCTGTATACATTTCTGGAGACGACAATGGATACCTTCATTTTGCTACCAAATTTTATCGATTTTTTCTCAGAAGCCAAGAATCATTCAACATCCCCTGGCAATCTTGCAGTTATTTTTTTGACTTTTGTGCTTAATTTAGCCTTTGCATTGAGTCTTCTTTGTTTCGTGGTTATGCATGTGTCCCTTCTGTCAAGCAACACCACTACCATAGAGGTTCATGAGAAGAGAAGAGGAATCAGATGGAAGTATGACTTGGGCAGGAAGAAGAATTTTGAGCAGGTTTTCGGCACGAAGAAGGCACTATGGTTTTTCCCACTGGTCTCAAAGGAGGATTTAAACAACATACCTGCTCTTCGGGGCCTGGAATTTCCAACACTTTCCGATGGTGAGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHHC

Protein Analysis

309

Amino Acids

35.03

Weight (kDa)

7.59

Isoelectric Point (pI)

36.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00840 AT4G00840
fragaria_vesca	FvH4_7g17410 FvH4_7g17410 FvH4_7g17410 FvH4_7g17410 FvH4_7g17410 FvH4_7g17410 FvH4_7g17410 FvH4_7g17410
malus_domestica	MD01G1087100.v1.1 MD07G1157300.v1.1
prunus_persica	Prupe.2G195700_v2.0.a1 Prupe.2G195700_v2.0.a1 Prupe.2G195700_v2.0.a1
pyrus_communis	pycom01g11100 pycom07g15370 pycom07g15390
rosa_chinensis	RchiOBHm_Chr1g0360851
rosa_laevigata	RLG00000027781
rosa_multiflora	Rmu_co8452039.1_g000001 Rmu_ssc0000022.1_g000048
rosa_roxburghii	Rroxscaffold_4G00295760
rosa_rugosa	Rorug01G0282300 Rorug01G0282300 Rorug01G0282300 Rorug01G0282300 Rorug01G0282300
rosa_samantha	Rh1AG294000 Rh1BG258800 Rh1CG276400 Rh1DG289000
rosa_wichuraiana	Rw1G026020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	194
Acc36I	ACCTGC	2 cut(s)	799, 886
AccB7I	CCANNNNNTGG	1 cut(s)	255
AccI	GTMKAC	1 cut(s)	536
AciI	CCGC	3 cut(s)	72, 135, 138
AclWI	GGATC	2 cut(s)	52, 471
AcsI	RAATTY	3 cut(s)	580, 799, 896
AfaI	GTAC	1 cut(s)	453
AfiI	CCNNNNNNNGG	2 cut(s)	255, 380
AflII	CTTAAG	1 cut(s)	455
AgsI	TTSAA	2 cut(s)	19, 618
AjnI	CCWGG	2 cut(s)	625, 891
AjuI	GAANNNNNNNTTGG	2 cut(s)	767, 799
AleI	CACNNNNGTG	1 cut(s)	471
AluBI	AGCT	2 cut(s)	127, 210
AluI	AGCT	2 cut(s)	127, 210
Alw21I	GWGCWC	1 cut(s)	502
Alw26I	GTCTC	2 cut(s)	542, 856
Alw44I	GTGCAC	1 cut(s)	498
AlwI	GGATC	2 cut(s)	52, 471
Ama87I	CYCGRG	2 cut(s)	235, 326
AoxI	GGCC	3 cut(s)	31, 118, 889
ApaI	GGGCCC	1 cut(s)	122
ApaLI	GTGCAC	1 cut(s)	498
ApeKI	GCWGC	1 cut(s)	127
ApoI	RAATTY	3 cut(s)	580, 799, 896
AspS9I	GGNCC	3 cut(s)	118, 119, 889
AsuC2I	CCSGG	2 cut(s)	236, 237
AsuHPI	GGTGA	3 cut(s)	121, 458, 496
AvaI	CYCGRG	2 cut(s)	235, 326
BaeGI	GKGCMC	2 cut(s)	122, 502
BanII	GRGCYC	2 cut(s)	122, 144
BbsI	GAAGAC	2 cut(s)	376, 677
Bbv12I	GWGCWC	1 cut(s)	502
BbvI	GCAGC	1 cut(s)	114
BccI	CCATC	5 cut(s)	350, 432, 454, 765, 908
BceAI	ACGGC	1 cut(s)	83
BciT130I	CCWGG	2 cut(s)	627, 893
BciVI	GTATCC	1 cut(s)	553
BcnI	CCSGG	2 cut(s)	236, 237
BcoDI	GTCTC	2 cut(s)	542, 856
BfaI	CTAG	1 cut(s)	155
BfmI	CTRYAG	1 cut(s)	351
BfrI	CTTAAG	1 cut(s)	455
BfuAI	ACCTGC	2 cut(s)	799, 886
BfuI	GTATCC	1 cut(s)	553
BisI	GCNGC	3 cut(s)	72, 128, 136
BlpI	GCTNAGC	1 cut(s)	131
BlsI	GCNGC	3 cut(s)	73, 129, 137
Bme1390I	CCNGG	4 cut(s)	236, 237, 627, 893
BmeT110I	CYCGRG	2 cut(s)	235, 326
BmgT120I	GGNCC	3 cut(s)	118, 119, 889
BmiI	GGNNCC	4 cut(s)	119, 120, 143, 890
BmrFI	CCNGG	4 cut(s)	236, 237, 627, 893
BmsI	GCATC	2 cut(s)	386, 410
BpiI	GAAGAC	2 cut(s)	376, 677
BpmI	CTGGAG	1 cut(s)	566
Bpu1102I	GCTNAGC	1 cut(s)	131
BpuMI	CCSGG	2 cut(s)	236, 237
Bsa29I	ATCGAT	1 cut(s)	588
BsaI	GGTCTC	1 cut(s)	856
BsaJI	CCNNGG	3 cut(s)	235, 327, 625
Bsc4I	CCNNNNNNNGG	2 cut(s)	255, 380
Bse1I	ACTGG	1 cut(s)	852
Bse3DI	GCAATG	1 cut(s)	427
BseBI	CCWGG	2 cut(s)	627, 893
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	3 cut(s)	235, 327, 625
BseGI	GGATG	1 cut(s)	620
BseLI	CCNNNNNNNGG	2 cut(s)	255, 380
BseMI	GCAATG	1 cut(s)	427
BseMII	CTCAG	2 cut(s)	145, 612
BseNI	ACTGG	1 cut(s)	852
BseRI	GAGGAG	1 cut(s)	287
BseSI	GKGCMC	2 cut(s)	122, 502
BseXI	GCAGC	1 cut(s)	114
BshFI	GGCC	3 cut(s)	33, 120, 891
BshVI	ATCGAT	1 cut(s)	588
BsiHKAI	GWGCWC	1 cut(s)	502
BsiHKCI	CYCGRG	2 cut(s)	235, 326
BsiSI	CCGG	2 cut(s)	30, 236
BslFI	GGGAC	1 cut(s)	697
BslI	CCNNNNNNNGG	2 cut(s)	255, 380
BsmAI	GTCTC	2 cut(s)	542, 856
BsmBI	CGTCTC	1 cut(s)	542
BsmFI	GGGAC	1 cut(s)	697
BsnI	GGCC	3 cut(s)	33, 120, 891
Bso31I	GGTCTC	1 cut(s)	856
BsoBI	CYCGRG	2 cut(s)	235, 326
Bsp120I	GGGCCC	1 cut(s)	118
Bsp1286I	GDGCHC	3 cut(s)	122, 144, 502
Bsp143I	GATC	2 cut(s)	57, 463
Bsp1720I	GCTNAGC	1 cut(s)	131
BspACI	CCGC	3 cut(s)	72, 135, 138
BspANI	GGCC	3 cut(s)	33, 120, 891
BspCNI	CTCAG	2 cut(s)	144, 611
BspDI	ATCGAT	1 cut(s)	588
BspHI	TCATGA	2 cut(s)	54, 748
BspLI	GGNNCC	4 cut(s)	119, 120, 143, 890
BspMAI	CTGCAG	1 cut(s)	355
BspMI	ACCTGC	2 cut(s)	799, 886
BspPI	GGATC	2 cut(s)	52, 471
BspQI	GCTCTTC	1 cut(s)	888
BspTI	CTTAAG	1 cut(s)	455
BspTNI	GGTCTC	1 cut(s)	856
BsrDI	GCAATG	1 cut(s)	427
BsrI	ACTGG	1 cut(s)	852
BssECI	CCNNGG	3 cut(s)	235, 327, 625
BssMI	GATC	2 cut(s)	57, 463
BssNAI	GTATAC	1 cut(s)	537
Bst1107I	GTATAC	1 cut(s)	537
Bst2UI	CCWGG	2 cut(s)	627, 893
Bst6I	CTCTTC	4 cut(s)	182, 749, 754, 888
BstAFI	CTTAAG	1 cut(s)	455
BstC8I	GCNNGC	2 cut(s)	140, 502
BstDEI	CTNAG	2 cut(s)	131, 598
BstF5I	GGATG	1 cut(s)	620
BstKTI	GATC	2 cut(s)	60, 466
BstMAI	GTCTC	2 cut(s)	542, 856
BstMBI	GATC	2 cut(s)	57, 463
BstMWI	GCNNNNNNNGC	1 cut(s)	429
BstNI	CCWGG	2 cut(s)	627, 893
BstNSI	RCATGY	1 cut(s)	710
BstSCI	CCNGG	4 cut(s)	234, 235, 625, 891
BstSFI	CTRYAG	1 cut(s)	351
BstSLI	GKGCMC	2 cut(s)	122, 502
BstV1I	GCAGC	1 cut(s)	114
BstV2I	GAAGAC	2 cut(s)	376, 677
BstZ17I	GTATAC	1 cut(s)	537
Bsu15I	ATCGAT	1 cut(s)	588
BsuI	GTATCC	1 cut(s)	553
BsuRI	GGCC	3 cut(s)	33, 120, 891
BsuTUI	ATCGAT	1 cut(s)	588
BtsCI	GGATG	1 cut(s)	620
BtsIMutI	CAGTG	1 cut(s)	845
BveI	ACCTGC	2 cut(s)	799, 886
Cac8I	GCNNGC	2 cut(s)	140, 502
CciI	TCATGA	2 cut(s)	54, 748
Cfr13I	GGNCC	3 cut(s)	118, 119, 889
Cfr9I	CCCGGG	1 cut(s)	235
ClaI	ATCGAT	1 cut(s)	588
Csp6I	GTAC	1 cut(s)	452
CviAII	CATG	3 cut(s)	55, 707, 749
CviQI	GTAC	1 cut(s)	452
DdeI	CTNAG	2 cut(s)	131, 598
DpnI	GATC	2 cut(s)	59, 465
DpnII	GATC	2 cut(s)	57, 463
DraI	TTTAAA	2 cut(s)	229, 867
Eam1104I	CTCTTC	4 cut(s)	182, 749, 754, 888
EarI	CTCTTC	4 cut(s)	182, 749, 754, 888
Eco24I	GRGCYC	2 cut(s)	122, 144
Eco31I	GGTCTC	1 cut(s)	856
Eco88I	CYCGRG	2 cut(s)	235, 326
EcoO109I	RGGNCCY	2 cut(s)	118, 889
EcoRII	CCWGG	2 cut(s)	625, 891
EcoT22I	ATGCAT	1 cut(s)	708
EcoT38I	GRGCYC	2 cut(s)	122, 144
Esp3I	CGTCTC	1 cut(s)	542
FaeI	CATG	3 cut(s)	58, 710, 752
FalI	AAGNNNNNCTT	2 cut(s)	767, 799
FaqI	GGGAC	1 cut(s)	697
FatI	CATG	3 cut(s)	54, 706, 748
FauI	CCCGC	1 cut(s)	131
FblI	GTMKAC	1 cut(s)	536
Fnu4HI	GCNGC	3 cut(s)	72, 128, 136
FokI	GGATG	1 cut(s)	607
FriOI	GRGCYC	2 cut(s)	122, 144
Fsp4HI	GCNGC	3 cut(s)	72, 128, 136
FspBI	CTAG	1 cut(s)	155
GluI	GCNGC	3 cut(s)	72, 128, 136
GsuI	CTGGAG	1 cut(s)	566
HaeIII	GGCC	3 cut(s)	33, 120, 891
HapII	CCGG	2 cut(s)	30, 236
Hin1II	CATG	3 cut(s)	58, 710, 752
HinfI	GANTC	3 cut(s)	610, 682, 765
HpaII	CCGG	2 cut(s)	30, 236
HphI	GGTGA	3 cut(s)	121, 458, 496
Hpy166II	GTNNAC	3 cut(s)	452, 500, 537
Hpy188I	TCNGA	5 cut(s)	303, 313, 601, 770, 913
Hpy188III	TCNNGA	3 cut(s)	55, 545, 749
Hpy8I	GTNNAC	3 cut(s)	452, 500, 537
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	4 cut(s)	169, 574, 725, 820
HpyCH4V	TGCA	5 cut(s)	353, 500, 638, 677, 706
HpyF10VI	GCNNNNNNNGC	1 cut(s)	429
HpyF3I	CTNAG	2 cut(s)	131, 598
Hsp92II	CATG	3 cut(s)	58, 710, 752
Kzo9I	GATC	2 cut(s)	57, 463
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	3 cut(s)	32, 147, 207
Lsp1109I	GCAGC	1 cut(s)	114
LweI	GCATC	2 cut(s)	386, 410
MaeI	CTAG	1 cut(s)	155
MaeIII	GTNAC	1 cut(s)	109
MalI	GATC	2 cut(s)	59, 465
MboI	GATC	2 cut(s)	57, 463
MfeI	CAATTG	1 cut(s)	253
MhlI	GDGCHC	3 cut(s)	122, 144, 502
MluCI	AATT	7 cut(s)	78, 253, 487, 580, 664, 799, 896
MlyI	GAGTC	1 cut(s)	691
MmeI	TCCRAC	1 cut(s)	926
Mph1103I	ATGCAT	1 cut(s)	708
MseI	TTAA	4 cut(s)	228, 456, 663, 866
MslI	CAYNNNNRTG	2 cut(s)	418, 471
MspA1I	CMGCKG	1 cut(s)	135
MspCI	CTTAAG	1 cut(s)	455
MspI	CCGG	2 cut(s)	30, 236
MspR9I	CCNGG	4 cut(s)	236, 237, 627, 893
MunI	CAATTG	1 cut(s)	253
MvaI	CCWGG	2 cut(s)	627, 893
MwoI	GCNNNNNNNGC	1 cut(s)	429
NciI	CCSGG	2 cut(s)	236, 237
NdeII	GATC	2 cut(s)	57, 463
NlaIII	CATG	3 cut(s)	58, 710, 752
NlaIV	GGNNCC	4 cut(s)	119, 120, 143, 890
NmuCI	GTSAC	1 cut(s)	109
NsiI	ATGCAT	1 cut(s)	708
NspI	RCATGY	1 cut(s)	710
OliI	CACNNNNGTG	1 cut(s)	471
PagI	TCATGA	2 cut(s)	54, 748
PciSI	GCTCTTC	1 cut(s)	888
PfeI	GAWTC	2 cut(s)	610, 765
PflFI	GACNNNGTC	1 cut(s)	307
PflMI	CCANNNNNTGG	1 cut(s)	255
PkrI	GCNGC	3 cut(s)	73, 129, 137
PleI	GAGTC	1 cut(s)	690
PpsI	GAGTC	1 cut(s)	690
PsiI	TTATAA	1 cut(s)	194
Psp6I	CCWGG	2 cut(s)	625, 891
PspGI	CCWGG	2 cut(s)	625, 891
PspN4I	GGNNCC	4 cut(s)	119, 120, 143, 890
PspOMI	GGGCCC	1 cut(s)	118
PspPI	GGNCC	3 cut(s)	118, 119, 889
PstI	CTGCAG	1 cut(s)	355
PsyI	GACNNNGTC	1 cut(s)	307
RsaI	GTAC	1 cut(s)	453
RsaNI	GTAC	1 cut(s)	452
RseI	CAYNNNNRTG	2 cut(s)	418, 471
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	4 cut(s)	228, 456, 663, 866
SatI	GCNGC	3 cut(s)	72, 128, 136
Sau3AI	GATC	2 cut(s)	57, 463
Sau96I	GGNCC	3 cut(s)	118, 119, 889
SchI	GAGTC	1 cut(s)	691
ScrFI	CCNGG	4 cut(s)	236, 237, 627, 893
SduI	GDGCHC	3 cut(s)	122, 144, 502
SetI	ASST	8 cut(s)	15, 129, 212, 265, 566, 747, 813, 880
SfaNI	GCATC	2 cut(s)	386, 410
SfcI	CTRYAG	1 cut(s)	351
SmaI	CCCGGG	1 cut(s)	237
SmiMI	CAYNNNNRTG	2 cut(s)	418, 471
SmlI	CTYRAG	1 cut(s)	455
SmoI	CTYRAG	1 cut(s)	455
Sse9I	AATT	7 cut(s)	78, 253, 487, 580, 664, 799, 896
SsiI	CCGC	3 cut(s)	72, 135, 138
SspMI	CTAG	1 cut(s)	155
StyD4I	CCNGG	4 cut(s)	234, 235, 625, 891
TaqI	TCGA	2 cut(s)	394, 588
TasI	AATT	7 cut(s)	78, 253, 487, 580, 664, 799, 896
TatI	WGTACW	1 cut(s)	451
TauI	GCSGC	2 cut(s)	74, 138
TfiI	GAWTC	2 cut(s)	610, 765
Tru1I	TTAA	4 cut(s)	228, 456, 663, 866
Tru9I	TTAA	4 cut(s)	228, 456, 663, 866
TscAI	CASTG	1 cut(s)	852
TseFI	GTSAC	1 cut(s)	109
TseI	GCWGC	1 cut(s)	127
Tsp45I	GTSAC	1 cut(s)	109
TspDTI	ATGAA	4 cut(s)	43, 154, 556, 737
TspMI	CCCGGG	1 cut(s)	235
TspRI	CASTG	1 cut(s)	852
Tth111I	GACNNNGTC	1 cut(s)	307
Van91I	CCANNNNNTGG	1 cut(s)	255
Vha464I	CTTAAG	1 cut(s)	455
VneI	GTGCAC	1 cut(s)	498
XapI	RAATTY	3 cut(s)	580, 799, 896
XceI	RCATGY	1 cut(s)	710
XmaI	CCCGGG	1 cut(s)	235
XmiI	GTMKAC	1 cut(s)	536
XspI	CTAG	1 cut(s)	155
Zsp2I	ATGCAT	1 cut(s)	708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.