Prupe.2G198800_v2.0.a1

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
23614277 .. 23617595
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G198800.1

Sequence Viewer

Length: 1296 bp
ATGGAGAGGCTTCAAGGACCCATTGATCCCTGTTTTTTTGGTGAGCATTTGGATTTTCAGTGCTTAGAACAAGGATTGAGCACCACAGAAAGCTTGAGATTTGAGGAAGAAGAAGAAGCAGCACATCTCTCAATACCAAGCTTGGAAGACAAAATGCCATTCCTTCAGATGTTACAAACTGTAAACTCCCCCCCACCTTACTTTCCCTTGAAAGAGCCAAGCTTTCAGGCACTCTTGAGACTACATCACCTAAAGAATCCATGGGAGTTAGGCAAAGCCTACATGCCTGAAATGGAGACCCAACTTCAGACAGCACTAGAGATTGAGAGCTGTGTGACCCATGACATGGTTGAGTTGCATTCACCTGTTAAATCAGAAGCCAAGGACCTTCATAATCACCCACATTCAGTTTCTGCTGGTAATCTGGAGGCTGTTAGTTCAGAGTGCATCCAAGACCAGGAACAGCCCAACTCAGCTGAAATTAACTGTTGTAGGAAAGGCAATAACTCATCAGGATCTCCTCCACCTACCTGGGCTCAAGCACAAAATGAACCTGAGCAGACCCAGTACCCCAAATCCCCTCCAGTCACCAGAGAAAGAAGAAAGCGCAAGAGAACAAGGCCAACCAAGAACAAAGAAGAAGTAGAGAGCCAGCGCATGACTCACATTGCTGTTGAACGCAACCGCAGGCGCCAAATGAATGACCATCTCAATGTTCTCAGGTCCCTCATGCCCACATCCTACATTCAAAGGGGTGACCAAGCATCTATTGTGGGGGGTGCAATAGACTTTGTGAAGGAATTGGAGCAGCTGCTTCAATCCCTTGAAGCCCAAAAGAGAATGAGAAGAGCTGATCAAGGGAGCAATGGTGACAACTCTTTTAGCTCATCATCATCATCCTCCTCTGCCAGTATGGCAATGCCATCCAATGGAATGTTCATGTCTCTGTCCCAATGCAGAATTGGGTCTCATGAGGAAGGCACCACCACCACCCACCTTGAGGATGAAGTCACAGCACAGAACAAGTCTGAGGCTGCAGACATAGATGTCACAGTGATCCAAACCCATGTGAACTTAAAAATCCAGTGCCAAAGAAGAGCTGGCCAGTTGATGAAAGCCATTCTTGCATTGGAAGATCTTAGGCTCACAGTTTTGCACCTCAACATTACTTCTTCACAAGATACTGTTCTTTACTCTTTCAATCTCAAGATAGAGGAAGGATGCAAGTTAGGATCTGCAGATGAGATTGCTAGAGCTGTACATCAAATATTCAGCTTCATCGACGGCTGCAGCTGA

Protein Analysis

432

Amino Acids

48.41

Weight (kDa)

5.56

Isoelectric Point (pI)

65.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1046
AccB1I GGYRCC 2 cut(s) 690, 980
AccB7I CCANNNNNTGG 2 cut(s) 346, 929
AciI CCGC 1 cut(s) 685
AclWI GGATC 4 cut(s) 20, 523, 1051, 1240
AcoI YGGCCR 1 cut(s) 1102
AcuI CTGAAG 2 cut(s) 149, 290
AcyI GRCGYC 1 cut(s) 691
AfaI GTAC 2 cut(s) 569, 1260
AfiI CCNNNNNNNGG 4 cut(s) 346, 457, 929, 1000
AgsI TTSAA 7 cut(s) 14, 211, 677, 749, 818, 827, 1201
AjnI CCWGG 2 cut(s) 456, 530
AjuI GAANNNNNNNTTGG 2 cut(s) 920, 952
Alw21I GWGCWC 1 cut(s) 83
Alw26I GTCTC 4 cut(s) 232, 290, 948, 972
AlwI GGATC 4 cut(s) 20, 523, 1051, 1240
AlwNI CAGNNNCTG 1 cut(s) 413
AoxI GGCC 2 cut(s) 620, 1102
ApeKI GCWGC 6 cut(s) 119, 808, 811, 1034, 1287, 1290
AspLEI GCGC 3 cut(s) 609, 657, 693
AspS9I GGNCC 3 cut(s) 17, 385, 723
AsuHPI GGTGA 7 cut(s) 53, 239, 354, 389, 580, 767, 881
AvaII GGWCC 3 cut(s) 17, 385, 723
BalI TGGCCA 1 cut(s) 1104
BanI GGYRCC 2 cut(s) 690, 980
BanII GRGCYC 1 cut(s) 538
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 83
BbvI GCAGC 5 cut(s) 131, 798, 820, 1021, 1274
BccI CCATC 2 cut(s) 714, 931
BciT130I CCWGG 2 cut(s) 458, 532
BclI TGATCA 1 cut(s) 853
BcoDI GTCTC 4 cut(s) 232, 290, 948, 972
BfaI CTAG 2 cut(s) 317, 1251
BfmI CTRYAG 3 cut(s) 1035, 1236, 1288
BfoI RGCGCY 1 cut(s) 694
BglI GCCNNNNNGGC 1 cut(s) 914
BglII AGATCT 1 cut(s) 1135
BisI GCNGC 6 cut(s) 120, 809, 812, 1035, 1288, 1291
BlsI GCNGC 6 cut(s) 121, 810, 813, 1036, 1289, 1292
Bme1390I CCNGG 2 cut(s) 458, 532
Bme18I GGWCC 3 cut(s) 17, 385, 723
BmgT120I GGNCC 3 cut(s) 17, 385, 723
BmiI GGNNCC 4 cut(s) 19, 692, 725, 982
BmrFI CCNGG 2 cut(s) 458, 532
BmrI ACTGGG 1 cut(s) 559
BmsI GCATC 3 cut(s) 456, 773, 1211
BmuI ACTGGG 1 cut(s) 559
BpiI GAAGAC 1 cut(s) 153
BpmI CTGGAG 2 cut(s) 446, 567
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 5 cut(s) 115, 256, 522, 1019, 1190
BsaHI GRCGYC 1 cut(s) 691
BsaI GGTCTC 2 cut(s) 290, 972
BsaJI CCNNGG 3 cut(s) 260, 381, 531
BsaXI ACNNNNNCTCC 2 cut(s) 853, 883
Bsc4I CCNNNNNNNGG 4 cut(s) 346, 457, 929, 1000
Bse1I ACTGG 5 cut(s) 565, 584, 909, 1084, 1105
Bse3DI GCAATG 3 cut(s) 666, 871, 924
BseBI CCWGG 2 cut(s) 458, 532
BseDI CCNNGG 3 cut(s) 260, 381, 531
BseGI GGATG 6 cut(s) 447, 737, 896, 923, 1009, 1226
BseLI CCNNNNNNNGG 4 cut(s) 346, 457, 929, 1000
BseMI GCAATG 3 cut(s) 666, 871, 924
BseMII CTCAG 4 cut(s) 486, 546, 733, 1020
BseNI ACTGG 5 cut(s) 565, 584, 909, 1084, 1105
BseRI GAGGAG 2 cut(s) 510, 892
BseXI GCAGC 5 cut(s) 131, 798, 820, 1021, 1274
BshFI GGCC 2 cut(s) 622, 1104
BshNI GGYRCC 2 cut(s) 690, 980
BsiHKAI GWGCWC 1 cut(s) 83
BslFI GGGAC 2 cut(s) 709, 934
BslI CCNNNNNNNGG 4 cut(s) 346, 457, 929, 1000
BsmAI GTCTC 4 cut(s) 232, 290, 948, 972
BsmFI GGGAC 2 cut(s) 709, 934
BsmI GAATGC 1 cut(s) 358
BsnI GGCC 2 cut(s) 622, 1104
Bso31I GGTCTC 2 cut(s) 290, 972
Bsp1286I GDGCHC 2 cut(s) 83, 538
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
Bsp19I CCATGG 1 cut(s) 260
BspACI CCGC 1 cut(s) 685
BspANI GGCC 2 cut(s) 622, 1104
BspCNI CTCAG 4 cut(s) 485, 547, 732, 1021
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 4 cut(s) 19, 692, 725, 982
BspMAI CTGCAG 3 cut(s) 1039, 1240, 1292
BspPI GGATC 4 cut(s) 20, 523, 1051, 1240
BspQI GCTCTTC 2 cut(s) 841, 1090
BspT107I GGYRCC 2 cut(s) 690, 980
BspTNI GGTCTC 2 cut(s) 290, 972
BsrDI GCAATG 3 cut(s) 666, 871, 924
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 5 cut(s) 565, 584, 909, 1084, 1105
BssECI CCNNGG 3 cut(s) 260, 381, 531
BssMI GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
BssNI GRCGYC 1 cut(s) 691
BssT1I CCWWGG 2 cut(s) 260, 381
Bst2UI CCWGG 2 cut(s) 458, 532
Bst4CI ACNGT 5 cut(s) 181, 488, 1054, 1150, 1186
Bst6I CTCTTC 2 cut(s) 841, 1090
BstACI GRCGYC 1 cut(s) 691
BstAUI TGTACA 1 cut(s) 1258
BstC8I GCNNGC 3 cut(s) 653, 689, 1102
BstDEI CTNAG 6 cut(s) 64, 472, 555, 719, 1029, 1139
BstDSI CCRYGG 1 cut(s) 260
BstEII GGTNACC 1 cut(s) 755
BstF5I GGATG 6 cut(s) 447, 737, 896, 923, 1009, 1226
BstH2I RGCGCY 1 cut(s) 694
BstHHI GCGC 3 cut(s) 609, 657, 693
BstKTI GATC 6 cut(s) 28, 518, 856, 1059, 1138, 1235
BstMAI GTCTC 4 cut(s) 232, 290, 948, 972
BstMBI GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
BstMWI GCNNNNNNNGC 2 cut(s) 914, 1124
BstNI CCWGG 2 cut(s) 458, 532
BstNSI RCATGY 1 cut(s) 286
BstPI GGTNACC 1 cut(s) 755
BstSCI CCNGG 2 cut(s) 456, 530
BstSFI CTRYAG 3 cut(s) 1035, 1236, 1288
BstV1I GCAGC 5 cut(s) 131, 798, 820, 1021, 1274
BstV2I GAAGAC 1 cut(s) 153
BstX2I RGATCY 3 cut(s) 515, 1135, 1232
BstXI CCANNNNNNTGG 1 cut(s) 531
BstYI RGATCY 3 cut(s) 515, 1135, 1232
BsuRI GGCC 2 cut(s) 622, 1104
BtgI CCRYGG 1 cut(s) 260
BtsCI GGATG 6 cut(s) 447, 737, 896, 923, 1009, 1226
BtsIMutI CAGTG 3 cut(s) 65, 1059, 1091
Cac8I GCNNGC 3 cut(s) 653, 689, 1102
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 1 cut(s) 970
CfoI GCGC 3 cut(s) 609, 657, 693
Cfr13I GGNCC 3 cut(s) 17, 385, 723
Csp6I GTAC 2 cut(s) 568, 1259
CspCI CAANNNNNGTGG 2 cut(s) 979, 1014
CviAII CATG 9 cut(s) 261, 283, 341, 346, 658, 730, 940, 971, 1067
CviQI GTAC 2 cut(s) 568, 1259
DdeI CTNAG 6 cut(s) 64, 472, 555, 719, 1029, 1139
DinI GGCGCC 1 cut(s) 692
DpnI GATC 6 cut(s) 27, 517, 855, 1058, 1137, 1234
DpnII GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
DrdI GACNNNNNNGTC 1 cut(s) 1046
DseDI GACNNNNNNGTC 1 cut(s) 1046
EaeI YGGCCR 1 cut(s) 1102
Eam1104I CTCTTC 2 cut(s) 841, 1090
EarI CTCTTC 2 cut(s) 841, 1090
Eco130I CCWWGG 2 cut(s) 260, 381
Eco24I GRGCYC 1 cut(s) 538
Eco31I GGTCTC 2 cut(s) 290, 972
Eco47I GGWCC 3 cut(s) 17, 385, 723
Eco57I CTGAAG 2 cut(s) 149, 290
Eco91I GGTNACC 1 cut(s) 755
EcoO109I RGGNCCY 3 cut(s) 17, 385, 723
EcoO65I GGTNACC 1 cut(s) 755
EcoRII CCWGG 2 cut(s) 456, 530
EcoT14I CCWWGG 2 cut(s) 260, 381
EcoT38I GRGCYC 1 cut(s) 538
EgeI GGCGCC 1 cut(s) 692
EheI GGCGCC 1 cut(s) 692
ErhI CCWWGG 2 cut(s) 260, 381
FaeI CATG 9 cut(s) 264, 286, 344, 349, 661, 733, 943, 974, 1070
FalI AAGNNNNNCTT 2 cut(s) 1107, 1139
FaqI GGGAC 2 cut(s) 709, 934
FatI CATG 9 cut(s) 260, 282, 340, 345, 657, 729, 939, 970, 1066
FbaI TGATCA 1 cut(s) 853
Fnu4HI GCNGC 6 cut(s) 120, 809, 812, 1035, 1288, 1291
FokI GGATG 6 cut(s) 434, 724, 883, 910, 1016, 1233
FriOI GRGCYC 1 cut(s) 538
Fsp4HI GCNGC 6 cut(s) 120, 809, 812, 1035, 1288, 1291
FspBI CTAG 2 cut(s) 317, 1251
GlaI GCGC 3 cut(s) 608, 656, 692
GluI GCNGC 6 cut(s) 120, 809, 812, 1035, 1288, 1291
GsuI CTGGAG 2 cut(s) 446, 567
HaeII RGCGCY 1 cut(s) 694
HaeIII GGCC 2 cut(s) 622, 1104
HhaI GCGC 3 cut(s) 609, 657, 693
Hin1I GRCGYC 1 cut(s) 691
Hin1II CATG 9 cut(s) 264, 286, 344, 349, 661, 733, 943, 974, 1070
Hin6I GCGC 3 cut(s) 607, 655, 691
HinP1I GCGC 3 cut(s) 607, 655, 691
HindIII AAGCTT 3 cut(s) 91, 139, 220
HinfI GANTC 2 cut(s) 256, 661
HphI GGTGA 7 cut(s) 53, 239, 354, 389, 580, 767, 881
Hpy166II GTNNAC 2 cut(s) 184, 1072
Hpy188I TCNGA 5 cut(s) 168, 309, 376, 442, 1030
Hpy188III TCNNGA 5 cut(s) 235, 425, 513, 971, 1207
Hpy8I GTNNAC 2 cut(s) 184, 1072
Hpy99I CGWCG 1 cut(s) 1286
HpyAV CCTTC 5 cut(s) 173, 398, 790, 971, 1211
HpyCH4III ACNGT 5 cut(s) 181, 488, 1054, 1150, 1186
HpyF10VI GCNNNNNNNGC 2 cut(s) 914, 1124
HpyF3I CTNAG 6 cut(s) 64, 472, 555, 719, 1029, 1139
Hsp92I GRCGYC 1 cut(s) 691
Hsp92II CATG 9 cut(s) 264, 286, 344, 349, 661, 733, 943, 974, 1070
HspAI GCGC 3 cut(s) 607, 655, 691
KasI GGCGCC 1 cut(s) 690
Ksp22I TGATCA 1 cut(s) 853
Kzo9I GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
LguI GCTCTTC 2 cut(s) 841, 1090
LmnI GCTCC 2 cut(s) 805, 861
Lsp1109I GCAGC 5 cut(s) 131, 798, 820, 1021, 1274
LweI GCATC 3 cut(s) 456, 773, 1211
MaeI CTAG 2 cut(s) 317, 1251
MaeIII GTNAC 7 cut(s) 171, 334, 586, 755, 869, 1009, 1048
MalI GATC 6 cut(s) 27, 517, 855, 1058, 1137, 1234
MboI GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
MflI RGATCY 3 cut(s) 515, 1135, 1232
MhlI GDGCHC 2 cut(s) 83, 538
MlsI TGGCCA 1 cut(s) 1104
MluCI AATT 3 cut(s) 480, 800, 960
MluNI TGGCCA 1 cut(s) 1104
Mly113I GGCGCC 1 cut(s) 691
MlyI GAGTC 1 cut(s) 655
Mox20I TGGCCA 1 cut(s) 1104
MscI TGGCCA 1 cut(s) 1104
MseI TTAA 3 cut(s) 369, 483, 1076
MslI CAYNNNNRTG 1 cut(s) 711
Msp20I TGGCCA 1 cut(s) 1104
MspA1I CMGCKG 3 cut(s) 476, 811, 1293
MspR9I CCNGG 2 cut(s) 458, 532
Mva1269I GAATGC 1 cut(s) 358
MvaI CCWGG 2 cut(s) 458, 532
MwoI GCNNNNNNNGC 2 cut(s) 914, 1124
NarI GGCGCC 1 cut(s) 691
NcoI CCATGG 1 cut(s) 260
NdeII GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
NlaIII CATG 9 cut(s) 264, 286, 344, 349, 661, 733, 943, 974, 1070
NlaIV GGNNCC 4 cut(s) 19, 692, 725, 982
NmuCI GTSAC 6 cut(s) 334, 586, 755, 869, 1009, 1048
NspI RCATGY 1 cut(s) 286
PagI TCATGA 1 cut(s) 970
PciSI GCTCTTC 2 cut(s) 841, 1090
PctI GAATGC 1 cut(s) 358
PfeI GAWTC 1 cut(s) 256
PflMI CCANNNNNTGG 2 cut(s) 346, 929
PkrI GCNGC 6 cut(s) 121, 810, 813, 1036, 1289, 1292
PleI GAGTC 1 cut(s) 655
PluTI GGCGCC 1 cut(s) 694
PpsI GAGTC 1 cut(s) 655
PpuMI RGGWCCY 3 cut(s) 17, 385, 723
Psp5II RGGWCCY 3 cut(s) 17, 385, 723
Psp6I CCWGG 2 cut(s) 456, 530
PspEI GGTNACC 1 cut(s) 755
PspGI CCWGG 2 cut(s) 456, 530
PspN4I GGNNCC 4 cut(s) 19, 692, 725, 982
PspPI GGNCC 3 cut(s) 17, 385, 723
PspPPI RGGWCCY 3 cut(s) 17, 385, 723
PstI CTGCAG 3 cut(s) 1039, 1240, 1292
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 3 cut(s) 515, 1135, 1232
PvuII CAGCTG 3 cut(s) 476, 811, 1293
RsaI GTAC 2 cut(s) 569, 1260
RsaNI GTAC 2 cut(s) 568, 1259
RseI CAYNNNNRTG 1 cut(s) 711
SapI GCTCTTC 2 cut(s) 841, 1090
SaqAI TTAA 3 cut(s) 369, 483, 1076
SatI GCNGC 6 cut(s) 120, 809, 812, 1035, 1288, 1291
Sau3AI GATC 6 cut(s) 25, 515, 853, 1056, 1135, 1232
Sau96I GGNCC 3 cut(s) 17, 385, 723
SchI GAGTC 1 cut(s) 655
ScrFI CCNGG 2 cut(s) 458, 532
SduI GDGCHC 2 cut(s) 83, 538
SfaNI GCATC 3 cut(s) 456, 773, 1211
SfcI CTRYAG 3 cut(s) 1035, 1236, 1288
SfoI GGCGCC 1 cut(s) 692
SinI GGWCC 3 cut(s) 17, 385, 723
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 5 cut(s) 94, 235, 537, 998, 1205
SmoI CTYRAG 5 cut(s) 94, 235, 537, 998, 1205
Sse9I AATT 3 cut(s) 480, 800, 960
SsiI CCGC 1 cut(s) 685
SspDI GGCGCC 1 cut(s) 690
SspI AATATT 1 cut(s) 1269
SspMI CTAG 2 cut(s) 317, 1251
StyD4I CCNGG 2 cut(s) 456, 530
StyI CCWWGG 2 cut(s) 260, 381
TaaI ACNGT 5 cut(s) 181, 488, 1054, 1150, 1186
TaqI TCGA 1 cut(s) 1281
TasI AATT 3 cut(s) 480, 800, 960
TatI WGTACW 1 cut(s) 1258
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 3 cut(s) 369, 483, 1076
Tru9I TTAA 3 cut(s) 369, 483, 1076
TscAI CASTG 3 cut(s) 65, 1059, 1091
TseFI GTSAC 6 cut(s) 334, 586, 755, 869, 1009, 1048
TseI GCWGC 6 cut(s) 119, 808, 811, 1034, 1287, 1290
Tsp45I GTSAC 6 cut(s) 334, 586, 755, 869, 1009, 1048
TspDTI ATGAA 7 cut(s) 380, 564, 713, 928, 1020, 1127, 1267
TspRI CASTG 3 cut(s) 65, 1059, 1091
Van91I CCANNNNNTGG 2 cut(s) 346, 929
VpaK11BI GGWCC 3 cut(s) 17, 385, 723
XceI RCATGY 1 cut(s) 286
XcmI CCANNNNNNNNNTGG 3 cut(s) 959, 1097, 1126
XspI CTAG 2 cut(s) 317, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.