pycom07g15680

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
18135330 .. 18137475
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g15680.4

Sequence Viewer

Length: 1290 bp
ATGGAAAGGCTAGTTCAAGGACCCATTAATCCCTGTCAGTCCTTTGGTGAGCATTTGGATTTTCAGTTGGAGCAAAGTTTGAATTTCACCACTGAAAGCTTGAGCTTTGAGGAGGAAGAAGAATCCCACCACCACCTCCTAATGCCAAGCTTGGAGGACAGAATGCCATTTCTCCAGATGCTACAAAGTGTTAATTCCTCCACCACCACCACTACACCTTATTTTCCATTGAAAGAGCCAAGCTTTCAAACACTTTTGAAACTCCAACACTTCAAAAAGCCATGGGAGTTGGACGAAACTTACATGCCTGAAATGGAAACCACAATTCAGAGAGCTCCGGAACTTGAGAGCTGTGTGACCCATGAAATGGTTGAGCTGCAACATTCACCTGTGAAATCAGAAGGGAAAGACTTTCATCTCCAACACTCGATTTCTGAGTGCAACCAAGGGGAAGAAAAGCCCAGCTCAGCTGCTGGGTCTCCACCCCTACCTACCTGGGTTCAGGTACATAATGGTGCTGAGGAAACCCAGCAACCCAAATCTCCTGCCACCAGGGAGAGGAGAAAGCGGAAGAGAACAAGGCCAACTAAGAACAAGGAAGAAGTGGAGAGCCAGCGGATGACCCACATAGCGGTGGAGCGCAACCGTCGCCGCCAGATGAATGACCATCTCAATGTCCTCAGGTCCCTCATGCCCACTTCTTACATTCAAAGGGGTGACCAAGCATCAATTGTGGGGGGTGCAATAGATTTTGTGAAGGAATTGGAGCACCTACTTCATTCCCTTGAAGCCCAAAAAAGAAATAGAAAAACAGCTGATCAAATTCAAGGGATGAACAATAATAGTAACAACAGCTCTTTCAGCTCCTCACCAGCATCCTCCTCTTCTCCCTGCAGCATGGCAATGCCATCCAATGGAATGTTCATGACTCTATCCCAGTGCAGAATTGGTTCTCATGATCAAGAAGGCACCACCGCCATCGCCACCGCCTTTGAGGATGAAGGCACAGCTCAGAACAAGTATGAGGCTGCAGACATAGATGTCACTGTGATCCAATCTCATGTCAACTTAAAAGTCCAGTGCCAAAGGAGAGCTGGCCAGCTGATGAAAGCCATCCTTGCATTGGAGGATCTTAGGCTAACTGTTTTGCACCTCAACATTACATCTTCACAAGACACTGTTCTTTACTCTTTCAATCTCAAGATAGAAGAAGGTTGTCATTTAGGATCAGCAGATGACATTGCAAGAGCCGTGCATCAGATATTCAACTTCATCAATGGCAGCAGTTGA

Protein Analysis

430

Amino Acids

48.44

Weight (kDa)

5.76

Isoelectric Point (pI)

62.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1040
AccB1I GGYRCC 1 cut(s) 968
AccB7I CCANNNNNTGG 2 cut(s) 367, 914
AccIII TCCGGA 1 cut(s) 337
AciI CCGC 6 cut(s) 568, 616, 632, 652, 975, 987
AclWI GGATC 3 cut(s) 1045, 1137, 1234
AcoI YGGCCR 1 cut(s) 1096
AcsI RAATTY 2 cut(s) 82, 822
AfaI GTAC 1 cut(s) 507
AfiI CCNNNNNNNGG 5 cut(s) 367, 558, 631, 914, 1123
AjnI CCWGG 2 cut(s) 494, 551
AjuI GAANNNNNNNTTGG 2 cut(s) 905, 937
Alw21I GWGCWC 2 cut(s) 337, 771
Alw26I GTCTC 1 cut(s) 483
AlwI GGATC 3 cut(s) 1045, 1137, 1234
AlwNI CAGNNNCTG 1 cut(s) 473
Aor13HI TCCGGA 1 cut(s) 337
AoxI GGCC 2 cut(s) 581, 1096
ApeKI GCWGC 5 cut(s) 376, 470, 894, 1028, 1281
ApoI RAATTY 2 cut(s) 82, 822
AseI ATTAAT 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 949
AspLEI GCGC 1 cut(s) 642
AspS9I GGNCC 2 cut(s) 20, 684
AsuHPI GGTGA 5 cut(s) 59, 79, 378, 728, 861
AvaII GGWCC 2 cut(s) 20, 684
AxyI CCTNAGG 1 cut(s) 680
BalI TGGCCA 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 968
BanII GRGCYC 1 cut(s) 337
Bbv12I GWGCWC 2 cut(s) 337, 771
BbvCI CCTCAGC 1 cut(s) 519
BbvI GCAGC 4 cut(s) 363, 457, 906, 1015
BccI CCATC 4 cut(s) 675, 916, 986, 1121
BceAI ACGGC 1 cut(s) 1235
BciT130I CCWGG 2 cut(s) 496, 553
BclI TGATCA 2 cut(s) 817, 958
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 1 cut(s) 11
BfmI CTRYAG 2 cut(s) 892, 1029
BisI GCNGC 6 cut(s) 377, 471, 652, 895, 1029, 1282
BlpI GCTNAGC 1 cut(s) 466
BlsI GCNGC 6 cut(s) 378, 472, 653, 896, 1030, 1283
Bme1390I CCNGG 2 cut(s) 496, 553
Bme18I GGWCC 2 cut(s) 20, 684
BmgT120I GGNCC 2 cut(s) 20, 684
BmiI GGNNCC 3 cut(s) 22, 686, 970
BmrFI CCNGG 2 cut(s) 496, 553
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 4 cut(s) 168, 734, 884, 1264
BmuI ACTGGG 1 cut(s) 931
BpmI CTGGAG 1 cut(s) 158
Bpu10I CCTNAGC 1 cut(s) 519
Bpu1102I GCTNAGC 1 cut(s) 466
BpuEI CTTGAG 3 cut(s) 121, 365, 1184
BsaI GGTCTC 1 cut(s) 483
BsaJI CCNNGG 4 cut(s) 281, 445, 495, 552
BsaWI WCCGGW 1 cut(s) 337
Bsc4I CCNNNNNNNGG 5 cut(s) 367, 558, 631, 914, 1123
Bse1I ACTGG 2 cut(s) 937, 1078
Bse21I CCTNAGG 1 cut(s) 680
Bse3DI GCAATG 2 cut(s) 909, 1239
BseAI TCCGGA 1 cut(s) 337
BseBI CCWGG 2 cut(s) 496, 553
BseDI CCNNGG 4 cut(s) 281, 445, 495, 552
BseGI GGATG 6 cut(s) 624, 837, 875, 908, 1003, 1113
BseLI CCNNNNNNNGG 5 cut(s) 367, 558, 631, 914, 1123
BseMI GCAATG 2 cut(s) 909, 1239
BseMII CTCAG 5 cut(s) 426, 480, 510, 694, 1025
BseNI ACTGG 2 cut(s) 937, 1078
BseRI GAGGAG 4 cut(s) 125, 574, 856, 871
BseXI GCAGC 4 cut(s) 363, 457, 906, 1015
BseYI CCCAGC 3 cut(s) 461, 473, 528
BsgI GTGCAG 1 cut(s) 961
BshFI GGCC 2 cut(s) 583, 1098
BshNI GGYRCC 1 cut(s) 968
BsiHKAI GWGCWC 2 cut(s) 337, 771
BsiSI CCGG 1 cut(s) 338
BslFI GGGAC 1 cut(s) 670
BslI CCNNNNNNNGG 5 cut(s) 367, 558, 631, 914, 1123
BsmAI GTCTC 1 cut(s) 483
BsmFI GGGAC 1 cut(s) 670
BsmI GAATGC 1 cut(s) 168
BsnI GGCC 2 cut(s) 583, 1098
Bso31I GGTCTC 1 cut(s) 483
Bsp1286I GDGCHC 2 cut(s) 337, 771
Bsp13I TCCGGA 1 cut(s) 337
Bsp143I GATC 5 cut(s) 817, 958, 1050, 1129, 1226
Bsp1720I GCTNAGC 1 cut(s) 466
Bsp19I CCATGG 1 cut(s) 281
BspACI CCGC 6 cut(s) 568, 616, 632, 652, 975, 987
BspANI GGCC 2 cut(s) 583, 1098
BspCNI CTCAG 5 cut(s) 427, 479, 511, 693, 1024
BspEI TCCGGA 1 cut(s) 337
BspHI TCATGA 2 cut(s) 924, 955
BspLI GGNNCC 3 cut(s) 22, 686, 970
BspMAI CTGCAG 2 cut(s) 896, 1033
BspPI GGATC 3 cut(s) 1045, 1137, 1234
BspT107I GGYRCC 1 cut(s) 968
BspTNI GGTCTC 1 cut(s) 483
BsrDI GCAATG 2 cut(s) 909, 1239
BsrI ACTGG 2 cut(s) 937, 1078
BssECI CCNNGG 4 cut(s) 281, 445, 495, 552
BssMI GATC 5 cut(s) 817, 958, 1050, 1129, 1226
BssT1I CCWWGG 2 cut(s) 281, 445
Bst2UI CCWGG 2 cut(s) 496, 553
Bst4CI ACNGT 4 cut(s) 647, 1048, 1144, 1180
Bst6I CTCTTC 2 cut(s) 566, 889
BstC8I GCNNGC 3 cut(s) 614, 1096, 1100
BstDEI CTNAG 7 cut(s) 435, 466, 519, 588, 680, 1011, 1133
BstDSI CCRYGG 1 cut(s) 281
BstEII GGTNACC 1 cut(s) 716
BstF5I GGATG 6 cut(s) 624, 837, 875, 908, 1003, 1113
BstHHI GCGC 1 cut(s) 642
BstKTI GATC 5 cut(s) 820, 961, 1053, 1132, 1229
BstMAI GTCTC 1 cut(s) 483
BstMBI GATC 5 cut(s) 817, 958, 1050, 1129, 1226
BstMWI GCNNNNNNNGC 3 cut(s) 648, 861, 1118
BstNI CCWGG 2 cut(s) 496, 553
BstNSI RCATGY 1 cut(s) 307
BstPI GGTNACC 1 cut(s) 716
BstSCI CCNGG 2 cut(s) 494, 551
BstSFI CTRYAG 2 cut(s) 892, 1029
BstV1I GCAGC 4 cut(s) 363, 457, 906, 1015
BstX2I RGATCY 1 cut(s) 1129
BstYI RGATCY 1 cut(s) 1129
Bsu36I CCTNAGG 1 cut(s) 680
BsuRI GGCC 2 cut(s) 583, 1098
BtgI CCRYGG 1 cut(s) 281
BtgZI GCGATG 1 cut(s) 964
BtsCI GGATG 6 cut(s) 624, 837, 875, 908, 1003, 1113
BtsIMutI CAGTG 5 cut(s) 90, 944, 1044, 1085, 1176
Cac8I GCNNGC 3 cut(s) 614, 1096, 1100
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 2 cut(s) 924, 955
CfoI GCGC 1 cut(s) 642
Cfr13I GGNCC 2 cut(s) 20, 684
Csp6I GTAC 1 cut(s) 506
CspCI CAANNNNNGTGG 2 cut(s) 973, 1008
CviAII CATG 8 cut(s) 282, 304, 362, 691, 898, 925, 956, 1061
CviQI GTAC 1 cut(s) 506
DdeI CTNAG 7 cut(s) 435, 466, 519, 588, 680, 1011, 1133
DpnI GATC 5 cut(s) 819, 960, 1052, 1131, 1228
DpnII GATC 5 cut(s) 817, 958, 1050, 1129, 1226
DrdI GACNNNNNNGTC 1 cut(s) 1040
DseDI GACNNNNNNGTC 1 cut(s) 1040
EaeI YGGCCR 1 cut(s) 1096
Eam1104I CTCTTC 2 cut(s) 566, 889
EarI CTCTTC 2 cut(s) 566, 889
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 2 cut(s) 281, 445
Eco24I GRGCYC 1 cut(s) 337
Eco31I GGTCTC 1 cut(s) 483
Eco47I GGWCC 2 cut(s) 20, 684
Eco53kI GAGCTC 1 cut(s) 335
Eco81I CCTNAGG 1 cut(s) 680
Eco91I GGTNACC 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 335
EcoO109I RGGNCCY 2 cut(s) 20, 684
EcoO65I GGTNACC 1 cut(s) 716
EcoRII CCWGG 2 cut(s) 494, 551
EcoT14I CCWWGG 2 cut(s) 281, 445
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 2 cut(s) 281, 445
FaeI CATG 8 cut(s) 285, 307, 365, 694, 901, 928, 959, 1064
FalI AAGNNNNNCTT 2 cut(s) 1101, 1133
FaqI GGGAC 1 cut(s) 670
FatI CATG 8 cut(s) 281, 303, 361, 690, 897, 924, 955, 1060
FbaI TGATCA 2 cut(s) 817, 958
Fnu4HI GCNGC 6 cut(s) 377, 471, 652, 895, 1029, 1282
FokI GGATG 6 cut(s) 631, 844, 862, 895, 1010, 1100
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 6 cut(s) 377, 471, 652, 895, 1029, 1282
FspBI CTAG 1 cut(s) 11
GlaI GCGC 1 cut(s) 641
GluI GCNGC 6 cut(s) 377, 471, 652, 895, 1029, 1282
GsaI CCCAGC 3 cut(s) 465, 477, 532
GsuI CTGGAG 1 cut(s) 158
HaeIII GGCC 2 cut(s) 583, 1098
HapII CCGG 1 cut(s) 338
HhaI GCGC 1 cut(s) 642
Hin1II CATG 8 cut(s) 285, 307, 365, 694, 901, 928, 959, 1064
Hin6I GCGC 1 cut(s) 640
HinP1I GCGC 1 cut(s) 640
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HindIII AAGCTT 3 cut(s) 97, 148, 241
HinfI GANTC 2 cut(s) 122, 928
HpaII CCGG 1 cut(s) 338
HphI GGTGA 5 cut(s) 59, 79, 378, 728, 861
Hpy166II GTNNAC 1 cut(s) 1066
Hpy188I TCNGA 5 cut(s) 330, 400, 436, 1014, 1260
Hpy188III TCNNGA 6 cut(s) 175, 338, 925, 956, 962, 1201
Hpy8I GTNNAC 1 cut(s) 1066
Hpy99I CGWCG 1 cut(s) 651
HpyAV CCTTC 5 cut(s) 395, 751, 959, 995, 1205
HpyCH4III ACNGT 4 cut(s) 647, 1048, 1144, 1180
HpyF10VI GCNNNNNNNGC 3 cut(s) 648, 861, 1118
HpyF3I CTNAG 7 cut(s) 435, 466, 519, 588, 680, 1011, 1133
Hsp92II CATG 8 cut(s) 285, 307, 365, 694, 901, 928, 959, 1064
HspAI GCGC 1 cut(s) 640
Kpn2I TCCGGA 1 cut(s) 337
Ksp22I TGATCA 2 cut(s) 817, 958
Kzo9I GATC 5 cut(s) 817, 958, 1050, 1129, 1226
LmnI GCTCC 5 cut(s) 70, 340, 637, 766, 869
Lsp1109I GCAGC 4 cut(s) 363, 457, 906, 1015
LweI GCATC 4 cut(s) 168, 734, 884, 1264
MaeI CTAG 1 cut(s) 11
MaeIII GTNAC 4 cut(s) 355, 716, 845, 1042
MalI GATC 5 cut(s) 819, 960, 1052, 1131, 1228
MboI GATC 5 cut(s) 817, 958, 1050, 1129, 1226
MboII GAAGA 8 cut(s) 128, 131, 464, 583, 611, 876, 1158, 1220
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 1 cut(s) 1129
MhlI GDGCHC 2 cut(s) 337, 771
MlsI TGGCCA 1 cut(s) 1098
MluCI AATT 7 cut(s) 82, 193, 324, 729, 761, 822, 945
MluNI TGGCCA 1 cut(s) 1098
MlyI GAGTC 1 cut(s) 922
MmeI TCCRAC 4 cut(s) 48, 270, 289, 445
Mox20I TGGCCA 1 cut(s) 1098
MroI TCCGGA 1 cut(s) 337
MroXI GAANNNNTTC 1 cut(s) 949
MscI TGGCCA 1 cut(s) 1098
MseI TTAA 3 cut(s) 27, 192, 1070
MslI CAYNNNNRTG 4 cut(s) 513, 632, 672, 902
Msp20I TGGCCA 1 cut(s) 1098
MspA1I CMGCKG 4 cut(s) 470, 616, 815, 1102
MspI CCGG 1 cut(s) 338
MspR9I CCNGG 2 cut(s) 496, 553
MunI CAATTG 1 cut(s) 729
Mva1269I GAATGC 1 cut(s) 168
MvaI CCWGG 2 cut(s) 496, 553
MwoI GCNNNNNNNGC 3 cut(s) 648, 861, 1118
NcoI CCATGG 1 cut(s) 281
NdeII GATC 5 cut(s) 817, 958, 1050, 1129, 1226
NlaIII CATG 8 cut(s) 285, 307, 365, 694, 901, 928, 959, 1064
NlaIV GGNNCC 3 cut(s) 22, 686, 970
NmuCI GTSAC 3 cut(s) 355, 716, 1042
NspI RCATGY 1 cut(s) 307
PagI TCATGA 2 cut(s) 924, 955
PctI GAATGC 1 cut(s) 168
PdmI GAANNNNTTC 1 cut(s) 949
PfeI GAWTC 1 cut(s) 122
PflMI CCANNNNNTGG 2 cut(s) 367, 914
PkrI GCNGC 6 cut(s) 378, 472, 653, 896, 1030, 1283
PleI GAGTC 1 cut(s) 922
PpsI GAGTC 1 cut(s) 922
PpuMI RGGWCCY 2 cut(s) 20, 684
PshBI ATTAAT 1 cut(s) 27
Psp124BI GAGCTC 1 cut(s) 337
Psp5II RGGWCCY 2 cut(s) 20, 684
Psp6I CCWGG 2 cut(s) 494, 551
PspEI GGTNACC 1 cut(s) 716
PspFI CCCAGC 3 cut(s) 461, 473, 528
PspGI CCWGG 2 cut(s) 494, 551
PspN4I GGNNCC 3 cut(s) 22, 686, 970
PspPI GGNCC 2 cut(s) 20, 684
PspPPI RGGWCCY 2 cut(s) 20, 684
PstI CTGCAG 2 cut(s) 896, 1033
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 1 cut(s) 1129
PvuII CAGCTG 3 cut(s) 470, 815, 1102
RsaI GTAC 1 cut(s) 507
RsaNI GTAC 1 cut(s) 506
RseI CAYNNNNRTG 4 cut(s) 513, 632, 672, 902
SacI GAGCTC 1 cut(s) 337
SaqAI TTAA 3 cut(s) 27, 192, 1070
SatI GCNGC 6 cut(s) 377, 471, 652, 895, 1029, 1282
Sau3AI GATC 5 cut(s) 817, 958, 1050, 1129, 1226
Sau96I GGNCC 2 cut(s) 20, 684
SchI GAGTC 1 cut(s) 922
ScrFI CCNGG 2 cut(s) 496, 553
SduI GDGCHC 2 cut(s) 337, 771
SfaNI GCATC 4 cut(s) 168, 734, 884, 1264
SfcI CTRYAG 2 cut(s) 892, 1029
SinI GGWCC 2 cut(s) 20, 684
SmiMI CAYNNNNRTG 4 cut(s) 513, 632, 672, 902
SmlI CTYRAG 3 cut(s) 100, 344, 1199
SmoI CTYRAG 3 cut(s) 100, 344, 1199
Sse9I AATT 7 cut(s) 82, 193, 324, 729, 761, 822, 945
SsiI CCGC 6 cut(s) 568, 616, 632, 652, 975, 987
SspMI CTAG 1 cut(s) 11
SstI GAGCTC 1 cut(s) 337
StyD4I CCNGG 2 cut(s) 494, 551
StyI CCWWGG 2 cut(s) 281, 445
TaaI ACNGT 4 cut(s) 647, 1048, 1144, 1180
TaqI TCGA 1 cut(s) 428
TasI AATT 7 cut(s) 82, 193, 324, 729, 761, 822, 945
TauI GCSGC 1 cut(s) 654
TfiI GAWTC 1 cut(s) 122
Tru1I TTAA 3 cut(s) 27, 192, 1070
Tru9I TTAA 3 cut(s) 27, 192, 1070
TscAI CASTG 5 cut(s) 97, 944, 1051, 1085, 1183
TseFI GTSAC 3 cut(s) 355, 716, 1042
TseI GCWGC 5 cut(s) 376, 470, 894, 1028, 1281
Tsp45I GTSAC 3 cut(s) 355, 716, 1042
TspDTI ATGAA 9 cut(s) 378, 404, 674, 767, 848, 913, 1014, 1121, 1261
TspRI CASTG 5 cut(s) 97, 944, 1051, 1085, 1183
Van91I CCANNNNNTGG 2 cut(s) 367, 914
VpaK11BI GGWCC 2 cut(s) 20, 684
VspI ATTAAT 1 cut(s) 27
XapI RAATTY 2 cut(s) 82, 822
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 3 cut(s) 944, 1091, 1120
XmnI GAANNNNTTC 1 cut(s) 949
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.