Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0003385

Physical Location & Seq

Genomic Coordinates Reverse (-)

14638223 .. 14641224

Gene Structure 3002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027740

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGCATCAGACTCAAAACAATCTGATGAGAGATCGTTGTCATGATGAAACTGAGAAATCACTTGCCTCCCAAGAGCTTCAACATGTTATGGACGGGACGCCTTCTCCCCCGAAGTTCTTTGGAGACCATTTGGATTTGCAGTGCTTAGAGCAAGGATTCACCACCACCACCACCACCACCATACATGGCTTGAGATTTGAGGAAGAAGAAGAAGCACTGTACCTCTCAGGCTTCGAAGATAGAATGCCATTTCTTCAGATGCTACAAAGCATTGATTTCCCCCCGTGTGATTTCACTCAAAAAGAGCCAAGCTTTCAAGCACTGTTGAGATTACAGCACAAGACCGGTACAACTTGGCCTGAAATGGAAAATACCCGAAGTTCCCAAATTCACTCACTTGAGGCACTTGAGAGCTGTGTAACTCAAGACAATCAACAACAGTTGTATTCACCAGCAAAATCTGAAGGAAGAGACCCTCACCAAAACCCTCTTTCAGTTTCTGGTACTCTTGAGGGTGGTGGTGGTGTGAGCTCAGATTGCAACCAAGAAATGCAACAACTCAACTCAGCAAAAATGGGTCCTAACCAGACCCAGACCCAGTTCACCAAGTCGGCTTCTTCTCCGGCCACCCGAGAGAGACGAAAGCGCAAGAGAACAAGACCAACCAAGAACAAAGAGGAAGTAGAGAGCCAGAGAATGACCCACATTGCTGTTGAGCGCAACCGCAGACGCCAAATGAATGACCATCTCAATGGTCTCAGATCCCTCATGCCCCCTTCCTACATTCAAAGGGGTGACCAAGCATCCATAGTTGGGGGTGCAATAGACTTTGTGAAGGAATTGGAGCAGCATCTTCAGTCCCTTGAAGCCCAAAAGAGAATGAAAAGAGCTAAAGGCTTCACCACCAATGTTGACCCTAACAATAACAACTCCTTGAACTCATCTTCACCATCTTCATCATCTGCCATGGCAATGCCTTCAAATGGGATGTTCATGTCTCTCTCCCAATGCAGAATCGCGTCTACTGAGGAAGGAAACACTTGTGGGGATGATGGAGTCACAGCACAAAACAAGTCTGAGGCTGCAGAAGTGGATGTCACAGTGATCCAAACCCATGTGAACTTGAAGGTCCAGTGTCAAAAGAGGCCTGGCCAGTTGGTGAGAGCCCTTATTGCCTTGGAAGATCTCAGGCTAACAGTTTTGCACCTCAACATTACTTCTTCAGAAGACAAGGTTCTTTACTCTTTCAATCTCAAGATTGAGGAGGGATGTAAGTTAGGATCAGCAGAAAACATTGCCAGAGCAGTACACCAAATATTCAGATTCATCAATGGCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

447

Amino Acids

49.96

Weight (kDa)

6.19

Isoelectric Point (pI)

62.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	231 - 282	3.2e-12	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	363 - 440	3.5e-10	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46810 AT2G46810 AT2G46810 AT2G46810 AT3G61950 AT3G61950 AT3G61950 AT3G61950 AT3G61950 AT3G61950 AT4G01460 AT4G01460
fragaria_vesca	FvH4_7g13190 FvH4_7g13190 FvH4_7g13190 FvH4_7g13190 FvH4_7g13190 FvH4_7g17790 FvH4_7g17790 FvH4_7g17790
malus_domestica	MD01G1089300.v1.1 MD07G1160700.v1.1
prunus_persica	Prupe.2G198800_v2.0.a1 Prupe.2G198800_v2.0.a1
pyrus_communis	pycom01g11350 pycom07g15680
rosa_chinensis	RchiOBHm_Chr1g0361191
rosa_laevigata	RLG00000027740
rosa_multiflora	Rmu_sc0007111.1_g000017
rosa_roxburghii	Rroxscaffold_4G00295280
rosa_rugosa	Rorug01G0287400.1
rosa_samantha	Rh1AG298300 Rh1BG262200 Rh1CG279600 Rh1DG292400
rosa_wichuraiana	Rw1G026370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1022
AccII	CGCG	1 cut(s)	1019
AciI	CCGC	1 cut(s)	724
AclWI	GGATC	3 cut(s)	756, 1099, 1288
AcoI	YGGCCR	2 cut(s)	624, 1150
AcsI	RAATTY	1 cut(s)	387
AcuI	CTGAAG	4 cut(s)	239, 483, 839, 1206
AcyI	GRCGYC	2 cut(s)	98, 730
AfaI	GTAC	4 cut(s)	221, 349, 505, 1308
AfiI	CCNNNNNNNGG	2 cut(s)	813, 983
AflIII	ACRYGT	1 cut(s)	82
AgeI	ACCGGT	1 cut(s)	344
AgsI	TTSAA	8 cut(s)	80, 317, 788, 866, 937, 981, 1126, 1249
AjnI	CCWGG	1 cut(s)	1147
AluBI	AGCT	6 cut(s)	76, 312, 414, 531, 890, 1338
AluI	AGCT	6 cut(s)	76, 312, 414, 531, 890, 1338
Alw21I	GWGCWC	1 cut(s)	533
Alw26I	GTCTC	5 cut(s)	117, 465, 631, 761, 1002
AlwI	GGATC	3 cut(s)	756, 1099, 1288
AlwNI	CAGNNNCTG	1 cut(s)	500
Ama87I	CYCGRG	1 cut(s)	630
AoxI	GGCC	4 cut(s)	356, 624, 1145, 1150
ApeKI	GCWGC	3 cut(s)	847, 1082, 1335
ApoI	RAATTY	1 cut(s)	387
AsiGI	ACCGGT	1 cut(s)	344
AspLEI	GCGC	2 cut(s)	648, 720
AspS9I	GGNCC	2 cut(s)	578, 1129
AsuHPI	GGTGA	8 cut(s)	151, 441, 470, 595, 806, 892, 939, 1171
AsuII	TTCGAA	1 cut(s)	234
AvaI	CYCGRG	1 cut(s)	630
AvaII	GGWCC	2 cut(s)	578, 1129
BalI	TGGCCA	1 cut(s)	1152
BanII	GRGCYC	2 cut(s)	533, 1168
BbsI	GAAGAC	1 cut(s)	1233
Bbv12I	GWGCWC	1 cut(s)	533
BbvI	GCAGC	2 cut(s)	859, 1069
BccI	CCATC	3 cut(s)	753, 958, 1046
BciT130I	CCWGG	1 cut(s)	1149
BcoDI	GTCTC	5 cut(s)	117, 465, 631, 761, 1002
BfmI	CTRYAG	1 cut(s)	1083
BglII	AGATCT	1 cut(s)	1183
BisI	GCNGC	3 cut(s)	848, 1083, 1336
BlsI	GCNGC	3 cut(s)	849, 1084, 1337
Bme1390I	CCNGG	1 cut(s)	1149
Bme18I	GGWCC	2 cut(s)	578, 1129
BmeT110I	CYCGRG	1 cut(s)	630
BmgT120I	GGNCC	2 cut(s)	578, 1129
BmiI	GGNNCC	1 cut(s)	579
BmrFI	CCNGG	1 cut(s)	1149
BmrI	ACTGGG	1 cut(s)	592
BmsI	GCATC	4 cut(s)	13, 249, 812, 859
BmuI	ACTGGG	1 cut(s)	592
BpiI	GAAGAC	1 cut(s)	1233
Bpu14I	TTCGAA	1 cut(s)	234
BpuEI	CTTGAG	6 cut(s)	211, 408, 419, 428, 530, 1238
BsaHI	GRCGYC	2 cut(s)	98, 730
BsaI	GGTCTC	3 cut(s)	117, 465, 761
BsaJI	CCNNGG	2 cut(s)	966, 1176
BsaWI	WCCGGW	1 cut(s)	344
BsaXI	ACNNNNNCTCC	2 cut(s)	88, 118
Bsc4I	CCNNNNNNNGG	2 cut(s)	813, 983
Bse118I	RCCGGY	1 cut(s)	344
Bse1I	ACTGG	3 cut(s)	598, 1132, 1153
Bse3DI	GCAATG	3 cut(s)	705, 978, 1293
BseBI	CCWGG	1 cut(s)	1149
BseDI	CCNNGG	2 cut(s)	966, 1176
BseGI	GGATG	5 cut(s)	803, 993, 1054, 1099, 1274
BseLI	CCNNNNNNNGG	2 cut(s)	813, 983
BseMI	GCAATG	3 cut(s)	705, 978, 1293
BseMII	CTCAG	8 cut(s)	42, 240, 546, 579, 772, 1017, 1068, 1201
BseNI	ACTGG	3 cut(s)	598, 1132, 1153
BseRI	GAGGAG	1 cut(s)	1277
BseXI	GCAGC	2 cut(s)	859, 1069
Bsh1236I	CGCG	1 cut(s)	1019
BshFI	GGCC	4 cut(s)	358, 626, 1147, 1152
BshTI	ACCGGT	1 cut(s)	344
BsiHKAI	GWGCWC	1 cut(s)	533
BsiHKCI	CYCGRG	1 cut(s)	630
BsiSI	CCGG	2 cut(s)	345, 623
BslFI	GGGAC	2 cut(s)	109, 844
BslI	CCNNNNNNNGG	2 cut(s)	813, 983
BsmAI	GTCTC	5 cut(s)	117, 465, 631, 761, 1002
BsmBI	CGTCTC	1 cut(s)	631
BsmFI	GGGAC	2 cut(s)	109, 844
BsmI	GAATGC	1 cut(s)	249
BsnI	GGCC	4 cut(s)	358, 626, 1147, 1152
Bso31I	GGTCTC	3 cut(s)	117, 465, 761
BsoBI	CYCGRG	1 cut(s)	630
Bsp119I	TTCGAA	1 cut(s)	234
Bsp1286I	GDGCHC	2 cut(s)	533, 1168
Bsp143I	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
Bsp19I	CCATGG	1 cut(s)	966
BspACI	CCGC	1 cut(s)	724
BspANI	GGCC	4 cut(s)	358, 626, 1147, 1152
BspCNI	CTCAG	8 cut(s)	43, 239, 545, 578, 771, 1018, 1069, 1200
BspFNI	CGCG	1 cut(s)	1019
BspHI	TCATGA	1 cut(s)	40
BspLI	GGNNCC	1 cut(s)	579
BspMAI	CTGCAG	1 cut(s)	1087
BspPI	GGATC	3 cut(s)	756, 1099, 1288
BspT104I	TTCGAA	1 cut(s)	234
BspTNI	GGTCTC	3 cut(s)	117, 465, 761
BsrDI	GCAATG	3 cut(s)	705, 978, 1293
BsrFI	RCCGGY	1 cut(s)	344
BsrI	ACTGG	3 cut(s)	598, 1132, 1153
BssAI	RCCGGY	1 cut(s)	344
BssECI	CCNNGG	2 cut(s)	966, 1176
BssMI	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
BssNI	GRCGYC	2 cut(s)	98, 730
BssT1I	CCWWGG	2 cut(s)	966, 1176
Bst2UI	CCWGG	1 cut(s)	1149
Bst4CI	ACNGT	5 cut(s)	219, 324, 441, 1102, 1198
Bst6I	CTCTTC	1 cut(s)	463
BstACI	GRCGYC	2 cut(s)	98, 730
BstBI	TTCGAA	1 cut(s)	234
BstDEI	CTNAG	9 cut(s)	51, 145, 226, 532, 565, 758, 1026, 1077, 1187
BstDSI	CCRYGG	1 cut(s)	966
BstEII	GGTNACC	1 cut(s)	794
BstF5I	GGATG	5 cut(s)	803, 993, 1054, 1099, 1274
BstFNI	CGCG	1 cut(s)	1019
BstHHI	GCGC	2 cut(s)	648, 720
BstKTI	GATC	5 cut(s)	34, 764, 1107, 1186, 1283
BstMAI	GTCTC	5 cut(s)	117, 465, 631, 761, 1002
BstMBI	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
BstMWI	GCNNNNNNNGC	2 cut(s)	537, 1172
BstNI	CCWGG	1 cut(s)	1149
BstNSI	RCATGY	1 cut(s)	86
BstPI	GGTNACC	1 cut(s)	794
BstSCI	CCNGG	1 cut(s)	1147
BstSFI	CTRYAG	1 cut(s)	1083
BstUI	CGCG	1 cut(s)	1019
BstV1I	GCAGC	2 cut(s)	859, 1069
BstV2I	GAAGAC	1 cut(s)	1233
BstX2I	RGATCY	2 cut(s)	761, 1183
BstXI	CCANNNNNNTGG	1 cut(s)	752
BstYI	RGATCY	2 cut(s)	761, 1183
BsuRI	GGCC	4 cut(s)	358, 626, 1147, 1152
BtgI	CCRYGG	1 cut(s)	966
BtsCI	GGATG	5 cut(s)	803, 993, 1054, 1099, 1274
BtsI	GCAGTG	1 cut(s)	146
BtsIMutI	CAGTG	5 cut(s)	146, 215, 320, 1107, 1139
CaiI	CAGNNNCTG	1 cut(s)	500
CciI	TCATGA	1 cut(s)	40
CfoI	GCGC	2 cut(s)	648, 720
Cfr10I	RCCGGY	1 cut(s)	344
Cfr13I	GGNCC	2 cut(s)	578, 1129
CseI	GACGC	3 cut(s)	106, 738, 1008
Csp6I	GTAC	4 cut(s)	220, 348, 504, 1307
CspAI	ACCGGT	1 cut(s)	344
CspCI	CAANNNNNGTGG	2 cut(s)	892, 927
CviAII	CATG	7 cut(s)	41, 83, 185, 769, 967, 994, 1115
CviQI	GTAC	4 cut(s)	220, 348, 504, 1307
DdeI	CTNAG	9 cut(s)	51, 145, 226, 532, 565, 758, 1026, 1077, 1187
DpnI	GATC	5 cut(s)	33, 763, 1106, 1185, 1282
DpnII	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
EaeI	YGGCCR	2 cut(s)	624, 1150
Eam1104I	CTCTTC	1 cut(s)	463
EarI	CTCTTC	1 cut(s)	463
Ecl136II	GAGCTC	1 cut(s)	531
Eco130I	CCWWGG	2 cut(s)	966, 1176
Eco147I	AGGCCT	1 cut(s)	1147
Eco24I	GRGCYC	2 cut(s)	533, 1168
Eco31I	GGTCTC	3 cut(s)	117, 465, 761
Eco47I	GGWCC	2 cut(s)	578, 1129
Eco53kI	GAGCTC	1 cut(s)	531
Eco57I	CTGAAG	4 cut(s)	239, 483, 839, 1206
Eco88I	CYCGRG	1 cut(s)	630
Eco91I	GGTNACC	1 cut(s)	794
EcoICRI	GAGCTC	1 cut(s)	531
EcoO109I	RGGNCCY	1 cut(s)	578
EcoO65I	GGTNACC	1 cut(s)	794
EcoRII	CCWGG	1 cut(s)	1147
EcoT14I	CCWWGG	2 cut(s)	966, 1176
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	533, 1168
ErhI	CCWWGG	2 cut(s)	966, 1176
Esp3I	CGTCTC	1 cut(s)	631
FaeI	CATG	7 cut(s)	44, 86, 188, 772, 970, 997, 1118
FaqI	GGGAC	2 cut(s)	109, 844
FatI	CATG	7 cut(s)	40, 82, 184, 768, 966, 993, 1114
FblI	GTMKAC	1 cut(s)	1022
Fnu4HI	GCNGC	3 cut(s)	848, 1083, 1336
FokI	GGATG	5 cut(s)	790, 1000, 1061, 1106, 1281
FriOI	GRGCYC	2 cut(s)	533, 1168
Fsp4HI	GCNGC	3 cut(s)	848, 1083, 1336
GlaI	GCGC	2 cut(s)	647, 719
GluI	GCNGC	3 cut(s)	848, 1083, 1336
HaeIII	GGCC	4 cut(s)	358, 626, 1147, 1152
HapII	CCGG	2 cut(s)	345, 623
HgaI	GACGC	3 cut(s)	106, 738, 1008
HhaI	GCGC	2 cut(s)	648, 720
Hin1I	GRCGYC	2 cut(s)	98, 730
Hin1II	CATG	7 cut(s)	44, 86, 188, 772, 970, 997, 1118
Hin6I	GCGC	2 cut(s)	646, 718
HinP1I	GCGC	2 cut(s)	646, 718
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HindIII	AAGCTT	1 cut(s)	310
HinfI	GANTC	5 cut(s)	10, 156, 1014, 1056, 1323
HpaII	CCGG	2 cut(s)	345, 623
HphI	GGTGA	8 cut(s)	151, 441, 470, 595, 806, 892, 939, 1171
Hpy166II	GTNNAC	5 cut(s)	603, 913, 1023, 1120, 1309
Hpy188I	TCNGA	9 cut(s)	9, 24, 258, 463, 535, 761, 1078, 1225, 1322
Hpy188III	TCNNGA	4 cut(s)	41, 425, 509, 1255
Hpy8I	GTNNAC	5 cut(s)	603, 913, 1023, 1120, 1309
HpyAV	CCTTC	7 cut(s)	111, 458, 786, 829, 987, 1025, 1120
HpyCH4III	ACNGT	5 cut(s)	219, 324, 441, 1102, 1198
HpyCH4V	TGCA	8 cut(s)	4, 139, 540, 553, 821, 1011, 1085, 1204
HpyF10VI	GCNNNNNNNGC	2 cut(s)	537, 1172
HpyF3I	CTNAG	9 cut(s)	51, 145, 226, 532, 565, 758, 1026, 1077, 1187
Hsp92I	GRCGYC	2 cut(s)	98, 730
Hsp92II	CATG	7 cut(s)	44, 86, 188, 772, 970, 997, 1118
HspAI	GCGC	2 cut(s)	646, 718
Kzo9I	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
LmnI	GCTCC	1 cut(s)	844
Lsp1109I	GCAGC	2 cut(s)	859, 1069
LweI	GCATC	4 cut(s)	13, 249, 812, 859
MaeIII	GTNAC	4 cut(s)	418, 794, 1057, 1096
MalI	GATC	5 cut(s)	33, 763, 1106, 1185, 1282
MboI	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
MflI	RGATCY	2 cut(s)	761, 1183
MhlI	GDGCHC	2 cut(s)	533, 1168
MlsI	TGGCCA	1 cut(s)	1152
MluCI	AATT	2 cut(s)	387, 839
MluNI	TGGCCA	1 cut(s)	1152
MlyI	GAGTC	2 cut(s)	4, 1065
Mox20I	TGGCCA	1 cut(s)	1152
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	1152
MslI	CAYNNNNRTG	2 cut(s)	750, 971
Msp20I	TGGCCA	1 cut(s)	1152
MspA1I	CMGCKG	1 cut(s)	1338
MspI	CCGG	2 cut(s)	345, 623
MspR9I	CCNGG	1 cut(s)	1149
Mva1269I	GAATGC	1 cut(s)	249
MvaI	CCWGG	1 cut(s)	1149
MvnI	CGCG	1 cut(s)	1019
MwoI	GCNNNNNNNGC	2 cut(s)	537, 1172
NcoI	CCATGG	1 cut(s)	966
NdeII	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
NlaIII	CATG	7 cut(s)	44, 86, 188, 772, 970, 997, 1118
NlaIV	GGNNCC	1 cut(s)	579
NmuCI	GTSAC	3 cut(s)	794, 1057, 1096
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	86
NspV	TTCGAA	1 cut(s)	234
PagI	TCATGA	1 cut(s)	40
PceI	AGGCCT	1 cut(s)	1147
PciI	ACATGT	1 cut(s)	82
PctI	GAATGC	1 cut(s)	249
PfeI	GAWTC	3 cut(s)	156, 1014, 1323
PinAI	ACCGGT	1 cut(s)	344
PkrI	GCNGC	3 cut(s)	849, 1084, 1337
PleI	GAGTC	2 cut(s)	4, 1064
PpsI	GAGTC	2 cut(s)	4, 1064
PpuMI	RGGWCCY	1 cut(s)	578
PscI	ACATGT	1 cut(s)	82
Psp124BI	GAGCTC	1 cut(s)	533
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	1 cut(s)	1147
PspEI	GGTNACC	1 cut(s)	794
PspGI	CCWGG	1 cut(s)	1147
PspN4I	GGNNCC	1 cut(s)	579
PspPI	GGNCC	2 cut(s)	578, 1129
PspPPI	RGGWCCY	1 cut(s)	578
PstI	CTGCAG	1 cut(s)	1087
PstNI	CAGNNNCTG	1 cut(s)	500
PsuI	RGATCY	2 cut(s)	761, 1183
PvuII	CAGCTG	1 cut(s)	1338
RsaI	GTAC	4 cut(s)	221, 349, 505, 1308
RsaNI	GTAC	4 cut(s)	220, 348, 504, 1307
RseI	CAYNNNNRTG	2 cut(s)	750, 971
SacI	GAGCTC	1 cut(s)	533
SatI	GCNGC	3 cut(s)	848, 1083, 1336
Sau3AI	GATC	5 cut(s)	31, 761, 1104, 1183, 1280
Sau96I	GGNCC	2 cut(s)	578, 1129
SchI	GAGTC	2 cut(s)	4, 1065
ScrFI	CCNGG	1 cut(s)	1149
SduI	GDGCHC	2 cut(s)	533, 1168
SfaNI	GCATC	4 cut(s)	13, 249, 812, 859
SfcI	CTRYAG	1 cut(s)	1083
SfuI	TTCGAA	1 cut(s)	234
SinI	GGWCC	2 cut(s)	578, 1129
SmiMI	CAYNNNNRTG	2 cut(s)	750, 971
SmlI	CTYRAG	6 cut(s)	190, 398, 407, 423, 509, 1253
SmoI	CTYRAG	6 cut(s)	190, 398, 407, 423, 509, 1253
Sse9I	AATT	2 cut(s)	387, 839
SseBI	AGGCCT	1 cut(s)	1147
SsiI	CCGC	1 cut(s)	724
SspI	AATATT	1 cut(s)	1317
SstI	GAGCTC	1 cut(s)	533
StuI	AGGCCT	1 cut(s)	1147
StyD4I	CCNGG	1 cut(s)	1147
StyI	CCWWGG	2 cut(s)	966, 1176
TaaI	ACNGT	5 cut(s)	219, 324, 441, 1102, 1198
TaqI	TCGA	1 cut(s)	234
TasI	AATT	2 cut(s)	387, 839
TatI	WGTACW	1 cut(s)	1306
TfiI	GAWTC	3 cut(s)	156, 1014, 1323
TscAI	CASTG	5 cut(s)	146, 222, 327, 1107, 1139
TseFI	GTSAC	3 cut(s)	794, 1057, 1096
TseI	GCWGC	3 cut(s)	847, 1082, 1335
Tsp45I	GTSAC	3 cut(s)	794, 1057, 1096
TspDTI	ATGAA	6 cut(s)	60, 752, 896, 945, 982, 1315
TspRI	CASTG	5 cut(s)	146, 222, 327, 1107, 1139
VpaK11BI	GGWCC	2 cut(s)	578, 1129
XapI	RAATTY	1 cut(s)	387
XceI	RCATGY	1 cut(s)	86
XmiI	GTMKAC	1 cut(s)	1022
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.