Prupe.2G205100_v2.0.a1

Protein of unknown function (DUF455)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0011094
Physical Location & Seq
Reverse (-)
23992314 .. 23994130
1817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G205100.1

Sequence Viewer

Length: 876 bp
ATGAGCGGAGACGAGAGCTTGGTGGAAGCGGCGCTCCGAGTTTTGAACACTGCGGACCCGTTCGAGAAGGCCCGAGTTGGCGACTCGGTGGCGGCTCAGTGGCTCGGAGGGGCCATCACTCGCGCCTACGACGCTTCCGTGGACCTTCCCGTACCGGATCGTCCTGCCAGGCTCAGCAACGTGAAGTTGGTGGCGCCGGGGCTGATGCCGAAGCTGGGAAAAGGCGGGAGCTTGCAGAGCAGGCAGGCCATAGTGCATAGCCTCGCGCACACTGAGAGTTGGGCTATTGACTTGTCTTGGGACATAATTGCTAGGTTTGGGAAGCAAGAGGCAATGCCGAGTGAGTTCTTCACGGATTTCGTAAAGGTGGCTCAGGACGAAGGCCGTCACTTCACTCTCCTCGCAGCTCGGCTTGAGGAGATGGGTTCTTTCTATGGAGCATTGCCGGCTCACGATGGCCTCTGGGCCTCTGCCGCTGCCACTTCCAAAGACCTAACCGCACGCCTGGCTGTCGAGCATTGCGTGCATGAGGCAAGAGGGCTGGATGTGCTGCCAACAACCATCTCCCGGTTCCGAAAAGGAGGCGACGACACAACAGCTGATTTGCTAGAGAGCGTGGTTTACCCTGAAGAAATAACCCACTGTGCTGCTGGAGTGAAGTGGTTCAAGTATCTTTGCATGAGGCTGGTGTCTGATGAGGAAGAAGATGAAGTGATTAAAAAGTTTCATGCCATTGTGAGGACGTATTTCAGGGGCCCTTTGAAGCCTCCTTTCAATGAAGAGGCGAGGAAAGCTGCTGGGTTTGGGCCTCGTTGGTATGAGCCTCTTGCTGTCAAAGAGCAAGGCACCAACCCTACCCAGCATGAGGGAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF455

Protein Analysis

292

Amino Acids

31.95

Weight (kDa)

5.64

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G04520
fragaria_vesca FvH4_7g18310 FvH4_7g18310 FvH4_7g18310 FvH4_7g18310
malus_domestica MD01G1099600.v1.1
prunus_persica Prupe.2G205100_v2.0.a1
pyrus_communis pycom01g12670
rosa_chinensis RchiOBHm_Chr1g0362011
rosa_laevigata RLG00000027680
rosa_multiflora Rmu_co8465241.1_g000001 Rmu_sc0010614.1_g000009
rosa_roxburghii Rroxscaffold_4G00294590
rosa_rugosa Rorug01G0292500 Rorug01G0292600
rosa_samantha Rh1AG303000 Rh1BG266200 Rh1CG284400 Rh1DG296200
rosa_wichuraiana Rw1G026980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 193, 845
AccBSI CCGCTC 1 cut(s) 6
AccII CGCG 2 cut(s) 123, 266
AciI CCGC 7 cut(s) 6, 29, 53, 92, 225, 474, 498
AclWI GGATC 1 cut(s) 165
AcuI CTGAAG 1 cut(s) 648
AcyI GRCGYC 1 cut(s) 194
AfaI GTAC 1 cut(s) 153
AfiI CCNNNNNNNGG 4 cut(s) 215, 567, 738, 865
AgsI TTSAA 4 cut(s) 46, 667, 763, 775
AjnI CCWGG 2 cut(s) 167, 504
AluBI AGCT 6 cut(s) 18, 214, 231, 407, 599, 794
AluI AGCT 6 cut(s) 18, 214, 231, 407, 599, 794
Alw26I GTCTC 1 cut(s) 3
AlwI GGATC 1 cut(s) 165
Ama87I CYCGRG 1 cut(s) 72
AoxI GGCC 8 cut(s) 69, 111, 246, 382, 457, 465, 754, 806
ApaI GGGCCC 1 cut(s) 758
ApeKI GCWGC 5 cut(s) 404, 476, 550, 647, 794
Asp700I GAANNNNTTC 1 cut(s) 662
AspLEI GCGC 4 cut(s) 34, 125, 196, 268
AspS9I GGNCC 8 cut(s) 55, 70, 111, 142, 465, 754, 755, 806
AsuC2I CCSGG 2 cut(s) 198, 568
AvaI CYCGRG 1 cut(s) 72
AvaII GGWCC 2 cut(s) 55, 142
BaeGI GKGCMC 1 cut(s) 758
BanI GGYRCC 2 cut(s) 193, 845
BanII GRGCYC 1 cut(s) 758
BbvI GCAGC 5 cut(s) 416, 463, 537, 634, 781
BccI CCATC 4 cut(s) 122, 415, 449, 569
BceAI ACGGC 1 cut(s) 369
BciT130I CCWGG 2 cut(s) 169, 506
BcnI CCSGG 2 cut(s) 198, 568
BcoDI GTCTC 1 cut(s) 3
BfaI CTAG 2 cut(s) 312, 608
BfoI RGCGCY 2 cut(s) 35, 197
BisI GCNGC 8 cut(s) 30, 93, 405, 474, 477, 551, 648, 795
BlpI GCTNAGC 1 cut(s) 173
BlsI GCNGC 8 cut(s) 31, 94, 406, 475, 478, 552, 649, 796
Bme1390I CCNGG 4 cut(s) 169, 198, 506, 568
Bme18I GGWCC 2 cut(s) 55, 142
BmeT110I CYCGRG 1 cut(s) 72
BmgT120I GGNCC 8 cut(s) 55, 70, 111, 142, 465, 754, 755, 806
BmiI GGNNCC 7 cut(s) 57, 112, 195, 572, 755, 756, 847
BmrFI CCNGG 4 cut(s) 169, 198, 506, 568
BmsI GCATC 1 cut(s) 195
BpmI CTGGAG 1 cut(s) 672
Bpu10I CCTNAGC 1 cut(s) 372
Bpu1102I GCTNAGC 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 2 cut(s) 198, 568
BsaHI GRCGYC 1 cut(s) 194
BsaJI CCNNGG 2 cut(s) 138, 197
BsaWI WCCGGW 1 cut(s) 154
Bsc4I CCNNNNNNNGG 4 cut(s) 215, 567, 738, 865
Bse118I RCCGGY 1 cut(s) 445
Bse3DI GCAATG 3 cut(s) 339, 440, 517
BseBI CCWGG 2 cut(s) 169, 506
BseDI CCNNGG 2 cut(s) 138, 197
BseGI GGATG 1 cut(s) 550
BseLI CCNNNNNNNGG 4 cut(s) 215, 567, 738, 865
BseMI GCAATG 3 cut(s) 339, 440, 517
BseMII CTCAG 4 cut(s) 110, 187, 264, 386
BseRI GAGGAG 2 cut(s) 389, 431
BseSI GKGCMC 1 cut(s) 758
BseXI GCAGC 5 cut(s) 416, 463, 537, 634, 781
BseYI CCCAGC 3 cut(s) 214, 797, 858
Bsh1236I CGCG 2 cut(s) 123, 266
BshFI GGCC 8 cut(s) 71, 113, 248, 384, 459, 467, 756, 808
BshNI GGYRCC 2 cut(s) 193, 845
BsiHKCI CYCGRG 1 cut(s) 72
BsiSI CCGG 4 cut(s) 155, 197, 446, 568
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 4 cut(s) 215, 567, 738, 865
BsmAI GTCTC 1 cut(s) 3
BsmBI CGTCTC 1 cut(s) 3
BsmFI GGGAC 1 cut(s) 314
BsnI GGCC 8 cut(s) 71, 113, 248, 384, 459, 467, 756, 808
BsoBI CYCGRG 1 cut(s) 72
Bsp120I GGGCCC 1 cut(s) 754
Bsp1286I GDGCHC 1 cut(s) 758
Bsp143I GATC 1 cut(s) 157
Bsp1720I GCTNAGC 1 cut(s) 173
BspACI CCGC 7 cut(s) 6, 29, 53, 92, 225, 474, 498
BspANI GGCC 8 cut(s) 71, 113, 248, 384, 459, 467, 756, 808
BspCNI CTCAG 4 cut(s) 109, 186, 265, 385
BspFNI CGCG 2 cut(s) 123, 266
BspLI GGNNCC 7 cut(s) 57, 112, 195, 572, 755, 756, 847
BspPI GGATC 1 cut(s) 165
BspT107I GGYRCC 2 cut(s) 193, 845
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 3 cut(s) 339, 440, 517
BsrFI RCCGGY 1 cut(s) 445
BssAI RCCGGY 1 cut(s) 445
BssECI CCNNGG 2 cut(s) 138, 197
BssMI GATC 1 cut(s) 157
BssNI GRCGYC 1 cut(s) 194
Bst2UI CCWGG 2 cut(s) 169, 506
Bst4CI ACNGT 1 cut(s) 644
Bst6I CTCTTC 1 cut(s) 774
BstACI GRCGYC 1 cut(s) 194
BstAPI GCANNNNNTGC 1 cut(s) 523
BstC8I GCNNGC 6 cut(s) 233, 242, 246, 447, 502, 524
BstDEI CTNAG 4 cut(s) 96, 173, 273, 372
BstDSI CCRYGG 1 cut(s) 138
BstF5I GGATG 1 cut(s) 550
BstFNI CGCG 2 cut(s) 123, 266
BstH2I RGCGCY 2 cut(s) 35, 197
BstHHI GCGC 4 cut(s) 34, 125, 196, 268
BstKTI GATC 1 cut(s) 160
BstMAI GTCTC 1 cut(s) 3
BstMBI GATC 1 cut(s) 157
BstMWI GCNNNNNNNGC 9 cut(s) 131, 237, 241, 446, 473, 506, 523, 547, 791
BstNI CCWGG 2 cut(s) 169, 506
BstSCI CCNGG 4 cut(s) 167, 196, 504, 566
BstSLI GKGCMC 1 cut(s) 758
BstUI CGCG 2 cut(s) 123, 266
BstV1I GCAGC 5 cut(s) 416, 463, 537, 634, 781
BsuRI GGCC 8 cut(s) 71, 113, 248, 384, 459, 467, 756, 808
BtgI CCRYGG 1 cut(s) 138
BtsCI GGATG 1 cut(s) 550
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 4 cut(s) 48, 104, 270, 640
Cac8I GCNNGC 6 cut(s) 233, 242, 246, 447, 502, 524
CfoI GCGC 4 cut(s) 34, 125, 196, 268
Cfr10I RCCGGY 1 cut(s) 445
Cfr13I GGNCC 8 cut(s) 55, 70, 111, 142, 465, 754, 755, 806
CseI GACGC 1 cut(s) 140
Csp6I GTAC 1 cut(s) 152
CviAII CATG 5 cut(s) 527, 679, 728, 863, 873
CviQI GTAC 1 cut(s) 152
DdeI CTNAG 4 cut(s) 96, 173, 273, 372
DinI GGCGCC 1 cut(s) 195
DpnI GATC 1 cut(s) 159
DpnII GATC 1 cut(s) 157
Eam1104I CTCTTC 1 cut(s) 774
EarI CTCTTC 1 cut(s) 774
Eco24I GRGCYC 1 cut(s) 758
Eco47I GGWCC 2 cut(s) 55, 142
Eco57I CTGAAG 1 cut(s) 648
Eco88I CYCGRG 1 cut(s) 72
EcoO109I RGGNCCY 2 cut(s) 754, 755
EcoRII CCWGG 2 cut(s) 167, 504
EcoT38I GRGCYC 1 cut(s) 758
EgeI GGCGCC 1 cut(s) 195
EheI GGCGCC 1 cut(s) 195
Esp3I CGTCTC 1 cut(s) 3
FaeI CATG 5 cut(s) 530, 682, 731, 866, 876
FaqI GGGAC 1 cut(s) 314
FatI CATG 5 cut(s) 526, 678, 727, 862, 872
FauI CCCGC 1 cut(s) 218
Fnu4HI GCNGC 8 cut(s) 30, 93, 405, 474, 477, 551, 648, 795
FokI GGATG 1 cut(s) 557
FriOI GRGCYC 1 cut(s) 758
Fsp4HI GCNGC 8 cut(s) 30, 93, 405, 474, 477, 551, 648, 795
FspBI CTAG 2 cut(s) 312, 608
GlaI GCGC 4 cut(s) 33, 124, 195, 267
GluI GCNGC 8 cut(s) 30, 93, 405, 474, 477, 551, 648, 795
GsaI CCCAGC 3 cut(s) 218, 801, 862
GsuI CTGGAG 1 cut(s) 672
HaeII RGCGCY 2 cut(s) 35, 197
HaeIII GGCC 8 cut(s) 71, 113, 248, 384, 459, 467, 756, 808
HapII CCGG 4 cut(s) 155, 197, 446, 568
HgaI GACGC 1 cut(s) 140
HhaI GCGC 4 cut(s) 34, 125, 196, 268
Hin1I GRCGYC 1 cut(s) 194
Hin1II CATG 5 cut(s) 530, 682, 731, 866, 876
Hin6I GCGC 4 cut(s) 32, 123, 194, 266
HinP1I GCGC 4 cut(s) 32, 123, 194, 266
HinfI GANTC 1 cut(s) 83
HpaII CCGG 4 cut(s) 155, 197, 446, 568
Hpy166II GTNNAC 2 cut(s) 142, 622
Hpy188I TCNGA 4 cut(s) 38, 107, 575, 694
Hpy188III TCNNGA 3 cut(s) 64, 374, 452
Hpy8I GTNNAC 2 cut(s) 142, 622
Hpy99I CGWCG 2 cut(s) 134, 590
HpyAV CCTTC 3 cut(s) 61, 155, 374
HpyCH4III ACNGT 1 cut(s) 644
HpyCH4IV ACGT 2 cut(s) 180, 743
HpyCH4V TGCA 4 cut(s) 235, 256, 526, 678
HpyF10VI GCNNNNNNNGC 9 cut(s) 131, 237, 241, 446, 473, 506, 523, 547, 791
HpyF3I CTNAG 4 cut(s) 96, 173, 273, 372
HpySE526I ACGT 2 cut(s) 180, 743
Hsp92I GRCGYC 1 cut(s) 194
Hsp92II CATG 5 cut(s) 530, 682, 731, 866, 876
HspAI GCGC 4 cut(s) 32, 123, 194, 266
KasI GGCGCC 1 cut(s) 193
KroI GCCGGC 1 cut(s) 445
KroNI GCCGGC 1 cut(s) 447
Kzo9I GATC 1 cut(s) 157
LmnI GCTCC 4 cut(s) 39, 228, 437, 869
Lsp1109I GCAGC 5 cut(s) 416, 463, 537, 634, 781
LweI GCATC 1 cut(s) 195
MaeI CTAG 2 cut(s) 312, 608
MaeII ACGT 2 cut(s) 180, 743
MaeIII GTNAC 1 cut(s) 386
MalI GATC 1 cut(s) 159
MbiI CCGCTC 1 cut(s) 6
MboI GATC 1 cut(s) 157
MboII GAAGA 5 cut(s) 340, 641, 713, 716, 791
MhlI GDGCHC 1 cut(s) 758
MluCI AATT 1 cut(s) 306
Mly113I GGCGCC 1 cut(s) 194
MlyI GAGTC 1 cut(s) 77
MroNI GCCGGC 1 cut(s) 445
MroXI GAANNNNTTC 1 cut(s) 662
MseI TTAA 1 cut(s) 717
MspA1I CMGCKG 2 cut(s) 476, 599
MspI CCGG 4 cut(s) 155, 197, 446, 568
MspR9I CCNGG 4 cut(s) 169, 198, 506, 568
MvaI CCWGG 2 cut(s) 169, 506
MvnI CGCG 2 cut(s) 123, 266
MwoI GCNNNNNNNGC 9 cut(s) 131, 237, 241, 446, 473, 506, 523, 547, 791
NaeI GCCGGC 1 cut(s) 447
NarI GGCGCC 1 cut(s) 194
NciI CCSGG 2 cut(s) 198, 568
NdeII GATC 1 cut(s) 157
NgoMIV GCCGGC 1 cut(s) 445
NlaIII CATG 5 cut(s) 530, 682, 731, 866, 876
NlaIV GGNNCC 7 cut(s) 57, 112, 195, 572, 755, 756, 847
NmeAIII GCCGAG 2 cut(s) 363, 388
NmuCI GTSAC 1 cut(s) 386
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 519
PdiI GCCGGC 1 cut(s) 447
PdmI GAANNNNTTC 1 cut(s) 662
PkrI GCNGC 8 cut(s) 31, 94, 406, 475, 478, 552, 649, 796
PleI GAGTC 1 cut(s) 77
PluTI GGCGCC 1 cut(s) 197
PpsI GAGTC 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 167, 504
PspFI CCCAGC 3 cut(s) 214, 797, 858
PspGI CCWGG 2 cut(s) 167, 504
PspN4I GGNNCC 7 cut(s) 57, 112, 195, 572, 755, 756, 847
PspOMI GGGCCC 1 cut(s) 754
PspPI GGNCC 8 cut(s) 55, 70, 111, 142, 465, 754, 755, 806
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 1 cut(s) 153
RsaNI GTAC 1 cut(s) 152
SaqAI TTAA 1 cut(s) 717
SatI GCNGC 8 cut(s) 30, 93, 405, 474, 477, 551, 648, 795
Sau3AI GATC 1 cut(s) 157
Sau96I GGNCC 8 cut(s) 55, 70, 111, 142, 465, 754, 755, 806
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 4 cut(s) 169, 198, 506, 568
SduI GDGCHC 1 cut(s) 758
SfaNI GCATC 1 cut(s) 195
SfoI GGCGCC 1 cut(s) 195
SinI GGWCC 2 cut(s) 55, 142
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
Sse9I AATT 1 cut(s) 306
SsiI CCGC 7 cut(s) 6, 29, 53, 92, 225, 474, 498
SspDI GGCGCC 1 cut(s) 193
SspMI CTAG 2 cut(s) 312, 608
StyD4I CCNGG 4 cut(s) 167, 196, 504, 566
TaaI ACNGT 1 cut(s) 644
TaiI ACGT 2 cut(s) 183, 746
TaqI TCGA 2 cut(s) 63, 513
TasI AATT 1 cut(s) 306
TauI GCSGC 3 cut(s) 32, 95, 476
Tru1I TTAA 1 cut(s) 717
Tru9I TTAA 1 cut(s) 717
TscAI CASTG 4 cut(s) 55, 104, 277, 647
TseFI GTSAC 1 cut(s) 386
TseI GCWGC 5 cut(s) 404, 476, 550, 647, 794
Tsp45I GTSAC 1 cut(s) 386
TspDTI ATGAA 3 cut(s) 716, 723, 792
TspGWI ACGGA 2 cut(s) 127, 368
TspRI CASTG 4 cut(s) 55, 104, 277, 647
VpaK11BI GGWCC 2 cut(s) 55, 142
XcmI CCANNNNNNNNNTGG 1 cut(s) 647
XmnI GAANNNNTTC 1 cut(s) 662
XspI CTAG 2 cut(s) 312, 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.