Rorug01G0292600

Protein of unknown function (DUF455)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0011094
Physical Location & Seq
Reverse (-)
40887345 .. 40889291
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0292600.1

Sequence Viewer

Length: 1947 bp
ATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTCTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAATATAAATCAGTTCGACCGGAGTGCAAATGGAGTTGTCTGTGAAGGTGATGCCAAGCCTTCATCGGGAATGATTGATCTCAACACAGGCACTTATTTCGGTGTTGGACATGCTACGTATGAAGAGCCTTTGCACGTATGGGACACTGCTACTAGGTCACTGGCAGACTTCACTACTCATTTCACTTTCGGGGTCGAATATGGTCCTGATGATGAAGGGTGGAAATTCAGCGATGGAATTGCCTTTTTCCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCGGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCAAGATTGTAAGCGTAGAGTTCGACTCTTGGGGAAACGAAGACTGGGATCCACATCCACTCCGGCCCCATATTGGGATCAACATCAATGAAATCTCTTCAGTTCAACACGCCGATTGGAATCCCAGTAACATGACCGGGAAGATTGGTAATGCATGGATAACTTATAACGCTACTGCCAACGACCTTACTGTGTTTTGGACATTCGAGCAAAACACAAATCCCGTTTTTCAAGGCAAATCTACTTCTTCCATTACTTACAATGTTGACTTGCGAGAGGTTCTCCCCGAAAGGGTTACAATTGGTTTTTCTGCTTCGGCCGGGTTATACCTTGGGCGCCATTTTTTATATTCATGGGAGTTTAATTCGACTTTATTGGATAACAAGAAAAAGATATTCTTGATACTGGAGATTGCAGTACCTGGCTTCATTTTGACGCTTGGTGCAGTCATATGTTGGTTTATGGTATTAAGGAATCGGAGAAACAATTACTCCGGCCAAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCAGACGATAGGAGGCTAGGCCAAGGAGGGTCAGGACAAGTATATAAAGGACTCTTCAAAGACCTTGGAGGCTGCACAGTTGCCGTAAAGAGAATCTTTGCAAGATCTGATCAGAAATATGAGAAAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAACAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTCGACACGCATCTATTTGGCAACAGAACAACCCTGCAATGGGACAACAGGTACAAGATAGCTTTGGGCTTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTACTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGATGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATCCCCGCTTGAGGTCTCAGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCCCCAGAATATGCTAATGAAGGGAGGGCTAGTAAGGAATCTGACATGTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAGGACTTACCAAGACGGTGAATATCACGTGCCACTCTTTAGGTGGGTTTGGCGGTTGTTCCTTGCAGGAAATATTCTGGATGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAAAGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAATAACAAGGAAAGACCCAAAGCAGGACAGGTGATGGAGGTTATTCAGCATGAAGCACCATTGCCGGAACTTCCACATGACATGCATAATGATCCAGAACTGCCTCAACCTCAATACCAATCTCAAATTGCATCTTCTCAGATATCCTCAACTTCTTCTAGCTATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF455

Protein Analysis

648

Amino Acids

73.0

Weight (kDa)

5.63

Isoelectric Point (pI)

41.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 274 1.7e-60 Legume lectin domain
Lectin_L-type_dom PF18483 50 - 259 3.2e-07 Legume lectin beta-barrel domain
Pkinase PF00069 340 - 605 1.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 341 - 603 7.7e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011094)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G04520
fragaria_vesca FvH4_7g18310 FvH4_7g18310 FvH4_7g18310 FvH4_7g18310
malus_domestica MD01G1099600.v1.1
prunus_persica Prupe.2G205100_v2.0.a1
pyrus_communis pycom01g12670
rosa_chinensis RchiOBHm_Chr1g0362011
rosa_laevigata RLG00000027680
rosa_multiflora Rmu_co8465241.1_g000001 Rmu_sc0010614.1_g000009
rosa_roxburghii Rroxscaffold_4G00294590
rosa_rugosa Rorug01G0292500 Rorug01G0292600
rosa_samantha Rh1AG303000 Rh1BG266200 Rh1CG284400 Rh1DG296200
rosa_wichuraiana Rw1G026980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AccB1I GGYRCC 1 cut(s) 774
AciI CCGC 4 cut(s) 396, 1171, 1474, 1663
AclWI GGATC 6 cut(s) 482, 495, 524, 1463, 1476, 1862
AcoI YGGCCR 2 cut(s) 756, 934
AcsI RAATTY 1 cut(s) 332
AcuI CTGAAG 2 cut(s) 522, 1411
AcvI CACGTG 1 cut(s) 1639
AcyI GRCGYC 1 cut(s) 775
AfaI GTAC 6 cut(s) 25, 858, 1316, 1380, 1410, 1768
AflIII ACRYGT 1 cut(s) 1566
AgsI TTSAA 5 cut(s) 109, 418, 545, 671, 1072
AjnI CCWGG 2 cut(s) 859, 1188
AluBI AGCT 8 cut(s) 958, 1325, 1403, 1438, 1462, 1697, 1743, 1938
AluI AGCT 8 cut(s) 958, 1325, 1403, 1438, 1462, 1697, 1743, 1938
Alw26I GTCTC 2 cut(s) 946, 1488
AlwI GGATC 6 cut(s) 482, 495, 524, 1463, 1476, 1862
AlwNI CAGNNNCTG 1 cut(s) 860
AoxI GGCC 6 cut(s) 503, 756, 934, 1033, 1335, 1521
ApeKI GCWGC 4 cut(s) 18, 998, 1086, 1694
ApoI RAATTY 1 cut(s) 332
Asp700I GAANNNNTTC 1 cut(s) 1142
AspLEI GCGC 1 cut(s) 777
AspS9I GGNCC 3 cut(s) 311, 504, 1522
AsuC2I CCSGG 2 cut(s) 577, 760
AsuHPI GGTGA 6 cut(s) 167, 413, 1454, 1640, 1763, 1819
AsuNHI GCTAGC 1 cut(s) 958
AvaII GGWCC 1 cut(s) 311
BamHI GGATCC 2 cut(s) 487, 1468
BanI GGYRCC 1 cut(s) 774
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BauI CACGAG 1 cut(s) 1463
BbrPI CACGTG 1 cut(s) 1639
BbsI GAAGAC 2 cut(s) 486, 1135
BbvCI CCTCAGC 1 cut(s) 1339
BbvI GCAGC 4 cut(s) 30, 985, 1073, 1706
BccI CCATC 3 cut(s) 335, 1188, 1804
BceAI ACGGC 1 cut(s) 1082
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 187, 221, 329, 363
BciT130I CCWGG 2 cut(s) 861, 1190
BciVI GTATCC 1 cut(s) 1508
BclI TGATCA 1 cut(s) 1123
BcnI CCSGG 2 cut(s) 577, 760
BcoDI GTCTC 2 cut(s) 946, 1488
BfaI CTAG 5 cut(s) 261, 959, 1031, 1551, 1935
BfoI RGCGCY 1 cut(s) 778
BfuI GTATCC 1 cut(s) 1508
BglII AGATCT 1 cut(s) 1118
BisI GCNGC 5 cut(s) 19, 999, 1087, 1171, 1695
BlpI GCTNAGC 1 cut(s) 1458
BlsI GCNGC 5 cut(s) 20, 1000, 1088, 1172, 1696
Bme1390I CCNGG 4 cut(s) 577, 760, 861, 1190
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 3 cut(s) 311, 504, 1522
BmiI GGNNCC 5 cut(s) 489, 506, 776, 1470, 1524
BmrFI CCNGG 4 cut(s) 577, 760, 861, 1190
BmrI ACTGGG 3 cut(s) 416, 493, 558
BmsI GCATC 5 cut(s) 148, 1282, 1354, 1681, 1916
BmtI GCTAGC 1 cut(s) 962
BmuI ACTGGG 3 cut(s) 416, 493, 558
BpiI GAAGAC 2 cut(s) 486, 1135
BplI GAGNNNNNCTC 4 cut(s) 449, 481, 705, 737
BpmI CTGGAG 1 cut(s) 866
Bpu10I CCTNAGC 1 cut(s) 1339
Bpu1102I GCTNAGC 1 cut(s) 1458
BpuEI CTTGAG 2 cut(s) 971, 1498
BpuMI CCSGG 2 cut(s) 577, 760
BsaAI YACGTR 3 cut(s) 225, 244, 1639
BsaBI GATNNNNATC 3 cut(s) 492, 521, 558
BsaHI GRCGYC 1 cut(s) 775
BsaI GGTCTC 1 cut(s) 1488
BsaJI CCNNGG 4 cut(s) 769, 1036, 1078, 1590
BsaWI WCCGGW 1 cut(s) 126
BsaXI ACNNNNNCTCC 6 cut(s) 483, 513, 914, 944, 1537, 1567
Bse1I ACTGG 5 cut(s) 273, 411, 488, 564, 849
Bse3DI GCAATG 2 cut(s) 1307, 1835
Bse8I GATNNNNATC 3 cut(s) 492, 521, 558
BseBI CCWGG 2 cut(s) 861, 1190
BseDI CCNNGG 4 cut(s) 769, 1036, 1078, 1590
BseGI GGATG 4 cut(s) 94, 493, 1423, 1696
BseJI GATNNNNATC 3 cut(s) 492, 521, 558
BseMI GCAATG 2 cut(s) 1307, 1835
BseMII CTCAG 3 cut(s) 1353, 1499, 1928
BseNI ACTGG 5 cut(s) 273, 411, 488, 564, 849
BseX3I CGGCCG 1 cut(s) 756
BseXI GCAGC 4 cut(s) 30, 985, 1073, 1706
BsgI GTGCAG 3 cut(s) 903, 1072, 1214
Bsh1285I CGRYCG 2 cut(s) 127, 759
BshFI GGCC 6 cut(s) 505, 758, 936, 1035, 1337, 1523
BshNI GGYRCC 1 cut(s) 774
BsiEI CGRYCG 2 cut(s) 127, 759
BsiSI CCGG 6 cut(s) 127, 502, 576, 759, 933, 1841
BslFI GGGAC 3 cut(s) 263, 1319, 1519
BsmAI GTCTC 2 cut(s) 946, 1488
BsmFI GGGAC 3 cut(s) 263, 1319, 1519
BsmI GAATGC 1 cut(s) 1232
BsnI GGCC 6 cut(s) 505, 758, 936, 1035, 1337, 1523
Bso31I GGTCTC 1 cut(s) 1488
Bsp143I GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
Bsp1720I GCTNAGC 1 cut(s) 1458
BspACI CCGC 4 cut(s) 396, 1171, 1474, 1663
BspANI GGCC 6 cut(s) 505, 758, 936, 1035, 1337, 1523
BspCNI CTCAG 3 cut(s) 1352, 1498, 1927
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 5 cut(s) 489, 506, 776, 1470, 1524
BspOI GCTAGC 1 cut(s) 962
BspPI GGATC 6 cut(s) 482, 495, 524, 1463, 1476, 1862
BspQI GCTCTTC 1 cut(s) 225
BspT107I GGYRCC 1 cut(s) 774
BspTNI GGTCTC 1 cut(s) 1488
BsrDI GCAATG 2 cut(s) 1307, 1835
BsrI ACTGG 5 cut(s) 273, 411, 488, 564, 849
BssECI CCNNGG 4 cut(s) 769, 1036, 1078, 1590
BssMI GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
BssNI GRCGYC 1 cut(s) 775
BssSI CACGAG 1 cut(s) 1463
BssT1I CCWWGG 4 cut(s) 769, 1036, 1078, 1590
Bst2BI CACGAG 1 cut(s) 1463
Bst2UI CCWGG 2 cut(s) 861, 1190
Bst4CI ACNGT 5 cut(s) 377, 631, 1093, 1413, 1628
Bst6I CTCTTC 3 cut(s) 225, 541, 1073
BstACI GRCGYC 1 cut(s) 775
BstAPI GCANNNNNTGC 1 cut(s) 51
BstBAI YACGTR 3 cut(s) 225, 244, 1639
BstC8I GCNNGC 2 cut(s) 30, 960
BstDEI CTNAG 5 cut(s) 1339, 1434, 1458, 1485, 1914
BstF5I GGATG 4 cut(s) 94, 493, 1423, 1696
BstH2I RGCGCY 1 cut(s) 778
BstHHI GCGC 1 cut(s) 777
BstKTI GATC 9 cut(s) 187, 490, 519, 949, 1121, 1126, 1471, 1726, 1870
BstMAI GTCTC 2 cut(s) 946, 1488
BstMBI GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
BstMCI CGRYCG 2 cut(s) 127, 759
BstMWI GCNNNNNNNGC 2 cut(s) 18, 51
BstNI CCWGG 2 cut(s) 861, 1190
BstNSI RCATGY 3 cut(s) 221, 1570, 1861
BstSCI CCNGG 4 cut(s) 575, 758, 859, 1188
BstSNI TACGTA 1 cut(s) 225
BstV1I GCAGC 4 cut(s) 30, 985, 1073, 1706
BstV2I GAAGAC 2 cut(s) 486, 1135
BstX2I RGATCY 3 cut(s) 487, 1118, 1468
BstYI RGATCY 3 cut(s) 487, 1118, 1468
BstZI CGGCCG 1 cut(s) 756
BsuI GTATCC 1 cut(s) 1508
BsuRI GGCC 6 cut(s) 505, 758, 936, 1035, 1337, 1523
BtgZI GCGATG 1 cut(s) 354
BtsCI GGATG 4 cut(s) 94, 493, 1423, 1696
BtsI GCAGTG 2 cut(s) 252, 1379
BtsIMutI CAGTG 3 cut(s) 252, 266, 1379
Cac8I GCNNGC 2 cut(s) 30, 960
CaiI CAGNNNCTG 1 cut(s) 860
CciI TCATGA 1 cut(s) 1213
CfoI GCGC 1 cut(s) 777
Cfr13I GGNCC 3 cut(s) 311, 504, 1522
CseI GACGC 1 cut(s) 883
CsiI ACCWGGT 1 cut(s) 1188
Csp6I GTAC 6 cut(s) 24, 857, 1315, 1379, 1409, 1767
CspCI CAANNNNNGTGG 2 cut(s) 1479, 1514
CviQI GTAC 6 cut(s) 24, 857, 1315, 1379, 1409, 1767
DdeI CTNAG 5 cut(s) 1339, 1434, 1458, 1485, 1914
DinI GGCGCC 1 cut(s) 776
DpnI GATC 9 cut(s) 186, 489, 518, 948, 1120, 1125, 1470, 1725, 1869
DpnII GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
EaeI YGGCCR 2 cut(s) 756, 934
EagI CGGCCG 1 cut(s) 756
Eam1104I CTCTTC 3 cut(s) 225, 541, 1073
EarI CTCTTC 3 cut(s) 225, 541, 1073
EclXI CGGCCG 1 cut(s) 756
Eco105I TACGTA 1 cut(s) 225
Eco130I CCWWGG 4 cut(s) 769, 1036, 1078, 1590
Eco31I GGTCTC 1 cut(s) 1488
Eco32I GATATC 2 cut(s) 1393, 1920
Eco47I GGWCC 1 cut(s) 311
Eco52I CGGCCG 1 cut(s) 756
Eco57I CTGAAG 2 cut(s) 522, 1411
Eco72I CACGTG 1 cut(s) 1639
EcoRII CCWGG 2 cut(s) 859, 1188
EcoRV GATATC 2 cut(s) 1393, 1920
EcoT14I CCWWGG 4 cut(s) 769, 1036, 1078, 1590
EcoT22I ATGCAT 3 cut(s) 595, 1246, 1863
EgeI GGCGCC 1 cut(s) 776
EheI GGCGCC 1 cut(s) 776
ErhI CCWWGG 4 cut(s) 769, 1036, 1078, 1590
FalI AAGNNNNNCTT 8 cut(s) 821, 853, 947, 979, 1094, 1126, 1600, 1632
FaqI GGGAC 3 cut(s) 263, 1319, 1519
FauI CCCGC 1 cut(s) 1481
FauNDI CATATG 1 cut(s) 890
FbaI TGATCA 1 cut(s) 1123
Fnu4HI GCNGC 5 cut(s) 19, 999, 1087, 1171, 1695
FokI GGATG 4 cut(s) 81, 480, 1430, 1703
Fsp4HI GCNGC 5 cut(s) 19, 999, 1087, 1171, 1695
FspBI CTAG 5 cut(s) 261, 959, 1031, 1551, 1935
GlaI GCGC 1 cut(s) 776
GluI GCNGC 5 cut(s) 19, 999, 1087, 1171, 1695
GsuI CTGGAG 1 cut(s) 866
HaeII RGCGCY 1 cut(s) 778
HaeIII GGCC 6 cut(s) 505, 758, 936, 1035, 1337, 1523
HapII CCGG 6 cut(s) 127, 502, 576, 759, 933, 1841
HgaI GACGC 1 cut(s) 883
HhaI GCGC 1 cut(s) 777
Hin1I GRCGYC 1 cut(s) 775
Hin6I GCGC 1 cut(s) 775
HinP1I GCGC 1 cut(s) 775
HincII GTYRAC 1 cut(s) 706
HindII GTYRAC 1 cut(s) 706
HindIII AAGCTT 2 cut(s) 1436, 1741
HinfI GANTC 6 cut(s) 464, 559, 913, 1065, 1107, 1559
HpaII CCGG 6 cut(s) 127, 502, 576, 759, 933, 1841
HphI GGTGA 6 cut(s) 167, 413, 1454, 1640, 1763, 1819
Hpy166II GTNNAC 4 cut(s) 404, 706, 1379, 1767
Hpy188I TCNGA 8 cut(s) 7, 918, 946, 1123, 1128, 1488, 1564, 1917
Hpy188III TCNNGA 8 cut(s) 174, 314, 838, 950, 1047, 1214, 1688, 1871
Hpy8I GTNNAC 4 cut(s) 404, 706, 1379, 1767
HpyAV CCTTC 7 cut(s) 115, 146, 177, 317, 1355, 1535, 1602
HpyCH4III ACNGT 5 cut(s) 377, 631, 1093, 1413, 1628
HpyCH4IV ACGT 4 cut(s) 224, 243, 1407, 1638
HpyF10VI GCNNNNNNNGC 2 cut(s) 18, 51
HpyF3I CTNAG 5 cut(s) 1339, 1434, 1458, 1485, 1914
HpySE526I ACGT 4 cut(s) 224, 243, 1407, 1638
Hsp92I GRCGYC 1 cut(s) 775
HspAI GCGC 1 cut(s) 775
KasI GGCGCC 1 cut(s) 774
Ksp22I TGATCA 1 cut(s) 1123
Kzo9I GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
LguI GCTCTTC 1 cut(s) 225
LmnI GCTCC 1 cut(s) 367
Lsp1109I GCAGC 4 cut(s) 30, 985, 1073, 1706
LweI GCATC 5 cut(s) 148, 1282, 1354, 1681, 1916
MabI ACCWGGT 1 cut(s) 1188
MaeI CTAG 5 cut(s) 261, 959, 1031, 1551, 1935
MaeII ACGT 4 cut(s) 224, 243, 1407, 1638
MaeIII GTNAC 3 cut(s) 264, 566, 733
MalI GATC 9 cut(s) 186, 489, 518, 948, 1120, 1125, 1470, 1725, 1869
MboI GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 3 cut(s) 487, 1118, 1468
Mly113I GGCGCC 1 cut(s) 775
MlyI GAGTC 2 cut(s) 458, 1059
MmeI TCCRAC 3 cut(s) 193, 1395, 1735
Mph1103I ATGCAT 3 cut(s) 595, 1246, 1863
MroXI GAANNNNTTC 1 cut(s) 1142
MseI TTAA 4 cut(s) 435, 801, 908, 1175
MslI CAYNNNNRTG 1 cut(s) 1362
MspA1I CMGCKG 1 cut(s) 1697
MspI CCGG 6 cut(s) 127, 502, 576, 759, 933, 1841
MspR9I CCNGG 4 cut(s) 577, 760, 861, 1190
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 1 cut(s) 1232
MvaI CCWGG 2 cut(s) 861, 1190
MwoI GCNNNNNNNGC 2 cut(s) 18, 51
NarI GGCGCC 1 cut(s) 775
NciI CCSGG 2 cut(s) 577, 760
NdeI CATATG 1 cut(s) 890
NdeII GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
NheI GCTAGC 1 cut(s) 958
NlaIV GGNNCC 5 cut(s) 489, 506, 776, 1470, 1524
NmuCI GTSAC 1 cut(s) 264
NsiI ATGCAT 3 cut(s) 595, 1246, 1863
NspI RCATGY 3 cut(s) 221, 1570, 1861
PagI TCATGA 1 cut(s) 1213
PciI ACATGT 1 cut(s) 1566
PciSI GCTCTTC 1 cut(s) 225
PctI GAATGC 1 cut(s) 1232
PdmI GAANNNNTTC 1 cut(s) 1142
PfeI GAWTC 4 cut(s) 559, 913, 1107, 1559
PkrI GCNGC 5 cut(s) 20, 1000, 1088, 1172, 1696
PleI GAGTC 2 cut(s) 458, 1059
PluTI GGCGCC 1 cut(s) 778
PmaCI CACGTG 1 cut(s) 1639
PmlI CACGTG 1 cut(s) 1639
PpsI GAGTC 2 cut(s) 458, 1059
Ppu21I YACGTR 3 cut(s) 225, 244, 1639
PscI ACATGT 1 cut(s) 1566
PsiI TTATAA 1 cut(s) 606
Psp6I CCWGG 2 cut(s) 859, 1188
PspCI CACGTG 1 cut(s) 1639
PspGI CCWGG 2 cut(s) 859, 1188
PspN4I GGNNCC 5 cut(s) 489, 506, 776, 1470, 1524
PspPI GGNCC 3 cut(s) 311, 504, 1522
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 3 cut(s) 487, 1118, 1468
PvuII CAGCTG 1 cut(s) 1697
RsaI GTAC 6 cut(s) 25, 858, 1316, 1380, 1410, 1768
RsaNI GTAC 6 cut(s) 24, 857, 1315, 1379, 1409, 1767
RseI CAYNNNNRTG 1 cut(s) 1362
SapI GCTCTTC 1 cut(s) 225
SaqAI TTAA 4 cut(s) 435, 801, 908, 1175
SatI GCNGC 5 cut(s) 19, 999, 1087, 1171, 1695
Sau3AI GATC 9 cut(s) 184, 487, 516, 946, 1118, 1123, 1468, 1723, 1867
Sau96I GGNCC 3 cut(s) 311, 504, 1522
SchI GAGTC 2 cut(s) 458, 1059
ScrFI CCNGG 4 cut(s) 577, 760, 861, 1190
SexAI ACCWGGT 1 cut(s) 1188
SfaNI GCATC 5 cut(s) 148, 1282, 1354, 1681, 1916
SfoI GGCGCC 1 cut(s) 776
SinI GGWCC 1 cut(s) 311
SmiMI CAYNNNNRTG 1 cut(s) 1362
SmlI CTYRAG 2 cut(s) 950, 1477
SmoI CTYRAG 2 cut(s) 950, 1477
SnaBI TACGTA 1 cut(s) 225
SsiI CCGC 4 cut(s) 396, 1171, 1474, 1663
SspDI GGCGCC 1 cut(s) 774
SspI AATATT 2 cut(s) 49, 1684
SspMI CTAG 5 cut(s) 261, 959, 1031, 1551, 1935
StyD4I CCNGG 4 cut(s) 575, 758, 859, 1188
StyI CCWWGG 4 cut(s) 769, 1036, 1078, 1590
TaaI ACNGT 5 cut(s) 377, 631, 1093, 1413, 1628
TaiI ACGT 4 cut(s) 227, 246, 1410, 1641
TaqI TCGA 8 cut(s) 123, 303, 462, 645, 806, 1183, 1266, 1726
TatI WGTACW 2 cut(s) 1378, 1766
TauI GCSGC 1 cut(s) 1173
TfiI GAWTC 4 cut(s) 559, 913, 1107, 1559
Tru1I TTAA 4 cut(s) 435, 801, 908, 1175
Tru9I TTAA 4 cut(s) 435, 801, 908, 1175
TscAI CASTG 3 cut(s) 259, 273, 1379
TseFI GTSAC 1 cut(s) 264
TseI GCWGC 4 cut(s) 18, 998, 1086, 1694
Tsp45I GTSAC 1 cut(s) 264
TspRI CASTG 3 cut(s) 259, 273, 1379
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 332
XceI RCATGY 3 cut(s) 221, 1570, 1861
XcmI CCANNNNNNNNNTGG 1 cut(s) 1650
XmnI GAANNNNTTC 1 cut(s) 1142
XspI CTAG 5 cut(s) 261, 959, 1031, 1551, 1935
Zsp2I ATGCAT 3 cut(s) 595, 1246, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.