Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008020

Physical Location & Seq

Genomic Coordinates Forward (+)

24104556 .. 24106438

Gene Structure 1883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G207100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGGTTGGAGCAGTTCTACCTCCAACTCTAAAATGCGCCGTGAGTGCTGTTGCAGTCTTAACCTGCGCACTTATAAGCACCCTTTCCTTCGCTCTCCATGACGCCGCACAGGACCCAATCATACACCAGGTCACAGACAATCACCGCCCTCTGCTGGGGACAGAGAGAAGCTTCCAGATGTTCATCGAGAAATACGGGAAGAAGTATTCGACCCGAAAGGAGTACATGCACCGCCTCGGGATCTTCGCAAAGAACATGGTCAGAGCCGCCGAACACCAGGCCCTTGATCCGACTGCTGTCCACGGCGTCACGCCTTTCTCGGACCTTTCCGAGGAGGAGTTCGAGCGGATGTACACCGGCATGAGAGCTGTCCCGCCGGCCAGCTCGAACGACGGCGTTTCGGATAGTGCTCCACCGGTTATGGATGTTGGTGATTTGCCTGAGAATTTTGATTGGAGAGAGAAGGGAGCTGTTACTGAGGTCAAGATGCAGGGTGGGTGTGGGTCGTGCTGGGCCTTCAGCACTACAGGAGCAATTGAAGGGGCGAATTTTATTGCAACAGGAAAGCTTCTTAGTCTCAGTGAGCAACAGCTTGTGGACTGCGATAACACGTGCGATGCGAAAGACAAGACCGCCTGCGACAGTGGGTGTGGTGGCGGGCTTATGACAAATGCCTACGAATATCTGATTGAAGCGGGAGGGTTGGAGGAGGAGAGCACATACCCATACACCGGAAGACGGGGCGAATGCAAATTTAATCTGGACAAGGTGGCTGTAAAAGTTGCCAATTTTAGCACCATCCCTATTGATGAGGACCAAATTGCAGCCAATTTAGTCCACCATGGCCCCCTTGCCATCGGGTTGAATGCCATGTTTATGCAAACGTACATAGGCGGTGTTTCGTGCCCCCTAATCTGTTTCAGGAAATGGGTGAACCATGGTGTTTTACTTGTGGGGTATGGTGCCAAGGGCTACTCCATTCTCAGGCTGCGCAACAAGCCATATTGGATCATCAAGAATTCATGGGGTGAACAATGGGGAGAGAATGGGTATTATCATCTTTGCCGAGGCCATGCCATGTGTGGCATGAACTCAATGGTCTCTGCAGTTGTGACCCGTACTCGTCCCGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04142 ko04210 map04142 map04210

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

378

Amino Acids

41.15

Weight (kDa)

6.01

Isoelectric Point (pI)

34.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54940 AT3G54940
fragaria_vesca	FvH4_7g18550 FvH4_7g18550 FvH4_7g18550 FvH4_7g18581
malus_domestica	MD07G1169100.v1.1
prunus_persica	Prupe.2G207100_v2.0.a1
pyrus_communis	pycom07g16300
rosa_chinensis	RchiOBHm_Chr1g0362341 RchiOBHm_Chr3g0466551
rosa_laevigata	RLG00000032870
rosa_multiflora	Rmu_co8195178.1_g000001 Rmu_co8521771.1_g000001 Rmu_sc0003332.1_g000003
rosa_roxburghii	Rroxscaffold_1G00054320 Rroxscaffold_4G00294240
rosa_rugosa	Rorug01G0297500
rosa_samantha	Rh1AG306400 Rh1BG269900 Rh1CG287400 Rh1DG300100 Rh3BG150800
rosa_wichuraiana	Rw1G027200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	74
Acc16I	TGCGCA	2 cut(s)	67, 992
Acc36I	ACCTGC	1 cut(s)	71
AccB1I	GGYRCC	1 cut(s)	962
AccBSI	CCGCTC	1 cut(s)	346
AclWI	GGATC	3 cut(s)	248, 281, 1016
AcoI	YGGCCR	1 cut(s)	378
AcsI	RAATTY	4 cut(s)	445, 547, 752, 1018
AcuI	CTGAAG	1 cut(s)	502
AcvI	CACGTG	1 cut(s)	612
AcyI	GRCGYC	2 cut(s)	102, 306
AfaI	GTAC	4 cut(s)	224, 353, 887, 1120
AfiI	CCNNNNNNNGG	6 cut(s)	154, 155, 331, 731, 738, 984
AflIII	ACRYGT	1 cut(s)	609
AgeI	ACCGGT	1 cut(s)	415
AgsI	TTSAA	3 cut(s)	539, 692, 865
AjnI	CCWGG	2 cut(s)	126, 276
AluBI	AGCT	6 cut(s)	171, 368, 384, 470, 568, 592
AluI	AGCT	6 cut(s)	171, 368, 384, 470, 568, 592
Alw21I	GWGCWC	2 cut(s)	412, 719
Alw26I	GTCTC	2 cut(s)	581, 1105
AlwI	GGATC	3 cut(s)	248, 281, 1016
Ama87I	CYCGRG	1 cut(s)	236
AoxI	GGCC	5 cut(s)	279, 378, 513, 844, 1069
ApeKI	GCWGC	2 cut(s)	824, 988
ApoI	RAATTY	4 cut(s)	445, 547, 752, 1018
AsiGI	ACCGGT	1 cut(s)	415
AspLEI	GCGC	3 cut(s)	38, 68, 993
AspS9I	GGNCC	6 cut(s)	112, 280, 322, 513, 814, 845
AsuHPI	GGTGA	4 cut(s)	134, 443, 943, 1040
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	3 cut(s)	112, 322, 814
BaeGI	GKGCMC	1 cut(s)	908
BanI	GGYRCC	1 cut(s)	962
BbrPI	CACGTG	1 cut(s)	612
BbsI	GAAGAC	1 cut(s)	742
Bbv12I	GWGCWC	2 cut(s)	412, 719
BbvI	GCAGC	2 cut(s)	836, 975
BccI	CCATC	2 cut(s)	806, 863
BceAI	ACGGC	3 cut(s)	23, 319, 409
BciT130I	CCWGG	2 cut(s)	128, 278
BcoDI	GTCTC	2 cut(s)	581, 1105
BfaI	CTAG	1 cut(s)	1132
BfmI	CTRYAG	2 cut(s)	525, 1104
BfuAI	ACCTGC	1 cut(s)	71
BisI	GCNGC	4 cut(s)	105, 267, 825, 989
BlsI	GCNGC	4 cut(s)	106, 268, 826, 990
Bme1390I	CCNGG	2 cut(s)	128, 278
Bme18I	GGWCC	3 cut(s)	112, 322, 814
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	6 cut(s)	112, 280, 322, 513, 814, 845
BmiI	GGNNCC	3 cut(s)	114, 847, 964
BmrFI	CCNGG	2 cut(s)	128, 278
BmsI	GCATC	2 cut(s)	477, 607
BoxI	GACNNNNGTC	1 cut(s)	296
BpiI	GAAGAC	1 cut(s)	742
BsaAI	YACGTR	1 cut(s)	612
BsaBI	GATNNNNATC	1 cut(s)	182
BsaHI	GRCGYC	2 cut(s)	102, 306
BsaI	GGTCTC	1 cut(s)	1105
BsaJI	CCNNGG	7 cut(s)	235, 301, 330, 841, 937, 966, 1066
BsaWI	WCCGGW	2 cut(s)	415, 731
Bsc4I	CCNNNNNNNGG	6 cut(s)	154, 155, 331, 731, 738, 984
Bse118I	RCCGGY	3 cut(s)	356, 376, 415
Bse8I	GATNNNNATC	1 cut(s)	182
BseBI	CCWGG	2 cut(s)	128, 278
BseDI	CCNNGG	7 cut(s)	235, 301, 330, 841, 937, 966, 1066
BseGI	GGATG	3 cut(s)	354, 430, 798
BseJI	GATNNNNATC	1 cut(s)	182
BseLI	CCNNNNNNNGG	6 cut(s)	154, 155, 331, 731, 738, 984
BseMII	CTCAG	4 cut(s)	432, 468, 592, 997
BseRI	GAGGAG	4 cut(s)	347, 350, 722, 725
BseSI	GKGCMC	1 cut(s)	908
BseXI	GCAGC	2 cut(s)	836, 975
BseYI	CCCAGC	2 cut(s)	154, 510
BshFI	GGCC	5 cut(s)	281, 380, 515, 846, 1071
BshNI	GGYRCC	1 cut(s)	962
BshTI	ACCGGT	1 cut(s)	415
BsiHKAI	GWGCWC	2 cut(s)	412, 719
BsiHKCI	CYCGRG	1 cut(s)	236
BsiSI	CCGG	4 cut(s)	357, 377, 416, 732
BslFI	GGGAC	3 cut(s)	172, 356, 1110
BslI	CCNNNNNNNGG	6 cut(s)	154, 155, 331, 731, 738, 984
BsmAI	GTCTC	2 cut(s)	581, 1105
BsmFI	GGGAC	3 cut(s)	172, 356, 1110
BsmI	GAATGC	2 cut(s)	752, 871
BsnI	GGCC	5 cut(s)	281, 380, 515, 846, 1071
Bso31I	GGTCTC	1 cut(s)	1105
BsoBI	CYCGRG	1 cut(s)	236
Bsp1286I	GDGCHC	3 cut(s)	412, 719, 908
Bsp1407I	TGTACA	1 cut(s)	351
Bsp143I	GATC	3 cut(s)	240, 286, 1008
Bsp19I	CCATGG	2 cut(s)	841, 937
BspANI	GGCC	5 cut(s)	281, 380, 515, 846, 1071
BspCNI	CTCAG	4 cut(s)	433, 469, 591, 996
BspLI	GGNNCC	3 cut(s)	114, 847, 964
BspMAI	CTGCAG	1 cut(s)	1108
BspMI	ACCTGC	1 cut(s)	71
BspPI	GGATC	3 cut(s)	248, 281, 1016
BspT107I	GGYRCC	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	1105
BsrBI	CCGCTC	1 cut(s)	346
BsrFI	RCCGGY	3 cut(s)	356, 376, 415
BsrGI	TGTACA	1 cut(s)	351
BssAI	RCCGGY	3 cut(s)	356, 376, 415
BssECI	CCNNGG	7 cut(s)	235, 301, 330, 841, 937, 966, 1066
BssMI	GATC	3 cut(s)	240, 286, 1008
BssNI	GRCGYC	2 cut(s)	102, 306
BssT1I	CCWWGG	3 cut(s)	841, 937, 966
Bst2UI	CCWGG	2 cut(s)	128, 278
Bst4CI	ACNGT	1 cut(s)	644
BstACI	GRCGYC	2 cut(s)	102, 306
BstAUI	TGTACA	1 cut(s)	351
BstBAI	YACGTR	1 cut(s)	612
BstC8I	GCNNGC	4 cut(s)	378, 382, 637, 659
BstDEI	CTNAG	5 cut(s)	441, 477, 572, 578, 983
BstDSI	CCRYGG	3 cut(s)	301, 841, 937
BstENI	CCTNNNNNAGG	1 cut(s)	329
BstF5I	GGATG	3 cut(s)	354, 430, 798
BstHHI	GCGC	3 cut(s)	38, 68, 993
BstKTI	GATC	3 cut(s)	243, 289, 1011
BstMAI	GTCTC	2 cut(s)	581, 1105
BstMBI	GATC	3 cut(s)	240, 286, 1008
BstMWI	GCNNNNNNNGC	2 cut(s)	44, 997
BstNI	CCWGG	2 cut(s)	128, 278
BstNSI	RCATGY	1 cut(s)	229
BstPAI	GACNNNNGTC	1 cut(s)	296
BstSCI	CCNGG	2 cut(s)	126, 276
BstSFI	CTRYAG	2 cut(s)	525, 1104
BstSLI	GKGCMC	1 cut(s)	908
BstV1I	GCAGC	2 cut(s)	836, 975
BstV2I	GAAGAC	1 cut(s)	742
BstX2I	RGATCY	1 cut(s)	240
BstYI	RGATCY	1 cut(s)	240
BsuRI	GGCC	5 cut(s)	281, 380, 515, 846, 1071
BtgI	CCRYGG	3 cut(s)	301, 841, 937
BtgZI	GCGATG	1 cut(s)	630
BtsCI	GGATG	3 cut(s)	354, 430, 798
BtsIMutI	CAGTG	2 cut(s)	586, 649
BveI	ACCTGC	1 cut(s)	71
Cac8I	GCNNGC	4 cut(s)	378, 382, 637, 659
CfoI	GCGC	3 cut(s)	38, 68, 993
Cfr10I	RCCGGY	3 cut(s)	356, 376, 415
Cfr13I	GGNCC	6 cut(s)	112, 280, 322, 513, 814, 845
CseI	GACGC	2 cut(s)	110, 295
CsiI	ACCWGGT	1 cut(s)	126
Csp6I	GTAC	4 cut(s)	223, 352, 886, 1119
CspAI	ACCGGT	1 cut(s)	415
CviQI	GTAC	4 cut(s)	223, 352, 886, 1119
DdeI	CTNAG	5 cut(s)	441, 477, 572, 578, 983
DpnI	GATC	3 cut(s)	242, 288, 1010
DpnII	GATC	3 cut(s)	240, 286, 1008
EaeI	YGGCCR	1 cut(s)	378
Eco130I	CCWWGG	3 cut(s)	841, 937, 966
Eco31I	GGTCTC	1 cut(s)	1105
Eco47I	GGWCC	3 cut(s)	112, 322, 814
Eco57I	CTGAAG	1 cut(s)	502
Eco72I	CACGTG	1 cut(s)	612
Eco88I	CYCGRG	1 cut(s)	236
EcoNI	CCTNNNNNAGG	1 cut(s)	329
EcoO109I	RGGNCCY	2 cut(s)	112, 280
EcoRI	GAATTC	1 cut(s)	1018
EcoRII	CCWGG	2 cut(s)	126, 276
EcoT14I	CCWWGG	3 cut(s)	841, 937, 966
ErhI	CCWWGG	3 cut(s)	841, 937, 966
FaqI	GGGAC	3 cut(s)	172, 356, 1110
FauI	CCCGC	3 cut(s)	381, 650, 688
Fnu4HI	GCNGC	4 cut(s)	105, 267, 825, 989
FokI	GGATG	3 cut(s)	361, 437, 785
Fsp4HI	GCNGC	4 cut(s)	105, 267, 825, 989
FspBI	CTAG	1 cut(s)	1132
FspI	TGCGCA	2 cut(s)	67, 992
GlaI	GCGC	3 cut(s)	37, 67, 992
GluI	GCNGC	4 cut(s)	105, 267, 825, 989
GsaI	CCCAGC	2 cut(s)	158, 514
HaeIII	GGCC	5 cut(s)	281, 380, 515, 846, 1071
HapII	CCGG	4 cut(s)	357, 377, 416, 732
HgaI	GACGC	2 cut(s)	110, 295
HhaI	GCGC	3 cut(s)	38, 68, 993
Hin1I	GRCGYC	2 cut(s)	102, 306
Hin6I	GCGC	3 cut(s)	36, 66, 991
HinP1I	GCGC	3 cut(s)	36, 66, 991
HindIII	AAGCTT	2 cut(s)	169, 566
HpaII	CCGG	4 cut(s)	357, 377, 416, 732
HphI	GGTGA	4 cut(s)	134, 443, 943, 1040
Hpy166II	GTNNAC	6 cut(s)	301, 354, 598, 838, 934, 1031
Hpy188I	TCNGA	6 cut(s)	263, 291, 322, 331, 403, 687
Hpy188III	TCNNGA	7 cut(s)	175, 187, 238, 484, 761, 922, 1015
Hpy8I	GTNNAC	6 cut(s)	301, 354, 598, 838, 934, 1031
Hpy99I	CGWCG	1 cut(s)	395
HpyAV	CCTTC	4 cut(s)	97, 457, 526, 533
HpyCH4III	ACNGT	1 cut(s)	644
HpyCH4IV	ACGT	2 cut(s)	611, 884
HpyCH4V	TGCA	8 cut(s)	53, 229, 490, 557, 750, 824, 880, 1106
HpyF10VI	GCNNNNNNNGC	2 cut(s)	44, 997
HpyF3I	CTNAG	5 cut(s)	441, 477, 572, 578, 983
HpySE526I	ACGT	2 cut(s)	611, 884
Hsp92I	GRCGYC	2 cut(s)	102, 306
HspAI	GCGC	3 cut(s)	36, 66, 991
KroI	GCCGGC	1 cut(s)	376
KroNI	GCCGGC	1 cut(s)	378
Kzo9I	GATC	3 cut(s)	240, 286, 1008
LmnI	GCTCC	4 cut(s)	8, 415, 467, 530
Lsp1109I	GCAGC	2 cut(s)	836, 975
LweI	GCATC	2 cut(s)	477, 607
MabI	ACCWGGT	1 cut(s)	126
MaeI	CTAG	1 cut(s)	1132
MaeII	ACGT	2 cut(s)	611, 884
MaeIII	GTNAC	4 cut(s)	130, 307, 472, 1111
MalI	GATC	3 cut(s)	242, 288, 1010
MbiI	CCGCTC	1 cut(s)	346
MboI	GATC	3 cut(s)	240, 286, 1008
MboII	GAAGA	3 cut(s)	211, 235, 747
MfeI	CAATTG	1 cut(s)	534
MflI	RGATCY	1 cut(s)	240
MhlI	GDGCHC	3 cut(s)	412, 719, 908
MluCI	AATT	8 cut(s)	445, 534, 547, 752, 787, 819, 829, 1018
MmeI	TCCRAC	3 cut(s)	47, 314, 684
MroNI	GCCGGC	1 cut(s)	376
MseI	TTAA	2 cut(s)	59, 756
MslI	CAYNNNNRTG	2 cut(s)	359, 875
MspI	CCGG	4 cut(s)	357, 377, 416, 732
MspR9I	CCNGG	2 cut(s)	128, 278
MunI	CAATTG	1 cut(s)	534
Mva1269I	GAATGC	2 cut(s)	752, 871
MvaI	CCWGG	2 cut(s)	128, 278
MwoI	GCNNNNNNNGC	2 cut(s)	44, 997
NaeI	GCCGGC	1 cut(s)	378
NcoI	CCATGG	2 cut(s)	841, 937
NdeII	GATC	3 cut(s)	240, 286, 1008
NgoMIV	GCCGGC	1 cut(s)	376
NlaIV	GGNNCC	3 cut(s)	114, 847, 964
NmeAIII	GCCGAG	1 cut(s)	1091
NmuCI	GTSAC	3 cut(s)	130, 307, 1111
NsbI	TGCGCA	2 cut(s)	67, 992
NspI	RCATGY	1 cut(s)	229
PcsI	WCGNNNNNNNCGW	1 cut(s)	617
PctI	GAATGC	2 cut(s)	752, 871
PdiI	GCCGGC	1 cut(s)	378
PinAI	ACCGGT	1 cut(s)	415
PkrI	GCNGC	4 cut(s)	106, 268, 826, 990
PmaCI	CACGTG	1 cut(s)	612
PmlI	CACGTG	1 cut(s)	612
Ppu21I	YACGTR	1 cut(s)	612
PpuMI	RGGWCCY	1 cut(s)	112
PshAI	GACNNNNGTC	1 cut(s)	296
PsiI	TTATAA	1 cut(s)	74
Psp5II	RGGWCCY	1 cut(s)	112
Psp6I	CCWGG	2 cut(s)	126, 276
PspCI	CACGTG	1 cut(s)	612
PspFI	CCCAGC	2 cut(s)	154, 510
PspGI	CCWGG	2 cut(s)	126, 276
PspN4I	GGNNCC	3 cut(s)	114, 847, 964
PspPI	GGNCC	6 cut(s)	112, 280, 322, 513, 814, 845
PspPPI	RGGWCCY	1 cut(s)	112
PstI	CTGCAG	1 cut(s)	1108
PsuI	RGATCY	1 cut(s)	240
RsaI	GTAC	4 cut(s)	224, 353, 887, 1120
RsaNI	GTAC	4 cut(s)	223, 352, 886, 1119
RseI	CAYNNNNRTG	2 cut(s)	359, 875
SaqAI	TTAA	2 cut(s)	59, 756
SatI	GCNGC	4 cut(s)	105, 267, 825, 989
Sau3AI	GATC	3 cut(s)	240, 286, 1008
Sau96I	GGNCC	6 cut(s)	112, 280, 322, 513, 814, 845
ScrFI	CCNGG	2 cut(s)	128, 278
SduI	GDGCHC	3 cut(s)	412, 719, 908
SexAI	ACCWGGT	1 cut(s)	126
SfaNI	GCATC	2 cut(s)	477, 607
SfcI	CTRYAG	2 cut(s)	525, 1104
SinI	GGWCC	3 cut(s)	112, 322, 814
SmiMI	CAYNNNNRTG	2 cut(s)	359, 875
Sse9I	AATT	8 cut(s)	445, 534, 547, 752, 787, 819, 829, 1018
SspMI	CTAG	1 cut(s)	1132
StyD4I	CCNGG	2 cut(s)	126, 276
StyI	CCWWGG	3 cut(s)	841, 937, 966
TaaI	ACNGT	1 cut(s)	644
TaiI	ACGT	2 cut(s)	614, 887
TaqI	TCGA	4 cut(s)	186, 209, 342, 386
TasI	AATT	8 cut(s)	445, 534, 547, 752, 787, 819, 829, 1018
TatI	WGTACW	2 cut(s)	222, 351
TauI	GCSGC	2 cut(s)	107, 269
Tru1I	TTAA	2 cut(s)	59, 756
Tru9I	TTAA	2 cut(s)	59, 756
TscAI	CASTG	2 cut(s)	586, 649
TseFI	GTSAC	3 cut(s)	130, 307, 1111
TseI	GCWGC	2 cut(s)	824, 988
Tsp45I	GTSAC	3 cut(s)	130, 307, 1111
TspDTI	ATGAA	3 cut(s)	172, 1011, 1103
TspRI	CASTG	2 cut(s)	586, 649
VpaK11BI	GGWCC	3 cut(s)	112, 322, 814
XagI	CCTNNNNNAGG	1 cut(s)	329
XapI	RAATTY	4 cut(s)	445, 547, 752, 1018
XceI	RCATGY	1 cut(s)	229
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1079
XspI	CTAG	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.