Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005498

Physical Location & Seq

Genomic Coordinates Reverse (-)

24316136 .. 24320737

Gene Structure 4602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G210400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGTTACACAGGCTCATGACATCGTATAAGCTTGATCCTGACGTTGTTCGCTGGGGTCTCCATCTCTTGGATGATGTTTGTACTCTTTCGAATGATAGCTCGCACAGTACTGTTACTCGTTATGACCAGGATTTGAGTCAAGTAGAGTATGTTAGAGAAGGTTATGTTGAGCCTTGCATTGTGGAGAATGATGAGATTATAGCTCAGACGTACCAAGAAGAGTTATCGAGACTTGCTTCTGCAGAAGCATCAGGAGTTTCTGGTTGTGAAGATGGGAATTTGGAGTCGTCAATTCTAGGGCAGGATTGGCTTGGTCCTTCAAACAGACACAGTGGTTCTGGGCTTCAAAATGTTCAGGATATAGTGAATGATTTTGACATAAAGATAGACACTGATGATTATAGAGATAAAGAAAATGAGGCAGATGATCCTAGGAGACATGGAAGCGAGGAAGCAAACGATCATAGTGAAGGAGAATGCTCTGTCAATAGGGAAGACTTCTTACATTCATTGGACATAACAGATGAATCTACTCTTGATGGTGAAGTGGGGAGAAGATTGAATCAGTTGGTTTCTGTTCCTCATATTCCTAGAACGAATGAGAACATACCCTCAGCTGATGAAGAGATATCAGATCATCAAAGGCTGTTAGAAAGACTGCAGTTGTATGATTTGGTGGAGTGTAAGGTCCAGGGAGATGGTAACTGTCAGTTTCGTGCTTTATCAGATCAACTCTATCGTTCTCCTGAGTACCATGGCGTTGTAAGAGAACAAGTTAATCAACAGCTCAGGAGTCACCCAGAAATGTATGAGGCTTATGTTCCTATGGCTTATACTGATTATCTAAAGAAGATGAGCAAGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCTGCGGCAGATTCGTATGGTGTCAAGGTATTTGTTATCACTTCCTTCAGGGATACATGTTACATTGAGATCCTTCCGCATGTTCAAAAGTCCAACAGAGTTATTTGCTTGAGCTTTTGGGCTGAGGTGCACTACAATTCCATTTATCCTGAAGGAGAACTTCCTCCGCCAAGCTTAAAGAAAAAGAAGAAATGGTGGAATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OTU

Protein Analysis

367

Amino Acids

41.91

Weight (kDa)

4.71

Isoelectric Point (pI)

44.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005498)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04250 AT5G04250
fragaria_vesca	FvH4_7g18921 FvH4_7g18921 FvH4_7g18921 FvH4_7g18921 FvH4_7g18921 FvH4_7g18921
malus_domestica	MD01G1105100.v1.1 MD07G1171600.v1.1
prunus_persica	Prupe.2G210400_v2.0.a1 Prupe.2G210400_v2.0.a1
pyrus_communis	pycom01g13160 pycom07g16570
rosa_chinensis	RchiOBHm_Chr1g0362861
rosa_laevigata	RLG00000027616
rosa_multiflora	Rmu_co8397651.1_g000001 Rmu_sc0001502.1_g000014
rosa_roxburghii	Rroxscaffold_4G00293700
rosa_rugosa	Rorug01G0302000.1 Rorug01G0302100 Rorug01G0302100 Rorug01G0302100 Rorug01G0302100
rosa_samantha	Rh1AG310900 Rh1BG274000 Rh1CG291200 Rh1DG304800
rosa_wichuraiana	Rw1G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	67
AciI	CCGC	3 cut(s)	899, 971, 1061
AclWI	GGATC	3 cut(s)	29, 422, 958
AcsI	RAATTY	2 cut(s)	277, 1093
AcuI	CTGAAG	2 cut(s)	925, 1065
AfaI	GTAC	4 cut(s)	82, 109, 212, 752
AfiI	CCNNNNNNNGG	1 cut(s)	67
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	4 cut(s)	321, 347, 562, 980
AjnI	CCWGG	2 cut(s)	126, 690
AluBI	AGCT	7 cut(s)	31, 99, 203, 617, 787, 1008, 1068
AluI	AGCT	7 cut(s)	31, 99, 203, 617, 787, 1008, 1068
Alw21I	GWGCWC	1 cut(s)	1026
Alw26I	GTCTC	3 cut(s)	62, 223, 430
Alw44I	GTGCAC	1 cut(s)	1022
AlwI	GGATC	3 cut(s)	29, 422, 958
ApaLI	GTGCAC	1 cut(s)	1022
ApeKI	GCWGC	1 cut(s)	896
ApoI	RAATTY	2 cut(s)	277, 1093
AspA2I	CCTAGG	1 cut(s)	431
AspS9I	GGNCC	2 cut(s)	314, 688
AsuHPI	GGTGA	4 cut(s)	554, 788, 878, 887
AsuII	TTCGAA	1 cut(s)	89
AvaII	GGWCC	2 cut(s)	314, 688
AvrII	CCTAGG	1 cut(s)	431
BaeGI	GKGCMC	1 cut(s)	1026
BarI	GAAGNNNNNNTAC	2 cut(s)	486, 518
BbsI	GAAGAC	1 cut(s)	501
Bbv12I	GWGCWC	1 cut(s)	1026
BbvCI	CCTCAGC	2 cut(s)	613, 1017
BbvI	GCAGC	1 cut(s)	883
BccI	CCATC	4 cut(s)	69, 266, 533, 692
BciT130I	CCWGG	2 cut(s)	128, 692
BciVI	GTATCC	1 cut(s)	940
BclI	TGATCA	1 cut(s)	877
BcoDI	GTCTC	3 cut(s)	62, 223, 430
BfaI	CTAG	3 cut(s)	296, 432, 591
BfmI	CTRYAG	2 cut(s)	240, 659
BfuI	GTATCC	1 cut(s)	940
BisI	GCNGC	2 cut(s)	897, 900
BlnI	CCTAGG	1 cut(s)	431
BlsI	GCNGC	2 cut(s)	898, 901
BmcAI	AGTACT	1 cut(s)	109
Bme1390I	CCNGG	2 cut(s)	128, 692
Bme18I	GGWCC	2 cut(s)	314, 688
BmgT120I	GGNCC	2 cut(s)	314, 688
BmrFI	CCNGG	2 cut(s)	128, 692
BmsI	GCATC	1 cut(s)	257
BpiI	GAAGAC	1 cut(s)	501
Bpu10I	CCTNAGC	3 cut(s)	613, 788, 1017
Bpu14I	TTCGAA	1 cut(s)	89
BpuEI	CTTGAG	1 cut(s)	1024
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	3 cut(s)	431, 691, 754
Bsc4I	CCNNNNNNNGG	1 cut(s)	67
Bse3DI	GCAATG	1 cut(s)	887
BseBI	CCWGG	2 cut(s)	128, 692
BseDI	CCNNGG	3 cut(s)	431, 691, 754
BseGI	GGATG	1 cut(s)	76
BseLI	CCNNNNNNNGG	1 cut(s)	67
BseMI	GCAATG	1 cut(s)	887
BseMII	CTCAG	5 cut(s)	218, 627, 738, 802, 1008
BseSI	GKGCMC	1 cut(s)	1026
BseXI	GCAGC	1 cut(s)	883
BseYI	CCCAGC	1 cut(s)	51
BsiHKAI	GWGCWC	1 cut(s)	1026
BslI	CCNNNNNNNGG	1 cut(s)	67
BsmAI	GTCTC	3 cut(s)	62, 223, 430
BsmI	GAATGC	1 cut(s)	482
Bso31I	GGTCTC	1 cut(s)	62
Bsp119I	TTCGAA	1 cut(s)	89
Bsp1286I	GDGCHC	1 cut(s)	1026
Bsp143I	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
Bsp19I	CCATGG	1 cut(s)	754
BspACI	CCGC	3 cut(s)	899, 971, 1061
BspCNI	CTCAG	5 cut(s)	217, 626, 739, 801, 1009
BspHI	TCATGA	1 cut(s)	15
BspMAI	CTGCAG	2 cut(s)	244, 663
BspPI	GGATC	3 cut(s)	29, 422, 958
BspT104I	TTCGAA	1 cut(s)	89
BspTNI	GGTCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	887
BssECI	CCNNGG	3 cut(s)	431, 691, 754
BssMI	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
BssT1I	CCWWGG	2 cut(s)	431, 754
Bst2UI	CCWGG	2 cut(s)	128, 692
Bst4CI	ACNGT	4 cut(s)	107, 112, 332, 707
Bst6I	CTCTTC	2 cut(s)	213, 618
BstBI	TTCGAA	1 cut(s)	89
BstC8I	GCNNGC	2 cut(s)	101, 894
BstDEI	CTNAG	5 cut(s)	204, 613, 747, 788, 1017
BstDSI	CCRYGG	1 cut(s)	754
BstF5I	GGATG	1 cut(s)	76
BstKTI	GATC	7 cut(s)	37, 430, 463, 637, 730, 880, 966
BstMAI	GTCTC	3 cut(s)	62, 223, 430
BstMBI	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
BstMWI	GCNNNNNNNGC	1 cut(s)	307
BstNI	CCWGG	2 cut(s)	128, 692
BstNSI	RCATGY	2 cut(s)	954, 977
BstSCI	CCNGG	2 cut(s)	126, 690
BstSFI	CTRYAG	2 cut(s)	240, 659
BstSLI	GKGCMC	1 cut(s)	1026
BstV1I	GCAGC	1 cut(s)	883
BstV2I	GAAGAC	1 cut(s)	501
BstX2I	RGATCY	1 cut(s)	963
BstXI	CCANNNNNNTGG	1 cut(s)	698
BstYI	RGATCY	1 cut(s)	963
BsuI	GTATCC	1 cut(s)	940
BtgI	CCRYGG	1 cut(s)	754
BtsCI	GGATG	1 cut(s)	76
BtsIMutI	CAGTG	2 cut(s)	337, 390
Cac8I	GCNNGC	2 cut(s)	101, 894
CciI	TCATGA	1 cut(s)	15
Cfr13I	GGNCC	2 cut(s)	314, 688
Csp6I	GTAC	4 cut(s)	81, 108, 211, 751
CviAII	CATG	6 cut(s)	16, 440, 755, 881, 951, 974
CviQI	GTAC	4 cut(s)	81, 108, 211, 751
DdeI	CTNAG	5 cut(s)	204, 613, 747, 788, 1017
DpnI	GATC	7 cut(s)	36, 429, 462, 636, 729, 879, 965
DpnII	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
Eam1104I	CTCTTC	2 cut(s)	213, 618
EarI	CTCTTC	2 cut(s)	213, 618
EciI	GGCGGA	1 cut(s)	1050
Eco130I	CCWWGG	2 cut(s)	431, 754
Eco31I	GGTCTC	1 cut(s)	62
Eco32I	GATATC	1 cut(s)	630
Eco47I	GGWCC	2 cut(s)	314, 688
Eco57I	CTGAAG	2 cut(s)	925, 1065
EcoRII	CCWGG	2 cut(s)	126, 690
EcoRV	GATATC	1 cut(s)	630
EcoT14I	CCWWGG	2 cut(s)	431, 754
ErhI	CCWWGG	2 cut(s)	431, 754
FaeI	CATG	6 cut(s)	19, 443, 758, 884, 954, 977
FalI	AAGNNNNNCTT	2 cut(s)	1038, 1070
FatI	CATG	6 cut(s)	15, 439, 754, 880, 950, 973
FbaI	TGATCA	1 cut(s)	877
Fnu4HI	GCNGC	2 cut(s)	897, 900
FokI	GGATG	1 cut(s)	83
Fsp4HI	GCNGC	2 cut(s)	897, 900
FspBI	CTAG	3 cut(s)	296, 432, 591
GluI	GCNGC	2 cut(s)	897, 900
GsaI	CCCAGC	1 cut(s)	55
Hin1II	CATG	6 cut(s)	19, 443, 758, 884, 954, 977
HindIII	AAGCTT	2 cut(s)	29, 1066
HinfI	GANTC	6 cut(s)	136, 284, 527, 562, 793, 905
HphI	GGTGA	4 cut(s)	554, 788, 878, 887
Hpy166II	GTNNAC	1 cut(s)	1024
Hpy188I	TCNGA	3 cut(s)	207, 634, 727
Hpy188III	TCNNGA	9 cut(s)	16, 38, 228, 252, 356, 536, 746, 790, 1043
Hpy8I	GTNNAC	1 cut(s)	1024
HpyAV	CCTTC	6 cut(s)	152, 327, 464, 949, 977, 1040
HpyCH4III	ACNGT	4 cut(s)	107, 112, 332, 707
HpyCH4IV	ACGT	2 cut(s)	42, 209
HpyCH4V	TGCA	5 cut(s)	177, 242, 661, 892, 1024
HpyF10VI	GCNNNNNNNGC	1 cut(s)	307
HpyF3I	CTNAG	5 cut(s)	204, 613, 747, 788, 1017
HpySE526I	ACGT	2 cut(s)	42, 209
Hsp92II	CATG	6 cut(s)	19, 443, 758, 884, 954, 977
Ksp22I	TGATCA	1 cut(s)	877
Kzo9I	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
Lsp1109I	GCAGC	1 cut(s)	883
LweI	GCATC	1 cut(s)	257
MaeI	CTAG	3 cut(s)	296, 432, 591
MaeII	ACGT	2 cut(s)	42, 209
MaeIII	GTNAC	6 cut(s)	3, 112, 701, 794, 883, 953
MalI	GATC	7 cut(s)	36, 429, 462, 636, 729, 879, 965
MboI	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
MboII	GAAGA	7 cut(s)	230, 281, 506, 567, 635, 862, 1093
MflI	RGATCY	1 cut(s)	963
MhlI	GDGCHC	1 cut(s)	1026
MluCI	AATT	4 cut(s)	277, 291, 1030, 1093
MlyI	GAGTC	3 cut(s)	145, 293, 802
MmeI	TCCRAC	1 cut(s)	1011
MnlI	CCTC	7 cut(s)	412, 442, 591, 622, 805, 1012, 1068
MseI	TTAA	2 cut(s)	777, 1070
MspA1I	CMGCKG	1 cut(s)	617
MspR9I	CCNGG	2 cut(s)	128, 692
Mva1269I	GAATGC	1 cut(s)	482
MvaI	CCWGG	2 cut(s)	128, 692
MwoI	GCNNNNNNNGC	1 cut(s)	307
NcoI	CCATGG	1 cut(s)	754
NdeII	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
NlaIII	CATG	6 cut(s)	19, 443, 758, 884, 954, 977
NmuCI	GTSAC	2 cut(s)	794, 883
NspI	RCATGY	2 cut(s)	954, 977
NspV	TTCGAA	1 cut(s)	89
PagI	TCATGA	1 cut(s)	15
PciI	ACATGT	1 cut(s)	950
PctI	GAATGC	1 cut(s)	482
PfeI	GAWTC	3 cut(s)	527, 562, 905
PflMI	CCANNNNNTGG	1 cut(s)	67
PkrI	GCNGC	2 cut(s)	898, 901
PleI	GAGTC	3 cut(s)	144, 292, 801
PpsI	GAGTC	3 cut(s)	144, 292, 801
PscI	ACATGT	1 cut(s)	950
Psp6I	CCWGG	2 cut(s)	126, 690
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	2 cut(s)	126, 690
PspPI	GGNCC	2 cut(s)	314, 688
PstI	CTGCAG	2 cut(s)	244, 663
PsuI	RGATCY	1 cut(s)	963
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	4 cut(s)	82, 109, 212, 752
RsaNI	GTAC	4 cut(s)	81, 108, 211, 751
SaqAI	TTAA	2 cut(s)	777, 1070
SatI	GCNGC	2 cut(s)	897, 900
Sau3AI	GATC	7 cut(s)	34, 427, 460, 634, 727, 877, 963
Sau96I	GGNCC	2 cut(s)	314, 688
ScaI	AGTACT	1 cut(s)	109
SchI	GAGTC	3 cut(s)	145, 293, 802
ScrFI	CCNGG	2 cut(s)	128, 692
SduI	GDGCHC	1 cut(s)	1026
SfaNI	GCATC	1 cut(s)	257
SfcI	CTRYAG	2 cut(s)	240, 659
SfuI	TTCGAA	1 cut(s)	89
SinI	GGWCC	2 cut(s)	314, 688
SmlI	CTYRAG	1 cut(s)	1003
SmoI	CTYRAG	1 cut(s)	1003
Sse9I	AATT	4 cut(s)	277, 291, 1030, 1093
SsiI	CCGC	3 cut(s)	899, 971, 1061
SspMI	CTAG	3 cut(s)	296, 432, 591
StyD4I	CCNGG	2 cut(s)	126, 690
StyI	CCWWGG	2 cut(s)	431, 754
TaaI	ACNGT	4 cut(s)	107, 112, 332, 707
TaiI	ACGT	2 cut(s)	45, 212
TaqI	TCGA	2 cut(s)	89, 227
TasI	AATT	4 cut(s)	277, 291, 1030, 1093
TatI	WGTACW	2 cut(s)	80, 107
TauI	GCSGC	1 cut(s)	902
TfiI	GAWTC	3 cut(s)	527, 562, 905
Tru1I	TTAA	2 cut(s)	777, 1070
Tru9I	TTAA	2 cut(s)	777, 1070
TscAI	CASTG	2 cut(s)	337, 397
TseFI	GTSAC	2 cut(s)	794, 883
TseI	GCWGC	1 cut(s)	896
Tsp45I	GTSAC	2 cut(s)	794, 883
TspDTI	ATGAA	3 cut(s)	498, 540, 636
TspRI	CASTG	2 cut(s)	337, 397
Van91I	CCANNNNNTGG	1 cut(s)	67
VneI	GTGCAC	1 cut(s)	1022
VpaK11BI	GGWCC	2 cut(s)	314, 688
XapI	RAATTY	2 cut(s)	277, 1093
XceI	RCATGY	2 cut(s)	954, 977
XmaJI	CCTAGG	1 cut(s)	431
XspI	CTAG	3 cut(s)	296, 432, 591
ZrmI	AGTACT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.