Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005979

Physical Location & Seq

Genomic Coordinates Reverse (-)

24966668 .. 24970342

Gene Structure 3675 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G221800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGTATCAACTACGCTAATGAAGCTTGTGGCACCGTGTTGGAAACCTTCTGTTGAGGGTGAAAATTCTAATAATAGAGGCGGGGACGTGAGTGGTCGGCTTGATGGTTTGTTGTGGCACAAAGATTCAGGACACCATGTTAACGGGGATTTCTCAATGGCGGTAATTCAAGCAAACAATTTGTTGGAAGACCATAGCCAACTTGAATCAGGGCCACTGAGCTCGCTCGAATCAGGTCCTCATGGAACATTTGTTGGAATTTATGATGGACATGGAGGTCCAGAAGCATCCCGGTTTTTAAATGAGCACTTGTTCAACAATTTTAAGACTATTCATGGTGCAGAATTCACATCAGAGAATCAGGGTATGTCCGCTGATGTTATCACCAAAGCATTTTTGGCAACTGAAGAGGAATTCCTCTCTCTAGTAAAGAAGCAGTGGATAATTAAGCCACTGCTTGCTTCTGTTGGTTCATGTTGTTTGGTAGGCGTAGTATGTAGTGGGCTGCTATACATAGCAAATGCGGGAGATTCTCGGGTGGTTTTAGGAAGACTGGAAAAGACCGTTAAACAGGTAAAAGCTGTTCAGTTATCAATCGAACACAATGCAAGTATAGAATCTGTGAGAGAGGAACTGCGCTCGTTGCATCCCGATGATCCACAGATTGTGGTACTAAAGCACAAGGTGTGGCGCGTGAAGGGTTTGATACAGGTTTCAAGGTCCATTGGCGATGCCTACCTGAAGCGGCAAGAATTTAACAAAGAACCTCTATTGGCAAAGTTTAGACTATCAGAACCCTTCCACAAGCCGATCCTTAAAGCTGAGCCAACAATATTAGTCCAAAAACTCTACCCTGAAGATCAGTTTCTCATATTTGCATCAGATGGCCTATGGGAGCAGTTAAGCAGTCAAGAGGCAGTTGACATTGTCCAGAACTATCCGCGTAATGGTATTGCAAGGAAACTTGTCAAAGCTGCGCTTCACGAAGCAGCCAAGAAGAGAGAAATGAGATACTCCGACTTAAAAAAGATCGACCGAGGGGTGAGGAGACATTTTCATGATGATATCACAGTGGTAGTGCTGTTCCTAGATTCGCATCTGGTCAGTCGTAGCCACTGGCATGGGCCTCTGCTTTCAGTTAAGGGAAGTGGCGGTGTCCCTGCCAGCACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0016020 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0043900 GO:0043901 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0071944 GO:0080134 GO:1900424 GO:1900425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_C_2 PP2C

Protein Analysis

391

Amino Acids

43.27

Weight (kDa)

7.79

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12620 AT3G12620 AT3G55050 AT3G55050
fragaria_vesca	FvH4_7g20640 FvH4_7g20640 FvH4_7g20640
malus_domestica	MD01G1115100.v1.1 MD07G1183100.v1.1
prunus_persica	Prupe.2G221800_v2.0.a1 Prupe.2G221800_v2.0.a1 Prupe.2G221800_v2.0.a1 Prupe.2G221800_v2.0.a1
pyrus_communis	pycom01g14400 pycom07g17570
rosa_chinensis	RchiOBHm_Chr1g0364671
rosa_laevigata	RLG00000027468
rosa_multiflora	Rmu_sc0024218.1_g000002
rosa_roxburghii	Rroxscaffold_4G00291760 Rroxscaffold_4G00292180
rosa_rugosa	Rorug01G0317500 Rorug01G0317600
rosa_samantha	Rh1AG326600 Rh1BG287800 Rh1CG304600 Rh1DG319500
rosa_wichuraiana	Rw1G028930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	276
AccB1I	GGYRCC	1 cut(s)	31
AccII	CGCG	2 cut(s)	693, 943
AciI	CCGC	7 cut(s)	81, 161, 372, 524, 745, 941, 1152
AclWI	GGATC	2 cut(s)	650, 805
AcsI	RAATTY	5 cut(s)	64, 258, 344, 413, 752
AcuI	CTGAAG	3 cut(s)	426, 761, 876
AdeI	CACNNNGTG	1 cut(s)	685
AfaI	GTAC	1 cut(s)	672
AfiI	CCNNNNNNNGG	1 cut(s)	947
AgsI	TTSAA	4 cut(s)	170, 206, 316, 717
AjiI	CACGTC	1 cut(s)	88
AluBI	AGCT	5 cut(s)	25, 222, 581, 821, 974
AluI	AGCT	5 cut(s)	25, 222, 581, 821, 974
Alw21I	GWGCWC	2 cut(s)	224, 309
Alw26I	GTCTC	1 cut(s)	1042
AlwI	GGATC	2 cut(s)	650, 805
Ama87I	CYCGRG	1 cut(s)	534
AoxI	GGCC	3 cut(s)	212, 886, 1124
ApeKI	GCWGC	3 cut(s)	505, 974, 989
ApoI	RAATTY	5 cut(s)	64, 258, 344, 413, 752
AspLEI	GCGC	3 cut(s)	639, 693, 979
AspS9I	GGNCC	5 cut(s)	212, 236, 278, 720, 1124
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	3 cut(s)	71, 376, 1054
AvaI	CYCGRG	1 cut(s)	534
AvaII	GGWCC	3 cut(s)	236, 278, 720
BanI	GGYRCC	1 cut(s)	31
BanII	GRGCYC	1 cut(s)	224
BbsI	GAAGAC	2 cut(s)	195, 556
Bbv12I	GWGCWC	2 cut(s)	224, 309
BbvI	GCAGC	3 cut(s)	492, 961, 1001
BccI	CCATC	3 cut(s)	98, 260, 878
BcgI	CGANNNNNNTGC	2 cut(s)	587, 621
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	1 cut(s)	1042
BfaI	CTAG	3 cut(s)	425, 1088, 1171
BisI	GCNGC	4 cut(s)	506, 746, 975, 990
BlpI	GCTNAGC	1 cut(s)	822
BlsI	GCNGC	4 cut(s)	507, 747, 976, 991
Bme1390I	CCNGG	1 cut(s)	292
Bme18I	GGWCC	3 cut(s)	236, 278, 720
BmeT110I	CYCGRG	1 cut(s)	534
BmgBI	CACGTC	1 cut(s)	88
BmgT120I	GGNCC	5 cut(s)	212, 236, 278, 720, 1124
BmiI	GGNNCC	1 cut(s)	33
BmrFI	CCNGG	1 cut(s)	292
BmsI	GCATC	5 cut(s)	296, 655, 721, 887, 1105
BpiI	GAAGAC	2 cut(s)	195, 556
Bpu1102I	GCTNAGC	1 cut(s)	822
BpuMI	CCSGG	1 cut(s)	292
BsaBI	GATNNNNATC	1 cut(s)	1095
BsaJI	CCNNGG	1 cut(s)	1036
Bsc4I	CCNNNNNNNGG	1 cut(s)	947
Bse1I	ACTGG	2 cut(s)	558, 1121
Bse8I	GATNNNNATC	1 cut(s)	1095
BseDI	CCNNGG	1 cut(s)	1036
BseGI	GGATG	2 cut(s)	287, 646
BseJI	GATNNNNATC	1 cut(s)	1095
BseLI	CCNNNNNNNGG	1 cut(s)	947
BseMII	CTCAG	2 cut(s)	209, 813
BseNI	ACTGG	2 cut(s)	558, 1121
BseRI	GAGGAG	1 cut(s)	1060
BseXI	GCAGC	3 cut(s)	492, 961, 1001
BsgI	GTGCAG	1 cut(s)	360
Bsh1236I	CGCG	2 cut(s)	693, 943
Bsh1285I	CGRYCG	1 cut(s)	1036
BshFI	GGCC	3 cut(s)	214, 888, 1126
BshNI	GGYRCC	1 cut(s)	31
BsiEI	CGRYCG	1 cut(s)	1036
BsiHKAI	GWGCWC	2 cut(s)	224, 309
BsiHKCI	CYCGRG	1 cut(s)	534
BsiSI	CCGG	1 cut(s)	292
BslFI	GGGAC	2 cut(s)	98, 1142
BslI	CCNNNNNNNGG	1 cut(s)	947
BsmAI	GTCTC	1 cut(s)	1042
BsmFI	GGGAC	2 cut(s)	98, 1142
BsnI	GGCC	3 cut(s)	214, 888, 1126
BsoBI	CYCGRG	1 cut(s)	534
Bsp1286I	GDGCHC	2 cut(s)	224, 309
Bsp143I	GATC	4 cut(s)	655, 810, 859, 1029
Bsp1720I	GCTNAGC	1 cut(s)	822
BspACI	CCGC	7 cut(s)	81, 161, 372, 524, 745, 941, 1152
BspANI	GGCC	3 cut(s)	214, 888, 1126
BspCNI	CTCAG	2 cut(s)	210, 814
BspFNI	CGCG	2 cut(s)	693, 943
BspHI	TCATGA	1 cut(s)	1057
BspLI	GGNNCC	1 cut(s)	33
BspPI	GGATC	2 cut(s)	650, 805
BspT107I	GGYRCC	1 cut(s)	31
BsrI	ACTGG	2 cut(s)	558, 1121
BssECI	CCNNGG	1 cut(s)	1036
BssMI	GATC	4 cut(s)	655, 810, 859, 1029
Bst4CI	ACNGT	3 cut(s)	36, 565, 1072
Bst6I	CTCTTC	2 cut(s)	402, 992
BstC8I	GCNNGC	3 cut(s)	224, 459, 1165
BstDEI	CTNAG	2 cut(s)	218, 822
BstF5I	GGATG	2 cut(s)	287, 646
BstFNI	CGCG	2 cut(s)	693, 943
BstHHI	GCGC	3 cut(s)	639, 693, 979
BstKTI	GATC	4 cut(s)	658, 813, 862, 1032
BstMAI	GTCTC	1 cut(s)	1042
BstMBI	GATC	4 cut(s)	655, 810, 859, 1029
BstMCI	CGRYCG	1 cut(s)	1036
BstMWI	GCNNNNNNNGC	3 cut(s)	22, 398, 643
BstSCI	CCNGG	1 cut(s)	290
BstUI	CGCG	2 cut(s)	693, 943
BstV1I	GCAGC	3 cut(s)	492, 961, 1001
BstV2I	GAAGAC	2 cut(s)	195, 556
BstXI	CCANNNNNNTGG	1 cut(s)	1121
BsuRI	GGCC	3 cut(s)	214, 888, 1126
BtgZI	GCGATG	1 cut(s)	744
BtrI	CACGTC	1 cut(s)	88
BtsCI	GGATG	2 cut(s)	287, 646
BtsI	GCAGTG	2 cut(s)	443, 452
BtsIMutI	CAGTG	5 cut(s)	215, 443, 452, 1077, 1114
Cac8I	GCNNGC	3 cut(s)	224, 459, 1165
CciI	TCATGA	1 cut(s)	1057
CfoI	GCGC	3 cut(s)	639, 693, 979
Cfr13I	GGNCC	5 cut(s)	212, 236, 278, 720, 1124
Csp6I	GTAC	1 cut(s)	671
CviAII	CATG	7 cut(s)	137, 242, 272, 335, 474, 1058, 1121
CviQI	GTAC	1 cut(s)	671
DdeI	CTNAG	2 cut(s)	218, 822
DpnI	GATC	4 cut(s)	657, 812, 861, 1031
DpnII	GATC	4 cut(s)	655, 810, 859, 1029
DraI	TTTAAA	1 cut(s)	300
DraIII	CACNNNGTG	1 cut(s)	685
DrdI	GACNNNNNNGTC	1 cut(s)	276
DseDI	GACNNNNNNGTC	1 cut(s)	276
Eam1104I	CTCTTC	2 cut(s)	402, 992
EarI	CTCTTC	2 cut(s)	402, 992
Ecl136II	GAGCTC	1 cut(s)	222
Eco24I	GRGCYC	1 cut(s)	224
Eco32I	GATATC	1 cut(s)	1066
Eco47I	GGWCC	3 cut(s)	236, 278, 720
Eco53kI	GAGCTC	1 cut(s)	222
Eco57I	CTGAAG	3 cut(s)	426, 761, 876
Eco88I	CYCGRG	1 cut(s)	534
EcoICRI	GAGCTC	1 cut(s)	222
EcoO109I	RGGNCCY	1 cut(s)	236
EcoRI	GAATTC	2 cut(s)	344, 413
EcoRV	GATATC	1 cut(s)	1066
EcoT38I	GRGCYC	1 cut(s)	224
FaeI	CATG	7 cut(s)	140, 245, 275, 338, 477, 1061, 1124
FalI	AAGNNNNNCTT	2 cut(s)	963, 995
FaqI	GGGAC	2 cut(s)	98, 1142
FatI	CATG	7 cut(s)	136, 241, 271, 334, 473, 1057, 1120
FauI	CCCGC	2 cut(s)	74, 517
Fnu4HI	GCNGC	4 cut(s)	506, 746, 975, 990
FokI	GGATG	2 cut(s)	274, 633
FriOI	GRGCYC	1 cut(s)	224
Fsp4HI	GCNGC	4 cut(s)	506, 746, 975, 990
FspBI	CTAG	3 cut(s)	425, 1088, 1171
GlaI	GCGC	3 cut(s)	638, 692, 978
GluI	GCNGC	4 cut(s)	506, 746, 975, 990
HaeIII	GGCC	3 cut(s)	214, 888, 1126
HapII	CCGG	1 cut(s)	292
HhaI	GCGC	3 cut(s)	639, 693, 979
Hin1II	CATG	7 cut(s)	140, 245, 275, 338, 477, 1061, 1124
Hin6I	GCGC	3 cut(s)	637, 691, 977
HinP1I	GCGC	3 cut(s)	637, 691, 977
HincII	GTYRAC	2 cut(s)	142, 922
HindII	GTYRAC	2 cut(s)	142, 922
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	7 cut(s)	125, 206, 230, 358, 530, 617, 1091
HpaI	GTTAAC	1 cut(s)	142
HpaII	CCGG	1 cut(s)	292
HphI	GGTGA	3 cut(s)	71, 376, 1054
Hpy166II	GTNNAC	2 cut(s)	142, 922
Hpy188I	TCNGA	4 cut(s)	355, 793, 883, 1018
Hpy188III	TCNNGA	7 cut(s)	129, 281, 650, 911, 931, 983, 1058
Hpy8I	GTNNAC	2 cut(s)	142, 922
HpyAV	CCTTC	3 cut(s)	57, 691, 808
HpyCH4III	ACNGT	3 cut(s)	36, 565, 1072
HpyCH4IV	ACGT	1 cut(s)	87
HpyCH4V	TGCA	5 cut(s)	341, 608, 646, 878, 956
HpyF10VI	GCNNNNNNNGC	3 cut(s)	22, 398, 643
HpyF3I	CTNAG	2 cut(s)	218, 822
HpySE526I	ACGT	1 cut(s)	87
Hsp92II	CATG	7 cut(s)	140, 245, 275, 338, 477, 1061, 1124
HspAI	GCGC	3 cut(s)	637, 691, 977
KspAI	GTTAAC	1 cut(s)	142
Kzo9I	GATC	4 cut(s)	655, 810, 859, 1029
LmnI	GCTCC	1 cut(s)	895
Lsp1109I	GCAGC	3 cut(s)	492, 961, 1001
LweI	GCATC	5 cut(s)	296, 655, 721, 887, 1105
MaeI	CTAG	3 cut(s)	425, 1088, 1171
MaeII	ACGT	1 cut(s)	87
MalI	GATC	4 cut(s)	657, 812, 861, 1031
MboI	GATC	4 cut(s)	655, 810, 859, 1029
MboII	GAAGA	5 cut(s)	200, 419, 561, 869, 1009
MhlI	GDGCHC	2 cut(s)	224, 309
MluCI	AATT	9 cut(s)	64, 165, 178, 258, 319, 344, 413, 444, 752
MmeI	TCCRAC	4 cut(s)	20, 165, 235, 1041
MslI	CAYNNNNRTG	3 cut(s)	651, 1056, 1119
MspA1I	CMGCKG	1 cut(s)	374
MspI	CCGG	1 cut(s)	292
MspR9I	CCNGG	1 cut(s)	292
MvnI	CGCG	2 cut(s)	693, 943
MwoI	GCNNNNNNNGC	3 cut(s)	22, 398, 643
NciI	CCSGG	1 cut(s)	292
NdeII	GATC	4 cut(s)	655, 810, 859, 1029
NlaIII	CATG	7 cut(s)	140, 245, 275, 338, 477, 1061, 1124
NlaIV	GGNNCC	1 cut(s)	33
PagI	TCATGA	1 cut(s)	1057
PfeI	GAWTC	7 cut(s)	125, 206, 230, 358, 530, 617, 1091
PflFI	GACNNNGTC	1 cut(s)	926
PkrI	GCNGC	4 cut(s)	507, 747, 976, 991
PpuMI	RGGWCCY	1 cut(s)	236
Psp124BI	GAGCTC	1 cut(s)	224
Psp5II	RGGWCCY	1 cut(s)	236
PspN4I	GGNNCC	1 cut(s)	33
PspPI	GGNCC	5 cut(s)	212, 236, 278, 720, 1124
PspPPI	RGGWCCY	1 cut(s)	236
PsrI	GAACNNNNNNTAC	2 cut(s)	567, 599
PsyI	GACNNNGTC	1 cut(s)	926
RsaI	GTAC	1 cut(s)	672
RsaNI	GTAC	1 cut(s)	671
RseI	CAYNNNNRTG	3 cut(s)	651, 1056, 1119
SacI	GAGCTC	1 cut(s)	224
SatI	GCNGC	4 cut(s)	506, 746, 975, 990
Sau3AI	GATC	4 cut(s)	655, 810, 859, 1029
Sau96I	GGNCC	5 cut(s)	212, 236, 278, 720, 1124
ScrFI	CCNGG	1 cut(s)	292
SduI	GDGCHC	2 cut(s)	224, 309
SfaNI	GCATC	5 cut(s)	296, 655, 721, 887, 1105
SinI	GGWCC	3 cut(s)	236, 278, 720
SmiMI	CAYNNNNRTG	3 cut(s)	651, 1056, 1119
Sse9I	AATT	9 cut(s)	64, 165, 178, 258, 319, 344, 413, 444, 752
SsiI	CCGC	7 cut(s)	81, 161, 372, 524, 745, 941, 1152
SspI	AATATT	1 cut(s)	834
SspMI	CTAG	3 cut(s)	425, 1088, 1171
SstI	GAGCTC	1 cut(s)	224
StyD4I	CCNGG	1 cut(s)	290
TaaI	ACNGT	3 cut(s)	36, 565, 1072
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	3 cut(s)	228, 597, 1032
TaqII	GACCGA	1 cut(s)	1050
TasI	AATT	9 cut(s)	64, 165, 178, 258, 319, 344, 413, 444, 752
TauI	GCSGC	1 cut(s)	748
TfiI	GAWTC	7 cut(s)	125, 206, 230, 358, 530, 617, 1091
TscAI	CASTG	5 cut(s)	222, 443, 459, 1077, 1121
TseI	GCWGC	3 cut(s)	505, 974, 989
TspDTI	ATGAA	4 cut(s)	35, 323, 462, 1046
TspRI	CASTG	5 cut(s)	222, 443, 459, 1077, 1121
Tth111I	GACNNNGTC	1 cut(s)	926
VpaK11BI	GGWCC	3 cut(s)	236, 278, 720
XapI	RAATTY	5 cut(s)	64, 258, 344, 413, 752
XcmI	CCANNNNNNNNNTGG	1 cut(s)	394
XspI	CTAG	3 cut(s)	425, 1088, 1171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.