Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005276

Physical Location & Seq

Genomic Coordinates Forward (+)

25038938 .. 25040037

Gene Structure 1100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G222800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 528 bp

ATGGCTTCCGCTCACGGTGATTTAGAGAACGCTGAAGCAAGAACAGATTATCCAAATTCAAACCAGACAACGGAAAATTCTTCCACGAGAGATGTAGAGGTGAAAAATTCAAAAAATGCAGCACGGTTGACTAAAATATTTATAACATCATGTGTGCTTGGCGTTTTCCTGGATCCTTTGTTCCTCTACATTCCTCTCCTCAACCACGATTTGAAGTGTCTGAGGTTGGACAACACCATAAAGATTATCGCTCTCGTCTCGCGATTGTTCACTGATCTATTTTATGTAGGCAGAATAATTTTGCAAGTTTGTAGATTTGAAAATTGTTCGCCTTTCATGAATCGAATTCTTCCCGAAAGTTGCTCCTCCAAGTTAATAACATCATTCATCAAATGCTTTCGTGAGTTATTACCTGAAGTAACTGAAGTTCATGAGAAGGAATATCTAATACCAAGTATAACAAAGGAGATACTGGAGTCGTCCATCATAGTTGACATTTTAGCTATTCTTCCTCTTCCACAGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans Pkinase_Tyr cNMP_binding

Protein Analysis

176

Amino Acids

19.85

Weight (kDa)

5.64

Isoelectric Point (pI)

39.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005276)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20180 FvH4_7g20190 FvH4_7g20190 FvH4_7g20190 FvH4_7g20221
malus_domestica	MD01G1131600.v1.1 MD07G1179700.v1.1
prunus_persica	Prupe.2G219100_v2.0.a1 Prupe.2G219100_v2.0.a1 Prupe.2G222400_v2.0.a1 Prupe.2G222500_v2.0.a1 Prupe.2G222500_v2.0.a1 Prupe.2G222500_v2.0.a1 Prupe.2G222600_v2.0.a1 Prupe.2G222600_v2.0.a1 Prupe.2G222600_v2.0.a1 Prupe.2G222800_v2.0.a1 Prupe.2G222900_v2.0.a1 Prupe.2G223000_v2.0.a1
pyrus_communis	pycom01g14040 pycom07g17320
rosa_chinensis	RchiOBHm_Chr1g0364171
rosa_laevigata	RLG00000027510 RLG00000027511 RLG00000027512
rosa_roxburghii	Rroxscaffold_4G00292590
rosa_rugosa	Rorug01G0314100
rosa_samantha	Rh1AG321400
rosa_wichuraiana	Rw1G028510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	143
AccBSI	CCGCTC	1 cut(s)	11
AccII	CGCG	1 cut(s)	262
AciI	CCGC	1 cut(s)	9
AclWI	GGATC	2 cut(s)	167, 180
AcsI	RAATTY	4 cut(s)	55, 76, 106, 345
AcuI	CTGAAG	3 cut(s)	54, 435, 444
AfiI	CCNNNNNNNGG	1 cut(s)	70
AgsI	TTSAA	4 cut(s)	60, 111, 214, 320
AjnI	CCWGG	1 cut(s)	168
AloI	GAACNNNNNNTCC	4 cut(s)	34, 66, 164, 196
AluBI	AGCT	1 cut(s)	503
AluI	AGCT	1 cut(s)	503
Alw26I	GTCTC	1 cut(s)	262
AlwI	GGATC	2 cut(s)	167, 180
ApeKI	GCWGC	1 cut(s)	119
ApoI	RAATTY	4 cut(s)	55, 76, 106, 345
AsuHPI	GGTGA	2 cut(s)	29, 112
BaeI	ACNNNNGTAYC	2 cut(s)	461, 494
BamHI	GGATCC	1 cut(s)	172
BauI	CACGAG	1 cut(s)	85
BbvI	GCAGC	1 cut(s)	131
BccI	CCATC	1 cut(s)	491
BciT130I	CCWGG	1 cut(s)	170
BcoDI	GTCTC	1 cut(s)	262
BisI	GCNGC	1 cut(s)	120
BlsI	GCNGC	1 cut(s)	121
Bme1390I	CCNGG	1 cut(s)	170
BmiI	GGNNCC	1 cut(s)	174
BmrFI	CCNGG	1 cut(s)	170
BpmI	CTGGAG	1 cut(s)	494
Bsc4I	CCNNNNNNNGG	1 cut(s)	70
Bse1I	ACTGG	1 cut(s)	477
BseBI	CCWGG	1 cut(s)	170
BseLI	CCNNNNNNNGG	1 cut(s)	70
BseMII	CTCAG	1 cut(s)	212
BseNI	ACTGG	1 cut(s)	477
BseRI	GAGGAG	2 cut(s)	188, 355
BseXI	GCAGC	1 cut(s)	131
Bsh1236I	CGCG	1 cut(s)	262
BslI	CCNNNNNNNGG	1 cut(s)	70
BsmAI	GTCTC	1 cut(s)	262
BsmBI	CGTCTC	1 cut(s)	262
Bsp143I	GATC	2 cut(s)	172, 274
Bsp68I	TCGCGA	1 cut(s)	262
BspACI	CCGC	1 cut(s)	9
BspCNI	CTCAG	1 cut(s)	213
BspFNI	CGCG	1 cut(s)	262
BspHI	TCATGA	2 cut(s)	336, 430
BspLI	GGNNCC	1 cut(s)	174
BspPI	GGATC	2 cut(s)	167, 180
BsrBI	CCGCTC	1 cut(s)	11
BsrI	ACTGG	1 cut(s)	477
BssMI	GATC	2 cut(s)	172, 274
BssSI	CACGAG	1 cut(s)	85
Bst2BI	CACGAG	1 cut(s)	85
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	2 cut(s)	17, 126
Bst6I	CTCTTC	1 cut(s)	519
BstDEI	CTNAG	1 cut(s)	221
BstFNI	CGCG	1 cut(s)	262
BstKTI	GATC	2 cut(s)	175, 277
BstMAI	GTCTC	1 cut(s)	262
BstMBI	GATC	2 cut(s)	172, 274
BstNI	CCWGG	1 cut(s)	170
BstSCI	CCNGG	1 cut(s)	168
BstUI	CGCG	1 cut(s)	262
BstV1I	GCAGC	1 cut(s)	131
BstX2I	RGATCY	1 cut(s)	172
BstYI	RGATCY	1 cut(s)	172
BtsIMutI	CAGTG	1 cut(s)	270
BtuMI	TCGCGA	1 cut(s)	262
CciI	TCATGA	2 cut(s)	336, 430
CviAII	CATG	3 cut(s)	150, 337, 431
CviJI	RGCY	2 cut(s)	5, 503
CviKI_1	RGCY	2 cut(s)	5, 503
DdeI	CTNAG	1 cut(s)	221
DpnI	GATC	2 cut(s)	174, 276
DpnII	GATC	2 cut(s)	172, 274
Eam1104I	CTCTTC	1 cut(s)	519
EarI	CTCTTC	1 cut(s)	519
Eco57I	CTGAAG	3 cut(s)	54, 435, 444
EcoRI	GAATTC	1 cut(s)	345
EcoRII	CCWGG	1 cut(s)	168
Esp3I	CGTCTC	1 cut(s)	262
FaeI	CATG	3 cut(s)	153, 340, 434
FaiI	YATR	9 cut(s)	143, 151, 239, 285, 338, 432, 458, 488, 526
FatI	CATG	3 cut(s)	149, 336, 430
Fnu4HI	GCNGC	1 cut(s)	120
Fsp4HI	GCNGC	1 cut(s)	120
GluI	GCNGC	1 cut(s)	120
GsuI	CTGGAG	1 cut(s)	494
Hin1II	CATG	3 cut(s)	153, 340, 434
HincII	GTYRAC	2 cut(s)	129, 493
HindII	GTYRAC	2 cut(s)	129, 493
HinfI	GANTC	2 cut(s)	340, 476
HphI	GGTGA	2 cut(s)	29, 112
Hpy166II	GTNNAC	3 cut(s)	129, 270, 493
Hpy188I	TCNGA	1 cut(s)	222
Hpy188III	TCNNGA	5 cut(s)	261, 337, 353, 401, 431
Hpy8I	GTNNAC	3 cut(s)	129, 270, 493
HpyAV	CCTTC	1 cut(s)	430
HpyCH4III	ACNGT	2 cut(s)	17, 126
HpyCH4V	TGCA	2 cut(s)	119, 304
HpyF3I	CTNAG	1 cut(s)	221
Hsp92II	CATG	3 cut(s)	153, 340, 434
Kzo9I	GATC	2 cut(s)	172, 274
LmnI	GCTCC	1 cut(s)	368
LpnPI	CCDG	6 cut(s)	77, 155, 182, 426, 458, 506
Lsp1109I	GCAGC	1 cut(s)	131
MaeIII	GTNAC	1 cut(s)	418
MalI	GATC	2 cut(s)	174, 276
MbiI	CCGCTC	1 cut(s)	11
MboI	GATC	2 cut(s)	172, 274
MboII	GAAGA	4 cut(s)	72, 341, 500, 506
MflI	RGATCY	1 cut(s)	172
MluCI	AATT	6 cut(s)	55, 76, 106, 297, 322, 345
MlyI	GAGTC	1 cut(s)	485
MmeI	TCCRAC	1 cut(s)	207
MnlI	CCTC	7 cut(s)	91, 194, 204, 209, 216, 376, 522
MseI	TTAA	1 cut(s)	374
MslI	CAYNNNNRTG	1 cut(s)	523
MspR9I	CCNGG	1 cut(s)	170
MvaI	CCWGG	1 cut(s)	170
MvnI	CGCG	1 cut(s)	262
NdeII	GATC	2 cut(s)	172, 274
NlaIII	CATG	3 cut(s)	153, 340, 434
NlaIV	GGNNCC	1 cut(s)	174
NruI	TCGCGA	1 cut(s)	262
PagI	TCATGA	2 cut(s)	336, 430
PfeI	GAWTC	1 cut(s)	340
PfoI	TCCNGGA	1 cut(s)	168
PkrI	GCNGC	1 cut(s)	121
PleI	GAGTC	1 cut(s)	484
PpsI	GAGTC	1 cut(s)	484
PsiI	TTATAA	1 cut(s)	143
Psp6I	CCWGG	1 cut(s)	168
PspGI	CCWGG	1 cut(s)	168
PspN4I	GGNNCC	1 cut(s)	174
PsrI	GAACNNNNNNTAC	2 cut(s)	411, 443
PsuI	RGATCY	1 cut(s)	172
RruI	TCGCGA	1 cut(s)	262
RseI	CAYNNNNRTG	1 cut(s)	523
SaqAI	TTAA	1 cut(s)	374
SatI	GCNGC	1 cut(s)	120
Sau3AI	GATC	2 cut(s)	172, 274
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	1 cut(s)	170
SetI	ASST	5 cut(s)	102, 227, 415, 505, 525
SmiMI	CAYNNNNRTG	1 cut(s)	523
Sse9I	AATT	6 cut(s)	55, 76, 106, 297, 322, 345
SsiI	CCGC	1 cut(s)	9
SspI	AATATT	1 cut(s)	138
StyD4I	CCNGG	1 cut(s)	168
TaaI	ACNGT	2 cut(s)	17, 126
TaqI	TCGA	1 cut(s)	343
TasI	AATT	6 cut(s)	55, 76, 106, 297, 322, 345
TfiI	GAWTC	1 cut(s)	340
Tru1I	TTAA	1 cut(s)	374
Tru9I	TTAA	1 cut(s)	374
TscAI	CASTG	1 cut(s)	277
TseI	GCWGC	1 cut(s)	119
TspDTI	ATGAA	4 cut(s)	325, 353, 376, 419
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	1 cut(s)	277
XapI	RAATTY	4 cut(s)	55, 76, 106, 345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.