Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014803

Physical Location & Seq

Genomic Coordinates Forward (+)

26648362 .. 26649790

Gene Structure 1429 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G252700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 720 bp

ATGAGCGTGATCAACAGTGATGAGGATCGAGTGAAGGGGTCGTGGAGCCCACAAGAGGACTCCACGCTCATCAAGCTGGTGGCCCAGCACGGCCCACGCAACTGGTCCCTCATCAGCACCGGCATCCCCGGCCGCTCAGGCAAGTCCTGCCGCCTTCGGTGGTGCAACCAGCTCAGCCCCACCGTCCAGCACAAGTCCTTTACGCCGCAAGAGGACAACATTATCGTCCGGGCCCACGCCCTCCACGGCAACAAGTGGGCCACCATCGCCCGCCTCCTCCCCGGCCGAACAGATAATGCCATCAAGAACCACTGGAACTCCACGCTACGGCGTCGTCGCCAACTCGCCGAGTTGTCGTCCGCGTCGTCCGATTCCAACTCGGTCGCACAGATCAGGTACGAGCCGGGCATGAAGCGGCAGTGCCTGAGGGCGTCGCCGGAGCCCGATAGCTTTAAAGCGGACGTGGGAGGGGACGGGGTGGTAGAAACGTCGCTGACGCTGTTGCCACCTGGCGAGAAGGAGGAAAACGAGGTCATTTTGAAGAGCGAGGATCATGATGACGAGGGAAAATGTGCTGTGGAGATGGAAGAGACGTGTTTGCTAACGATCATGCAGCGGATGATAGCCCAGGAGGTGAGGAATTACGTTGATGGCTTACGGGCCGAGGCTGGACCCACGTCGTTTGGGCTTCAGTCAGCAGGGCTCCAAAATGATCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04151 ko05166 map04151 map05166

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

240

Amino Acids

26.47

Weight (kDa)

6.1

Isoelectric Point (pI)

57.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014803)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g24730
malus_domestica	MD01G1155100.v1.1 MD07G1224200.v1.1
prunus_persica	Prupe.2G252700_v2.0.a1
pyrus_communis	pycom01g17250 pycom07g20280
rosa_chinensis	RchiOBHm_Chr1g0370581
rosa_laevigata	RLG00000027025
rosa_multiflora	Rmu_co8167220.1_g000001 Rmu_sc0002021.1_g000013 Rmu_sc0033719.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286410
rosa_rugosa	Rorug01G0357600
rosa_samantha	Rh1AG367100 Rh1BG330600 Rh1DG362100
rosa_wichuraiana	Rw1G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	135
AccII	CGCG	1 cut(s)	362
AciI	CCGC	8 cut(s)	133, 151, 206, 271, 360, 415, 458, 616
AclWI	GGATC	3 cut(s)	33, 558, 707
AcoI	YGGCCR	2 cut(s)	130, 283
AcuI	CTGAAG	1 cut(s)	674
AcyI	GRCGYC	2 cut(s)	331, 431
AfaI	GTAC	1 cut(s)	398
AfiI	CCNNNNNNNGG	2 cut(s)	55, 327
AflIII	ACRYGT	1 cut(s)	593
AgsI	TTSAA	1 cut(s)	541
AjiI	CACGTC	3 cut(s)	463, 594, 678
AjnI	CCWGG	2 cut(s)	508, 627
AluBI	AGCT	3 cut(s)	76, 172, 450
AluI	AGCT	3 cut(s)	76, 172, 450
Alw26I	GTCTC	1 cut(s)	584
AlwI	GGATC	3 cut(s)	33, 558, 707
AlwNI	CAGNNNCTG	1 cut(s)	424
AoxI	GGCC	7 cut(s)	81, 91, 130, 231, 258, 283, 660
ApaI	GGGCCC	1 cut(s)	235
ApeKI	GCWGC	1 cut(s)	613
AspS9I	GGNCC	8 cut(s)	82, 92, 105, 231, 232, 258, 660, 671
AsuC2I	CCSGG	4 cut(s)	129, 230, 282, 405
AsuHPI	GGTGA	1 cut(s)	646
AvaII	GGWCC	2 cut(s)	105, 671
AxyI	CCTNAGG	1 cut(s)	425
BaeGI	GKGCMC	1 cut(s)	235
BanII	GRGCYC	4 cut(s)	50, 235, 444, 705
BbvI	GCAGC	1 cut(s)	625
BccI	CCATC	4 cut(s)	272, 308, 577, 644
BceAI	ACGGC	3 cut(s)	106, 262, 344
BciT130I	CCWGG	2 cut(s)	510, 629
BclI	TGATCA	1 cut(s)	9
BcnI	CCSGG	4 cut(s)	129, 230, 282, 405
BcoDI	GTCTC	1 cut(s)	584
BglI	GCCNNNNNGGC	1 cut(s)	138
BisI	GCNGC	5 cut(s)	133, 151, 206, 416, 614
BlpI	GCTNAGC	1 cut(s)	173
BlsI	GCNGC	5 cut(s)	134, 152, 207, 417, 615
Bme1390I	CCNGG	6 cut(s)	129, 230, 282, 405, 510, 629
Bme18I	GGWCC	2 cut(s)	105, 671
BmgBI	CACGTC	3 cut(s)	463, 594, 678
BmgT120I	GGNCC	8 cut(s)	82, 92, 105, 231, 232, 258, 660, 671
BmiI	GGNNCC	6 cut(s)	47, 107, 233, 441, 673, 704
BmrFI	CCNGG	6 cut(s)	129, 230, 282, 405, 510, 629
BmsI	GCATC	1 cut(s)	132
BoxI	GACNNNNGTC	1 cut(s)	676
Bpu10I	CCTNAGC	1 cut(s)	136
Bpu1102I	GCTNAGC	1 cut(s)	173
BpuMI	CCSGG	4 cut(s)	129, 230, 282, 405
BsaBI	GATNNNNATC	1 cut(s)	24
BsaHI	GRCGYC	2 cut(s)	331, 431
BsaJI	CCNNGG	5 cut(s)	127, 244, 280, 627, 663
BsaXI	ACNNNNNCTCC	2 cut(s)	302, 332
Bsc4I	CCNNNNNNNGG	2 cut(s)	55, 327
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	2 cut(s)	107, 317
Bse21I	CCTNAGG	1 cut(s)	425
Bse8I	GATNNNNATC	1 cut(s)	24
BseBI	CCWGG	2 cut(s)	510, 629
BseDI	CCNNGG	5 cut(s)	127, 244, 280, 627, 663
BseGI	GGATG	2 cut(s)	123, 624
BseJI	GATNNNNATC	1 cut(s)	24
BseLI	CCNNNNNNNGG	2 cut(s)	55, 327
BseMII	CTCAG	3 cut(s)	150, 187, 416
BseNI	ACTGG	2 cut(s)	107, 317
BseRI	GAGGAG	1 cut(s)	266
BseSI	GKGCMC	1 cut(s)	235
BseX3I	CGGCCG	2 cut(s)	130, 283
BseXI	GCAGC	1 cut(s)	625
BseYI	CCCAGC	1 cut(s)	84
Bsh1236I	CGCG	1 cut(s)	362
Bsh1285I	CGRYCG	3 cut(s)	133, 286, 384
BshFI	GGCC	7 cut(s)	83, 93, 132, 233, 260, 285, 662
BsiEI	CGRYCG	3 cut(s)	133, 286, 384
BsiSI	CCGG	6 cut(s)	120, 129, 229, 282, 404, 437
BslFI	GGGAC	2 cut(s)	91, 485
BslI	CCNNNNNNNGG	2 cut(s)	55, 327
BsmAI	GTCTC	1 cut(s)	584
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	2 cut(s)	91, 485
BsnI	GGCC	7 cut(s)	83, 93, 132, 233, 260, 285, 662
Bsp120I	GGGCCC	1 cut(s)	231
Bsp1286I	GDGCHC	4 cut(s)	50, 235, 444, 705
Bsp143I	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
Bsp1720I	GCTNAGC	1 cut(s)	173
BspACI	CCGC	8 cut(s)	133, 151, 206, 271, 360, 415, 458, 616
BspANI	GGCC	7 cut(s)	83, 93, 132, 233, 260, 285, 662
BspCNI	CTCAG	3 cut(s)	149, 186, 417
BspFNI	CGCG	1 cut(s)	362
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	6 cut(s)	47, 107, 233, 441, 673, 704
BspPI	GGATC	3 cut(s)	33, 558, 707
BspQI	GCTCTTC	1 cut(s)	536
BsrBI	CCGCTC	1 cut(s)	135
BsrFI	RCCGGY	1 cut(s)	119
BsrI	ACTGG	2 cut(s)	107, 317
BssAI	RCCGGY	1 cut(s)	119
BssECI	CCNNGG	5 cut(s)	127, 244, 280, 627, 663
BssMI	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
BssNI	GRCGYC	2 cut(s)	331, 431
Bst2UI	CCWGG	2 cut(s)	510, 629
Bst4CI	ACNGT	2 cut(s)	17, 184
Bst6I	CTCTTC	2 cut(s)	536, 582
BstACI	GRCGYC	2 cut(s)	331, 431
BstAPI	GCANNNNNTGC	1 cut(s)	147
BstC8I	GCNNGC	1 cut(s)	271
BstDEI	CTNAG	3 cut(s)	136, 173, 425
BstDSI	CCRYGG	1 cut(s)	244
BstF5I	GGATG	2 cut(s)	123, 624
BstFNI	CGCG	1 cut(s)	362
BstKTI	GATC	6 cut(s)	12, 28, 393, 553, 609, 715
BstMAI	GTCTC	1 cut(s)	584
BstMBI	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
BstMCI	CGRYCG	3 cut(s)	133, 286, 384
BstMWI	GCNNNNNNNGC	5 cut(s)	73, 129, 138, 147, 266
BstNI	CCWGG	2 cut(s)	510, 629
BstPAI	GACNNNNGTC	1 cut(s)	676
BstSCI	CCNGG	6 cut(s)	127, 228, 280, 403, 508, 627
BstSLI	GKGCMC	1 cut(s)	235
BstUI	CGCG	1 cut(s)	362
BstV1I	GCAGC	1 cut(s)	625
BstXI	CCANNNNNNTGG	1 cut(s)	102
BstZI	CGGCCG	2 cut(s)	130, 283
Bsu36I	CCTNAGG	1 cut(s)	425
BsuRI	GGCC	7 cut(s)	83, 93, 132, 233, 260, 285, 662
BtgI	CCRYGG	1 cut(s)	244
BtgZI	GCGATG	1 cut(s)	250
BtrI	CACGTC	3 cut(s)	463, 594, 678
BtsCI	GGATG	2 cut(s)	123, 624
BtsI	GCAGTG	1 cut(s)	425
BtsIMutI	CAGTG	3 cut(s)	22, 310, 425
Cac8I	GCNNGC	1 cut(s)	271
CaiI	CAGNNNCTG	1 cut(s)	424
CciI	TCATGA	1 cut(s)	553
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	8 cut(s)	82, 92, 105, 231, 232, 258, 660, 671
CseI	GACGC	4 cut(s)	320, 351, 420, 505
Csp6I	GTAC	1 cut(s)	397
CspCI	CAANNNNNGTGG	2 cut(s)	664, 699
CviAII	CATG	3 cut(s)	409, 554, 610
CviQI	GTAC	1 cut(s)	397
DdeI	CTNAG	3 cut(s)	136, 173, 425
DpnI	GATC	6 cut(s)	11, 27, 392, 552, 608, 714
DpnII	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
DraI	TTTAAA	1 cut(s)	454
EaeI	YGGCCR	2 cut(s)	130, 283
EagI	CGGCCG	2 cut(s)	130, 283
Eam1104I	CTCTTC	2 cut(s)	536, 582
EarI	CTCTTC	2 cut(s)	536, 582
EclXI	CGGCCG	2 cut(s)	130, 283
Eco24I	GRGCYC	4 cut(s)	50, 235, 444, 705
Eco47I	GGWCC	2 cut(s)	105, 671
Eco52I	CGGCCG	2 cut(s)	130, 283
Eco57I	CTGAAG	1 cut(s)	674
Eco81I	CCTNAGG	1 cut(s)	425
EcoRII	CCWGG	2 cut(s)	508, 627
EcoT38I	GRGCYC	4 cut(s)	50, 235, 444, 705
Esp3I	CGTCTC	1 cut(s)	584
FaeI	CATG	3 cut(s)	412, 557, 613
FaiI	YATR	3 cut(s)	410, 555, 611
FaqI	GGGAC	2 cut(s)	91, 485
FatI	CATG	3 cut(s)	408, 553, 609
FauI	CCCGC	1 cut(s)	278
FbaI	TGATCA	1 cut(s)	9
Fnu4HI	GCNGC	5 cut(s)	133, 151, 206, 416, 614
FokI	GGATG	2 cut(s)	110, 631
FriOI	GRGCYC	4 cut(s)	50, 235, 444, 705
Fsp4HI	GCNGC	5 cut(s)	133, 151, 206, 416, 614
GluI	GCNGC	5 cut(s)	133, 151, 206, 416, 614
GsaI	CCCAGC	1 cut(s)	88
HaeIII	GGCC	7 cut(s)	83, 93, 132, 233, 260, 285, 662
HapII	CCGG	6 cut(s)	120, 129, 229, 282, 404, 437
HgaI	GACGC	4 cut(s)	320, 351, 420, 505
Hin1I	GRCGYC	2 cut(s)	331, 431
Hin1II	CATG	3 cut(s)	412, 557, 613
HinfI	GANTC	2 cut(s)	59, 371
HpaII	CCGG	6 cut(s)	120, 129, 229, 282, 404, 437
HphI	GGTGA	1 cut(s)	646
Hpy188I	TCNGA	1 cut(s)	370
Hpy188III	TCNNGA	2 cut(s)	304, 554
Hpy99I	CGWCG	6 cut(s)	336, 339, 367, 436, 493, 682
HpyAV	CCTTC	3 cut(s)	28, 164, 511
HpyCH4III	ACNGT	2 cut(s)	17, 184
HpyCH4IV	ACGT	5 cut(s)	462, 488, 593, 645, 677
HpyCH4V	TGCA	2 cut(s)	165, 613
HpyF10VI	GCNNNNNNNGC	5 cut(s)	73, 129, 138, 147, 266
HpyF3I	CTNAG	3 cut(s)	136, 173, 425
HpySE526I	ACGT	5 cut(s)	462, 488, 593, 645, 677
Hsp92I	GRCGYC	2 cut(s)	331, 431
Hsp92II	CATG	3 cut(s)	412, 557, 613
Ksp22I	TGATCA	1 cut(s)	9
Kzo9I	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
LguI	GCTCTTC	1 cut(s)	536
LmnI	GCTCC	3 cut(s)	45, 439, 708
Lsp1109I	GCAGC	1 cut(s)	625
LweI	GCATC	1 cut(s)	132
MaeII	ACGT	5 cut(s)	462, 488, 593, 645, 677
MalI	GATC	6 cut(s)	11, 27, 392, 552, 608, 714
MbiI	CCGCTC	1 cut(s)	135
MboI	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
MboII	GAAGA	2 cut(s)	553, 599
MhlI	GDGCHC	4 cut(s)	50, 235, 444, 705
MluCI	AATT	1 cut(s)	640
MlyI	GAGTC	1 cut(s)	53
MmeI	TCCRAC	1 cut(s)	399
MseI	TTAA	1 cut(s)	453
MspA1I	CMGCKG	1 cut(s)	616
MspI	CCGG	6 cut(s)	120, 129, 229, 282, 404, 437
MspR9I	CCNGG	6 cut(s)	129, 230, 282, 405, 510, 629
MvaI	CCWGG	2 cut(s)	510, 629
MvnI	CGCG	1 cut(s)	362
MwoI	GCNNNNNNNGC	5 cut(s)	73, 129, 138, 147, 266
NciI	CCSGG	4 cut(s)	129, 230, 282, 405
NdeII	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
NlaIII	CATG	3 cut(s)	412, 557, 613
NlaIV	GGNNCC	6 cut(s)	47, 107, 233, 441, 673, 704
NmeAIII	GCCGAG	2 cut(s)	373, 688
PagI	TCATGA	1 cut(s)	553
PciSI	GCTCTTC	1 cut(s)	536
PcsI	WCGNNNNNNNCGW	1 cut(s)	362
PfeI	GAWTC	1 cut(s)	371
PkrI	GCNGC	5 cut(s)	134, 152, 207, 417, 615
PleI	GAGTC	1 cut(s)	53
PpsI	GAGTC	1 cut(s)	53
PshAI	GACNNNNGTC	1 cut(s)	676
Psp6I	CCWGG	2 cut(s)	508, 627
PspFI	CCCAGC	1 cut(s)	84
PspGI	CCWGG	2 cut(s)	508, 627
PspN4I	GGNNCC	6 cut(s)	47, 107, 233, 441, 673, 704
PspOMI	GGGCCC	1 cut(s)	231
PspPI	GGNCC	8 cut(s)	82, 92, 105, 231, 232, 258, 660, 671
PstNI	CAGNNNCTG	1 cut(s)	424
RsaI	GTAC	1 cut(s)	398
RsaNI	GTAC	1 cut(s)	397
SapI	GCTCTTC	1 cut(s)	536
SaqAI	TTAA	1 cut(s)	453
SatI	GCNGC	5 cut(s)	133, 151, 206, 416, 614
Sau3AI	GATC	6 cut(s)	9, 25, 390, 550, 606, 712
Sau96I	GGNCC	8 cut(s)	82, 92, 105, 231, 232, 258, 660, 671
SchI	GAGTC	1 cut(s)	53
ScrFI	CCNGG	6 cut(s)	129, 230, 282, 405, 510, 629
SduI	GDGCHC	4 cut(s)	50, 235, 444, 705
SfaNI	GCATC	1 cut(s)	132
SinI	GGWCC	2 cut(s)	105, 671
Sse9I	AATT	1 cut(s)	640
SsiI	CCGC	8 cut(s)	133, 151, 206, 271, 360, 415, 458, 616
StyD4I	CCNGG	6 cut(s)	127, 228, 280, 403, 508, 627
TaaI	ACNGT	2 cut(s)	17, 184
TaiI	ACGT	5 cut(s)	465, 491, 596, 648, 680
TaqI	TCGA	1 cut(s)	28
TaqII	GACCGA	1 cut(s)	370
TasI	AATT	1 cut(s)	640
TauI	GCSGC	4 cut(s)	135, 153, 208, 418
TfiI	GAWTC	1 cut(s)	371
Tru1I	TTAA	1 cut(s)	453
Tru9I	TTAA	1 cut(s)	453
TscAI	CASTG	3 cut(s)	22, 317, 425
TseI	GCWGC	1 cut(s)	613
TspDTI	ATGAA	1 cut(s)	425
TspGWI	ACGGA	1 cut(s)	705
TspRI	CASTG	3 cut(s)	22, 317, 425
VpaK11BI	GGWCC	2 cut(s)	105, 671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.