Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009856

Physical Location & Seq

Genomic Coordinates Reverse (-)

27556909 .. 27557652

Gene Structure 744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G272200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 447 bp

ATGGCCGATCAGCACTTCCAGCAGCCCCTTCATTTCCAAGGCAGCTATGGCCAGCAGCAACCGCGGTCTTACCAGGTGGCCAAGGCGGCCACTGCAGTCACCGCGGGTGGCTCCCTGCTAGTGCTCTCCGGGTTGGTCCTTGCTGGCACGGTCATTGCTTTGACCATTGCCACTCCGCTGCTCGTCATATTCAGTCCTGTTCTTGTCCCTGCTTTGATCACCGTGGCGCTGATAACGATGGGGTTCTTGACTTCCGGTGGATTCGGTGTGGCGGCCGTCACGGTGTTGTCGTGGATCTACAAGTACGTCACTGGGAAACAGCCACCAGGGGCTGACCAACTGGACCAGGCTCGTCATAAGCTGGCTGGGAAGGCGAGGGATATTAAGGACAGGGCTGAGCAATTTGGCCAACAGCATGTTCCCTCTGGTCAGCAACAGAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005811 GO:0006950 GO:0007275 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009791 GO:0009845 GO:0010154 GO:0010344 GO:0010876 GO:0016020 GO:0019915 GO:0019953 GO:0022414 GO:0032501 GO:0032502 GO:0033036 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050826 GO:0050896 GO:0051179 GO:0051235 GO:0051704 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0090351

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oleosin

Protein Analysis

149

Amino Acids

15.61

Weight (kDa)

9.63

Isoelectric Point (pI)

37.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009856)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25140 AT5G51210
fragaria_vesca	FvH4_7g26900
malus_domestica	MD01G1176900.v1.1 MD04G1057600.v1.1 MD06G1051200.v1.1 MD07G1248300.v1.1
prunus_persica	Prupe.2G272200_v2.0.a1
pyrus_communis	pycom04g05120
rosa_chinensis	RchiOBHm_Chr1g0373571
rosa_laevigata	RLG00000026814
rosa_multiflora	Rmu_sc0002860.1_g000002
rosa_roxburghii	Rroxscaffold_3G00252900 Rroxscaffold_4G00284130
rosa_rugosa	Rorug01G0378400 Rorug07G0085300
rosa_samantha	Rh1AG387800 Rh1BG352100 Rh1CG364800 Rh1DG382500
rosa_wichuraiana	Rw1G034760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	64, 104
AciI	CCGC	7 cut(s)	62, 64, 86, 102, 104, 176, 272
AclWI	GGATC	1 cut(s)	302
AcoI	YGGCCR	6 cut(s)	3, 49, 78, 87, 273, 406
AfaI	GTAC	1 cut(s)	305
AjnI	CCWGG	3 cut(s)	72, 325, 345
AjuI	GAANNNNNNNTTGG	2 cut(s)	402, 434
AluBI	AGCT	2 cut(s)	45, 361
AluI	AGCT	2 cut(s)	45, 361
Alw21I	GWGCWC	1 cut(s)	126
AlwI	GGATC	1 cut(s)	302
AlwNI	CAGNNNCTG	1 cut(s)	332
AoxI	GGCC	6 cut(s)	3, 49, 78, 87, 273, 406
ApeKI	GCWGC	4 cut(s)	22, 42, 55, 178
AspLEI	GCGC	1 cut(s)	229
AspS9I	GGNCC	2 cut(s)	136, 343
AsuC2I	CCSGG	1 cut(s)	130
AsuHPI	GGTGA	2 cut(s)	91, 211
AvaII	GGWCC	2 cut(s)	136, 343
BalI	TGGCCA	3 cut(s)	51, 80, 408
Bbv12I	GWGCWC	1 cut(s)	126
BbvI	GCAGC	4 cut(s)	34, 54, 67, 165
BccI	CCATC	1 cut(s)	232
BceAI	ACGGC	1 cut(s)	260
BciT130I	CCWGG	3 cut(s)	74, 327, 347
BclI	TGATCA	1 cut(s)	216
BcnI	CCSGG	1 cut(s)	130
BfaI	CTAG	1 cut(s)	119
BfmI	CTRYAG	1 cut(s)	93
BfoI	RGCGCY	1 cut(s)	230
BglI	GCCNNNNNGGC	1 cut(s)	86
BisI	GCNGC	6 cut(s)	23, 43, 56, 87, 179, 273
BlpI	GCTNAGC	1 cut(s)	396
BlsI	GCNGC	6 cut(s)	24, 44, 57, 88, 180, 274
Bme1390I	CCNGG	4 cut(s)	74, 130, 327, 347
Bme18I	GGWCC	2 cut(s)	136, 343
BmgT120I	GGNCC	2 cut(s)	136, 343
BmiI	GGNNCC	1 cut(s)	112
BmrFI	CCNGG	4 cut(s)	74, 130, 327, 347
BmrI	ACTGGG	1 cut(s)	321
BmuI	ACTGGG	1 cut(s)	321
Bpu1102I	GCTNAGC	1 cut(s)	396
BpuMI	CCSGG	1 cut(s)	130
BsaJI	CCNNGG	6 cut(s)	37, 62, 81, 102, 222, 326
BsaWI	WCCGGW	1 cut(s)	254
Bse1I	ACTGG	2 cut(s)	316, 345
Bse3DI	GCAATG	2 cut(s)	153, 165
BseBI	CCWGG	3 cut(s)	74, 327, 347
BseDI	CCNNGG	6 cut(s)	37, 62, 81, 102, 222, 326
BseMI	GCAATG	2 cut(s)	153, 165
BseMII	CTCAG	1 cut(s)	387
BseNI	ACTGG	2 cut(s)	316, 345
BseX3I	CGGCCG	1 cut(s)	273
BseXI	GCAGC	4 cut(s)	34, 54, 67, 165
BseYI	CCCAGC	1 cut(s)	365
Bsh1236I	CGCG	2 cut(s)	64, 104
Bsh1285I	CGRYCG	1 cut(s)	276
BshFI	GGCC	6 cut(s)	5, 51, 80, 89, 275, 408
BsiEI	CGRYCG	1 cut(s)	276
BsiHKAI	GWGCWC	1 cut(s)	126
BsiSI	CCGG	2 cut(s)	129, 255
BslFI	GGGAC	1 cut(s)	191
BsmFI	GGGAC	1 cut(s)	191
BsnI	GGCC	6 cut(s)	5, 51, 80, 89, 275, 408
Bsp1286I	GDGCHC	1 cut(s)	126
Bsp143I	GATC	3 cut(s)	7, 216, 294
Bsp1720I	GCTNAGC	1 cut(s)	396
BspACI	CCGC	7 cut(s)	62, 64, 86, 102, 104, 176, 272
BspANI	GGCC	6 cut(s)	5, 51, 80, 89, 275, 408
BspCNI	CTCAG	1 cut(s)	388
BspFNI	CGCG	2 cut(s)	64, 104
BspLI	GGNNCC	1 cut(s)	112
BspMAI	CTGCAG	1 cut(s)	97
BspPI	GGATC	1 cut(s)	302
BsrDI	GCAATG	2 cut(s)	153, 165
BsrI	ACTGG	2 cut(s)	316, 345
BssECI	CCNNGG	6 cut(s)	37, 62, 81, 102, 222, 326
BssMI	GATC	3 cut(s)	7, 216, 294
BssT1I	CCWWGG	2 cut(s)	37, 81
Bst2UI	CCWGG	3 cut(s)	74, 327, 347
Bst4CI	ACNGT	3 cut(s)	151, 223, 283
BstC8I	GCNNGC	3 cut(s)	53, 145, 363
BstDEI	CTNAG	1 cut(s)	396
BstDSI	CCRYGG	3 cut(s)	62, 102, 222
BstFNI	CGCG	2 cut(s)	64, 104
BstH2I	RGCGCY	1 cut(s)	230
BstHHI	GCGC	1 cut(s)	229
BstKTI	GATC	3 cut(s)	10, 219, 297
BstMBI	GATC	3 cut(s)	7, 216, 294
BstMCI	CGRYCG	1 cut(s)	276
BstMWI	GCNNNNNNNGC	7 cut(s)	19, 48, 61, 86, 92, 101, 371
BstNI	CCWGG	3 cut(s)	74, 327, 347
BstNSI	RCATGY	1 cut(s)	419
BstSCI	CCNGG	4 cut(s)	72, 128, 325, 345
BstSFI	CTRYAG	1 cut(s)	93
BstUI	CGCG	2 cut(s)	64, 104
BstV1I	GCAGC	4 cut(s)	34, 54, 67, 165
BstX2I	RGATCY	1 cut(s)	294
BstYI	RGATCY	1 cut(s)	294
BstZI	CGGCCG	1 cut(s)	273
BsuRI	GGCC	6 cut(s)	5, 51, 80, 89, 275, 408
BtgI	CCRYGG	3 cut(s)	62, 102, 222
BtsI	GCAGTG	1 cut(s)	90
BtsIMutI	CAGTG	2 cut(s)	90, 309
Cac8I	GCNNGC	3 cut(s)	53, 145, 363
CaiI	CAGNNNCTG	1 cut(s)	332
CfoI	GCGC	1 cut(s)	229
Cfr13I	GGNCC	2 cut(s)	136, 343
Cfr42I	CCGCGG	2 cut(s)	65, 105
CsiI	ACCWGGT	1 cut(s)	72
Csp6I	GTAC	1 cut(s)	304
CviAII	CATG	1 cut(s)	416
CviQI	GTAC	1 cut(s)	304
DdeI	CTNAG	1 cut(s)	396
DpnI	GATC	3 cut(s)	9, 218, 296
DpnII	GATC	3 cut(s)	7, 216, 294
EaeI	YGGCCR	6 cut(s)	3, 49, 78, 87, 273, 406
EagI	CGGCCG	1 cut(s)	273
EclXI	CGGCCG	1 cut(s)	273
Eco130I	CCWWGG	2 cut(s)	37, 81
Eco47I	GGWCC	2 cut(s)	136, 343
Eco52I	CGGCCG	1 cut(s)	273
EcoRII	CCWGG	3 cut(s)	72, 325, 345
EcoT14I	CCWWGG	2 cut(s)	37, 81
ErhI	CCWWGG	2 cut(s)	37, 81
FaeI	CATG	1 cut(s)	419
FaiI	YATR	4 cut(s)	48, 188, 357, 417
FaqI	GGGAC	1 cut(s)	191
FatI	CATG	1 cut(s)	415
FauI	CCCGC	1 cut(s)	97
FbaI	TGATCA	1 cut(s)	216
Fnu4HI	GCNGC	6 cut(s)	23, 43, 56, 87, 179, 273
Fsp4HI	GCNGC	6 cut(s)	23, 43, 56, 87, 179, 273
FspBI	CTAG	1 cut(s)	119
GlaI	GCGC	1 cut(s)	228
GluI	GCNGC	6 cut(s)	23, 43, 56, 87, 179, 273
GsaI	CCCAGC	1 cut(s)	369
HaeII	RGCGCY	1 cut(s)	230
HaeIII	GGCC	6 cut(s)	5, 51, 80, 89, 275, 408
HapII	CCGG	2 cut(s)	129, 255
HhaI	GCGC	1 cut(s)	229
Hin1II	CATG	1 cut(s)	419
Hin6I	GCGC	1 cut(s)	227
HinP1I	GCGC	1 cut(s)	227
HinfI	GANTC	1 cut(s)	261
HpaII	CCGG	2 cut(s)	129, 255
HphI	GGTGA	2 cut(s)	91, 211
Hpy188III	TCNNGA	1 cut(s)	247
HpyAV	CCTTC	2 cut(s)	38, 364
HpyCH4III	ACNGT	3 cut(s)	151, 223, 283
HpyCH4IV	ACGT	1 cut(s)	306
HpyCH4V	TGCA	1 cut(s)	95
HpyF10VI	GCNNNNNNNGC	7 cut(s)	19, 48, 61, 86, 92, 101, 371
HpyF3I	CTNAG	1 cut(s)	396
HpySE526I	ACGT	1 cut(s)	306
Hsp92II	CATG	1 cut(s)	419
HspAI	GCGC	1 cut(s)	227
Ksp22I	TGATCA	1 cut(s)	216
KspI	CCGCGG	2 cut(s)	65, 105
Kzo9I	GATC	3 cut(s)	7, 216, 294
LmnI	GCTCC	1 cut(s)	116
Lsp1109I	GCAGC	4 cut(s)	34, 54, 67, 165
MabI	ACCWGGT	1 cut(s)	72
MaeI	CTAG	1 cut(s)	119
MaeII	ACGT	1 cut(s)	306
MaeIII	GTNAC	3 cut(s)	97, 277, 307
MalI	GATC	3 cut(s)	9, 218, 296
MboI	GATC	3 cut(s)	7, 216, 294
MflI	RGATCY	1 cut(s)	294
MhlI	GDGCHC	1 cut(s)	126
MlsI	TGGCCA	3 cut(s)	51, 80, 408
MluCI	AATT	1 cut(s)	401
MluNI	TGGCCA	3 cut(s)	51, 80, 408
MnlI	CCTC	2 cut(s)	369, 433
Mox20I	TGGCCA	3 cut(s)	51, 80, 408
MscI	TGGCCA	3 cut(s)	51, 80, 408
MseI	TTAA	2 cut(s)	384, 445
Msp20I	TGGCCA	3 cut(s)	51, 80, 408
MspA1I	CMGCKG	3 cut(s)	64, 104, 178
MspI	CCGG	2 cut(s)	129, 255
MspR9I	CCNGG	4 cut(s)	74, 130, 327, 347
MvaI	CCWGG	3 cut(s)	74, 327, 347
MvnI	CGCG	2 cut(s)	64, 104
MwoI	GCNNNNNNNGC	7 cut(s)	19, 48, 61, 86, 92, 101, 371
NciI	CCSGG	1 cut(s)	130
NdeII	GATC	3 cut(s)	7, 216, 294
NlaIII	CATG	1 cut(s)	419
NlaIV	GGNNCC	1 cut(s)	112
NmuCI	GTSAC	3 cut(s)	97, 277, 307
NspI	RCATGY	1 cut(s)	419
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PfeI	GAWTC	1 cut(s)	261
PkrI	GCNGC	6 cut(s)	24, 44, 57, 88, 180, 274
Psp6I	CCWGG	3 cut(s)	72, 325, 345
PspFI	CCCAGC	1 cut(s)	365
PspGI	CCWGG	3 cut(s)	72, 325, 345
PspN4I	GGNNCC	1 cut(s)	112
PspPI	GGNCC	2 cut(s)	136, 343
PstI	CTGCAG	1 cut(s)	97
PstNI	CAGNNNCTG	1 cut(s)	332
PsuI	RGATCY	1 cut(s)	294
RsaI	GTAC	1 cut(s)	305
RsaNI	GTAC	1 cut(s)	304
SacII	CCGCGG	2 cut(s)	65, 105
SaqAI	TTAA	2 cut(s)	384, 445
SatI	GCNGC	6 cut(s)	23, 43, 56, 87, 179, 273
Sau3AI	GATC	3 cut(s)	7, 216, 294
Sau96I	GGNCC	2 cut(s)	136, 343
ScrFI	CCNGG	4 cut(s)	74, 130, 327, 347
SduI	GDGCHC	1 cut(s)	126
SetI	ASST	4 cut(s)	47, 78, 309, 363
SexAI	ACCWGGT	1 cut(s)	72
SfcI	CTRYAG	1 cut(s)	93
SfiI	GGCCNNNNNGGCC	1 cut(s)	86
Sfr303I	CCGCGG	2 cut(s)	65, 105
SgrBI	CCGCGG	2 cut(s)	65, 105
SinI	GGWCC	2 cut(s)	136, 343
Sse9I	AATT	1 cut(s)	401
SsiI	CCGC	7 cut(s)	62, 64, 86, 102, 104, 176, 272
SspMI	CTAG	1 cut(s)	119
StyD4I	CCNGG	4 cut(s)	72, 128, 325, 345
StyI	CCWWGG	2 cut(s)	37, 81
TaaI	ACNGT	3 cut(s)	151, 223, 283
TaiI	ACGT	1 cut(s)	309
TasI	AATT	1 cut(s)	401
TauI	GCSGC	2 cut(s)	89, 275
TfiI	GAWTC	1 cut(s)	261
Tru1I	TTAA	2 cut(s)	384, 445
Tru9I	TTAA	2 cut(s)	384, 445
TscAI	CASTG	2 cut(s)	97, 316
TseFI	GTSAC	3 cut(s)	97, 277, 307
TseI	GCWGC	4 cut(s)	22, 42, 55, 178
Tsp45I	GTSAC	3 cut(s)	97, 277, 307
TspDTI	ATGAA	1 cut(s)	20
TspRI	CASTG	2 cut(s)	97, 316
VpaK11BI	GGWCC	2 cut(s)	136, 343
XceI	RCATGY	1 cut(s)	419
XcmI	CCANNNNNNNNNTGG	1 cut(s)	44
XspI	CTAG	1 cut(s)	119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.