Prupe.2G273200_v2.0.a1

acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0010270
Physical Location & Seq
Forward (+)
27615712 .. 27619151
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G273200.1

Sequence Viewer

Length: 801 bp
ATGACTTTCTTGAAGATTTTCCTTTTTTTTCCTTTACTTTCCCTCGCGTTTTCTCAGGAAACTTTCACTTCCCACCTCCTGCCAAGGCCTTTGATCATCGAATACCCCGAAAACACGGAGACAAATTTCAGAGAATTAGAGGAAGAGTTTAAATTGCACTGTACCAGCTGGAGATTTTCTGTGGAGGCTAACAACATCAACCCCTGGAAAACAATCCCACAGGAATGTGCAAAGTATGTGAAAGATTACGTGACTGGTCGGGCTTATGGGTTTGATCTCGAAAGGGTGTCTAAGGAGGCTGGAGTTTATGCCAAGGCTGTTGAATTGAGTGGTGATGGGAAAGATGTGTGGATTTTTGACATTGATGACACTCTGCTTTCCAATCTTCCGTATTATGCTGACCATGGTTATGGCTTGGAGGTTTTTGATCATCTGGAGTTTGATAGATGGGTTGACAAGGCCATGGCACCCGCTATAAAGTCCAGCTTGAAACTCTATGAAGAGGTCTTGGGTTTGGGAATTAAGGTATTTTTGCTCACTGGGCGCAGTGACGGGAAAAGAAAGGCTACTATTGAGAATCTGATCAATGCAGGATTTCGAGATTGGCATAAGCTTATTTTAAGGGCCCCGGATGAGCAAGGGAAATTAGCAACAGTTTACAAGTCAGAAAAGAGGAATGAGATGGAGAAAGAGGGATACAGAATTCTTGGCAACTCTGGAGACCAGTGGAGTGACATATTAGGCACCTCAATGTCCATCCGCTCATTCAAGCTTCCGAATCCAATGTATTATATTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acid_phosphat_B

Protein Analysis

267

Amino Acids

30.72

Weight (kDa)

5.52

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010270)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25150 AT5G51260 AT5G51260
fragaria_vesca FvH4_7g27010 FvH4_7g27010 FvH4_7g27010
malus_domestica MD01G1177700.v1.1 MD07G1249500.v1.1
prunus_persica Prupe.2G273200_v2.0.a1
pyrus_communis pycom01g18850 pycom07g22280
rosa_chinensis RchiOBHm_Chr1g0373811
rosa_laevigata RLG00000026804
rosa_multiflora Rmu_ssc0000294.1_g000001
rosa_roxburghii Rroxscaffold_4G00283990
rosa_rugosa Rorug01G0379500
rosa_samantha Rh1AG388900 Rh1BG353100 Rh1CG366300 Rh1DG384000
rosa_wichuraiana Rw1G034630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 466, 743
AccBSI CCGCTC 1 cut(s) 762
AccII CGCG 1 cut(s) 47
AciI CCGC 2 cut(s) 471, 760
AcsI RAATTY 2 cut(s) 124, 702
AfaI GTAC 1 cut(s) 163
AgsI TTSAA 4 cut(s) 13, 323, 490, 769
AjnI CCWGG 1 cut(s) 203
AluBI AGCT 4 cut(s) 168, 486, 613, 772
AluI AGCT 4 cut(s) 168, 486, 613, 772
Alw26I GTCTC 2 cut(s) 113, 714
AoxI GGCC 3 cut(s) 86, 459, 624
ApaI GGGCCC 1 cut(s) 628
ApoI RAATTY 2 cut(s) 124, 702
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 1 cut(s) 546
AspS9I GGNCC 2 cut(s) 624, 625
AsuC2I CCSGG 1 cut(s) 629
AsuHPI GGTGA 1 cut(s) 344
BaeGI GKGCMC 1 cut(s) 628
BanI GGYRCC 2 cut(s) 466, 743
BanII GRGCYC 1 cut(s) 628
BccI CCATC 4 cut(s) 329, 441, 676, 764
BciT130I CCWGG 1 cut(s) 205
BciVI GTATCC 1 cut(s) 689
BclI TGATCA 3 cut(s) 93, 427, 582
BcnI CCSGG 1 cut(s) 629
BcoDI GTCTC 2 cut(s) 113, 714
BfuI GTATCC 1 cut(s) 689
Bme1390I CCNGG 2 cut(s) 205, 629
BmgT120I GGNCC 2 cut(s) 624, 625
BmiI GGNNCC 4 cut(s) 468, 626, 627, 745
BmrFI CCNGG 2 cut(s) 205, 629
BmrI ACTGGG 1 cut(s) 549
BmuI ACTGGG 1 cut(s) 549
BpmI CTGGAG 4 cut(s) 190, 321, 455, 738
BpuMI CCSGG 1 cut(s) 629
BsaAI YACGTR 1 cut(s) 250
BsaI GGTCTC 1 cut(s) 714
BsaJI CCNNGG 6 cut(s) 83, 203, 312, 403, 462, 627
Bse1I ACTGG 3 cut(s) 259, 544, 724
BseBI CCWGG 1 cut(s) 205
BseDI CCNNGG 6 cut(s) 83, 203, 312, 403, 462, 627
BseGI GGATG 2 cut(s) 637, 756
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 3 cut(s) 259, 544, 724
BseSI GKGCMC 1 cut(s) 628
Bsh1236I CGCG 1 cut(s) 47
BshFI GGCC 3 cut(s) 88, 461, 626
BshNI GGYRCC 2 cut(s) 466, 743
BsiSI CCGG 1 cut(s) 629
BsmAI GTCTC 2 cut(s) 113, 714
BsnI GGCC 3 cut(s) 88, 461, 626
Bso31I GGTCTC 1 cut(s) 714
Bsp120I GGGCCC 1 cut(s) 624
Bsp1286I GDGCHC 1 cut(s) 628
Bsp143I GATC 4 cut(s) 93, 274, 427, 582
Bsp19I CCATGG 2 cut(s) 403, 462
BspACI CCGC 2 cut(s) 471, 760
BspANI GGCC 3 cut(s) 88, 461, 626
BspCNI CTCAG 1 cut(s) 67
BspFNI CGCG 1 cut(s) 47
BspLI GGNNCC 4 cut(s) 468, 626, 627, 745
BspT107I GGYRCC 2 cut(s) 466, 743
BspTNI GGTCTC 1 cut(s) 714
BsrBI CCGCTC 1 cut(s) 762
BsrI ACTGG 3 cut(s) 259, 544, 724
BssECI CCNNGG 6 cut(s) 83, 203, 312, 403, 462, 627
BssMI GATC 4 cut(s) 93, 274, 427, 582
BssT1I CCWWGG 4 cut(s) 83, 312, 403, 462
Bst2UI CCWGG 1 cut(s) 205
Bst4CI ACNGT 2 cut(s) 161, 655
Bst6I CTCTTC 2 cut(s) 138, 495
BstBAI YACGTR 1 cut(s) 250
BstDEI CTNAG 2 cut(s) 54, 291
BstDSI CCRYGG 2 cut(s) 403, 462
BstF5I GGATG 2 cut(s) 637, 756
BstFNI CGCG 1 cut(s) 47
BstHHI GCGC 1 cut(s) 546
BstKTI GATC 4 cut(s) 96, 277, 430, 585
BstMAI GTCTC 2 cut(s) 113, 714
BstMBI GATC 4 cut(s) 93, 274, 427, 582
BstMWI GCNNNNNNNGC 1 cut(s) 541
BstNI CCWGG 1 cut(s) 205
BstSCI CCNGG 2 cut(s) 203, 627
BstSLI GKGCMC 1 cut(s) 628
BstUI CGCG 1 cut(s) 47
BstXI CCANNNNNNTGG 1 cut(s) 410
BsuI GTATCC 1 cut(s) 689
BsuRI GGCC 3 cut(s) 88, 461, 626
BtgI CCRYGG 2 cut(s) 403, 462
BtsCI GGATG 2 cut(s) 637, 756
BtsI GCAGTG 1 cut(s) 553
BtsIMutI CAGTG 4 cut(s) 157, 537, 553, 731
CfoI GCGC 1 cut(s) 546
Cfr13I GGNCC 2 cut(s) 624, 625
Csp6I GTAC 1 cut(s) 162
CviAII CATG 3 cut(s) 404, 463, 798
CviQI GTAC 1 cut(s) 162
DdeI CTNAG 2 cut(s) 54, 291
DpnI GATC 4 cut(s) 95, 276, 429, 584
DpnII GATC 4 cut(s) 93, 274, 427, 582
DraI TTTAAA 1 cut(s) 151
Eam1104I CTCTTC 2 cut(s) 138, 495
EarI CTCTTC 2 cut(s) 138, 495
Eco130I CCWWGG 4 cut(s) 83, 312, 403, 462
Eco147I AGGCCT 1 cut(s) 88
Eco24I GRGCYC 1 cut(s) 628
Eco31I GGTCTC 1 cut(s) 714
EcoO109I RGGNCCY 2 cut(s) 624, 625
EcoRI GAATTC 1 cut(s) 702
EcoRII CCWGG 1 cut(s) 203
EcoT14I CCWWGG 4 cut(s) 83, 312, 403, 462
EcoT38I GRGCYC 1 cut(s) 628
ErhI CCWWGG 4 cut(s) 83, 312, 403, 462
FaeI CATG 3 cut(s) 407, 466, 801
FalI AAGNNNNNCTT 2 cut(s) 470, 502
FatI CATG 3 cut(s) 403, 462, 797
FauI CCCGC 1 cut(s) 478
FbaI TGATCA 3 cut(s) 93, 427, 582
FokI GGATG 2 cut(s) 644, 743
FriOI GRGCYC 1 cut(s) 628
GlaI GCGC 1 cut(s) 545
GsuI CTGGAG 4 cut(s) 190, 321, 455, 738
HaeIII GGCC 3 cut(s) 88, 461, 626
HapII CCGG 1 cut(s) 629
HhaI GCGC 1 cut(s) 546
Hin1II CATG 3 cut(s) 407, 466, 801
Hin6I GCGC 1 cut(s) 544
HinP1I GCGC 1 cut(s) 544
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 2 cut(s) 611, 770
HinfI GANTC 2 cut(s) 577, 778
HpaII CCGG 1 cut(s) 629
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 454, 658
Hpy188I TCNGA 4 cut(s) 131, 582, 667, 777
Hpy188III TCNNGA 6 cut(s) 10, 56, 278, 434, 599, 717
Hpy8I GTNNAC 2 cut(s) 454, 658
HpyCH4III ACNGT 2 cut(s) 161, 655
HpyCH4IV ACGT 1 cut(s) 249
HpyCH4V TGCA 3 cut(s) 157, 230, 590
HpyF10VI GCNNNNNNNGC 1 cut(s) 541
HpyF3I CTNAG 2 cut(s) 54, 291
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 3 cut(s) 407, 466, 801
HspAI GCGC 1 cut(s) 544
Ksp22I TGATCA 3 cut(s) 93, 427, 582
Kzo9I GATC 4 cut(s) 93, 274, 427, 582
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 3 cut(s) 250, 548, 731
MalI GATC 4 cut(s) 95, 276, 429, 584
MbiI CCGCTC 1 cut(s) 762
MboI GATC 4 cut(s) 93, 274, 427, 582
MboII GAAGA 4 cut(s) 25, 155, 377, 512
MhlI GDGCHC 1 cut(s) 628
MluCI AATT 7 cut(s) 124, 134, 152, 323, 519, 644, 702
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 3 cut(s) 150, 522, 620
MslI CAYNNNNRTG 3 cut(s) 223, 408, 749
MspA1I CMGCKG 1 cut(s) 168
MspI CCGG 1 cut(s) 629
MspR9I CCNGG 2 cut(s) 205, 629
MvaI CCWGG 1 cut(s) 205
MvnI CGCG 1 cut(s) 47
MwoI GCNNNNNNNGC 1 cut(s) 541
NciI CCSGG 1 cut(s) 629
NcoI CCATGG 2 cut(s) 403, 462
NdeII GATC 4 cut(s) 93, 274, 427, 582
NlaIII CATG 3 cut(s) 407, 466, 801
NlaIV GGNNCC 4 cut(s) 468, 626, 627, 745
NmuCI GTSAC 3 cut(s) 250, 548, 731
PceI AGGCCT 1 cut(s) 88
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 2 cut(s) 577, 778
Ppu21I YACGTR 1 cut(s) 250
Psp6I CCWGG 1 cut(s) 203
PspGI CCWGG 1 cut(s) 203
PspN4I GGNNCC 4 cut(s) 468, 626, 627, 745
PspOMI GGGCCC 1 cut(s) 624
PspPI GGNCC 2 cut(s) 624, 625
PvuII CAGCTG 1 cut(s) 168
RsaI GTAC 1 cut(s) 163
RsaNI GTAC 1 cut(s) 162
RseI CAYNNNNRTG 3 cut(s) 223, 408, 749
SaqAI TTAA 3 cut(s) 150, 522, 620
Sau3AI GATC 4 cut(s) 93, 274, 427, 582
Sau96I GGNCC 2 cut(s) 624, 625
ScrFI CCNGG 2 cut(s) 205, 629
SduI GDGCHC 1 cut(s) 628
SmiMI CAYNNNNRTG 3 cut(s) 223, 408, 749
Sse9I AATT 7 cut(s) 124, 134, 152, 323, 519, 644, 702
SseBI AGGCCT 1 cut(s) 88
SsiI CCGC 2 cut(s) 471, 760
StuI AGGCCT 1 cut(s) 88
StyD4I CCNGG 2 cut(s) 203, 627
StyI CCWWGG 4 cut(s) 83, 312, 403, 462
TaaI ACNGT 2 cut(s) 161, 655
TaiI ACGT 1 cut(s) 252
TaqI TCGA 3 cut(s) 99, 279, 598
TasI AATT 7 cut(s) 124, 134, 152, 323, 519, 644, 702
TfiI GAWTC 2 cut(s) 577, 778
Tru1I TTAA 3 cut(s) 150, 522, 620
Tru9I TTAA 3 cut(s) 150, 522, 620
TscAI CASTG 4 cut(s) 164, 544, 553, 731
TseFI GTSAC 3 cut(s) 250, 548, 731
Tsp45I GTSAC 3 cut(s) 250, 548, 731
TspDTI ATGAA 1 cut(s) 513
TspGWI ACGGA 2 cut(s) 131, 378
TspRI CASTG 4 cut(s) 164, 544, 553, 731
XapI RAATTY 2 cut(s) 124, 702
XmnI GAANNNNTTC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.