Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007447

Physical Location & Seq

Genomic Coordinates Reverse (-)

29892852 .. 29895817

Gene Structure 2966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G321700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGCAGGAAAGAGTTCTTGATTACATTTTGGTACCGGCAGGCCTCCTAGTTATGGTGGCATACCACCTTTGGCTTCTCTATCGAATTATAATGCAACCAAATAATACCATCATCGGCATCAATTCCATCAACCGCCGCTTCTGGGTCTACGCTATGATGGAGGATGCGCCAAAGAATGGTGTTCTTGCGGTGCAGACACTGCGAAACAACATAATGGCATCGACCCTTTTGGCCTCGACGGCCATTATGCTCAGTTCTCTCATTGCCGTGTTGATGACAGGTGGCAGCAAGGATCGAAAGGCGTTTTTCGTCTTCGGAAACAGAAGCGAGCTCGCGTTTTCCATCAAGTTCTTTGCCATATTGGTCTGTTTCTTGGTGGCTTTCCTGTTCAATGTGCAGTCCATAAGATACTACAGCCACGCGAGCATTCTCATCAACGCCCCCTTCAAAAAGATGTCACCGCATCACAAGCATCATTATCTCACAGCAGAGTATGTCGCCAACACTGTCAACAGAGGCAGCTATTTCTGGTCCTTGGGCCTCCGTGCCTTCTACTTCTCTTTCCCTCTGTTTCTGTGGATCTTTGGGCCCATTCCCATGTTCGTGTCCTGCTTTGTTTTGGTCATCATGCTCTATTTCCTGGATGTCACCTTTCAGTTTGGATGGGTTGTTGGGGTTGCCGATGAGGAGGAGCACAACAGCCTTAACAAGGATGAGGAACAAGGCATTTCATTACCACATCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF599

Protein Analysis

249

Amino Acids

28.49

Weight (kDa)

9.06

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24600 AT5G24600
fragaria_vesca	FvH4_7g33270 FvH4_7g33281
malus_domestica	MD07G1302500.v1.1 MD07G1302800.v1.1 MD07G1303000.v1.1 MD13G1115900.v1.1
prunus_persica	Prupe.2G321700_v2.0.a1
pyrus_communis	pycom07g27590 pycom07g27600
rosa_chinensis	RchiOBHm_Chr1g0334581 RchiOBHm_Chr1g0383261
rosa_laevigata	RLG00000026118
rosa_multiflora	Rmu_co8446583.1_g000001 Rmu_sc0007173.1_g000023 Rmu_sc0014196.1_g000007
rosa_roxburghii	Rroxscaffold_4G00277460
rosa_rugosa	Rorug01G0439900
rosa_samantha	Rh1AG465600 Rh1BG423000 Rh1CG436200 Rh1DG153900 Rh1DG455700
rosa_wichuraiana	Rw1G040680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	89
Acc65I	GGTACC	1 cut(s)	31
AccB1I	GGYRCC	1 cut(s)	31
AccB7I	CCANNNNNTGG	1 cut(s)	176
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	2 cut(s)	335, 422
AciI	CCGC	4 cut(s)	133, 136, 188, 461
AclWI	GGATC	2 cut(s)	300, 587
AcoI	YGGCCR	1 cut(s)	240
AfaI	GTAC	1 cut(s)	33
AfiI	CCNNNNNNNGG	4 cut(s)	52, 142, 176, 709
AgsI	TTSAA	2 cut(s)	391, 448
AjnI	CCWGG	1 cut(s)	639
AluBI	AGCT	2 cut(s)	331, 522
AluI	AGCT	2 cut(s)	331, 522
Alw21I	GWGCWC	2 cut(s)	333, 696
AlwI	GGATC	2 cut(s)	300, 587
AlwNI	CAGNNNCTG	1 cut(s)	199
AoxI	GGCC	5 cut(s)	40, 231, 240, 538, 587
ApaI	GGGCCC	1 cut(s)	591
ApeKI	GCWGC	2 cut(s)	285, 519
Asp700I	GAANNNNTTC	1 cut(s)	12
Asp718I	GGTACC	1 cut(s)	31
AspLEI	GCGC	1 cut(s)	169
AspS9I	GGNCC	4 cut(s)	531, 538, 587, 588
AsuHPI	GGTGA	2 cut(s)	450, 640
AvaII	GGWCC	1 cut(s)	531
BaeGI	GKGCMC	1 cut(s)	591
BanI	GGYRCC	1 cut(s)	31
BanII	GRGCYC	2 cut(s)	333, 591
BbsI	GAAGAC	1 cut(s)	304
Bbv12I	GWGCWC	2 cut(s)	333, 696
BbvI	GCAGC	2 cut(s)	297, 531
BccI	CCATC	5 cut(s)	116, 134, 151, 350, 657
BceAI	ACGGC	2 cut(s)	251, 255
BciT130I	CCWGG	1 cut(s)	641
BfaI	CTAG	1 cut(s)	47
BfmI	CTRYAG	1 cut(s)	412
BglI	GCCNNNNNGGC	1 cut(s)	239
BisI	GCNGC	3 cut(s)	136, 286, 520
BlsI	GCNGC	3 cut(s)	137, 287, 521
Bme1390I	CCNGG	1 cut(s)	641
Bme18I	GGWCC	1 cut(s)	531
BmgT120I	GGNCC	4 cut(s)	531, 538, 587, 588
BmiI	GGNNCC	2 cut(s)	33, 589
BmrFI	CCNGG	1 cut(s)	641
BmsI	GCATC	5 cut(s)	126, 154, 227, 472, 481
BpiI	GAAGAC	1 cut(s)	304
BsaJI	CCNNGG	1 cut(s)	534
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 142, 176, 709
Bse118I	RCCGGY	1 cut(s)	34
Bse3DI	GCAATG	1 cut(s)	261
BseBI	CCWGG	1 cut(s)	641
BseDI	CCNNGG	1 cut(s)	534
BseGI	GGATG	4 cut(s)	169, 649, 668, 718
BseLI	CCNNNNNNNGG	4 cut(s)	52, 142, 176, 709
BseMI	GCAATG	1 cut(s)	261
BseMII	CTCAG	1 cut(s)	265
BseRI	GAGGAG	2 cut(s)	701, 704
BseSI	GKGCMC	1 cut(s)	591
BseXI	GCAGC	2 cut(s)	297, 531
BsgI	GTGCAG	2 cut(s)	212, 416
Bsh1236I	CGCG	2 cut(s)	335, 422
BshFI	GGCC	5 cut(s)	42, 233, 242, 540, 589
BshNI	GGYRCC	1 cut(s)	31
BsiHKAI	GWGCWC	2 cut(s)	333, 696
BsiSI	CCGG	1 cut(s)	35
BslI	CCNNNNNNNGG	4 cut(s)	52, 142, 176, 709
BsmI	GAATGC	1 cut(s)	426
BsnI	GGCC	5 cut(s)	42, 233, 242, 540, 589
Bsp120I	GGGCCC	1 cut(s)	587
Bsp1286I	GDGCHC	3 cut(s)	333, 591, 696
Bsp143I	GATC	2 cut(s)	292, 579
BspACI	CCGC	4 cut(s)	133, 136, 188, 461
BspANI	GGCC	5 cut(s)	42, 233, 242, 540, 589
BspCNI	CTCAG	1 cut(s)	264
BspFNI	CGCG	2 cut(s)	335, 422
BspLI	GGNNCC	2 cut(s)	33, 589
BspPI	GGATC	2 cut(s)	300, 587
BspT107I	GGYRCC	1 cut(s)	31
BsrDI	GCAATG	1 cut(s)	261
BsrFI	RCCGGY	1 cut(s)	34
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	1 cut(s)	534
BssMI	GATC	2 cut(s)	292, 579
BssT1I	CCWWGG	1 cut(s)	534
Bst2UI	CCWGG	1 cut(s)	641
Bst4CI	ACNGT	1 cut(s)	508
BstAPI	GCANNNNNTGC	1 cut(s)	199
BstC8I	GCNNGC	4 cut(s)	40, 329, 333, 424
BstDEI	CTNAG	1 cut(s)	251
BstENI	CCTNNNNNAGG	1 cut(s)	707
BstF5I	GGATG	4 cut(s)	169, 649, 668, 718
BstFNI	CGCG	2 cut(s)	335, 422
BstHHI	GCGC	1 cut(s)	169
BstKTI	GATC	2 cut(s)	295, 582
BstMBI	GATC	2 cut(s)	292, 579
BstMWI	GCNNNNNNNGC	4 cut(s)	199, 239, 423, 469
BstNI	CCWGG	1 cut(s)	641
BstSCI	CCNGG	1 cut(s)	639
BstSFI	CTRYAG	1 cut(s)	412
BstSLI	GKGCMC	1 cut(s)	591
BstUI	CGCG	2 cut(s)	335, 422
BstV1I	GCAGC	2 cut(s)	297, 531
BstV2I	GAAGAC	1 cut(s)	304
BstX2I	RGATCY	1 cut(s)	579
BstYI	RGATCY	1 cut(s)	579
BsuRI	GGCC	5 cut(s)	42, 233, 242, 540, 589
BtsCI	GGATG	4 cut(s)	169, 649, 668, 718
BtsI	GCAGTG	1 cut(s)	197
BtsIMutI	CAGTG	2 cut(s)	197, 504
Cac8I	GCNNGC	4 cut(s)	40, 329, 333, 424
CaiI	CAGNNNCTG	1 cut(s)	199
CfoI	GCGC	1 cut(s)	169
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	4 cut(s)	531, 538, 587, 588
Csp6I	GTAC	1 cut(s)	32
CviAII	CATG	2 cut(s)	598, 628
CviQI	GTAC	1 cut(s)	32
DdeI	CTNAG	1 cut(s)	251
DpnI	GATC	2 cut(s)	294, 581
DpnII	GATC	2 cut(s)	292, 579
EaeI	YGGCCR	1 cut(s)	240
Ecl136II	GAGCTC	1 cut(s)	331
Eco130I	CCWWGG	1 cut(s)	534
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	333, 591
Eco47I	GGWCC	1 cut(s)	531
Eco53kI	GAGCTC	1 cut(s)	331
EcoICRI	GAGCTC	1 cut(s)	331
EcoNI	CCTNNNNNAGG	1 cut(s)	707
EcoRII	CCWGG	1 cut(s)	639
EcoT14I	CCWWGG	1 cut(s)	534
EcoT38I	GRGCYC	2 cut(s)	333, 591
ErhI	CCWWGG	1 cut(s)	534
FaeI	CATG	2 cut(s)	601, 631
FatI	CATG	2 cut(s)	597, 627
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	3 cut(s)	136, 286, 520
FokI	GGATG	4 cut(s)	176, 656, 675, 725
FriOI	GRGCYC	2 cut(s)	333, 591
Fsp4HI	GCNGC	3 cut(s)	136, 286, 520
FspBI	CTAG	1 cut(s)	47
GlaI	GCGC	1 cut(s)	168
GluI	GCNGC	3 cut(s)	136, 286, 520
HaeIII	GGCC	5 cut(s)	42, 233, 242, 540, 589
HapII	CCGG	1 cut(s)	35
HhaI	GCGC	1 cut(s)	169
Hin1II	CATG	2 cut(s)	601, 631
Hin6I	GCGC	1 cut(s)	167
HinP1I	GCGC	1 cut(s)	167
HincII	GTYRAC	1 cut(s)	511
HindII	GTYRAC	1 cut(s)	511
HpaII	CCGG	1 cut(s)	35
HphI	GGTGA	2 cut(s)	450, 640
Hpy166II	GTNNAC	2 cut(s)	148, 511
Hpy188I	TCNGA	1 cut(s)	317
Hpy188III	TCNNGA	1 cut(s)	17
Hpy8I	GTNNAC	2 cut(s)	148, 511
Hpy99I	CGWCG	1 cut(s)	241
HpyAV	CCTTC	2 cut(s)	454, 559
HpyCH4III	ACNGT	1 cut(s)	508
HpyCH4V	TGCA	4 cut(s)	4, 94, 193, 397
HpyF10VI	GCNNNNNNNGC	4 cut(s)	199, 239, 423, 469
HpyF3I	CTNAG	1 cut(s)	251
Hsp92II	CATG	2 cut(s)	601, 631
HspAI	GCGC	1 cut(s)	167
KpnI	GGTACC	1 cut(s)	35
Kzo9I	GATC	2 cut(s)	292, 579
LmnI	GCTCC	1 cut(s)	691
LpnPI	CCDG	9 cut(s)	24, 48, 127, 264, 398, 514, 622, 626, 653
Lsp1109I	GCAGC	2 cut(s)	297, 531
LweI	GCATC	5 cut(s)	126, 154, 227, 472, 481
MaeI	CTAG	1 cut(s)	47
MaeIII	GTNAC	2 cut(s)	456, 646
MalI	GATC	2 cut(s)	294, 581
MboI	GATC	2 cut(s)	292, 579
MboII	GAAGA	1 cut(s)	304
MflI	RGATCY	1 cut(s)	579
MhlI	GDGCHC	3 cut(s)	333, 591, 696
MluCI	AATT	2 cut(s)	84, 121
MnlI	CCTC	9 cut(s)	53, 154, 244, 509, 551, 576, 679, 682, 709
MroXI	GAANNNNTTC	1 cut(s)	12
MseI	TTAA	1 cut(s)	705
MslI	CAYNNNNRTG	3 cut(s)	266, 596, 602
MspI	CCGG	1 cut(s)	35
MspR9I	CCNGG	1 cut(s)	641
Mva1269I	GAATGC	1 cut(s)	426
MvaI	CCWGG	1 cut(s)	641
MvnI	CGCG	2 cut(s)	335, 422
MwoI	GCNNNNNNNGC	4 cut(s)	199, 239, 423, 469
NdeII	GATC	2 cut(s)	292, 579
NlaIII	CATG	2 cut(s)	601, 631
NlaIV	GGNNCC	2 cut(s)	33, 589
NmuCI	GTSAC	2 cut(s)	456, 646
PceI	AGGCCT	1 cut(s)	42
PctI	GAATGC	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	12
PflMI	CCANNNNNTGG	1 cut(s)	176
PfoI	TCCNGGA	1 cut(s)	639
PkrI	GCNGC	3 cut(s)	137, 287, 521
PsiI	TTATAA	1 cut(s)	89
Psp124BI	GAGCTC	1 cut(s)	333
Psp6I	CCWGG	1 cut(s)	639
PspGI	CCWGG	1 cut(s)	639
PspN4I	GGNNCC	2 cut(s)	33, 589
PspOMI	GGGCCC	1 cut(s)	587
PspPI	GGNCC	4 cut(s)	531, 538, 587, 588
PstNI	CAGNNNCTG	1 cut(s)	199
PsuI	RGATCY	1 cut(s)	579
RsaI	GTAC	1 cut(s)	33
RsaNI	GTAC	1 cut(s)	32
RseI	CAYNNNNRTG	3 cut(s)	266, 596, 602
SacI	GAGCTC	1 cut(s)	333
SaqAI	TTAA	1 cut(s)	705
SatI	GCNGC	3 cut(s)	136, 286, 520
Sau3AI	GATC	2 cut(s)	292, 579
Sau96I	GGNCC	4 cut(s)	531, 538, 587, 588
ScrFI	CCNGG	1 cut(s)	641
SduI	GDGCHC	3 cut(s)	333, 591, 696
SetI	ASST	5 cut(s)	69, 283, 333, 524, 653
SfaNI	GCATC	5 cut(s)	126, 154, 227, 472, 481
SfcI	CTRYAG	1 cut(s)	412
SfiI	GGCCNNNNNGGCC	1 cut(s)	239
SinI	GGWCC	1 cut(s)	531
SmiMI	CAYNNNNRTG	3 cut(s)	266, 596, 602
Sse9I	AATT	2 cut(s)	84, 121
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	4 cut(s)	133, 136, 188, 461
SspMI	CTAG	1 cut(s)	47
SstI	GAGCTC	1 cut(s)	333
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	1 cut(s)	639
StyI	CCWWGG	1 cut(s)	534
TaaI	ACNGT	1 cut(s)	508
TaqI	TCGA	4 cut(s)	82, 221, 236, 295
TasI	AATT	2 cut(s)	84, 121
TauI	GCSGC	1 cut(s)	138
Tru1I	TTAA	1 cut(s)	705
Tru9I	TTAA	1 cut(s)	705
TscAI	CASTG	2 cut(s)	204, 511
TseFI	GTSAC	2 cut(s)	456, 646
TseI	GCWGC	2 cut(s)	285, 519
Tsp45I	GTSAC	2 cut(s)	456, 646
TspDTI	ATGAA	1 cut(s)	720
TspGWI	ACGGA	1 cut(s)	533
TspRI	CASTG	2 cut(s)	204, 511
Van91I	CCANNNNNTGG	1 cut(s)	176
VpaK11BI	GGWCC	1 cut(s)	531
XagI	CCTNNNNNAGG	1 cut(s)	707
XmiI	GTMKAC	1 cut(s)	147
XmnI	GAANNNNTTC	1 cut(s)	12
XspI	CTAG	1 cut(s)	47

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.