Translation machinery associated TMA7
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15270 AT3G16040 |
| fragaria_vesca | FvH4_1g16510 |
| malus_domestica | MD17G1194100.v1.1 |
| prunus_persica | Prupe.3G069900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0106421 RchiOBHm_Chr2g0138111 |
| rosa_multiflora | Rmu_sc0004015.1_g000002 Rmu_sc0016473.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00106460 Rroxscaffold_2G00137200 |
| rosa_rugosa | Rorug02G0349700 Rorug07G0162500 |
| rosa_samantha | Rh2AG186500 Rh2AG396300 Rh2BG196700 Rh2BG410300 Rh2CG191500 Rh2CG382800 Rh2DG192600 Rh2DG418000 Rh5AG147200 Rh5AG389200 |
| rosa_wichuraiana | Rw2G014530 Rw2G032360 Rw2G032410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 147, 160 |
| AcoI | YGGCCR | 1 cut(s) | 81 |
| AcuI | CTGAAG | 1 cut(s) | 140 |
| AfaI | GTAC | 1 cut(s) | 65 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| AlwI | GGATC | 2 cut(s) | 147, 160 |
| AoxI | GGCC | 1 cut(s) | 81 |
| BalI | TGGCCA | 1 cut(s) | 83 |
| BamHI | GGATCC | 1 cut(s) | 152 |
| BanII | GRGCYC | 1 cut(s) | 174 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 47, 79 |
| BmiI | GGNNCC | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 1 cut(s) | 158 |
| BsaJI | CCNNGG | 1 cut(s) | 135 |
| BseDI | CCNNGG | 1 cut(s) | 135 |
| BseYI | CCCAGC | 1 cut(s) | 167 |
| BshFI | GGCC | 1 cut(s) | 83 |
| BsnI | GGCC | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 174 |
| Bsp143I | GATC | 1 cut(s) | 152 |
| BspANI | GGCC | 1 cut(s) | 83 |
| BspLI | GGNNCC | 1 cut(s) | 154 |
| BspPI | GGATC | 2 cut(s) | 147, 160 |
| BssECI | CCNNGG | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 152 |
| BssT1I | CCWWGG | 1 cut(s) | 135 |
| BstDEI | CTNAG | 1 cut(s) | 128 |
| BstKTI | GATC | 1 cut(s) | 155 |
| BstMBI | GATC | 1 cut(s) | 152 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 37 |
| BstX2I | RGATCY | 1 cut(s) | 152 |
| BstYI | RGATCY | 1 cut(s) | 152 |
| BsuRI | GGCC | 1 cut(s) | 83 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| Csp6I | GTAC | 1 cut(s) | 64 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 33, 163 |
| CviJI | RGCY | 5 cut(s) | 31, 83, 127, 134, 172 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 83, 127, 134, 172 |
| CviQI | GTAC | 1 cut(s) | 64 |
| DdeI | CTNAG | 1 cut(s) | 128 |
| DpnI | GATC | 1 cut(s) | 154 |
| DpnII | GATC | 1 cut(s) | 152 |
| EaeI | YGGCCR | 1 cut(s) | 81 |
| Eco130I | CCWWGG | 1 cut(s) | 135 |
| Eco24I | GRGCYC | 1 cut(s) | 174 |
| Eco57I | CTGAAG | 1 cut(s) | 140 |
| EcoT14I | CCWWGG | 1 cut(s) | 135 |
| EcoT38I | GRGCYC | 1 cut(s) | 174 |
| ErhI | CCWWGG | 1 cut(s) | 135 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 140, 172 |
| FriOI | GRGCYC | 1 cut(s) | 174 |
| GsaI | CCCAGC | 1 cut(s) | 171 |
| HaeIII | GGCC | 1 cut(s) | 83 |
| HinfI | GANTC | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 76, 93 |
| Hpy188III | TCNNGA | 1 cut(s) | 175 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 2 cut(s) | 115, 142 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 37 |
| HpyF3I | CTNAG | 1 cut(s) | 128 |
| Kzo9I | GATC | 1 cut(s) | 152 |
| LmnI | GCTCC | 1 cut(s) | 124 |
| LpnPI | CCDG | 1 cut(s) | 153 |
| MalI | GATC | 1 cut(s) | 154 |
| MboI | GATC | 1 cut(s) | 152 |
| MboII | GAAGA | 2 cut(s) | 67, 106 |
| MflI | RGATCY | 1 cut(s) | 152 |
| MhlI | GDGCHC | 1 cut(s) | 174 |
| MlsI | TGGCCA | 1 cut(s) | 83 |
| MluNI | TGGCCA | 1 cut(s) | 83 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 2 cut(s) | 100, 155 |
| Mox20I | TGGCCA | 1 cut(s) | 83 |
| MscI | TGGCCA | 1 cut(s) | 83 |
| Msp20I | TGGCCA | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 37 |
| NdeII | GATC | 1 cut(s) | 152 |
| NlaIV | GGNNCC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| PspFI | CCCAGC | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 1 cut(s) | 154 |
| PsuI | RGATCY | 1 cut(s) | 152 |
| RsaI | GTAC | 1 cut(s) | 65 |
| RsaNI | GTAC | 1 cut(s) | 64 |
| Sau3AI | GATC | 1 cut(s) | 152 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SduI | GDGCHC | 1 cut(s) | 174 |
| SetI | ASST | 3 cut(s) | 19, 129, 166 |
| SgeI | CNNG | 8 cut(s) | 22, 26, 58, 64, 82, 148, 180, 187 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| StyI | CCWWGG | 1 cut(s) | 135 |
| TscAI | CASTG | 1 cut(s) | 123 |
| TspRI | CASTG | 1 cut(s) | 123 |