Translation machinery associated TMA7
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15270 AT3G16040 |
| fragaria_vesca | FvH4_1g16510 |
| malus_domestica | MD17G1194100.v1.1 |
| prunus_persica | Prupe.3G069900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0106421 RchiOBHm_Chr2g0138111 |
| rosa_multiflora | Rmu_sc0004015.1_g000002 Rmu_sc0016473.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00106460 Rroxscaffold_2G00137200 |
| rosa_rugosa | Rorug02G0349700 Rorug07G0162500 |
| rosa_samantha | Rh2AG186500 Rh2AG396300 Rh2BG196700 Rh2BG410300 Rh2CG191500 Rh2CG382800 Rh2DG192600 Rh2DG418000 Rh5AG147200 Rh5AG389200 |
| rosa_wichuraiana | Rw2G014530 Rw2G032360 Rw2G032410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 203 |
| AcoI | YGGCCR | 2 cut(s) | 67, 234 |
| AcuI | CTGAAG | 3 cut(s) | 209, 227, 293 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 301 |
| AluBI | AGCT | 3 cut(s) | 241, 280, 320 |
| AluI | AGCT | 3 cut(s) | 241, 280, 320 |
| Alw21I | GWGCWC | 1 cut(s) | 282 |
| Alw26I | GTCTC | 1 cut(s) | 83 |
| AoxI | GGCC | 4 cut(s) | 67, 234, 291, 322 |
| AspS9I | GGNCC | 1 cut(s) | 292 |
| BalI | TGGCCA | 2 cut(s) | 69, 236 |
| BanII | GRGCYC | 1 cut(s) | 282 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 200, 232 |
| Bbv12I | GWGCWC | 1 cut(s) | 282 |
| BccI | CCATC | 1 cut(s) | 92 |
| BcoDI | GTCTC | 1 cut(s) | 83 |
| BisI | GCNGC | 1 cut(s) | 204 |
| BlsI | GCNGC | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 1 cut(s) | 292 |
| BmsI | GCATC | 1 cut(s) | 11 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 309, 341 |
| BpuEI | CTTGAG | 1 cut(s) | 311 |
| BsaJI | CCNNGG | 3 cut(s) | 132, 198, 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 301 |
| BseDI | CCNNGG | 3 cut(s) | 132, 198, 288 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 301 |
| BseMII | CTCAG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 1 cut(s) | 330 |
| BshFI | GGCC | 4 cut(s) | 69, 236, 293, 324 |
| BsiHKAI | GWGCWC | 1 cut(s) | 282 |
| BslFI | GGGAC | 1 cut(s) | 319 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 301 |
| BsmAI | GTCTC | 1 cut(s) | 83 |
| BsmFI | GGGAC | 1 cut(s) | 319 |
| BsnI | GGCC | 4 cut(s) | 69, 236, 293, 324 |
| Bsp1286I | GDGCHC | 1 cut(s) | 282 |
| BspACI | CCGC | 1 cut(s) | 203 |
| BspANI | GGCC | 4 cut(s) | 69, 236, 293, 324 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BssECI | CCNNGG | 3 cut(s) | 132, 198, 288 |
| BssT1I | CCWWGG | 3 cut(s) | 132, 198, 288 |
| BstC8I | GCNNGC | 1 cut(s) | 322 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstMAI | GTCTC | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 190 |
| BsuRI | GGCC | 4 cut(s) | 69, 236, 293, 324 |
| BtsI | GCAGTG | 1 cut(s) | 63 |
| BtsIMutI | CAGTG | 3 cut(s) | 63, 185, 269 |
| Cac8I | GCNNGC | 1 cut(s) | 322 |
| Cfr13I | GGNCC | 1 cut(s) | 292 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CspCI | CAANNNNNGTGG | 5 cut(s) | 39, 74, 151, 186, 316 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviJI | RGCY | 9 cut(s) | 69, 184, 236, 241, 280, 287, 293, 320, 324 |
| CviKI_1 | RGCY | 9 cut(s) | 69, 184, 236, 241, 280, 287, 293, 320, 324 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| EaeI | YGGCCR | 2 cut(s) | 67, 234 |
| Ecl136II | GAGCTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 3 cut(s) | 132, 198, 288 |
| Eco24I | GRGCYC | 1 cut(s) | 282 |
| Eco53kI | GAGCTC | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 3 cut(s) | 209, 227, 293 |
| EcoICRI | GAGCTC | 1 cut(s) | 280 |
| EcoT14I | CCWWGG | 3 cut(s) | 132, 198, 288 |
| EcoT38I | GRGCYC | 1 cut(s) | 282 |
| ErhI | CCWWGG | 3 cut(s) | 132, 198, 288 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 2 cut(s) | 86, 155 |
| FaqI | GGGAC | 1 cut(s) | 319 |
| FatI | CATG | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 1 cut(s) | 204 |
| FriOI | GRGCYC | 1 cut(s) | 282 |
| Fsp4HI | GCNGC | 1 cut(s) | 204 |
| GluI | GCNGC | 1 cut(s) | 204 |
| HaeIII | GGCC | 4 cut(s) | 69, 236, 293, 324 |
| Hin1II | CATG | 1 cut(s) | 157 |
| HindIII | AAGCTT | 1 cut(s) | 239 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 246 |
| Hpy188III | TCNNGA | 1 cut(s) | 328 |
| Hpy99I | CGWCG | 2 cut(s) | 120, 224 |
| HpyAV | CCTTC | 3 cut(s) | 205, 268, 295 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 190 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| LmnI | GCTCC | 2 cut(s) | 277, 317 |
| LpnPI | CCDG | 1 cut(s) | 306 |
| LweI | GCATC | 1 cut(s) | 11 |
| MboII | GAAGA | 4 cut(s) | 220, 239, 259, 262 |
| MhlI | GDGCHC | 1 cut(s) | 282 |
| MlsI | TGGCCA | 2 cut(s) | 69, 236 |
| MluCI | AATT | 1 cut(s) | 105 |
| MluNI | TGGCCA | 2 cut(s) | 69, 236 |
| MmeI | TCCRAC | 1 cut(s) | 120 |
| MnlI | CCTC | 5 cut(s) | 26, 217, 253, 308, 335 |
| Mox20I | TGGCCA | 2 cut(s) | 69, 236 |
| MscI | TGGCCA | 2 cut(s) | 69, 236 |
| Msp20I | TGGCCA | 2 cut(s) | 69, 236 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 190 |
| NlaIII | CATG | 1 cut(s) | 157 |
| PkrI | GCNGC | 1 cut(s) | 205 |
| Psp124BI | GAGCTC | 1 cut(s) | 282 |
| PspPI | GGNCC | 1 cut(s) | 292 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| SacI | GAGCTC | 1 cut(s) | 282 |
| SatI | GCNGC | 1 cut(s) | 204 |
| Sau96I | GGNCC | 1 cut(s) | 292 |
| SduI | GDGCHC | 1 cut(s) | 282 |
| SetI | ASST | 4 cut(s) | 172, 243, 282, 322 |
| SfaNI | GCATC | 1 cut(s) | 11 |
| SmlI | CTYRAG | 1 cut(s) | 326 |
| SmoI | CTYRAG | 1 cut(s) | 326 |
| Sse9I | AATT | 1 cut(s) | 105 |
| SsiI | CCGC | 1 cut(s) | 203 |
| SstI | GAGCTC | 1 cut(s) | 282 |
| StyI | CCWWGG | 3 cut(s) | 132, 198, 288 |
| TasI | AATT | 1 cut(s) | 105 |
| TauI | GCSGC | 1 cut(s) | 206 |
| TscAI | CASTG | 3 cut(s) | 63, 192, 276 |
| TspDTI | ATGAA | 1 cut(s) | 99 |
| TspRI | CASTG | 3 cut(s) | 63, 192, 276 |