The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g31020 FvH4_6g31020 FvH4_6g31020 FvH4_6g31020 FvH4_6g31020 FvH4_6g31020 |
| malus_domestica | MD06G1184200.v1.1 MD06G1184300.v1.1 |
| prunus_persica | Prupe.3G072200_v2.0.a1 Prupe.I003100_v2.0.a1 Prupe.I003100_v2.0.a1 Prupe.I003200_v2.0.a1 |
| pyrus_communis | pycom06g16350 |
| rosa_chinensis | RchiOBHm_Chr2g0137681 RchiOBHm_Chr2g0137721 |
| rosa_laevigata | RLG00000019669 RLG00000019671 |
| rosa_multiflora | Rmu_sc0007226.1_g000005 Rmu_sc0017146.1_g000001 Rmu_sc0032769.1_g000001 Rmu_sc0036488.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00106900 Rroxscaffold_2G00106920 |
| rosa_rugosa | Rorug02G0344000 |
| rosa_samantha | Rh2AG391900 Rh2BG399300 Rh2BG399500 Rh2BG399700 Rh2DG414400 |
| rosa_wichuraiana | Rw2G032100 Rw2G032130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 368 |
| AccB1I | GGYRCC | 1 cut(s) | 494 |
| AccII | CGCG | 1 cut(s) | 204 |
| AciI | CCGC | 2 cut(s) | 224, 588 |
| AclWI | GGATC | 2 cut(s) | 72, 853 |
| AcoI | YGGCCR | 1 cut(s) | 547 |
| AcsI | RAATTY | 1 cut(s) | 29 |
| AcuI | CTGAAG | 1 cut(s) | 565 |
| AdeI | CACNNNGTG | 1 cut(s) | 433 |
| AfaI | GTAC | 2 cut(s) | 239, 403 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 783 |
| AgsI | TTSAA | 5 cut(s) | 160, 650, 802, 815, 841 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 502, 534 |
| AluBI | AGCT | 4 cut(s) | 373, 701, 721, 935 |
| AluI | AGCT | 4 cut(s) | 373, 701, 721, 935 |
| Alw21I | GWGCWC | 1 cut(s) | 690 |
| AlwI | GGATC | 2 cut(s) | 72, 853 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 743 |
| AoxI | GGCC | 2 cut(s) | 547, 825 |
| ApoI | RAATTY | 1 cut(s) | 29 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 155 |
| AspS9I | GGNCC | 1 cut(s) | 825 |
| AsuHPI | GGTGA | 1 cut(s) | 165 |
| BalI | TGGCCA | 1 cut(s) | 549 |
| BanI | GGYRCC | 1 cut(s) | 494 |
| Bbv12I | GWGCWC | 1 cut(s) | 690 |
| BccI | CCATC | 5 cut(s) | 259, 330, 485, 539, 743 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 611, 645 |
| BfaI | CTAG | 4 cut(s) | 92, 477, 674, 788 |
| BfmI | CTRYAG | 1 cut(s) | 525 |
| BglII | AGATCT | 1 cut(s) | 408 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlpI | GCTNAGC | 1 cut(s) | 717 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 1 cut(s) | 825 |
| BmiI | GGNNCC | 2 cut(s) | 496, 880 |
| BmsI | GCATC | 3 cut(s) | 426, 491, 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 633 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 717 |
| Bsa29I | ATCGAT | 1 cut(s) | 573 |
| BsaBI | GATNNNNATC | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 2 cut(s) | 83, 144 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 783 |
| Bse1I | ACTGG | 3 cut(s) | 133, 176, 215 |
| Bse8I | GATNNNNATC | 1 cut(s) | 69 |
| BseCI | ATCGAT | 1 cut(s) | 573 |
| BseDI | CCNNGG | 2 cut(s) | 83, 144 |
| BseGI | GGATG | 3 cut(s) | 70, 322, 754 |
| BseJI | GATNNNNATC | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 783 |
| BseMII | CTCAG | 6 cut(s) | 57, 69, 159, 419, 708, 735 |
| BseNI | ACTGG | 3 cut(s) | 133, 176, 215 |
| Bsh1236I | CGCG | 1 cut(s) | 204 |
| BshFI | GGCC | 2 cut(s) | 549, 827 |
| BshNI | GGYRCC | 1 cut(s) | 494 |
| BshVI | ATCGAT | 1 cut(s) | 573 |
| BsiHKAI | GWGCWC | 1 cut(s) | 690 |
| BslFI | GGGAC | 1 cut(s) | 656 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 783 |
| BsmFI | GGGAC | 1 cut(s) | 656 |
| BsmI | GAATGC | 2 cut(s) | 421, 775 |
| BsnI | GGCC | 2 cut(s) | 549, 827 |
| Bsp1286I | GDGCHC | 1 cut(s) | 690 |
| Bsp143I | GATC | 4 cut(s) | 64, 273, 408, 845 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 717 |
| Bsp19I | CCATGG | 2 cut(s) | 83, 144 |
| BspACI | CCGC | 2 cut(s) | 224, 588 |
| BspANI | GGCC | 2 cut(s) | 549, 827 |
| BspCNI | CTCAG | 6 cut(s) | 56, 70, 160, 418, 709, 736 |
| BspDI | ATCGAT | 1 cut(s) | 573 |
| BspFNI | CGCG | 1 cut(s) | 204 |
| BspHI | TCATGA | 1 cut(s) | 682 |
| BspLI | GGNNCC | 2 cut(s) | 496, 880 |
| BspPI | GGATC | 2 cut(s) | 72, 853 |
| BspT107I | GGYRCC | 1 cut(s) | 494 |
| BsrI | ACTGG | 3 cut(s) | 133, 176, 215 |
| BssECI | CCNNGG | 2 cut(s) | 83, 144 |
| BssMI | GATC | 4 cut(s) | 64, 273, 408, 845 |
| BssT1I | CCWWGG | 2 cut(s) | 83, 144 |
| Bst4CI | ACNGT | 2 cut(s) | 739, 837 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstDEI | CTNAG | 9 cut(s) | 43, 78, 168, 405, 541, 633, 717, 744, 936 |
| BstDSI | CCRYGG | 2 cut(s) | 83, 144 |
| BstF5I | GGATG | 3 cut(s) | 70, 322, 754 |
| BstFNI | CGCG | 1 cut(s) | 204 |
| BstKTI | GATC | 4 cut(s) | 67, 276, 411, 848 |
| BstMBI | GATC | 4 cut(s) | 64, 273, 408, 845 |
| BstSFI | CTRYAG | 1 cut(s) | 525 |
| BstUI | CGCG | 1 cut(s) | 204 |
| BstX2I | RGATCY | 1 cut(s) | 408 |
| BstYI | RGATCY | 1 cut(s) | 408 |
| Bsu15I | ATCGAT | 1 cut(s) | 573 |
| BsuRI | GGCC | 2 cut(s) | 549, 827 |
| BsuTUI | ATCGAT | 1 cut(s) | 573 |
| BtgI | CCRYGG | 2 cut(s) | 83, 144 |
| BtgZI | GCGATG | 1 cut(s) | 468 |
| BtsCI | GGATG | 3 cut(s) | 70, 322, 754 |
| BtsIMutI | CAGTG | 2 cut(s) | 165, 183 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| CaiI | CAGNNNCTG | 1 cut(s) | 743 |
| CciI | TCATGA | 1 cut(s) | 682 |
| Cfr13I | GGNCC | 1 cut(s) | 825 |
| ClaI | ATCGAT | 1 cut(s) | 573 |
| Csp6I | GTAC | 2 cut(s) | 238, 402 |
| CviAII | CATG | 6 cut(s) | 84, 145, 348, 399, 683, 713 |
| CviQI | GTAC | 2 cut(s) | 238, 402 |
| DdeI | CTNAG | 9 cut(s) | 43, 78, 168, 405, 541, 633, 717, 744, 936 |
| DpnI | GATC | 4 cut(s) | 66, 275, 410, 847 |
| DpnII | GATC | 4 cut(s) | 64, 273, 408, 845 |
| DraIII | CACNNNGTG | 1 cut(s) | 433 |
| EaeI | YGGCCR | 1 cut(s) | 547 |
| Eco130I | CCWWGG | 2 cut(s) | 83, 144 |
| Eco57I | CTGAAG | 1 cut(s) | 565 |
| EcoT14I | CCWWGG | 2 cut(s) | 83, 144 |
| ErhI | CCWWGG | 2 cut(s) | 83, 144 |
| FaeI | CATG | 6 cut(s) | 87, 148, 351, 402, 686, 716 |
| FaqI | GGGAC | 1 cut(s) | 656 |
| FatI | CATG | 6 cut(s) | 83, 144, 347, 398, 682, 712 |
| FauI | CCCGC | 1 cut(s) | 581 |
| FauNDI | CATATG | 1 cut(s) | 764 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| FokI | GGATG | 3 cut(s) | 57, 309, 761 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| FspBI | CTAG | 4 cut(s) | 92, 477, 674, 788 |
| GluI | GCNGC | 1 cut(s) | 225 |
| HaeIII | GGCC | 2 cut(s) | 549, 827 |
| Hin1II | CATG | 6 cut(s) | 87, 148, 351, 402, 686, 716 |
| HincII | GTYRAC | 1 cut(s) | 925 |
| HindII | GTYRAC | 1 cut(s) | 925 |
| HindIII | AAGCTT | 2 cut(s) | 371, 933 |
| HinfI | GANTC | 3 cut(s) | 88, 170, 917 |
| HphI | GGTGA | 1 cut(s) | 165 |
| Hpy166II | GTNNAC | 2 cut(s) | 537, 925 |
| Hpy188I | TCNGA | 6 cut(s) | 46, 355, 408, 456, 619, 745 |
| Hpy188III | TCNNGA | 6 cut(s) | 108, 124, 307, 674, 683, 812 |
| Hpy8I | GTNNAC | 2 cut(s) | 537, 925 |
| HpyAV | CCTTC | 3 cut(s) | 166, 382, 671 |
| HpyCH4III | ACNGT | 2 cut(s) | 739, 837 |
| HpyCH4V | TGCA | 6 cut(s) | 439, 482, 570, 667, 773, 860 |
| HpyF3I | CTNAG | 9 cut(s) | 43, 78, 168, 405, 541, 633, 717, 744, 936 |
| Hsp92II | CATG | 6 cut(s) | 87, 148, 351, 402, 686, 716 |
| Kzo9I | GATC | 4 cut(s) | 64, 273, 408, 845 |
| LpnPI | CCDG | 6 cut(s) | 93, 109, 146, 189, 196, 292 |
| LweI | GCATC | 3 cut(s) | 426, 491, 579 |
| MaeI | CTAG | 4 cut(s) | 92, 477, 674, 788 |
| MaeIII | GTNAC | 5 cut(s) | 135, 163, 171, 217, 694 |
| MalI | GATC | 4 cut(s) | 66, 275, 410, 847 |
| MboI | GATC | 4 cut(s) | 64, 273, 408, 845 |
| MboII | GAAGA | 1 cut(s) | 403 |
| MflI | RGATCY | 1 cut(s) | 408 |
| MhlI | GDGCHC | 1 cut(s) | 690 |
| MlsI | TGGCCA | 1 cut(s) | 549 |
| MluCI | AATT | 4 cut(s) | 29, 565, 732, 797 |
| MluNI | TGGCCA | 1 cut(s) | 549 |
| MlyI | GAGTC | 1 cut(s) | 179 |
| MmeI | TCCRAC | 1 cut(s) | 98 |
| MnlI | CCTC | 4 cut(s) | 15, 174, 739, 938 |
| Mox20I | TGGCCA | 1 cut(s) | 549 |
| MroXI | GAANNNNTTC | 1 cut(s) | 155 |
| MscI | TGGCCA | 1 cut(s) | 549 |
| MseI | TTAA | 5 cut(s) | 54, 450, 501, 564, 891 |
| Msp20I | TGGCCA | 1 cut(s) | 549 |
| MspA1I | CMGCKG | 1 cut(s) | 701 |
| Mva1269I | GAATGC | 2 cut(s) | 421, 775 |
| MvnI | CGCG | 1 cut(s) | 204 |
| NcoI | CCATGG | 2 cut(s) | 83, 144 |
| NdeI | CATATG | 1 cut(s) | 764 |
| NdeII | GATC | 4 cut(s) | 64, 273, 408, 845 |
| NlaIII | CATG | 6 cut(s) | 87, 148, 351, 402, 686, 716 |
| NlaIV | GGNNCC | 2 cut(s) | 496, 880 |
| NmuCI | GTSAC | 3 cut(s) | 135, 163, 171 |
| PagI | TCATGA | 1 cut(s) | 682 |
| PctI | GAATGC | 2 cut(s) | 421, 775 |
| PdmI | GAANNNNTTC | 1 cut(s) | 155 |
| PfeI | GAWTC | 2 cut(s) | 88, 917 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PsiI | TTATAA | 1 cut(s) | 368 |
| PspN4I | GGNNCC | 2 cut(s) | 496, 880 |
| PspPI | GGNCC | 1 cut(s) | 825 |
| PstNI | CAGNNNCTG | 1 cut(s) | 743 |
| PsuI | RGATCY | 1 cut(s) | 408 |
| PvuII | CAGCTG | 1 cut(s) | 701 |
| RsaI | GTAC | 2 cut(s) | 239, 403 |
| RsaNI | GTAC | 2 cut(s) | 238, 402 |
| SaqAI | TTAA | 5 cut(s) | 54, 450, 501, 564, 891 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 4 cut(s) | 64, 273, 408, 845 |
| Sau96I | GGNCC | 1 cut(s) | 825 |
| SchI | GAGTC | 1 cut(s) | 179 |
| SduI | GDGCHC | 1 cut(s) | 690 |
| SfaNI | GCATC | 3 cut(s) | 426, 491, 579 |
| SfcI | CTRYAG | 1 cut(s) | 525 |
| Sse9I | AATT | 4 cut(s) | 29, 565, 732, 797 |
| SsiI | CCGC | 2 cut(s) | 224, 588 |
| SspMI | CTAG | 4 cut(s) | 92, 477, 674, 788 |
| StyI | CCWWGG | 2 cut(s) | 83, 144 |
| TaaI | ACNGT | 2 cut(s) | 739, 837 |
| TaqI | TCGA | 1 cut(s) | 573 |
| TasI | AATT | 4 cut(s) | 29, 565, 732, 797 |
| TatI | WGTACW | 2 cut(s) | 237, 401 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TfiI | GAWTC | 2 cut(s) | 88, 917 |
| Tru1I | TTAA | 5 cut(s) | 54, 450, 501, 564, 891 |
| Tru9I | TTAA | 5 cut(s) | 54, 450, 501, 564, 891 |
| TscAI | CASTG | 2 cut(s) | 172, 183 |
| TseFI | GTSAC | 3 cut(s) | 135, 163, 171 |
| Tsp45I | GTSAC | 3 cut(s) | 135, 163, 171 |
| TspDTI | ATGAA | 4 cut(s) | 184, 300, 701, 911 |
| TspRI | CASTG | 2 cut(s) | 172, 183 |
| XapI | RAATTY | 1 cut(s) | 29 |
| XbaI | TCTAGA | 1 cut(s) | 673 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 81 |
| XmnI | GAANNNNTTC | 1 cut(s) | 155 |
| XspI | CTAG | 4 cut(s) | 92, 477, 674, 788 |