Nodulin-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80530 |
| fragaria_vesca | FvH4_1g01960 FvH4_6g29100 FvH4_6g29100 |
| malus_domestica | MD00G1182300.v1.1 MD02G1017800.v1.1 MD02G1017900.v1.1 MD17G1217900.v1.1 |
| prunus_persica | Prupe.3G093500_v2.0.a1 Prupe.3G093500_v2.0.a1 Prupe.3G093500_v2.0.a1 Prupe.7G257000_v2.0.a1 Prupe.7G257000_v2.0.a1 |
| pyrus_communis | pycom02g01580 pycom02g01590 pycom16g23280 pycom17g22210 |
| rosa_chinensis | RchiOBHm_Chr2g0086971 RchiOBHm_Chr2g0134291 |
| rosa_laevigata | RLG00000015819 RLG00000019384 |
| rosa_multiflora | Rmu_co8300459.1_g000001 Rmu_co8420697.1_g000001 Rmu_sc0000418.1_g000001 Rmu_sc0000418.1_g000002 Rmu_sc0014586.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00110360 Rroxscaffold_2G00153980 |
| rosa_rugosa | Rorug01G0471200 Rorug02G0315800 Rorug02G0315900 |
| rosa_samantha | Rh2AG023900 Rh2AG368600 Rh2BG024400 Rh2CG024600 Rh2DG024500 |
| rosa_wichuraiana | Rw2G001880 Rw2G030030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1025 |
| AarI | CACCTGC | 1 cut(s) | 1529 |
| Acc36I | ACCTGC | 1 cut(s) | 1529 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 599 |
| AccI | GTMKAC | 1 cut(s) | 486 |
| AciI | CCGC | 2 cut(s) | 35, 1031 |
| AclWI | GGATC | 1 cut(s) | 857 |
| AcoI | YGGCCR | 1 cut(s) | 168 |
| AcuI | CTGAAG | 2 cut(s) | 912, 1515 |
| AfaI | GTAC | 7 cut(s) | 129, 572, 589, 1089, 1263, 1309, 1617 |
| AfeI | AGCGCT | 1 cut(s) | 466 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 44, 232, 402, 599, 992 |
| AflII | CTTAAG | 1 cut(s) | 500 |
| AflIII | ACRYGT | 1 cut(s) | 1258 |
| AgsI | TTSAA | 7 cut(s) | 19, 517, 781, 1006, 1362, 1399, 1674 |
| AjnI | CCWGG | 1 cut(s) | 202 |
| AleI | CACNNNNGTG | 1 cut(s) | 383 |
| Alw21I | GWGCWC | 1 cut(s) | 1258 |
| Alw26I | GTCTC | 1 cut(s) | 1155 |
| Alw44I | GTGCAC | 1 cut(s) | 1254 |
| AlwI | GGATC | 1 cut(s) | 857 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 151, 599, 1572 |
| Aor51HI | AGCGCT | 1 cut(s) | 466 |
| AoxI | GGCC | 2 cut(s) | 168, 983 |
| ApaLI | GTGCAC | 1 cut(s) | 1254 |
| ApeKI | GCWGC | 4 cut(s) | 56, 77, 467, 1499 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 942, 1209 |
| AspLEI | GCGC | 2 cut(s) | 467, 1571 |
| AspS9I | GGNCC | 2 cut(s) | 67, 1515 |
| AsuHPI | GGTGA | 1 cut(s) | 628 |
| AsuII | TTCGAA | 1 cut(s) | 821 |
| AvaII | GGWCC | 2 cut(s) | 67, 1515 |
| BaeGI | GKGCMC | 2 cut(s) | 808, 1258 |
| BalI | TGGCCA | 1 cut(s) | 170 |
| BanII | GRGCYC | 1 cut(s) | 11 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 580, 612 |
| BauI | CACGAG | 1 cut(s) | 807 |
| Bbv12I | GWGCWC | 1 cut(s) | 1258 |
| BbvCI | CCTCAGC | 1 cut(s) | 918 |
| BbvI | GCAGC | 4 cut(s) | 43, 64, 454, 1486 |
| BccI | CCATC | 3 cut(s) | 834, 886, 1240 |
| BciT130I | CCWGG | 1 cut(s) | 204 |
| BcoDI | GTCTC | 1 cut(s) | 1155 |
| BfaI | CTAG | 4 cut(s) | 836, 1128, 1472, 1533 |
| BfmI | CTRYAG | 2 cut(s) | 57, 468 |
| BfoI | RGCGCY | 2 cut(s) | 468, 1572 |
| BfrI | CTTAAG | 1 cut(s) | 500 |
| BfuAI | ACCTGC | 1 cut(s) | 1529 |
| BisI | GCNGC | 4 cut(s) | 57, 78, 468, 1500 |
| BlpI | GCTNAGC | 1 cut(s) | 461 |
| BlsI | GCNGC | 4 cut(s) | 58, 79, 469, 1501 |
| BmcAI | AGTACT | 1 cut(s) | 1089 |
| Bme1390I | CCNGG | 1 cut(s) | 204 |
| Bme18I | GGWCC | 2 cut(s) | 67, 1515 |
| BmgT120I | GGNCC | 2 cut(s) | 67, 1515 |
| BmiI | GGNNCC | 3 cut(s) | 68, 1371, 1516 |
| BmrFI | CCNGG | 1 cut(s) | 204 |
| BmrI | ACTGGG | 2 cut(s) | 5, 140 |
| BmsI | GCATC | 4 cut(s) | 345, 703, 1347, 1480 |
| BmuI | ACTGGG | 2 cut(s) | 5, 140 |
| BpmI | CTGGAG | 2 cut(s) | 576, 621 |
| Bpu10I | CCTNAGC | 1 cut(s) | 918 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 461 |
| Bpu14I | TTCGAA | 1 cut(s) | 821 |
| BpuEI | CTTGAG | 1 cut(s) | 1612 |
| BsaAI | YACGTR | 1 cut(s) | 1261 |
| BsaJI | CCNNGG | 3 cut(s) | 38, 230, 898 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 45, 75, 174, 204, 1071, 1101 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 44, 232, 402, 599, 992 |
| Bse1I | ACTGG | 4 cut(s) | 11, 135, 171, 1622 |
| Bse3DI | GCAATG | 3 cut(s) | 348, 370, 853 |
| BseBI | CCWGG | 1 cut(s) | 204 |
| BseDI | CCNNGG | 3 cut(s) | 38, 230, 898 |
| BseGI | GGATG | 2 cut(s) | 878, 1251 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 44, 232, 402, 599, 992 |
| BseMI | GCAATG | 3 cut(s) | 348, 370, 853 |
| BseMII | CTCAG | 6 cut(s) | 430, 909, 1228, 1315, 1367, 1476 |
| BseNI | ACTGG | 4 cut(s) | 11, 135, 171, 1622 |
| BseSI | GKGCMC | 2 cut(s) | 808, 1258 |
| BseXI | GCAGC | 4 cut(s) | 43, 64, 454, 1486 |
| BseYI | CCCAGC | 1 cut(s) | 1643 |
| BshFI | GGCC | 2 cut(s) | 170, 985 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1258 |
| BslFI | GGGAC | 3 cut(s) | 1363, 1443, 1597 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 44, 232, 402, 599, 992 |
| BsmAI | GTCTC | 1 cut(s) | 1155 |
| BsmFI | GGGAC | 3 cut(s) | 1363, 1443, 1597 |
| BsmI | GAATGC | 1 cut(s) | 438 |
| BsnI | GGCC | 2 cut(s) | 170, 985 |
| Bsp119I | TTCGAA | 1 cut(s) | 821 |
| Bsp1286I | GDGCHC | 3 cut(s) | 11, 808, 1258 |
| Bsp143I | GATC | 1 cut(s) | 862 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 461 |
| Bsp19I | CCATGG | 1 cut(s) | 38 |
| BspACI | CCGC | 2 cut(s) | 35, 1031 |
| BspANI | GGCC | 2 cut(s) | 170, 985 |
| BspCNI | CTCAG | 6 cut(s) | 429, 910, 1227, 1314, 1366, 1475 |
| BspHI | TCATGA | 2 cut(s) | 910, 1012 |
| BspLI | GGNNCC | 3 cut(s) | 68, 1371, 1516 |
| BspMAI | CTGCAG | 2 cut(s) | 61, 472 |
| BspMI | ACCTGC | 1 cut(s) | 1529 |
| BspPI | GGATC | 1 cut(s) | 857 |
| BspT104I | TTCGAA | 1 cut(s) | 821 |
| BspTI | CTTAAG | 1 cut(s) | 500 |
| BsrDI | GCAATG | 3 cut(s) | 348, 370, 853 |
| BsrI | ACTGG | 4 cut(s) | 11, 135, 171, 1622 |
| BssECI | CCNNGG | 3 cut(s) | 38, 230, 898 |
| BssMI | GATC | 1 cut(s) | 862 |
| BssNAI | GTATAC | 1 cut(s) | 487 |
| BssSI | CACGAG | 1 cut(s) | 807 |
| BssT1I | CCWWGG | 3 cut(s) | 38, 230, 898 |
| Bst1107I | GTATAC | 1 cut(s) | 487 |
| Bst2BI | CACGAG | 1 cut(s) | 807 |
| Bst2UI | CCWGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 8 cut(s) | 430, 481, 491, 646, 679, 685, 1087, 1146 |
| Bst6I | CTCTTC | 1 cut(s) | 638 |
| BstAFI | CTTAAG | 1 cut(s) | 500 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1124 |
| BstBAI | YACGTR | 1 cut(s) | 1261 |
| BstBI | TTCGAA | 1 cut(s) | 821 |
| BstC8I | GCNNGC | 7 cut(s) | 214, 291, 313, 317, 436, 660, 1567 |
| BstDEI | CTNAG | 9 cut(s) | 416, 461, 707, 918, 987, 1214, 1301, 1353, 1462 |
| BstDSI | CCRYGG | 1 cut(s) | 38 |
| BstF5I | GGATG | 2 cut(s) | 878, 1251 |
| BstH2I | RGCGCY | 2 cut(s) | 468, 1572 |
| BstHHI | GCGC | 2 cut(s) | 467, 1571 |
| BstKTI | GATC | 1 cut(s) | 865 |
| BstMAI | GTCTC | 1 cut(s) | 1155 |
| BstMBI | GATC | 1 cut(s) | 862 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 86, 857, 1124, 1499 |
| BstNI | CCWGG | 1 cut(s) | 204 |
| BstNSI | RCATGY | 3 cut(s) | 319, 623, 1254 |
| BstSCI | CCNGG | 1 cut(s) | 202 |
| BstSFI | CTRYAG | 2 cut(s) | 57, 468 |
| BstSLI | GKGCMC | 2 cut(s) | 808, 1258 |
| BstV1I | GCAGC | 4 cut(s) | 43, 64, 454, 1486 |
| BstX2I | RGATCY | 1 cut(s) | 862 |
| BstYI | RGATCY | 1 cut(s) | 862 |
| BstZ17I | GTATAC | 1 cut(s) | 487 |
| BsuRI | GGCC | 2 cut(s) | 170, 985 |
| BtgI | CCRYGG | 1 cut(s) | 38 |
| BtsCI | GGATG | 2 cut(s) | 878, 1251 |
| BtsI | GCAGTG | 2 cut(s) | 972, 1323 |
| BtsIMutI | CAGTG | 8 cut(s) | 178, 426, 486, 496, 655, 972, 1309, 1323 |
| BveI | ACCTGC | 1 cut(s) | 1529 |
| Cac8I | GCNNGC | 7 cut(s) | 214, 291, 313, 317, 436, 660, 1567 |
| CaiI | CAGNNNCTG | 3 cut(s) | 151, 599, 1572 |
| CciI | TCATGA | 2 cut(s) | 910, 1012 |
| CfoI | GCGC | 2 cut(s) | 467, 1571 |
| Cfr13I | GGNCC | 2 cut(s) | 67, 1515 |
| Csp6I | GTAC | 7 cut(s) | 128, 571, 588, 1088, 1262, 1308, 1616 |
| CviAII | CATG | 9 cut(s) | 39, 316, 400, 585, 620, 911, 1013, 1251, 1426 |
| CviQI | GTAC | 7 cut(s) | 128, 571, 588, 1088, 1262, 1308, 1616 |
| DdeI | CTNAG | 9 cut(s) | 416, 461, 707, 918, 987, 1214, 1301, 1353, 1462 |
| DpnI | GATC | 1 cut(s) | 864 |
| DpnII | GATC | 1 cut(s) | 862 |
| EaeI | YGGCCR | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 638 |
| EarI | CTCTTC | 1 cut(s) | 638 |
| EciI | GGCGGA | 1 cut(s) | 1046 |
| Eco130I | CCWWGG | 3 cut(s) | 38, 230, 898 |
| Eco147I | AGGCCT | 1 cut(s) | 985 |
| Eco24I | GRGCYC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 2 cut(s) | 67, 1515 |
| Eco47III | AGCGCT | 1 cut(s) | 466 |
| Eco57I | CTGAAG | 2 cut(s) | 912, 1515 |
| EcoRII | CCWGG | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 3 cut(s) | 38, 230, 898 |
| EcoT22I | ATGCAT | 1 cut(s) | 338 |
| EcoT38I | GRGCYC | 1 cut(s) | 11 |
| ErhI | CCWWGG | 3 cut(s) | 38, 230, 898 |
| FaeI | CATG | 9 cut(s) | 42, 319, 403, 588, 623, 914, 1016, 1254, 1429 |
| FaqI | GGGAC | 3 cut(s) | 1363, 1443, 1597 |
| FatI | CATG | 9 cut(s) | 38, 315, 399, 584, 619, 910, 1012, 1250, 1425 |
| FblI | GTMKAC | 1 cut(s) | 486 |
| Fnu4HI | GCNGC | 4 cut(s) | 57, 78, 468, 1500 |
| FokI | GGATG | 2 cut(s) | 865, 1258 |
| FriOI | GRGCYC | 1 cut(s) | 11 |
| Fsp4HI | GCNGC | 4 cut(s) | 57, 78, 468, 1500 |
| FspBI | CTAG | 4 cut(s) | 836, 1128, 1472, 1533 |
| GlaI | GCGC | 2 cut(s) | 466, 1570 |
| GluI | GCNGC | 4 cut(s) | 57, 78, 468, 1500 |
| GsaI | CCCAGC | 1 cut(s) | 1647 |
| GsuI | CTGGAG | 2 cut(s) | 576, 621 |
| HaeII | RGCGCY | 2 cut(s) | 468, 1572 |
| HaeIII | GGCC | 2 cut(s) | 170, 985 |
| HhaI | GCGC | 2 cut(s) | 467, 1571 |
| Hin1II | CATG | 9 cut(s) | 42, 319, 403, 588, 623, 914, 1016, 1254, 1429 |
| Hin6I | GCGC | 2 cut(s) | 465, 1569 |
| HinP1I | GCGC | 2 cut(s) | 465, 1569 |
| HincII | GTYRAC | 1 cut(s) | 873 |
| HindII | GTYRAC | 1 cut(s) | 873 |
| HindIII | AAGCTT | 1 cut(s) | 1017 |
| HinfI | GANTC | 8 cut(s) | 139, 506, 517, 544, 608, 815, 923, 1351 |
| HphI | GGTGA | 1 cut(s) | 628 |
| Hpy166II | GTNNAC | 5 cut(s) | 487, 873, 1256, 1518, 1627 |
| Hpy188I | TCNGA | 5 cut(s) | 616, 931, 1204, 1217, 1384 |
| Hpy188III | TCNNGA | 5 cut(s) | 600, 911, 1013, 1077, 1591 |
| Hpy8I | GTNNAC | 5 cut(s) | 487, 873, 1256, 1518, 1627 |
| HpyAV | CCTTC | 2 cut(s) | 761, 836 |
| HpyCH4III | ACNGT | 8 cut(s) | 430, 481, 491, 646, 679, 685, 1087, 1146 |
| HpyCH4IV | ACGT | 1 cut(s) | 1260 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 86, 857, 1124, 1499 |
| HpyF3I | CTNAG | 9 cut(s) | 416, 461, 707, 918, 987, 1214, 1301, 1353, 1462 |
| HpySE526I | ACGT | 1 cut(s) | 1260 |
| Hsp92II | CATG | 9 cut(s) | 42, 319, 403, 588, 623, 914, 1016, 1254, 1429 |
| HspAI | GCGC | 2 cut(s) | 465, 1569 |
| Kzo9I | GATC | 1 cut(s) | 862 |
| LmnI | GCTCC | 3 cut(s) | 53, 148, 616 |
| Lsp1109I | GCAGC | 4 cut(s) | 43, 64, 454, 1486 |
| LweI | GCATC | 4 cut(s) | 345, 703, 1347, 1480 |
| MaeI | CTAG | 4 cut(s) | 836, 1128, 1472, 1533 |
| MaeII | ACGT | 1 cut(s) | 1260 |
| MaeIII | GTNAC | 5 cut(s) | 173, 391, 679, 700, 1081 |
| MalI | GATC | 1 cut(s) | 864 |
| MboI | GATC | 1 cut(s) | 862 |
| MflI | RGATCY | 1 cut(s) | 862 |
| MhlI | GDGCHC | 3 cut(s) | 11, 808, 1258 |
| MlsI | TGGCCA | 1 cut(s) | 170 |
| MluCI | AATT | 8 cut(s) | 72, 207, 771, 1096, 1168, 1227, 1414, 1599 |
| MluNI | TGGCCA | 1 cut(s) | 170 |
| MlyI | GAGTC | 2 cut(s) | 148, 1345 |
| MmeI | TCCRAC | 1 cut(s) | 1397 |
| Mox20I | TGGCCA | 1 cut(s) | 170 |
| Mph1103I | ATGCAT | 1 cut(s) | 338 |
| MroXI | GAANNNNTTC | 2 cut(s) | 942, 1209 |
| MscI | TGGCCA | 1 cut(s) | 170 |
| MseI | TTAA | 1 cut(s) | 501 |
| MslI | CAYNNNNRTG | 2 cut(s) | 383, 1407 |
| Msp20I | TGGCCA | 1 cut(s) | 170 |
| MspA1I | CMGCKG | 1 cut(s) | 383 |
| MspCI | CTTAAG | 1 cut(s) | 500 |
| MspR9I | CCNGG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 1 cut(s) | 438 |
| MvaI | CCWGG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 86, 857, 1124, 1499 |
| NcoI | CCATGG | 1 cut(s) | 38 |
| NdeII | GATC | 1 cut(s) | 862 |
| NlaIII | CATG | 9 cut(s) | 42, 319, 403, 588, 623, 914, 1016, 1254, 1429 |
| NlaIV | GGNNCC | 3 cut(s) | 68, 1371, 1516 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 2 cut(s) | 173, 679 |
| NsiI | ATGCAT | 1 cut(s) | 338 |
| NspI | RCATGY | 3 cut(s) | 319, 623, 1254 |
| NspV | TTCGAA | 1 cut(s) | 821 |
| OliI | CACNNNNGTG | 1 cut(s) | 383 |
| PaeI | GCATGC | 1 cut(s) | 319 |
| PagI | TCATGA | 2 cut(s) | 910, 1012 |
| PaqCI | CACCTGC | 1 cut(s) | 1529 |
| PceI | AGGCCT | 1 cut(s) | 985 |
| PctI | GAATGC | 1 cut(s) | 438 |
| PdmI | GAANNNNTTC | 2 cut(s) | 942, 1209 |
| PfeI | GAWTC | 6 cut(s) | 506, 517, 544, 608, 815, 923 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 599 |
| PfoI | TCCNGGA | 1 cut(s) | 202 |
| PkrI | GCNGC | 4 cut(s) | 58, 79, 469, 1501 |
| PleI | GAGTC | 2 cut(s) | 147, 1345 |
| PpsI | GAGTC | 2 cut(s) | 147, 1345 |
| Ppu21I | YACGTR | 1 cut(s) | 1261 |
| PsiI | TTATAA | 1 cut(s) | 1025 |
| Psp6I | CCWGG | 1 cut(s) | 202 |
| PspFI | CCCAGC | 1 cut(s) | 1643 |
| PspGI | CCWGG | 1 cut(s) | 202 |
| PspN4I | GGNNCC | 3 cut(s) | 68, 1371, 1516 |
| PspPI | GGNCC | 2 cut(s) | 67, 1515 |
| PstI | CTGCAG | 2 cut(s) | 61, 472 |
| PstNI | CAGNNNCTG | 3 cut(s) | 151, 599, 1572 |
| PsuI | RGATCY | 1 cut(s) | 862 |
| PvuII | CAGCTG | 1 cut(s) | 383 |
| RsaI | GTAC | 7 cut(s) | 129, 572, 589, 1089, 1263, 1309, 1617 |
| RsaNI | GTAC | 7 cut(s) | 128, 571, 588, 1088, 1262, 1308, 1616 |
| RseI | CAYNNNNRTG | 2 cut(s) | 383, 1407 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| SatI | GCNGC | 4 cut(s) | 57, 78, 468, 1500 |
| Sau3AI | GATC | 1 cut(s) | 862 |
| Sau96I | GGNCC | 2 cut(s) | 67, 1515 |
| ScaI | AGTACT | 1 cut(s) | 1089 |
| SchI | GAGTC | 2 cut(s) | 148, 1345 |
| ScrFI | CCNGG | 1 cut(s) | 204 |
| SduI | GDGCHC | 3 cut(s) | 11, 808, 1258 |
| SfaNI | GCATC | 4 cut(s) | 345, 703, 1347, 1480 |
| SfcI | CTRYAG | 2 cut(s) | 57, 468 |
| SfuI | TTCGAA | 1 cut(s) | 821 |
| SinI | GGWCC | 2 cut(s) | 67, 1515 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 383, 1407 |
| SmlI | CTYRAG | 2 cut(s) | 500, 1591 |
| SmoI | CTYRAG | 2 cut(s) | 500, 1591 |
| SphI | GCATGC | 1 cut(s) | 319 |
| Sse9I | AATT | 8 cut(s) | 72, 207, 771, 1096, 1168, 1227, 1414, 1599 |
| SseBI | AGGCCT | 1 cut(s) | 985 |
| SsiI | CCGC | 2 cut(s) | 35, 1031 |
| SspMI | CTAG | 4 cut(s) | 836, 1128, 1472, 1533 |
| StuI | AGGCCT | 1 cut(s) | 985 |
| StyD4I | CCNGG | 1 cut(s) | 202 |
| StyI | CCWWGG | 3 cut(s) | 38, 230, 898 |
| TaaI | ACNGT | 8 cut(s) | 430, 481, 491, 646, 679, 685, 1087, 1146 |
| TaiI | ACGT | 1 cut(s) | 1263 |
| TaqI | TCGA | 2 cut(s) | 821, 936 |
| TasI | AATT | 8 cut(s) | 72, 207, 771, 1096, 1168, 1227, 1414, 1599 |
| TatI | WGTACW | 3 cut(s) | 570, 587, 1087 |
| TfiI | GAWTC | 6 cut(s) | 506, 517, 544, 608, 815, 923 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TscAI | CASTG | 8 cut(s) | 178, 433, 486, 496, 655, 972, 1309, 1330 |
| TseFI | GTSAC | 2 cut(s) | 173, 679 |
| TseI | GCWGC | 4 cut(s) | 56, 77, 467, 1499 |
| Tsp45I | GTSAC | 2 cut(s) | 173, 679 |
| TspDTI | ATGAA | 4 cut(s) | 899, 1001, 1029, 1414 |
| TspGWI | ACGGA | 3 cut(s) | 115, 765, 1646 |
| TspRI | CASTG | 8 cut(s) | 178, 433, 486, 496, 655, 972, 1309, 1330 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 599 |
| Vha464I | CTTAAG | 1 cut(s) | 500 |
| VneI | GTGCAC | 1 cut(s) | 1254 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 1515 |
| XceI | RCATGY | 3 cut(s) | 319, 623, 1254 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 77 |
| XmiI | GTMKAC | 1 cut(s) | 486 |
| XmnI | GAANNNNTTC | 2 cut(s) | 942, 1209 |
| XspI | CTAG | 4 cut(s) | 836, 1128, 1472, 1533 |
| ZrmI | AGTACT | 1 cut(s) | 1089 |
| Zsp2I | ATGCAT | 1 cut(s) | 338 |