Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002941

Physical Location & Seq

Genomic Coordinates Forward (+)

1653776 .. 1656712

Gene Structure 2937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG024400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGTGACCGTTAACGTTAAAGAAGGCACAAGGCCGCCGTGGGTGGGCTTAGGAGCGGCGGTGTGGGTCCAAATAGCCGCCGGAAACGCCTACAACTTCCCGCTTTACTCGCACTCGCTCAAGTCCGTTCTGGGGTTCAGTCAGCGACAGTTGACCATGCTCGGAGTGGCTAATGATATCGGGGAAAACGTTGGACTTGTTCCTGGGATTGCTTCCAACAAGCTCCCACCTTGGATGATACTTTCGATTGGGGCTTTCGCTTGTTTCTTTGGTTACGGTGTGCTCTGGCTCGCTGTCAGCCGTACAGTTCTGTCCATGCCTTATTGGTTGTTATGGATTGCTCTTTGTGTTGCTACTAATAGTAGTGCTTGGTTTACCACGGCTGTTCTTGTGACCAATATGAGGAACTTCCCTGTTAGTCGTGGGACTGTTGCAGGCATTCTGAAAGGTTATGGGGGTCTCAGTGCAGCTGTGTTTACAGAAGTTTATAGCGTACTGCTTCGTAATTCATCTTCTAAGCTTCTACTCTTCCTTACACTCGGGGTTCCTCTCCTGTGTTTCATTATGATGTATTTAGTTAGGCCTTGTACGCCGGCTACTAGTGAAGGCTCGGTGGAGCGTGGTCACTTTCTCTTCATCCAAGCTGCGAGTGTGGTGGTTGGATTATATGTGCTCACAACTACAATAGTGGATGATTCCTTTTCCTTGAGTGCTCCGATTACCTACAGTTTTGTTGTCATAATGGTAGTACTTCTCATGGCGCCGCTTGCTATCCCTCTAAAAATGACATTTTATCCCACAAGAGTCAGCTCTTCTGATAATTTGAATAATGAGGATAGCAATGCAGATGAAACTGAACCACTGCTGAAGTCATCTTTATCAACAACAAGCCTAGGGAGTTTTCGTGAAGGGAATGATTCTTCGTCTGACATAGCTATGCTTCTTGCTGTGGGTGAGGGGGCAGTGAAGAGAAAGAGAAGACCCAAAAGAGGGGAAGATTTCAAGTTTACTGAAGCTGTGATCAAGGCCGACTTCTGGCTTCTGTTTTTGGTTTATTTTGTAGGGGTTGGTACTGGGGTAACTGTTCTGAATAATTTAGCTCAAATAGGTATTGCACAAGGAACGCATGATACCACGATCTTGTTGTCTCTCTTCAGCTTTGGCAATTTCGTGGGACGTCTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAAGACAAAAACAATTCCGCGGACATTTTGGATGACTTGCACTCAAATTATAATGATCTTTATCTATCTGCTATTTGCTTCTGCTATCAAAGGAACCCTTTATGCTGCGACTGCACTGCTTGGGATCTGCTACGGTGTCCAGTTTTCTATCATGATCCCGACCGTCTCTGAACTCTTTGGATTGAGGCATTTTGGCATATTCTACAATTTCATGTCACTAGGGAATCCTCTAGGCGCATTTCTTTTTTCAGGTCTCCTAGCAGGATACATATACGATAATGAGGCAGCAAAGCAGCATGGTCTTAATCATCTTTATGGAACAAATGTCTCCTGCTTGGGTCCAGATTGCTTTAGGGTTACCTTCCTTGTTCTGGCAGGTGTCTGTGGTGTCGGCACAATCTTGAGCGTTGTTCTGTCTACTAGGATAAAGCCTGTTTATGAAATGCTTTATGCCGGTGGTTCCTTCAGAATACCTCAGAATACAAATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 Nodulin-like

Protein Analysis

567

Amino Acids

61.45

Weight (kDa)

8.93

Isoelectric Point (pI)

26.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nodulin-like	PF06813	13 - 260	2.2e-87	Nodulin-like
NFD4_C	PF23262	342 - 549	1.9e-26	NFD4, C-terminal domain
MFS_1	PF07690	356 - 545	5.4e-10	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80530
fragaria_vesca	FvH4_1g01960 FvH4_6g29100 FvH4_6g29100
malus_domestica	MD00G1182300.v1.1 MD02G1017800.v1.1 MD02G1017900.v1.1 MD17G1217900.v1.1
prunus_persica	Prupe.3G093500_v2.0.a1 Prupe.3G093500_v2.0.a1 Prupe.3G093500_v2.0.a1 Prupe.7G257000_v2.0.a1 Prupe.7G257000_v2.0.a1
pyrus_communis	pycom02g01580 pycom02g01590 pycom16g23280 pycom17g22210
rosa_chinensis	RchiOBHm_Chr2g0086971 RchiOBHm_Chr2g0134291
rosa_laevigata	RLG00000015819 RLG00000019384
rosa_multiflora	Rmu_co8300459.1_g000001 Rmu_co8420697.1_g000001 Rmu_sc0000418.1_g000001 Rmu_sc0000418.1_g000002 Rmu_sc0014586.1_g000007
rosa_roxburghii	Rroxscaffold_2G00110360 Rroxscaffold_2G00153980
rosa_rugosa	Rorug01G0471200 Rorug02G0315800 Rorug02G0315900
rosa_samantha	Rh2AG023900 Rh2AG368600 Rh2BG024400 Rh2CG024600 Rh2DG024500
rosa_wichuraiana	Rw2G001880 Rw2G030030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1262
AarI	CACCTGC	1 cut(s)	1577
AatII	GACGTC	1 cut(s)	1180
Acc36I	ACCTGC	1 cut(s)	1577
AccB1I	GGYRCC	1 cut(s)	760
AccBSI	CCGCTC	1 cut(s)	56
AccI	GTMKAC	1 cut(s)	1628
AccII	CGCG	1 cut(s)	1231
AciI	CCGC	8 cut(s)	35, 56, 59, 78, 101, 764, 1229, 1231
AclI	AACGTT	2 cut(s)	15, 189
AclWI	GGATC	2 cut(s)	1343, 1360
AcuI	CTGAAG	4 cut(s)	887, 1032, 1138, 1660
AcyI	GRCGYC	2 cut(s)	761, 1177
AfaI	GTAC	5 cut(s)	304, 495, 589, 750, 1072
AfiI	CCNNNNNNNGG	7 cut(s)	44, 132, 402, 989, 990, 1035, 1582
AgsI	TTSAA	2 cut(s)	826, 1003
AhlI	ACTAGT	1 cut(s)	599
AjnI	CCWGG	1 cut(s)	202
AluBI	AGCT	9 cut(s)	223, 470, 520, 644, 810, 935, 1016, 1100, 1158
AluI	AGCT	9 cut(s)	223, 470, 520, 644, 810, 935, 1016, 1100, 1158
Alw21I	GWGCWC	3 cut(s)	285, 675, 715
Alw26I	GTCTC	5 cut(s)	464, 1152, 1381, 1469, 1543
AlwI	GGATC	2 cut(s)	1343, 1360
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	3 cut(s)	32, 581, 1026
ApeKI	GCWGC	5 cut(s)	467, 644, 1316, 1496, 1504
AspA2I	CCTAGG	1 cut(s)	892
AspLEI	GCGC	2 cut(s)	763, 1448
AspS9I	GGNCC	2 cut(s)	67, 1550
AsuHPI	GGTGA	2 cut(s)	16, 965
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	2 cut(s)	67, 1550
AvrII	CCTAGG	1 cut(s)	892
BaeI	ACNNNNGTAYC	2 cut(s)	1062, 1095
BanI	GGYRCC	1 cut(s)	760
BarI	GAAGNNNNNNTAC	2 cut(s)	496, 528
BbsI	GAAGAC	1 cut(s)	985
Bbv12I	GWGCWC	3 cut(s)	285, 675, 715
BbvI	GCAGC	5 cut(s)	479, 631, 1303, 1508, 1516
BceAI	ACGGC	3 cut(s)	22, 285, 396
BcgI	CGANNNNNNTGC	2 cut(s)	1309, 1343
BciT130I	CCWGG	1 cut(s)	204
BciVI	GTATCC	1 cut(s)	1469
BclI	TGATCA	1 cut(s)	1020
BcoDI	GTCTC	5 cut(s)	464, 1152, 1381, 1469, 1543
BcuI	ACTAGT	1 cut(s)	599
BfaI	CTAG	6 cut(s)	600, 893, 1430, 1442, 1469, 1632
BfmI	CTRYAG	1 cut(s)	724
BfoI	RGCGCY	1 cut(s)	764
BfuAI	ACCTGC	1 cut(s)	1577
BfuI	GTATCC	1 cut(s)	1469
BisI	GCNGC	9 cut(s)	35, 57, 78, 468, 645, 764, 1317, 1497, 1505
BlnI	CCTAGG	1 cut(s)	892
BlsI	GCNGC	9 cut(s)	36, 58, 79, 469, 646, 765, 1318, 1498, 1506
BmcAI	AGTACT	1 cut(s)	750
Bme1390I	CCNGG	1 cut(s)	204
Bme18I	GGWCC	2 cut(s)	67, 1550
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	2 cut(s)	67, 1550
BmiI	GGNNCC	6 cut(s)	68, 546, 762, 1306, 1551, 1672
BmrFI	CCNGG	1 cut(s)	204
BmrI	ACTGGG	1 cut(s)	1083
BmuI	ACTGGG	1 cut(s)	1083
BpiI	GAAGAC	1 cut(s)	985
Bpu10I	CCTNAGC	1 cut(s)	49
BpuEI	CTTGAG	3 cut(s)	104, 727, 1633
BsaBI	GATNNNNATC	1 cut(s)	1271
BsaHI	GRCGYC	2 cut(s)	761, 1177
BsaI	GGTCTC	2 cut(s)	464, 1469
BsaJI	CCNNGG	6 cut(s)	38, 203, 230, 378, 892, 1229
BsaXI	ACNNNNNCTCC	6 cut(s)	45, 75, 889, 919, 1179, 1209
Bsc4I	CCNNNNNNNGG	7 cut(s)	44, 132, 402, 989, 990, 1035, 1582
Bse118I	RCCGGY	2 cut(s)	592, 1664
Bse1I	ACTGG	2 cut(s)	1078, 1351
Bse3DI	GCAATG	1 cut(s)	847
Bse8I	GATNNNNATC	1 cut(s)	1271
BseBI	CCWGG	1 cut(s)	204
BseDI	CCNNGG	6 cut(s)	38, 203, 230, 378, 892, 1229
BseGI	GGATG	4 cut(s)	240, 636, 697, 1248
BseJI	GATNNNNATC	1 cut(s)	1271
BseLI	CCNNNNNNNGG	7 cut(s)	44, 132, 402, 989, 990, 1035, 1582
BseMI	GCAATG	1 cut(s)	847
BseMII	CTCAG	2 cut(s)	475, 1700
BseNI	ACTGG	2 cut(s)	1078, 1351
BseRI	GAGGAG	1 cut(s)	1203
BseXI	GCAGC	5 cut(s)	479, 631, 1303, 1508, 1516
BsgI	GTGCAG	2 cut(s)	486, 1308
Bsh1236I	CGCG	1 cut(s)	1231
Bsh1285I	CGRYCG	1 cut(s)	1374
BshFI	GGCC	3 cut(s)	34, 583, 1028
BshNI	GGYRCC	1 cut(s)	760
BsiEI	CGRYCG	1 cut(s)	1374
BsiHKAI	GWGCWC	3 cut(s)	285, 675, 715
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	3 cut(s)	81, 593, 1665
BslFI	GGGAC	2 cut(s)	439, 1188
BslI	CCNNNNNNNGG	7 cut(s)	44, 132, 402, 989, 990, 1035, 1582
BsmAI	GTCTC	5 cut(s)	464, 1152, 1381, 1469, 1543
BsmBI	CGTCTC	1 cut(s)	1381
BsmFI	GGGAC	2 cut(s)	439, 1188
BsmI	GAATGC	1 cut(s)	438
BsnI	GGCC	3 cut(s)	34, 583, 1028
Bso31I	GGTCTC	2 cut(s)	464, 1469
BsoBI	CYCGRG	1 cut(s)	539
Bsp1286I	GDGCHC	3 cut(s)	285, 675, 715
Bsp143I	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
BspACI	CCGC	8 cut(s)	35, 56, 59, 78, 101, 764, 1229, 1231
BspANI	GGCC	3 cut(s)	34, 583, 1028
BspCNI	CTCAG	2 cut(s)	474, 1699
BspFNI	CGCG	1 cut(s)	1231
BspHI	TCATGA	1 cut(s)	1362
BspLI	GGNNCC	6 cut(s)	68, 546, 762, 1306, 1551, 1672
BspMI	ACCTGC	1 cut(s)	1577
BspPI	GGATC	2 cut(s)	1343, 1360
BspQI	GCTCTTC	1 cut(s)	817
BspT107I	GGYRCC	1 cut(s)	760
BspTNI	GGTCTC	2 cut(s)	464, 1469
BsrBI	CCGCTC	1 cut(s)	56
BsrDI	GCAATG	1 cut(s)	847
BsrFI	RCCGGY	2 cut(s)	592, 1664
BsrI	ACTGG	2 cut(s)	1078, 1351
BssAI	RCCGGY	2 cut(s)	592, 1664
BssECI	CCNNGG	6 cut(s)	38, 203, 230, 378, 892, 1229
BssMI	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
BssNI	GRCGYC	2 cut(s)	761, 1177
BssT1I	CCWWGG	2 cut(s)	230, 892
Bst2UI	CCWGG	1 cut(s)	204
Bst4CI	ACNGT	9 cut(s)	10, 150, 278, 307, 430, 728, 1084, 1346, 1375
Bst6I	CTCTTC	5 cut(s)	533, 638, 817, 962, 1157
BstACI	GRCGYC	2 cut(s)	761, 1177
BstC8I	GCNNGC	4 cut(s)	291, 436, 594, 768
BstDEI	CTNAG	4 cut(s)	49, 461, 516, 1686
BstDSI	CCRYGG	3 cut(s)	38, 378, 1229
BstEII	GGTNACC	2 cut(s)	4, 1567
BstF5I	GGATG	4 cut(s)	240, 636, 697, 1248
BstFNI	CGCG	1 cut(s)	1231
BstH2I	RGCGCY	1 cut(s)	764
BstHHI	GCGC	2 cut(s)	763, 1448
BstKTI	GATC	5 cut(s)	1023, 1140, 1269, 1338, 1368
BstMAI	GTCTC	5 cut(s)	464, 1152, 1381, 1469, 1543
BstMBI	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
BstMCI	CGRYCG	1 cut(s)	1374
BstMWI	GCNNNNNNNGC	5 cut(s)	86, 109, 589, 767, 1322
BstNI	CCWGG	1 cut(s)	204
BstPI	GGTNACC	2 cut(s)	4, 1567
BstSCI	CCNGG	1 cut(s)	202
BstSFI	CTRYAG	1 cut(s)	724
BstUI	CGCG	1 cut(s)	1231
BstV1I	GCAGC	5 cut(s)	479, 631, 1303, 1508, 1516
BstV2I	GAAGAC	1 cut(s)	985
BstX2I	RGATCY	1 cut(s)	1335
BstYI	RGATCY	1 cut(s)	1335
BsuI	GTATCC	1 cut(s)	1469
BsuRI	GGCC	3 cut(s)	34, 583, 1028
BtgI	CCRYGG	3 cut(s)	38, 378, 1229
BtsCI	GGATG	4 cut(s)	240, 636, 697, 1248
BtsI	GCAGTG	3 cut(s)	860, 969, 1325
BtsIMutI	CAGTG	4 cut(s)	469, 860, 969, 1325
BveI	ACCTGC	1 cut(s)	1577
Cac8I	GCNNGC	4 cut(s)	291, 436, 594, 768
CciI	TCATGA	1 cut(s)	1362
CfoI	GCGC	2 cut(s)	763, 1448
Cfr10I	RCCGGY	2 cut(s)	592, 1664
Cfr13I	GGNCC	2 cut(s)	67, 1550
Cfr42I	CCGCGG	1 cut(s)	1232
Csp6I	GTAC	5 cut(s)	303, 494, 588, 749, 1071
CviAII	CATG	7 cut(s)	157, 316, 757, 1127, 1363, 1423, 1508
CviQI	GTAC	5 cut(s)	303, 494, 588, 749, 1071
DdeI	CTNAG	4 cut(s)	49, 461, 516, 1686
DinI	GGCGCC	1 cut(s)	762
DpnI	GATC	5 cut(s)	1022, 1139, 1268, 1337, 1367
DpnII	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
Eam1104I	CTCTTC	5 cut(s)	533, 638, 817, 962, 1157
EarI	CTCTTC	5 cut(s)	533, 638, 817, 962, 1157
Eco130I	CCWWGG	2 cut(s)	230, 892
Eco147I	AGGCCT	1 cut(s)	583
Eco31I	GGTCTC	2 cut(s)	464, 1469
Eco32I	GATATC	1 cut(s)	178
Eco47I	GGWCC	2 cut(s)	67, 1550
Eco57I	CTGAAG	4 cut(s)	887, 1032, 1138, 1660
Eco88I	CYCGRG	1 cut(s)	539
Eco91I	GGTNACC	2 cut(s)	4, 1567
EcoO65I	GGTNACC	2 cut(s)	4, 1567
EcoRII	CCWGG	1 cut(s)	202
EcoRV	GATATC	1 cut(s)	178
EcoT14I	CCWWGG	2 cut(s)	230, 892
EgeI	GGCGCC	1 cut(s)	762
EheI	GGCGCC	1 cut(s)	762
ErhI	CCWWGG	2 cut(s)	230, 892
Esp3I	CGTCTC	1 cut(s)	1381
FaeI	CATG	7 cut(s)	160, 319, 760, 1130, 1366, 1426, 1511
FalI	AAGNNNNNCTT	4 cut(s)	1016, 1048, 1293, 1325
FaqI	GGGAC	2 cut(s)	439, 1188
FatI	CATG	7 cut(s)	156, 315, 756, 1126, 1362, 1422, 1507
FauI	CCCGC	1 cut(s)	108
FbaI	TGATCA	1 cut(s)	1020
FblI	GTMKAC	1 cut(s)	1628
Fnu4HI	GCNGC	9 cut(s)	35, 57, 78, 468, 645, 764, 1317, 1497, 1505
FokI	GGATG	4 cut(s)	247, 623, 704, 1255
Fsp4HI	GCNGC	9 cut(s)	35, 57, 78, 468, 645, 764, 1317, 1497, 1505
FspBI	CTAG	6 cut(s)	600, 893, 1430, 1442, 1469, 1632
GlaI	GCGC	2 cut(s)	762, 1447
GluI	GCNGC	9 cut(s)	35, 57, 78, 468, 645, 764, 1317, 1497, 1505
HaeII	RGCGCY	1 cut(s)	764
HaeIII	GGCC	3 cut(s)	34, 583, 1028
HapII	CCGG	3 cut(s)	81, 593, 1665
HhaI	GCGC	2 cut(s)	763, 1448
Hin1I	GRCGYC	2 cut(s)	761, 1177
Hin1II	CATG	7 cut(s)	160, 319, 760, 1130, 1366, 1426, 1511
Hin6I	GCGC	2 cut(s)	761, 1446
HinP1I	GCGC	2 cut(s)	761, 1446
HincII	GTYRAC	2 cut(s)	13, 153
HindII	GTYRAC	2 cut(s)	13, 153
HindIII	AAGCTT	1 cut(s)	518
HinfI	GANTC	4 cut(s)	695, 804, 917, 1435
HpaI	GTTAAC	1 cut(s)	13
HpaII	CCGG	3 cut(s)	81, 593, 1665
HphI	GGTGA	2 cut(s)	16, 965
Hpy166II	GTNNAC	6 cut(s)	13, 153, 375, 477, 1008, 1629
Hpy188III	TCNNGA	6 cut(s)	905, 1213, 1363, 1369, 1553, 1612
Hpy8I	GTNNAC	6 cut(s)	13, 153, 375, 477, 1008, 1629
HpyAV	CCTTC	5 cut(s)	17, 599, 902, 1582, 1684
HpyCH4III	ACNGT	9 cut(s)	10, 150, 278, 307, 430, 728, 1084, 1346, 1375
HpyCH4IV	ACGT	3 cut(s)	15, 189, 1177
HpyCH4V	TGCA	6 cut(s)	434, 467, 845, 1115, 1251, 1325
HpyF10VI	GCNNNNNNNGC	5 cut(s)	86, 109, 589, 767, 1322
HpyF3I	CTNAG	4 cut(s)	49, 461, 516, 1686
HpySE526I	ACGT	3 cut(s)	15, 189, 1177
Hsp92I	GRCGYC	2 cut(s)	761, 1177
Hsp92II	CATG	7 cut(s)	160, 319, 760, 1130, 1366, 1426, 1511
HspAI	GCGC	2 cut(s)	761, 1446
KasI	GGCGCC	1 cut(s)	760
KroI	GCCGGC	1 cut(s)	592
KroNI	GCCGGC	1 cut(s)	594
Ksp22I	TGATCA	1 cut(s)	1020
KspAI	GTTAAC	1 cut(s)	13
KspI	CCGCGG	1 cut(s)	1232
Kzo9I	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
LguI	GCTCTTC	1 cut(s)	817
LmnI	GCTCC	4 cut(s)	53, 228, 616, 718
Lsp1109I	GCAGC	5 cut(s)	479, 631, 1303, 1508, 1516
MaeI	CTAG	6 cut(s)	600, 893, 1430, 1442, 1469, 1632
MaeII	ACGT	3 cut(s)	15, 189, 1177
MaeIII	GTNAC	7 cut(s)	4, 272, 391, 623, 1078, 1425, 1567
MalI	GATC	5 cut(s)	1022, 1139, 1268, 1337, 1367
MbiI	CCGCTC	1 cut(s)	56
MboI	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
MboII	GAAGA	9 cut(s)	504, 520, 625, 804, 912, 979, 990, 1007, 1144
MflI	RGATCY	1 cut(s)	1335
MhlI	GDGCHC	3 cut(s)	285, 675, 715
MluCI	AATT	7 cut(s)	505, 820, 1093, 1165, 1224, 1257, 1417
Mly113I	GGCGCC	1 cut(s)	761
MlyI	GAGTC	1 cut(s)	813
MmeI	TCCRAC	3 cut(s)	172, 240, 640
MroNI	GCCGGC	1 cut(s)	592
MseI	TTAA	3 cut(s)	12, 18, 1515
MslI	CAYNNNNRTG	3 cut(s)	566, 935, 1524
MspA1I	CMGCKG	2 cut(s)	470, 1231
MspI	CCGG	3 cut(s)	81, 593, 1665
MspR9I	CCNGG	1 cut(s)	204
Mva1269I	GAATGC	1 cut(s)	438
MvaI	CCWGG	1 cut(s)	204
MvnI	CGCG	1 cut(s)	1231
MwoI	GCNNNNNNNGC	5 cut(s)	86, 109, 589, 767, 1322
NaeI	GCCGGC	1 cut(s)	594
NarI	GGCGCC	1 cut(s)	761
NdeII	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
NgoMIV	GCCGGC	1 cut(s)	592
NlaIII	CATG	7 cut(s)	160, 319, 760, 1130, 1366, 1426, 1511
NlaIV	GGNNCC	6 cut(s)	68, 546, 762, 1306, 1551, 1672
NmuCI	GTSAC	4 cut(s)	4, 391, 623, 1425
PagI	TCATGA	1 cut(s)	1362
PaqCI	CACCTGC	1 cut(s)	1577
PceI	AGGCCT	1 cut(s)	583
PciSI	GCTCTTC	1 cut(s)	817
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	1 cut(s)	438
PdiI	GCCGGC	1 cut(s)	594
PfeI	GAWTC	3 cut(s)	695, 917, 1435
PkrI	GCNGC	9 cut(s)	36, 58, 79, 469, 646, 765, 1318, 1498, 1506
PleI	GAGTC	1 cut(s)	812
PluTI	GGCGCC	1 cut(s)	764
PpsI	GAGTC	1 cut(s)	812
PsiI	TTATAA	1 cut(s)	1262
Psp1406I	AACGTT	2 cut(s)	15, 189
Psp6I	CCWGG	1 cut(s)	202
PspEI	GGTNACC	2 cut(s)	4, 1567
PspGI	CCWGG	1 cut(s)	202
PspN4I	GGNNCC	6 cut(s)	68, 546, 762, 1306, 1551, 1672
PspPI	GGNCC	2 cut(s)	67, 1550
PsrI	GAACNNNNNNTAC	2 cut(s)	1114, 1146
PsuI	RGATCY	1 cut(s)	1335
PvuII	CAGCTG	1 cut(s)	470
RsaI	GTAC	5 cut(s)	304, 495, 589, 750, 1072
RsaNI	GTAC	5 cut(s)	303, 494, 588, 749, 1071
RseI	CAYNNNNRTG	3 cut(s)	566, 935, 1524
SacII	CCGCGG	1 cut(s)	1232
SapI	GCTCTTC	1 cut(s)	817
SaqAI	TTAA	3 cut(s)	12, 18, 1515
SatI	GCNGC	9 cut(s)	35, 57, 78, 468, 645, 764, 1317, 1497, 1505
Sau3AI	GATC	5 cut(s)	1020, 1137, 1266, 1335, 1365
Sau96I	GGNCC	2 cut(s)	67, 1550
ScaI	AGTACT	1 cut(s)	750
SchI	GAGTC	1 cut(s)	813
ScrFI	CCNGG	1 cut(s)	204
SduI	GDGCHC	3 cut(s)	285, 675, 715
SfcI	CTRYAG	1 cut(s)	724
SfoI	GGCGCC	1 cut(s)	762
Sfr303I	CCGCGG	1 cut(s)	1232
SgrBI	CCGCGG	1 cut(s)	1232
SinI	GGWCC	2 cut(s)	67, 1550
SmiMI	CAYNNNNRTG	3 cut(s)	566, 935, 1524
SmlI	CTYRAG	3 cut(s)	119, 706, 1612
SmoI	CTYRAG	3 cut(s)	119, 706, 1612
SpeI	ACTAGT	1 cut(s)	599
Sse9I	AATT	7 cut(s)	505, 820, 1093, 1165, 1224, 1257, 1417
SseBI	AGGCCT	1 cut(s)	583
SsiI	CCGC	8 cut(s)	35, 56, 59, 78, 101, 764, 1229, 1231
SspDI	GGCGCC	1 cut(s)	760
SspMI	CTAG	6 cut(s)	600, 893, 1430, 1442, 1469, 1632
StuI	AGGCCT	1 cut(s)	583
StyD4I	CCNGG	1 cut(s)	202
StyI	CCWWGG	2 cut(s)	230, 892
TaaI	ACNGT	9 cut(s)	10, 150, 278, 307, 430, 728, 1084, 1346, 1375
TaiI	ACGT	3 cut(s)	18, 192, 1180
TaqI	TCGA	1 cut(s)	245
TasI	AATT	7 cut(s)	505, 820, 1093, 1165, 1224, 1257, 1417
TatI	WGTACW	1 cut(s)	748
TauI	GCSGC	4 cut(s)	37, 59, 80, 766
TfiI	GAWTC	3 cut(s)	695, 917, 1435
Tru1I	TTAA	3 cut(s)	12, 18, 1515
Tru9I	TTAA	3 cut(s)	12, 18, 1515
TscAI	CASTG	4 cut(s)	469, 867, 969, 1332
TseFI	GTSAC	4 cut(s)	4, 391, 623, 1425
TseI	GCWGC	5 cut(s)	467, 644, 1316, 1496, 1504
Tsp45I	GTSAC	4 cut(s)	4, 391, 623, 1425
TspDTI	ATGAA	6 cut(s)	498, 550, 625, 864, 1411, 1665
TspGWI	ACGGA	1 cut(s)	115
TspRI	CASTG	4 cut(s)	469, 867, 969, 1332
VpaK11BI	GGWCC	2 cut(s)	67, 1550
XcmI	CCANNNNNNNNNTGG	1 cut(s)	163
XmaJI	CCTAGG	1 cut(s)	892
XmiI	GTMKAC	1 cut(s)	1628
XspI	CTAG	6 cut(s)	600, 893, 1430, 1442, 1469, 1632
ZraI	GACGTC	1 cut(s)	1178
ZrmI	AGTACT	1 cut(s)	750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.