Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0014482

Physical Location & Seq

Genomic Coordinates Forward (+)

24362310 .. 24364335

Gene Structure 2026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G254800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 501 bp

ATGCTGAAATTTGGAGGCAAAATTGCTCCAATGGAAGGAGCTTTGAAGAAACAGTTATTCCATTTCCATGGTGGAGTTGTGTCTTTTAACTGCAAACAAGCAACAAAGCACCATATTCGAACTCCATCGATTCACCTGATGTCGTCGACAGGCATAACTGAGAACATGAGTTCTTCAGTCCATCTGAAACTGTTTAAAACAAGAAGTGAACAAAGAGATGCTGTCAAGGTTTGTGCAGTGAGGAGGAGAAGGATATATCACAATAGTGAAACTTATGTATTGCTGGAACCAGGAGAGGATGAGAAGTTTGTTTCAGAGGAAGAGTTGAGGGCTAAGTTAAAAGGTCGGCTGGAAAACTGGCCAGCCAAGAACCTTCCCCCTGATCTTGCAAGATTTGAAAGCATTGATGATGCTGTTTCCTATCTAGTGAGGTCTGTTTGTGAACTTGAAATCCATGGAGATGTTGGCTCAGTCCAATGGTACGAAGTTCGATTGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010275 GO:0016020 GO:0016043 GO:0022607 GO:0034622 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRR7

Protein Analysis

167

Amino Acids

18.99

Weight (kDa)

8.76

Isoelectric Point (pI)

53.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014482)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39210
fragaria_vesca	FvH4_6g46840
malus_domestica	MD09G1066900.v1.1
prunus_persica	Prupe.3G254800_v2.0.a1
pyrus_communis	pycom111g05620 pycom17g05950
rosa_chinensis	RchiOBHm_Chr2g0165831
rosa_laevigata	RLG00000021560
rosa_multiflora	Rmu_sc0003227.1_g000001 Rmu_sc0008709.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085460
rosa_rugosa	Rorug02G0518200
rosa_samantha	Rh2AG584000 Rh2BG595900 Rh2CG566900 Rh2DG605700
rosa_wichuraiana	Rw2G048690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	146
AcoI	YGGCCR	1 cut(s)	359
AcsI	RAATTY	1 cut(s)	8
AcuI	CTGAAG	1 cut(s)	159
AfaI	GTAC	1 cut(s)	482
AfiI	CCNNNNNNNGG	1 cut(s)	35
AgsI	TTSAA	3 cut(s)	46, 398, 449
AjnI	CCWGG	1 cut(s)	289
AleI	CACNNNNGTG	1 cut(s)	264
AloI	GAACNNNNNNTCC	2 cut(s)	435, 467
AluBI	AGCT	1 cut(s)	41
AluI	AGCT	1 cut(s)	41
AoxI	GGCC	1 cut(s)	359
ApoI	RAATTY	1 cut(s)	8
AsuHPI	GGTGA	1 cut(s)	125
AsuII	TTCGAA	1 cut(s)	118
BalI	TGGCCA	1 cut(s)	361
BccI	CCATC	2 cut(s)	133, 189
BcgI	CGANNNNNNTGC	2 cut(s)	98, 132
BciT130I	CCWGG	1 cut(s)	291
BfaI	CTAG	1 cut(s)	425
Bme1390I	CCNGG	1 cut(s)	291
BmiI	GGNNCC	1 cut(s)	288
BmrFI	CCNGG	1 cut(s)	291
BmsI	GCATC	2 cut(s)	208, 400
Bpu14I	TTCGAA	1 cut(s)	118
Bsa29I	ATCGAT	1 cut(s)	128
BsaJI	CCNNGG	2 cut(s)	67, 454
Bsc4I	CCNNNNNNNGG	1 cut(s)	35
Bse1I	ACTGG	1 cut(s)	362
BseBI	CCWGG	1 cut(s)	291
BseCI	ATCGAT	1 cut(s)	128
BseDI	CCNNGG	2 cut(s)	67, 454
BseGI	GGATG	1 cut(s)	304
BseLI	CCNNNNNNNGG	1 cut(s)	35
BseMII	CTCAG	2 cut(s)	150, 483
BseNI	ACTGG	1 cut(s)	362
BseRI	GAGGAG	2 cut(s)	256, 259
BsgI	GTGCAG	1 cut(s)	255
BshFI	GGCC	1 cut(s)	361
BshVI	ATCGAT	1 cut(s)	128
BslI	CCNNNNNNNGG	1 cut(s)	35
BsnI	GGCC	1 cut(s)	361
Bsp119I	TTCGAA	1 cut(s)	118
Bsp143I	GATC	1 cut(s)	382
Bsp19I	CCATGG	2 cut(s)	67, 454
BspANI	GGCC	1 cut(s)	361
BspCNI	CTCAG	2 cut(s)	151, 482
BspDI	ATCGAT	1 cut(s)	128
BspLI	GGNNCC	1 cut(s)	288
BspT104I	TTCGAA	1 cut(s)	118
BsrI	ACTGG	1 cut(s)	362
BssECI	CCNNGG	2 cut(s)	67, 454
BssMI	GATC	1 cut(s)	382
BssT1I	CCWWGG	2 cut(s)	67, 454
Bst2UI	CCWGG	1 cut(s)	291
Bst4CI	ACNGT	2 cut(s)	54, 192
Bst6I	CTCTTC	1 cut(s)	315
BstBI	TTCGAA	1 cut(s)	118
BstC8I	GCNNGC	1 cut(s)	363
BstDEI	CTNAG	3 cut(s)	159, 333, 469
BstDSI	CCRYGG	2 cut(s)	67, 454
BstF5I	GGATG	1 cut(s)	304
BstKTI	GATC	1 cut(s)	385
BstMBI	GATC	1 cut(s)	382
BstNI	CCWGG	1 cut(s)	291
BstSCI	CCNGG	1 cut(s)	289
BstXI	CCANNNNNNTGG	1 cut(s)	68
Bsu15I	ATCGAT	1 cut(s)	128
BsuRI	GGCC	1 cut(s)	361
BsuTUI	ATCGAT	1 cut(s)	128
BtgI	CCRYGG	2 cut(s)	67, 454
BtsCI	GGATG	1 cut(s)	304
BtsI	GCAGTG	1 cut(s)	243
BtsIMutI	CAGTG	1 cut(s)	243
Cac8I	GCNNGC	1 cut(s)	363
ClaI	ATCGAT	1 cut(s)	128
Csp6I	GTAC	1 cut(s)	481
CviAII	CATG	3 cut(s)	68, 166, 455
CviJI	RGCY	6 cut(s)	41, 332, 349, 361, 365, 468
CviKI_1	RGCY	6 cut(s)	41, 332, 349, 361, 365, 468
CviQI	GTAC	1 cut(s)	481
DdeI	CTNAG	3 cut(s)	159, 333, 469
DpnI	GATC	1 cut(s)	384
DpnII	GATC	1 cut(s)	382
DraI	TTTAAA	1 cut(s)	196
EaeI	YGGCCR	1 cut(s)	359
Eam1104I	CTCTTC	1 cut(s)	315
EarI	CTCTTC	1 cut(s)	315
Eco130I	CCWWGG	2 cut(s)	67, 454
Eco57I	CTGAAG	1 cut(s)	159
EcoRII	CCWGG	1 cut(s)	289
EcoT14I	CCWWGG	2 cut(s)	67, 454
ErhI	CCWWGG	2 cut(s)	67, 454
FaeI	CATG	3 cut(s)	71, 169, 458
FaiI	YATR	7 cut(s)	69, 114, 155, 167, 256, 276, 456
FatI	CATG	3 cut(s)	67, 165, 454
FblI	GTMKAC	1 cut(s)	146
FokI	GGATG	1 cut(s)	311
FspBI	CTAG	1 cut(s)	425
HaeIII	GGCC	1 cut(s)	361
Hin1II	CATG	3 cut(s)	71, 169, 458
HincII	GTYRAC	1 cut(s)	147
HindII	GTYRAC	1 cut(s)	147
HinfI	GANTC	1 cut(s)	130
HphI	GGTGA	1 cut(s)	125
Hpy166II	GTNNAC	3 cut(s)	147, 209, 443
Hpy188I	TCNGA	2 cut(s)	186, 316
Hpy8I	GTNNAC	3 cut(s)	147, 209, 443
Hpy99I	CGWCG	1 cut(s)	148
HpyAV	CCTTC	3 cut(s)	29, 243, 383
HpyCH4III	ACNGT	2 cut(s)	54, 192
HpyCH4V	TGCA	3 cut(s)	93, 236, 389
HpyF3I	CTNAG	3 cut(s)	159, 333, 469
Hsp92II	CATG	3 cut(s)	71, 169, 458
Kzo9I	GATC	1 cut(s)	382
LmnI	GCTCC	2 cut(s)	31, 38
LpnPI	CCDG	9 cut(s)	135, 149, 269, 276, 303, 335, 343, 375, 393
LweI	GCATC	2 cut(s)	208, 400
MaeI	CTAG	1 cut(s)	425
MalI	GATC	1 cut(s)	384
MboI	GATC	1 cut(s)	382
MboII	GAAGA	3 cut(s)	58, 165, 332
MlsI	TGGCCA	1 cut(s)	361
MluCI	AATT	2 cut(s)	8, 21
MluNI	TGGCCA	1 cut(s)	361
MnlI	CCTC	7 cut(s)	8, 234, 237, 289, 310, 321, 423
Mox20I	TGGCCA	1 cut(s)	361
MscI	TGGCCA	1 cut(s)	361
MseI	TTAA	3 cut(s)	87, 195, 338
MslI	CAYNNNNRTG	3 cut(s)	66, 264, 459
Msp20I	TGGCCA	1 cut(s)	361
MspR9I	CCNGG	1 cut(s)	291
MvaI	CCWGG	1 cut(s)	291
NcoI	CCATGG	2 cut(s)	67, 454
NdeII	GATC	1 cut(s)	382
NlaIII	CATG	3 cut(s)	71, 169, 458
NlaIV	GGNNCC	1 cut(s)	288
NspV	TTCGAA	1 cut(s)	118
OliI	CACNNNNGTG	1 cut(s)	264
PfeI	GAWTC	1 cut(s)	130
Psp6I	CCWGG	1 cut(s)	289
PspGI	CCWGG	1 cut(s)	289
PspN4I	GGNNCC	1 cut(s)	288
RsaI	GTAC	1 cut(s)	482
RsaNI	GTAC	1 cut(s)	481
RseI	CAYNNNNRTG	3 cut(s)	66, 264, 459
SalI	GTCGAC	1 cut(s)	145
SaqAI	TTAA	3 cut(s)	87, 195, 338
Sau3AI	GATC	1 cut(s)	382
ScrFI	CCNGG	1 cut(s)	291
SetI	ASST	6 cut(s)	43, 138, 231, 346, 375, 434
SfaNI	GCATC	2 cut(s)	208, 400
SfuI	TTCGAA	1 cut(s)	118
SmiMI	CAYNNNNRTG	3 cut(s)	66, 264, 459
Sse9I	AATT	2 cut(s)	8, 21
SspMI	CTAG	1 cut(s)	425
StyD4I	CCNGG	1 cut(s)	289
StyI	CCWWGG	2 cut(s)	67, 454
TaaI	ACNGT	2 cut(s)	54, 192
TaqI	TCGA	4 cut(s)	118, 128, 146, 490
TasI	AATT	2 cut(s)	8, 21
TfiI	GAWTC	1 cut(s)	130
Tru1I	TTAA	3 cut(s)	87, 195, 338
Tru9I	TTAA	3 cut(s)	87, 195, 338
TscAI	CASTG	1 cut(s)	243
TspRI	CASTG	1 cut(s)	243
XapI	RAATTY	1 cut(s)	8
XcmI	CCANNNNNNNNNTGG	2 cut(s)	68, 461
XmiI	GTMKAC	1 cut(s)	146
XspI	CTAG	1 cut(s)	425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.