Prupe.3G260100_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
24647703 .. 24649298
1596 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G260100.1

Sequence Viewer

Length: 1305 bp
ATGTCAAAAACCACAGCTTCTCCTCCTCACATAGCTCTGTTGCCAAGTGCTGGGATGGGTCATTTGACCCCCTTCCTCCGCCTTGCTTCCATGCTCTCCTCCAGAAGTTGTACCGTCACCTTGATCACTGCCTCCCCTTCTGTTTCTGCTGCAGAGTCTTCTCATGTTTCTTTCTTTTTATCTCAGCATCCACTGGTCAAGCACATTGAGTTTCAAGTCATTCCCTCCAAGCCCTCCTCCAATCCCACCACTGACGACCCTTTCTTCCTCCAGTTTGAAGCCACCAACCGCTCTGTCCATCTTCTTTACCCTTCCCTTGCCTCTGCGTCTCCACCAATCTCAGCCATCTTTTCTGACTTTGCAGTGGCTTCCAGTATTGCTCCTGTTGCTGCTGATCTTGGTATCCCCAATTACATCATCTCCACCACCTCTTGTAAGTTTTTCTGTCTCATGGCCTACCTTCCAGTCCTTCTATCCGACCCTTCGAGTTTTAGCAGCGGCCTCAGTGAAGTCAACATCCCAGGCATCACCCCATTTCCCCTACCAAGCATTCCTCCTCCATTCAAGAACCCAAGTCATCTTTTGACATCACTAATTGCTACAGATGCTCAAGCTCTCTCTAAGGCCAAAGGGATTCTAATGAACACTTTCGATGATTTTGAACGGGAAACTCTAGCTCCTATCAAAAGTGGCAGAGTTTTAGACAATCTCCCACCAATCCTCCCCATTGGACCATTAGAAACTTATGAGCCCAAGAAAGAGCAGGACCAGTCCTATCTGCCATGGCTAGACAGCCAACCAGCAGAGTCTGTAGTTTATGTGAGCTTTGGAAGCAGAACAGCCCTGTCCAGTGCTCAGATAAGAGAGCTGTCGAAAGGGTTGGAGAGAAGTGGATATAGATTTTTGTGGGTACCTAAAACAAGCAAAGTTGATAAAGATGATAAAGAGGAGTTGAAAGATCTTCTGGAGGAGTCATTTTTGGACAGAACAAAGAACAAGGGAAGAGTAGTGAAGGGGTGGGTGAGCCAGCAAGACATTCTTGAACACCCTGCCATTGGCGGATTTATCAGTCACTGCGGGTGGAATTCAGTCATGGAAGCAGTCCGGAAGGGCATACCGATGCTGGCATGGCCGCAACACATGGATCAAAGTGTGAATGCAGAGGTTGTGGAGAAGGCAGGGCTGGGAATATGGGAGAGGAAATGGGGTTGGGGTCTTGAAGGGTTGGTGAGTGGTGAGGAGATAGGGAAAAAGATTGTGGAGCTAATGGAAGATGAGAAGCTGAGGGTTTGGCCAGGAAGGTAG

Protein Analysis

435

Amino Acids

47.55

Weight (kDa)

5.97

Isoelectric Point (pI)

50.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 910
AccB1I GGYRCC 1 cut(s) 910
AccB7I CCANNNNNTGG 1 cut(s) 50
AccBSI CCGCTC 1 cut(s) 291
AccIII TCCGGA 1 cut(s) 1104
AciI CCGC 6 cut(s) 79, 289, 498, 1059, 1077, 1133
AclWI GGATC 1 cut(s) 1152
AcoI YGGCCR 2 cut(s) 1130, 1292
AcsI RAATTY 1 cut(s) 1084
AfaI GTAC 2 cut(s) 112, 912
AfiI CCNNNNNNNGG 2 cut(s) 50, 1055
AgsI TTSAA 7 cut(s) 215, 278, 565, 662, 955, 1043, 1220
AjnI CCWGG 2 cut(s) 520, 1294
AluBI AGCT 8 cut(s) 17, 35, 614, 677, 825, 868, 1264, 1282
AluI AGCT 8 cut(s) 17, 35, 614, 677, 825, 868, 1264, 1282
Alw21I GWGCWC 1 cut(s) 856
Alw26I GTCTC 2 cut(s) 333, 452
AlwI GGATC 1 cut(s) 1152
AlwNI CAGNNNCTG 2 cut(s) 809, 1074
Aor13HI TCCGGA 1 cut(s) 1104
AoxI GGCC 5 cut(s) 453, 499, 624, 1130, 1292
ApeKI GCWGC 3 cut(s) 149, 389, 495
ApoI RAATTY 1 cut(s) 1084
Asp700I GAANNNNTTC 1 cut(s) 647
Asp718I GGTACC 1 cut(s) 910
AspS9I GGNCC 2 cut(s) 731, 766
AsuHPI GGTGA 5 cut(s) 109, 520, 1033, 1240, 1247
AvaII GGWCC 2 cut(s) 731, 766
BalI TGGCCA 1 cut(s) 1294
BanI GGYRCC 1 cut(s) 910
BanII GRGCYC 1 cut(s) 753
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 856
BbvCI CCTCAGC 1 cut(s) 1283
BbvI GCAGC 3 cut(s) 136, 376, 507
BccI CCATC 3 cut(s) 49, 306, 353
BciT130I CCWGG 2 cut(s) 522, 1296
BciVI GTATCC 1 cut(s) 413
BclI TGATCA 1 cut(s) 123
BcoDI GTCTC 2 cut(s) 333, 452
BfaI CTAG 2 cut(s) 674, 788
BfmI CTRYAG 3 cut(s) 150, 600, 810
BfuI GTATCC 1 cut(s) 413
BglII AGATCT 1 cut(s) 958
BisI GCNGC 5 cut(s) 150, 390, 496, 499, 1133
BlsI GCNGC 5 cut(s) 151, 391, 497, 500, 1134
Bme1390I CCNGG 2 cut(s) 522, 1296
Bme18I GGWCC 2 cut(s) 731, 766
BmgT120I GGNCC 2 cut(s) 731, 766
BmiI GGNNCC 1 cut(s) 912
BmrFI CCNGG 2 cut(s) 522, 1296
BmsI GCATC 4 cut(s) 196, 534, 595, 1110
BpiI GAAGAC 1 cut(s) 150
BpmI CTGGAG 3 cut(s) 85, 254, 986
Bpu10I CCTNAGC 1 cut(s) 1283
BpuEI CTTGAG 1 cut(s) 594
BsaJI CCNNGG 2 cut(s) 520, 782
BsaWI WCCGGW 1 cut(s) 1104
BsaXI ACNNNNNCTCC 7 cut(s) 34, 404, 434, 661, 691, 705, 735
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 1055
Bse1I ACTGG 6 cut(s) 198, 271, 372, 464, 769, 849
BseAI TCCGGA 1 cut(s) 1104
BseBI CCWGG 2 cut(s) 522, 1296
BseDI CCNNGG 2 cut(s) 520, 782
BseGI GGATG 3 cut(s) 60, 187, 516
BseLI CCNNNNNNNGG 2 cut(s) 50, 1055
BseMII CTCAG 5 cut(s) 197, 354, 517, 869, 1274
BseNI ACTGG 6 cut(s) 198, 271, 372, 464, 769, 849
BseRI GAGGAG 8 cut(s) 12, 15, 88, 226, 546, 962, 983, 1253
BseXI GCAGC 3 cut(s) 136, 376, 507
BseYI CCCAGC 2 cut(s) 50, 1183
BshFI GGCC 5 cut(s) 455, 501, 626, 1132, 1294
BshNI GGYRCC 1 cut(s) 910
BsiHKAI GWGCWC 1 cut(s) 856
BsiSI CCGG 1 cut(s) 1105
BslI CCNNNNNNNGG 2 cut(s) 50, 1055
BsmAI GTCTC 2 cut(s) 333, 452
BsmBI CGTCTC 1 cut(s) 333
BsmI GAATGC 2 cut(s) 549, 1162
BsnI GGCC 5 cut(s) 455, 501, 626, 1132, 1294
Bsp1286I GDGCHC 2 cut(s) 753, 856
Bsp13I TCCGGA 1 cut(s) 1104
Bsp143I GATC 4 cut(s) 123, 394, 958, 1144
Bsp19I CCATGG 1 cut(s) 782
BspACI CCGC 6 cut(s) 79, 289, 498, 1059, 1077, 1133
BspANI GGCC 5 cut(s) 455, 501, 626, 1132, 1294
BspCNI CTCAG 5 cut(s) 196, 353, 516, 868, 1275
BspEI TCCGGA 1 cut(s) 1104
BspLI GGNNCC 1 cut(s) 912
BspMAI CTGCAG 1 cut(s) 154
BspPI GGATC 1 cut(s) 1152
BspT107I GGYRCC 1 cut(s) 910
BsrBI CCGCTC 1 cut(s) 291
BsrI ACTGG 6 cut(s) 198, 271, 372, 464, 769, 849
BssECI CCNNGG 2 cut(s) 520, 782
BssMI GATC 4 cut(s) 123, 394, 958, 1144
BssT1I CCWWGG 1 cut(s) 782
Bst2UI CCWGG 2 cut(s) 522, 1296
Bst4CI ACNGT 1 cut(s) 115
Bst6I CTCTTC 1 cut(s) 997
BstC8I GCNNGC 2 cut(s) 1028, 1125
BstDEI CTNAG 6 cut(s) 183, 340, 503, 621, 855, 1283
BstDSI CCRYGG 1 cut(s) 782
BstF5I GGATG 3 cut(s) 60, 187, 516
BstKTI GATC 4 cut(s) 126, 397, 961, 1147
BstMAI GTCTC 2 cut(s) 333, 452
BstMBI GATC 4 cut(s) 123, 394, 958, 1144
BstMWI GCNNNNNNNGC 4 cut(s) 386, 605, 831, 1129
BstNI CCWGG 2 cut(s) 522, 1296
BstSCI CCNGG 2 cut(s) 520, 1294
BstSFI CTRYAG 3 cut(s) 150, 600, 810
BstV1I GCAGC 3 cut(s) 136, 376, 507
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 1 cut(s) 958
BstYI RGATCY 1 cut(s) 958
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 5 cut(s) 455, 501, 626, 1132, 1294
BtgI CCRYGG 1 cut(s) 782
BtsCI GGATG 3 cut(s) 60, 187, 516
BtsI GCAGTG 3 cut(s) 126, 369, 1072
BtsIMutI CAGTG 7 cut(s) 126, 191, 249, 369, 511, 856, 1072
Cac8I GCNNGC 2 cut(s) 1028, 1125
CaiI CAGNNNCTG 2 cut(s) 809, 1074
Cfr13I GGNCC 2 cut(s) 731, 766
CseI GACGC 1 cut(s) 315
Csp6I GTAC 2 cut(s) 111, 911
CviAII CATG 7 cut(s) 91, 164, 451, 783, 1093, 1128, 1141
CviQI GTAC 2 cut(s) 111, 911
DdeI CTNAG 6 cut(s) 183, 340, 503, 621, 855, 1283
DpnI GATC 4 cut(s) 125, 396, 960, 1146
DpnII GATC 4 cut(s) 123, 394, 958, 1144
EaeI YGGCCR 2 cut(s) 1130, 1292
Eam1104I CTCTTC 1 cut(s) 997
EarI CTCTTC 1 cut(s) 997
EciI GGCGGA 2 cut(s) 68, 1074
Eco130I CCWWGG 1 cut(s) 782
Eco24I GRGCYC 1 cut(s) 753
Eco47I GGWCC 2 cut(s) 731, 766
EcoRI GAATTC 1 cut(s) 1084
EcoRII CCWGG 2 cut(s) 520, 1294
EcoT14I CCWWGG 1 cut(s) 782
EcoT38I GRGCYC 1 cut(s) 753
ErhI CCWWGG 1 cut(s) 782
Esp3I CGTCTC 1 cut(s) 333
FaeI CATG 7 cut(s) 94, 167, 454, 786, 1096, 1131, 1144
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FatI CATG 7 cut(s) 90, 163, 450, 782, 1092, 1127, 1140
FauI CCCGC 1 cut(s) 1070
FbaI TGATCA 1 cut(s) 123
Fnu4HI GCNGC 5 cut(s) 150, 390, 496, 499, 1133
FokI GGATG 3 cut(s) 67, 174, 503
FriOI GRGCYC 1 cut(s) 753
Fsp4HI GCNGC 5 cut(s) 150, 390, 496, 499, 1133
FspBI CTAG 2 cut(s) 674, 788
GluI GCNGC 5 cut(s) 150, 390, 496, 499, 1133
GsaI CCCAGC 2 cut(s) 54, 1187
GsuI CTGGAG 3 cut(s) 85, 254, 986
HaeIII GGCC 5 cut(s) 455, 501, 626, 1132, 1294
HapII CCGG 1 cut(s) 1105
HgaI GACGC 1 cut(s) 315
Hin1II CATG 7 cut(s) 94, 167, 454, 786, 1096, 1131, 1144
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 4 cut(s) 155, 634, 806, 971
HpaII CCGG 1 cut(s) 1105
HphI GGTGA 5 cut(s) 109, 520, 1033, 1240, 1247
Hpy166II GTNNAC 1 cut(s) 514
Hpy188I TCNGA 3 cut(s) 355, 478, 858
Hpy188III TCNNGA 6 cut(s) 102, 565, 965, 1040, 1105, 1217
Hpy8I GTNNAC 1 cut(s) 514
HpyCH4III ACNGT 1 cut(s) 115
HpyCH4V TGCA 3 cut(s) 152, 362, 1160
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 605, 831, 1129
HpyF3I CTNAG 6 cut(s) 183, 340, 503, 621, 855, 1283
Hsp92II CATG 7 cut(s) 94, 167, 454, 786, 1096, 1131, 1144
Kpn2I TCCGGA 1 cut(s) 1104
KpnI GGTACC 1 cut(s) 914
Ksp22I TGATCA 1 cut(s) 123
Kzo9I GATC 4 cut(s) 123, 394, 958, 1144
LmnI GCTCC 3 cut(s) 385, 682, 1261
Lsp1109I GCAGC 3 cut(s) 136, 376, 507
LweI GCATC 4 cut(s) 196, 534, 595, 1110
MaeI CTAG 2 cut(s) 674, 788
MaeIII GTNAC 2 cut(s) 115, 1070
MalI GATC 4 cut(s) 125, 396, 960, 1146
MbiI CCGCTC 1 cut(s) 291
MboI GATC 4 cut(s) 123, 394, 958, 1144
MboII GAAGA 6 cut(s) 150, 256, 293, 953, 1014, 1283
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 2 cut(s) 753, 856
MlsI TGGCCA 1 cut(s) 1294
MluCI AATT 3 cut(s) 409, 594, 1084
MluNI TGGCCA 1 cut(s) 1294
MlyI GAGTC 3 cut(s) 164, 815, 980
MmeI TCCRAC 2 cut(s) 501, 861
Mox20I TGGCCA 1 cut(s) 1294
MroI TCCGGA 1 cut(s) 1104
MroXI GAANNNNTTC 1 cut(s) 647
MscI TGGCCA 1 cut(s) 1294
MslI CAYNNNNRTG 1 cut(s) 1118
Msp20I TGGCCA 1 cut(s) 1294
MspA1I CMGCKG 1 cut(s) 498
MspI CCGG 1 cut(s) 1105
MspR9I CCNGG 2 cut(s) 522, 1296
Mva1269I GAATGC 2 cut(s) 549, 1162
MvaI CCWGG 2 cut(s) 522, 1296
MwoI GCNNNNNNNGC 4 cut(s) 386, 605, 831, 1129
NcoI CCATGG 1 cut(s) 782
NdeII GATC 4 cut(s) 123, 394, 958, 1144
NlaIII CATG 7 cut(s) 94, 167, 454, 786, 1096, 1131, 1144
NlaIV GGNNCC 1 cut(s) 912
NmuCI GTSAC 2 cut(s) 115, 1070
PctI GAATGC 2 cut(s) 549, 1162
PdmI GAANNNNTTC 1 cut(s) 647
PfeI GAWTC 1 cut(s) 634
PflMI CCANNNNNTGG 1 cut(s) 50
PkrI GCNGC 5 cut(s) 151, 391, 497, 500, 1134
PleI GAGTC 3 cut(s) 163, 814, 979
PpsI GAGTC 3 cut(s) 163, 814, 979
Psp6I CCWGG 2 cut(s) 520, 1294
PspFI CCCAGC 2 cut(s) 50, 1183
PspGI CCWGG 2 cut(s) 520, 1294
PspN4I GGNNCC 1 cut(s) 912
PspPI GGNCC 2 cut(s) 731, 766
PstI CTGCAG 1 cut(s) 154
PstNI CAGNNNCTG 2 cut(s) 809, 1074
PsuI RGATCY 1 cut(s) 958
RsaI GTAC 2 cut(s) 112, 912
RsaNI GTAC 2 cut(s) 111, 911
RseI CAYNNNNRTG 1 cut(s) 1118
SatI GCNGC 5 cut(s) 150, 390, 496, 499, 1133
Sau3AI GATC 4 cut(s) 123, 394, 958, 1144
Sau96I GGNCC 2 cut(s) 731, 766
SchI GAGTC 3 cut(s) 164, 815, 980
ScrFI CCNGG 2 cut(s) 522, 1296
SduI GDGCHC 2 cut(s) 753, 856
SfaNI GCATC 4 cut(s) 196, 534, 595, 1110
SfcI CTRYAG 3 cut(s) 150, 600, 810
SinI GGWCC 2 cut(s) 731, 766
SmiMI CAYNNNNRTG 1 cut(s) 1118
SmlI CTYRAG 1 cut(s) 609
SmoI CTYRAG 1 cut(s) 609
Sse9I AATT 3 cut(s) 409, 594, 1084
SsiI CCGC 6 cut(s) 79, 289, 498, 1059, 1077, 1133
SspMI CTAG 2 cut(s) 674, 788
StyD4I CCNGG 2 cut(s) 520, 1294
StyI CCWWGG 1 cut(s) 782
TaaI ACNGT 1 cut(s) 115
TaqI TCGA 3 cut(s) 485, 651, 872
TasI AATT 3 cut(s) 409, 594, 1084
TauI GCSGC 2 cut(s) 501, 1135
TfiI GAWTC 1 cut(s) 634
TscAI CASTG 7 cut(s) 133, 198, 256, 369, 511, 856, 1079
TseFI GTSAC 2 cut(s) 115, 1070
TseI GCWGC 3 cut(s) 149, 389, 495
Tsp45I GTSAC 2 cut(s) 115, 1070
TspDTI ATGAA 1 cut(s) 656
TspRI CASTG 7 cut(s) 133, 198, 256, 369, 511, 856, 1079
Van91I CCANNNNNTGG 1 cut(s) 50
VpaK11BI GGWCC 2 cut(s) 731, 766
XapI RAATTY 1 cut(s) 1084
XmnI GAANNNNTTC 1 cut(s) 647
XspI CTAG 2 cut(s) 674, 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.