Rw2G049250

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0009707
Physical Location & Seq
Forward (+)
76763589 .. 76778196
14608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G049250.1

Sequence Viewer

Length: 930 bp
ATGGACGACCCTTTCTTTCTCCAATGGCAATCCACCAACCGCTCTCTCCATCTCCTCTACCCCTCACTCGCTTCCTCATCACCGCCTCTCTCCGCGATCTTCTCTGACTTCGTAGTAGCATCAAGTATCGGCCCACTGGCTTCAACCCACCAAAGGATCCTACCAAAAATACTTTTGGTCTCAAACAAACTCAACATTCCCAACTACATCTTCTCCCCCACTTCGTGTAAGTTCTTCAGTCTCGCGGCTTACCTGCCGACTCTCTTATCAAACACTTCAGATATTAGTTCTCTCACTCAAGTCAACATACAAGGCCTCACCCCTTTGCCAATGACAAGCATTCCTCCCCCACTTAGGAATCAAAATCATATTTCCACATCACTAATACTTCAAAGCTCTCGAGCTCTTTCTAGCGCGAAAGGGATCCTAATGAACACCTTCCATGATTTTGATAAAGTTGATAAAGATGATATACAAGAGGTGAAAGATATGGTCGGACAGTCATTTCTGGAAAGAACAAAGAACAAGGGAATTGTATTAAAAGCGTGGGTAAGCCAACAGGAAATTCTGGAACATCCAGCCATTGGAGGGTTTGTGAATCACTGCGGGTGGAACTCGGTTATGGAAGCAGCCCAAGAAGGGATACCGGTGCTGGCGTGGCCGCAACACGGCGATCAAAGCGTGAACGCTGAGATTGTGGAGAAGGCAGCAGGGTTAGGGATATGGGAGAGCAAATGGGGTTGGGGACTTGAAGGGTTGGTAAGTGGTGAAGAGATAGGAAATAAGATTGTGGAGCTAATGGAAAATCAGAAGGTGAGGGAATTTTCTAGAAATGTTGGGGAAAAGGCTAGGAAAGCTAGTGGGATTGATGGAAAATCAGAGAAGGTGGTCATGGAAATCATGGAGTCTTTGATGCAGAAGAGGAACTAG

Protein Analysis

309

Amino Acids

34.11

Weight (kDa)

6.18

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 179 - 236 8.3e-14 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 261
AccB7I CCANNNNNTGG 1 cut(s) 584
AccBSI CCGCTC 1 cut(s) 42
AccII CGCG 3 cut(s) 95, 245, 416
AciI CCGC 6 cut(s) 40, 83, 93, 245, 606, 662
AclWI GGATC 4 cut(s) 151, 164, 418, 431
AcoI YGGCCR 1 cut(s) 659
AcsI RAATTY 2 cut(s) 564, 821
AcuI CTGAAG 2 cut(s) 220, 261
AdeI CACNNNGTG 1 cut(s) 225
AfiI CCNNNNNNNGG 6 cut(s) 153, 354, 584, 588, 639, 668
AgeI ACCGGT 1 cut(s) 646
AgsI TTSAA 3 cut(s) 144, 392, 752
AjuI GAANNNNNNNTTGG 4 cut(s) 194, 226, 549, 581
AluBI AGCT 4 cut(s) 396, 404, 796, 857
AluI AGCT 4 cut(s) 396, 404, 796, 857
Alw21I GWGCWC 1 cut(s) 406
Alw26I GTCTC 2 cut(s) 184, 245
AlwI GGATC 4 cut(s) 151, 164, 418, 431
Ama87I CYCGRG 1 cut(s) 399
AoxI GGCC 3 cut(s) 130, 313, 659
ApeKI GCWGC 2 cut(s) 629, 707
ApoI RAATTY 2 cut(s) 564, 821
AsiGI ACCGGT 1 cut(s) 646
Asp700I GAANNNNTTC 1 cut(s) 437
AspLEI GCGC 1 cut(s) 416
AspS9I GGNCC 1 cut(s) 131
AsuHPI GGTGA 5 cut(s) 72, 310, 493, 779, 826
AvaI CYCGRG 1 cut(s) 399
BamHI GGATCC 2 cut(s) 156, 423
BanII GRGCYC 1 cut(s) 406
Bbv12I GWGCWC 1 cut(s) 406
BbvI GCAGC 2 cut(s) 641, 719
BccI CCATC 2 cut(s) 57, 863
BceAI ACGGC 1 cut(s) 685
BciVI GTATCC 1 cut(s) 636
BcoDI GTCTC 2 cut(s) 184, 245
BfaI CTAG 5 cut(s) 411, 828, 849, 858, 928
BfuAI ACCTGC 1 cut(s) 261
BfuI GTATCC 1 cut(s) 636
BisI GCNGC 4 cut(s) 246, 630, 662, 708
BlsI GCNGC 4 cut(s) 247, 631, 663, 709
BmeT110I CYCGRG 1 cut(s) 399
BmgT120I GGNCC 1 cut(s) 131
BmiI GGNNCC 2 cut(s) 158, 425
BmsI GCATC 2 cut(s) 128, 903
BpuEI CTTGAG 1 cut(s) 282
BsaI GGTCTC 1 cut(s) 184
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 4 cut(s) 197, 227, 579, 609
Bsc4I CCNNNNNNNGG 6 cut(s) 153, 354, 584, 588, 639, 668
Bse118I RCCGGY 1 cut(s) 646
Bse1I ACTGG 1 cut(s) 141
BseGI GGATG 1 cut(s) 574
BseLI CCNNNNNNNGG 6 cut(s) 153, 354, 584, 588, 639, 668
BseMII CTCAG 1 cut(s) 681
BseNI ACTGG 1 cut(s) 141
BseRI GAGGAG 1 cut(s) 44
BseXI GCAGC 2 cut(s) 641, 719
Bsh1236I CGCG 3 cut(s) 95, 245, 416
BshFI GGCC 3 cut(s) 132, 315, 661
BshTI ACCGGT 1 cut(s) 646
BsiHKAI GWGCWC 1 cut(s) 406
BsiHKCI CYCGRG 1 cut(s) 399
BsiSI CCGG 1 cut(s) 647
BslFI GGGAC 1 cut(s) 759
BslI CCNNNNNNNGG 6 cut(s) 153, 354, 584, 588, 639, 668
BsmAI GTCTC 2 cut(s) 184, 245
BsmFI GGGAC 1 cut(s) 759
BsmI GAATGC 1 cut(s) 339
BsnI GGCC 3 cut(s) 132, 315, 661
Bso31I GGTCTC 1 cut(s) 184
BsoBI CYCGRG 1 cut(s) 399
Bsp1286I GDGCHC 1 cut(s) 406
Bsp143I GATC 4 cut(s) 96, 156, 423, 673
BspACI CCGC 6 cut(s) 40, 83, 93, 245, 606, 662
BspANI GGCC 3 cut(s) 132, 315, 661
BspCNI CTCAG 1 cut(s) 682
BspFNI CGCG 3 cut(s) 95, 245, 416
BspLI GGNNCC 2 cut(s) 158, 425
BspMI ACCTGC 1 cut(s) 261
BspPI GGATC 4 cut(s) 151, 164, 418, 431
BspTNI GGTCTC 1 cut(s) 184
BsrBI CCGCTC 1 cut(s) 42
BsrFI RCCGGY 1 cut(s) 646
BsrI ACTGG 1 cut(s) 141
BssAI RCCGGY 1 cut(s) 646
BssMI GATC 4 cut(s) 96, 156, 423, 673
Bst4CI ACNGT 1 cut(s) 501
Bst6I CTCTTC 2 cut(s) 765, 914
BstC8I GCNNGC 1 cut(s) 654
BstDEI CTNAG 2 cut(s) 353, 690
BstF5I GGATG 1 cut(s) 574
BstFNI CGCG 3 cut(s) 95, 245, 416
BstHHI GCGC 1 cut(s) 416
BstKTI GATC 4 cut(s) 99, 159, 426, 676
BstMAI GTCTC 2 cut(s) 184, 245
BstMBI GATC 4 cut(s) 96, 156, 423, 673
BstMWI GCNNNNNNNGC 3 cut(s) 658, 678, 854
BstUI CGCG 3 cut(s) 95, 245, 416
BstV1I GCAGC 2 cut(s) 641, 719
BstX2I RGATCY 2 cut(s) 156, 423
BstYI RGATCY 2 cut(s) 156, 423
BsuI GTATCC 1 cut(s) 636
BsuRI GGCC 3 cut(s) 132, 315, 661
BtsCI GGATG 1 cut(s) 574
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 2 cut(s) 134, 601
BveI ACCTGC 1 cut(s) 261
Cac8I GCNNGC 1 cut(s) 654
CfoI GCGC 1 cut(s) 416
Cfr10I RCCGGY 1 cut(s) 646
Cfr13I GGNCC 1 cut(s) 131
CspAI ACCGGT 1 cut(s) 646
CviAII CATG 3 cut(s) 443, 892, 901
DdeI CTNAG 2 cut(s) 353, 690
DpnI GATC 4 cut(s) 98, 158, 425, 675
DpnII GATC 4 cut(s) 96, 156, 423, 673
DraIII CACNNNGTG 1 cut(s) 225
EaeI YGGCCR 1 cut(s) 659
Eam1104I CTCTTC 2 cut(s) 765, 914
EarI CTCTTC 2 cut(s) 765, 914
Ecl136II GAGCTC 1 cut(s) 404
Eco147I AGGCCT 1 cut(s) 315
Eco24I GRGCYC 1 cut(s) 406
Eco31I GGTCTC 1 cut(s) 184
Eco53kI GAGCTC 1 cut(s) 404
Eco57I CTGAAG 2 cut(s) 220, 261
Eco88I CYCGRG 1 cut(s) 399
EcoICRI GAGCTC 1 cut(s) 404
EcoT38I GRGCYC 1 cut(s) 406
FaeI CATG 3 cut(s) 446, 895, 904
FaiI YATR 9 cut(s) 308, 369, 444, 473, 491, 623, 724, 893, 902
FaqI GGGAC 1 cut(s) 759
FatI CATG 3 cut(s) 442, 891, 900
FauI CCCGC 1 cut(s) 599
Fnu4HI GCNGC 4 cut(s) 246, 630, 662, 708
FokI GGATG 1 cut(s) 561
FriOI GRGCYC 1 cut(s) 406
Fsp4HI GCNGC 4 cut(s) 246, 630, 662, 708
FspBI CTAG 5 cut(s) 411, 828, 849, 858, 928
GlaI GCGC 1 cut(s) 415
GluI GCNGC 4 cut(s) 246, 630, 662, 708
HaeIII GGCC 3 cut(s) 132, 315, 661
HapII CCGG 1 cut(s) 647
HhaI GCGC 1 cut(s) 416
Hin1II CATG 3 cut(s) 446, 895, 904
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HinfI GANTC 4 cut(s) 259, 358, 598, 905
HpaII CCGG 1 cut(s) 647
HphI GGTGA 5 cut(s) 72, 310, 493, 779, 826
Hpy166II GTNNAC 2 cut(s) 304, 685
Hpy188I TCNGA 5 cut(s) 106, 280, 497, 810, 880
Hpy188III TCNNGA 4 cut(s) 399, 509, 569, 828
Hpy8I GTNNAC 2 cut(s) 304, 685
HpyAV CCTTC 6 cut(s) 448, 632, 697, 746, 805, 877
HpyCH4III ACNGT 1 cut(s) 501
HpyCH4V TGCA 1 cut(s) 916
HpyF10VI GCNNNNNNNGC 3 cut(s) 658, 678, 854
HpyF3I CTNAG 2 cut(s) 353, 690
Hsp92II CATG 3 cut(s) 446, 895, 904
HspAI GCGC 1 cut(s) 414
Kzo9I GATC 4 cut(s) 96, 156, 423, 673
LmnI GCTCC 1 cut(s) 793
LpnPI CCDG 9 cut(s) 122, 266, 494, 545, 554, 591, 638, 660, 696
Lsp1109I GCAGC 2 cut(s) 641, 719
LweI GCATC 2 cut(s) 128, 903
MaeI CTAG 5 cut(s) 411, 828, 849, 858, 928
MalI GATC 4 cut(s) 98, 158, 425, 675
MbiI CCGCTC 1 cut(s) 42
MboI GATC 4 cut(s) 96, 156, 423, 673
MboII GAAGA 4 cut(s) 91, 202, 226, 782
MflI RGATCY 2 cut(s) 156, 423
MhlI GDGCHC 1 cut(s) 406
MluCI AATT 3 cut(s) 531, 564, 821
MlyI GAGTC 2 cut(s) 253, 914
MmeI TCCRAC 1 cut(s) 475
MroXI GAANNNNTTC 1 cut(s) 437
MseI TTAA 1 cut(s) 539
MspI CCGG 1 cut(s) 647
Mva1269I GAATGC 1 cut(s) 339
MvnI CGCG 3 cut(s) 95, 245, 416
MwoI GCNNNNNNNGC 3 cut(s) 658, 678, 854
NdeII GATC 4 cut(s) 96, 156, 423, 673
NlaIII CATG 3 cut(s) 446, 895, 904
NlaIV GGNNCC 2 cut(s) 158, 425
PaeR7I CTCGAG 1 cut(s) 399
PceI AGGCCT 1 cut(s) 315
PctI GAATGC 1 cut(s) 339
PdmI GAANNNNTTC 1 cut(s) 437
PfeI GAWTC 2 cut(s) 358, 598
PflMI CCANNNNNTGG 1 cut(s) 584
PinAI ACCGGT 1 cut(s) 646
PkrI GCNGC 4 cut(s) 247, 631, 663, 709
PleI GAGTC 2 cut(s) 253, 913
PpsI GAGTC 2 cut(s) 253, 913
Psp124BI GAGCTC 1 cut(s) 406
PspN4I GGNNCC 2 cut(s) 158, 425
PspPI GGNCC 1 cut(s) 131
PsuI RGATCY 2 cut(s) 156, 423
SacI GAGCTC 1 cut(s) 406
SaqAI TTAA 1 cut(s) 539
SatI GCNGC 4 cut(s) 246, 630, 662, 708
Sau3AI GATC 4 cut(s) 96, 156, 423, 673
Sau96I GGNCC 1 cut(s) 131
SchI GAGTC 2 cut(s) 253, 914
SduI GDGCHC 1 cut(s) 406
SetI ASST 9 cut(s) 255, 398, 406, 440, 483, 798, 816, 859, 888
SfaNI GCATC 2 cut(s) 128, 903
Sfr274I CTCGAG 1 cut(s) 399
SlaI CTCGAG 1 cut(s) 399
SmlI CTYRAG 2 cut(s) 297, 399
SmoI CTYRAG 2 cut(s) 297, 399
Sse9I AATT 3 cut(s) 531, 564, 821
SseBI AGGCCT 1 cut(s) 315
SsiI CCGC 6 cut(s) 40, 83, 93, 245, 606, 662
SspMI CTAG 5 cut(s) 411, 828, 849, 858, 928
SstI GAGCTC 1 cut(s) 406
StuI AGGCCT 1 cut(s) 315
TaaI ACNGT 1 cut(s) 501
TaqI TCGA 1 cut(s) 400
TasI AATT 3 cut(s) 531, 564, 821
TauI GCSGC 2 cut(s) 248, 664
TfiI GAWTC 2 cut(s) 358, 598
Tru1I TTAA 1 cut(s) 539
Tru9I TTAA 1 cut(s) 539
TscAI CASTG 2 cut(s) 141, 608
TseI GCWGC 2 cut(s) 629, 707
TspDTI ATGAA 1 cut(s) 446
TspRI CASTG 2 cut(s) 141, 608
Van91I CCANNNNNTGG 1 cut(s) 584
XapI RAATTY 2 cut(s) 564, 821
XbaI TCTAGA 1 cut(s) 827
XhoI CTCGAG 1 cut(s) 399
XmnI GAANNNNTTC 1 cut(s) 437
XspI CTAG 5 cut(s) 411, 828, 849, 858, 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.