C2 and GRAM domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03370 AT1G03370 |
| fragaria_vesca | FvH4_3g00230 FvH4_3g00230 FvH4_3g00230 FvH4_3g00230 |
| malus_domestica | MD05G1362700.v1.1 MD10G1340200.v1.1 |
| prunus_persica | Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 |
| pyrus_communis | pycom05g32910 pycom10g29010 |
| rosa_chinensis | RchiOBHm_Chr5g0000311 |
| rosa_laevigata | RLG00000030858 |
| rosa_multiflora | Rmu_ssc0000385.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00075810 |
| rosa_rugosa | Rorug04G0383000 Rorug04G0383100 Rorug04G0383100 |
| rosa_samantha | Rh5AG002300 Rh5CG002600 Rh5DG002600 |
| rosa_wichuraiana | Rw5G000280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 531 |
| Acc65I | GGTACC | 1 cut(s) | 303 |
| AccB1I | GGYRCC | 1 cut(s) | 303 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1303 |
| AccI | GTMKAC | 1 cut(s) | 2922 |
| AciI | CCGC | 8 cut(s) | 395, 681, 1147, 2050, 2161, 2314, 2782, 2840 |
| AclI | AACGTT | 1 cut(s) | 1992 |
| AclWI | GGATC | 7 cut(s) | 57, 62, 675, 1284, 1670, 1736, 2497 |
| AcoI | YGGCCR | 1 cut(s) | 2315 |
| AcsI | RAATTY | 8 cut(s) | 1153, 1487, 1962, 2065, 2105, 2200, 2590, 3035 |
| AcuI | CTGAAG | 3 cut(s) | 2396, 2514, 3001 |
| AfaI | GTAC | 6 cut(s) | 218, 305, 1350, 1410, 2767, 2982 |
| AflIII | ACRYGT | 1 cut(s) | 2734 |
| AhlI | ACTAGT | 1 cut(s) | 2762 |
| AjnI | CCWGG | 4 cut(s) | 751, 1093, 1296, 2910 |
| Alw21I | GWGCWC | 1 cut(s) | 1169 |
| Alw26I | GTCTC | 4 cut(s) | 481, 1381, 2824, 3023 |
| AlwI | GGATC | 7 cut(s) | 57, 62, 675, 1284, 1670, 1736, 2497 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 407 |
| Ama87I | CYCGRG | 1 cut(s) | 30 |
| AoxI | GGCC | 6 cut(s) | 1097, 1557, 1852, 2158, 2315, 2533 |
| ApeKI | GCWGC | 6 cut(s) | 85, 903, 941, 1105, 1612, 1649 |
| ApoI | RAATTY | 8 cut(s) | 1153, 1487, 1962, 2065, 2105, 2200, 2590, 3035 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 410, 442 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1010, 2253 |
| Asp718I | GGTACC | 1 cut(s) | 303 |
| AspLEI | GCGC | 4 cut(s) | 532, 1059, 1567, 2416 |
| AsuC2I | CCSGG | 1 cut(s) | 2319 |
| AvaI | CYCGRG | 1 cut(s) | 30 |
| AvaII | GGWCC | 8 cut(s) | 108, 172, 455, 979, 1284, 1294, 1826, 2626 |
| AxyI | CCTNAGG | 1 cut(s) | 161 |
| BanI | GGYRCC | 1 cut(s) | 303 |
| BanII | GRGCYC | 2 cut(s) | 31, 1201 |
| BauI | CACGAG | 1 cut(s) | 717 |
| BbsI | GAAGAC | 4 cut(s) | 131, 216, 259, 542 |
| Bbv12I | GWGCWC | 1 cut(s) | 1169 |
| BbvI | GCAGC | 6 cut(s) | 97, 915, 953, 1092, 1599, 1661 |
| BccI | CCATC | 8 cut(s) | 404, 466, 1117, 1598, 1817, 1962, 2011, 2354 |
| BciT130I | CCWGG | 4 cut(s) | 753, 1095, 1298, 2912 |
| BclI | TGATCA | 1 cut(s) | 1579 |
| BcnI | CCSGG | 1 cut(s) | 2319 |
| BcoDI | GTCTC | 4 cut(s) | 481, 1381, 2824, 3023 |
| BcuI | ACTAGT | 1 cut(s) | 2762 |
| BfaI | CTAG | 5 cut(s) | 767, 1710, 2445, 2763, 2807 |
| BfmI | CTRYAG | 3 cut(s) | 864, 1160, 2153 |
| BglII | AGATCT | 2 cut(s) | 34, 2447 |
| BisI | GCNGC | 8 cut(s) | 86, 904, 942, 1106, 1613, 1650, 2161, 2315 |
| BlsI | GCNGC | 8 cut(s) | 87, 905, 943, 1107, 1614, 1651, 2162, 2316 |
| BmcAI | AGTACT | 2 cut(s) | 218, 2767 |
| Bme1390I | CCNGG | 5 cut(s) | 753, 1095, 1298, 2319, 2912 |
| Bme18I | GGWCC | 8 cut(s) | 108, 172, 455, 979, 1284, 1294, 1826, 2626 |
| BmeT110I | CYCGRG | 1 cut(s) | 30 |
| BmiI | GGNNCC | 4 cut(s) | 305, 1198, 1285, 1911 |
| BmrFI | CCNGG | 5 cut(s) | 753, 1095, 1298, 2319, 2912 |
| BmrI | ACTGGG | 2 cut(s) | 1321, 2737 |
| BmsI | GCATC | 6 cut(s) | 262, 1316, 1762, 2323, 2897, 2965 |
| BmuI | ACTGGG | 2 cut(s) | 1321, 2737 |
| BpiI | GAAGAC | 4 cut(s) | 131, 216, 259, 542 |
| BpmI | CTGGAG | 2 cut(s) | 804, 1469 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1101, 1932, 2460 |
| BpuEI | CTTGAG | 1 cut(s) | 583 |
| BpuMI | CCSGG | 1 cut(s) | 2319 |
| BsaBI | GATNNNNATC | 1 cut(s) | 430 |
| BsaI | GGTCTC | 2 cut(s) | 1381, 2824 |
| BsaJI | CCNNGG | 4 cut(s) | 642, 1094, 1597, 2675 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1512, 1542 |
| Bse118I | RCCGGY | 1 cut(s) | 275 |
| Bse1I | ACTGG | 6 cut(s) | 1228, 1262, 1327, 1942, 2389, 2743 |
| Bse21I | CCTNAGG | 1 cut(s) | 161 |
| Bse3DI | GCAATG | 3 cut(s) | 51, 1705, 1782 |
| Bse8I | GATNNNNATC | 1 cut(s) | 430 |
| BseBI | CCWGG | 4 cut(s) | 753, 1095, 1298, 2912 |
| BseDI | CCNNGG | 4 cut(s) | 642, 1094, 1597, 2675 |
| BseGI | GGATG | 6 cut(s) | 211, 1155, 1786, 1807, 2338, 2912 |
| BseJI | GATNNNNATC | 1 cut(s) | 430 |
| BseMI | GCAATG | 3 cut(s) | 51, 1705, 1782 |
| BseNI | ACTGG | 6 cut(s) | 1228, 1262, 1327, 1942, 2389, 2743 |
| BseRI | GAGGAG | 3 cut(s) | 197, 771, 2766 |
| BseX3I | CGGCCG | 1 cut(s) | 2315 |
| BseXI | GCAGC | 6 cut(s) | 97, 915, 953, 1092, 1599, 1661 |
| BseYI | CCCAGC | 3 cut(s) | 88, 1430, 1531 |
| BsgI | GTGCAG | 1 cut(s) | 104 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2318 |
| BshFI | GGCC | 6 cut(s) | 1099, 1559, 1854, 2160, 2317, 2535 |
| BshNI | GGYRCC | 1 cut(s) | 303 |
| BsiEI | CGRYCG | 1 cut(s) | 2318 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1169 |
| BsiHKCI | CYCGRG | 1 cut(s) | 30 |
| BsiSI | CCGG | 2 cut(s) | 276, 2318 |
| BslFI | GGGAC | 3 cut(s) | 271, 1231, 2764 |
| BsmAI | GTCTC | 4 cut(s) | 481, 1381, 2824, 3023 |
| BsmBI | CGTCTC | 1 cut(s) | 3023 |
| BsmFI | GGGAC | 3 cut(s) | 271, 1231, 2764 |
| BsnI | GGCC | 6 cut(s) | 1099, 1559, 1854, 2160, 2317, 2535 |
| Bso31I | GGTCTC | 2 cut(s) | 1381, 2824 |
| BsoBI | CYCGRG | 1 cut(s) | 30 |
| Bsp1286I | GDGCHC | 3 cut(s) | 31, 1169, 1201 |
| Bsp1407I | TGTACA | 1 cut(s) | 1408 |
| Bsp19I | CCATGG | 1 cut(s) | 2675 |
| BspACI | CCGC | 8 cut(s) | 395, 681, 1147, 2050, 2161, 2314, 2782, 2840 |
| BspANI | GGCC | 6 cut(s) | 1099, 1559, 1854, 2160, 2317, 2535 |
| BspHI | TCATGA | 1 cut(s) | 2304 |
| BspLI | GGNNCC | 4 cut(s) | 305, 1198, 1285, 1911 |
| BspMAI | CTGCAG | 2 cut(s) | 1164, 2157 |
| BspPI | GGATC | 7 cut(s) | 57, 62, 675, 1284, 1670, 1736, 2497 |
| BspT107I | GGYRCC | 1 cut(s) | 303 |
| BspTNI | GGTCTC | 2 cut(s) | 1381, 2824 |
| BsrDI | GCAATG | 3 cut(s) | 51, 1705, 1782 |
| BsrFI | RCCGGY | 1 cut(s) | 275 |
| BsrGI | TGTACA | 1 cut(s) | 1408 |
| BsrI | ACTGG | 6 cut(s) | 1228, 1262, 1327, 1942, 2389, 2743 |
| BssAI | RCCGGY | 1 cut(s) | 275 |
| BssECI | CCNNGG | 4 cut(s) | 642, 1094, 1597, 2675 |
| BssNAI | GTATAC | 1 cut(s) | 2923 |
| BssSI | CACGAG | 1 cut(s) | 717 |
| BssT1I | CCWWGG | 2 cut(s) | 1597, 2675 |
| Bst1107I | GTATAC | 1 cut(s) | 2923 |
| Bst2BI | CACGAG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 4 cut(s) | 753, 1095, 1298, 2912 |
| Bst4CI | ACNGT | 9 cut(s) | 586, 885, 1220, 1372, 1384, 1621, 2047, 2085, 2630 |
| Bst6I | CTCTTC | 6 cut(s) | 144, 510, 682, 1920, 2244, 2508 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2470 |
| BstAUI | TGTACA | 1 cut(s) | 1408 |
| BstDSI | CCRYGG | 1 cut(s) | 2675 |
| BstEII | GGTNACC | 1 cut(s) | 2052 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 179, 1917, 2237 |
| BstF5I | GGATG | 6 cut(s) | 211, 1155, 1786, 1807, 2338, 2912 |
| BstHHI | GCGC | 4 cut(s) | 532, 1059, 1567, 2416 |
| BstMAI | GTCTC | 4 cut(s) | 481, 1381, 2824, 3023 |
| BstMCI | CGRYCG | 1 cut(s) | 2318 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 94, 401, 529, 632, 909, 1105, 1468, 2470 |
| BstNI | CCWGG | 4 cut(s) | 753, 1095, 1298, 2912 |
| BstNSI | RCATGY | 2 cut(s) | 1941, 2554 |
| BstPI | GGTNACC | 1 cut(s) | 2052 |
| BstSCI | CCNGG | 5 cut(s) | 751, 1093, 1296, 2317, 2910 |
| BstSFI | CTRYAG | 3 cut(s) | 864, 1160, 2153 |
| BstV1I | GCAGC | 6 cut(s) | 97, 915, 953, 1092, 1599, 1661 |
| BstV2I | GAAGAC | 4 cut(s) | 131, 216, 259, 542 |
| BstX2I | RGATCY | 5 cut(s) | 34, 49, 1276, 2447, 2502 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1604 |
| BstYI | RGATCY | 5 cut(s) | 34, 49, 1276, 2447, 2502 |
| BstZ17I | GTATAC | 1 cut(s) | 2923 |
| BstZI | CGGCCG | 1 cut(s) | 2315 |
| Bsu36I | CCTNAGG | 1 cut(s) | 161 |
| BsuRI | GGCC | 6 cut(s) | 1099, 1559, 1854, 2160, 2317, 2535 |
| BtgI | CCRYGG | 1 cut(s) | 2675 |
| BtsCI | GGATG | 6 cut(s) | 211, 1155, 1786, 1807, 2338, 2912 |
| BtsI | GCAGTG | 2 cut(s) | 1310, 1582 |
| BtsIMutI | CAGTG | 6 cut(s) | 457, 1310, 1368, 1380, 1582, 3025 |
| CaiI | CAGNNNCTG | 1 cut(s) | 407 |
| CciI | TCATGA | 1 cut(s) | 2304 |
| CfoI | GCGC | 4 cut(s) | 532, 1059, 1567, 2416 |
| Cfr10I | RCCGGY | 1 cut(s) | 275 |
| CsiI | ACCWGGT | 1 cut(s) | 1296 |
| Csp6I | GTAC | 6 cut(s) | 217, 304, 1349, 1409, 2766, 2981 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 328, 363 |
| CviQI | GTAC | 6 cut(s) | 217, 304, 1349, 1409, 2766, 2981 |
| DraI | TTTAAA | 1 cut(s) | 1212 |
| EaeI | YGGCCR | 1 cut(s) | 2315 |
| EagI | CGGCCG | 1 cut(s) | 2315 |
| Eam1104I | CTCTTC | 6 cut(s) | 144, 510, 682, 1920, 2244, 2508 |
| EarI | CTCTTC | 6 cut(s) | 144, 510, 682, 1920, 2244, 2508 |
| EciI | GGCGGA | 1 cut(s) | 1162 |
| EclXI | CGGCCG | 1 cut(s) | 2315 |
| Eco130I | CCWWGG | 2 cut(s) | 1597, 2675 |
| Eco147I | AGGCCT | 1 cut(s) | 2535 |
| Eco24I | GRGCYC | 2 cut(s) | 31, 1201 |
| Eco31I | GGTCTC | 2 cut(s) | 1381, 2824 |
| Eco47I | GGWCC | 8 cut(s) | 108, 172, 455, 979, 1284, 1294, 1826, 2626 |
| Eco52I | CGGCCG | 1 cut(s) | 2315 |
| Eco57I | CTGAAG | 3 cut(s) | 2396, 2514, 3001 |
| Eco81I | CCTNAGG | 1 cut(s) | 161 |
| Eco88I | CYCGRG | 1 cut(s) | 30 |
| Eco91I | GGTNACC | 1 cut(s) | 2052 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 179, 1917, 2237 |
| EcoO109I | RGGNCCY | 1 cut(s) | 172 |
| EcoO65I | GGTNACC | 1 cut(s) | 2052 |
| EcoRI | GAATTC | 2 cut(s) | 1487, 3035 |
| EcoRII | CCWGG | 4 cut(s) | 751, 1093, 1296, 2910 |
| EcoT14I | CCWWGG | 2 cut(s) | 1597, 2675 |
| EcoT38I | GRGCYC | 2 cut(s) | 31, 1201 |
| ErhI | CCWWGG | 2 cut(s) | 1597, 2675 |
| Esp3I | CGTCTC | 1 cut(s) | 3023 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 113, 145, 507, 539 |
| FaqI | GGGAC | 3 cut(s) | 271, 1231, 2764 |
| FauI | CCCGC | 1 cut(s) | 2789 |
| FbaI | TGATCA | 1 cut(s) | 1579 |
| FblI | GTMKAC | 1 cut(s) | 2922 |
| Fnu4HI | GCNGC | 8 cut(s) | 86, 904, 942, 1106, 1613, 1650, 2161, 2315 |
| FokI | GGATG | 6 cut(s) | 218, 1162, 1793, 1814, 2345, 2919 |
| FriOI | GRGCYC | 2 cut(s) | 31, 1201 |
| Fsp4HI | GCNGC | 8 cut(s) | 86, 904, 942, 1106, 1613, 1650, 2161, 2315 |
| FspBI | CTAG | 5 cut(s) | 767, 1710, 2445, 2763, 2807 |
| FspI | TGCGCA | 1 cut(s) | 531 |
| GlaI | GCGC | 4 cut(s) | 531, 1058, 1566, 2415 |
| GluI | GCNGC | 8 cut(s) | 86, 904, 942, 1106, 1613, 1650, 2161, 2315 |
| GsaI | CCCAGC | 3 cut(s) | 92, 1434, 1535 |
| GsuI | CTGGAG | 2 cut(s) | 804, 1469 |
| HaeIII | GGCC | 6 cut(s) | 1099, 1559, 1854, 2160, 2317, 2535 |
| HapII | CCGG | 2 cut(s) | 276, 2318 |
| HhaI | GCGC | 4 cut(s) | 532, 1059, 1567, 2416 |
| Hin6I | GCGC | 4 cut(s) | 530, 1057, 1565, 2414 |
| HinP1I | GCGC | 4 cut(s) | 530, 1057, 1565, 2414 |
| HincII | GTYRAC | 1 cut(s) | 610 |
| HindII | GTYRAC | 1 cut(s) | 610 |
| HindIII | AAGCTT | 1 cut(s) | 521 |
| HpaII | CCGG | 2 cut(s) | 276, 2318 |
| Hpy166II | GTNNAC | 4 cut(s) | 382, 610, 1692, 2923 |
| Hpy8I | GTNNAC | 4 cut(s) | 382, 610, 1692, 2923 |
| HpyCH4III | ACNGT | 9 cut(s) | 586, 885, 1220, 1372, 1384, 1621, 2047, 2085, 2630 |
| HpyCH4IV | ACGT | 3 cut(s) | 1129, 1992, 2734 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 94, 401, 529, 632, 909, 1105, 1468, 2470 |
| HpySE526I | ACGT | 3 cut(s) | 1129, 1992, 2734 |
| HspAI | GCGC | 4 cut(s) | 530, 1057, 1565, 2414 |
| KpnI | GGTACC | 1 cut(s) | 307 |
| KroI | GCCGGC | 1 cut(s) | 275 |
| KroNI | GCCGGC | 1 cut(s) | 277 |
| Ksp22I | TGATCA | 1 cut(s) | 1579 |
| LmnI | GCTCC | 3 cut(s) | 184, 255, 1196 |
| Lsp1109I | GCAGC | 6 cut(s) | 97, 915, 953, 1092, 1599, 1661 |
| LweI | GCATC | 6 cut(s) | 262, 1316, 1762, 2323, 2897, 2965 |
| MabI | ACCWGGT | 1 cut(s) | 1296 |
| MaeI | CTAG | 5 cut(s) | 767, 1710, 2445, 2763, 2807 |
| MaeII | ACGT | 3 cut(s) | 1129, 1992, 2734 |
| MfeI | CAATTG | 3 cut(s) | 773, 1479, 2295 |
| MflI | RGATCY | 5 cut(s) | 34, 49, 1276, 2447, 2502 |
| MhlI | GDGCHC | 3 cut(s) | 31, 1169, 1201 |
| MlyI | GAGTC | 4 cut(s) | 392, 1596, 2302, 2464 |
| MmeI | TCCRAC | 1 cut(s) | 337 |
| MroNI | GCCGGC | 1 cut(s) | 275 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1010, 2253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1172 |
| MspA1I | CMGCKG | 2 cut(s) | 88, 1652 |
| MspI | CCGG | 2 cut(s) | 276, 2318 |
| MspR9I | CCNGG | 5 cut(s) | 753, 1095, 1298, 2319, 2912 |
| MunI | CAATTG | 3 cut(s) | 773, 1479, 2295 |
| MvaI | CCWGG | 4 cut(s) | 753, 1095, 1298, 2912 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 94, 401, 529, 632, 909, 1105, 1468, 2470 |
| NaeI | GCCGGC | 1 cut(s) | 277 |
| NciI | CCSGG | 1 cut(s) | 2319 |
| NcoI | CCATGG | 1 cut(s) | 2675 |
| NgoMIV | GCCGGC | 1 cut(s) | 275 |
| NlaIV | GGNNCC | 4 cut(s) | 305, 1198, 1285, 1911 |
| NmeAIII | GCCGAG | 1 cut(s) | 2932 |
| NmuCI | GTSAC | 8 cut(s) | 416, 714, 781, 2052, 2129, 2210, 2758, 2846 |
| NsbI | TGCGCA | 1 cut(s) | 531 |
| NspI | RCATGY | 2 cut(s) | 1941, 2554 |
| PaeI | GCATGC | 1 cut(s) | 1941 |
| PaeR7I | CTCGAG | 1 cut(s) | 30 |
| PagI | TCATGA | 1 cut(s) | 2304 |
| PceI | AGGCCT | 1 cut(s) | 2535 |
| PdiI | GCCGGC | 1 cut(s) | 277 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1010, 2253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1303 |
| PkrI | GCNGC | 8 cut(s) | 87, 905, 943, 1107, 1614, 1651, 2162, 2316 |
| PleI | GAGTC | 4 cut(s) | 392, 1595, 2302, 2463 |
| PpsI | GAGTC | 4 cut(s) | 392, 1595, 2302, 2463 |
| PpuMI | RGGWCCY | 1 cut(s) | 172 |
| Psp1406I | AACGTT | 1 cut(s) | 1992 |
| Psp5II | RGGWCCY | 1 cut(s) | 172 |
| Psp6I | CCWGG | 4 cut(s) | 751, 1093, 1296, 2910 |
| PspEI | GGTNACC | 1 cut(s) | 2052 |
| PspFI | CCCAGC | 3 cut(s) | 88, 1430, 1531 |
| PspGI | CCWGG | 4 cut(s) | 751, 1093, 1296, 2910 |
| PspN4I | GGNNCC | 4 cut(s) | 305, 1198, 1285, 1911 |
| PspPPI | RGGWCCY | 1 cut(s) | 172 |
| PstI | CTGCAG | 2 cut(s) | 1164, 2157 |
| PstNI | CAGNNNCTG | 1 cut(s) | 407 |
| PsuI | RGATCY | 5 cut(s) | 34, 49, 1276, 2447, 2502 |
| PvuII | CAGCTG | 2 cut(s) | 88, 1652 |
| RsaI | GTAC | 6 cut(s) | 218, 305, 1350, 1410, 2767, 2982 |
| RsaNI | GTAC | 6 cut(s) | 217, 304, 1349, 1409, 2766, 2981 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1172 |
| SatI | GCNGC | 8 cut(s) | 86, 904, 942, 1106, 1613, 1650, 2161, 2315 |
| SbfI | CCTGCAGG | 1 cut(s) | 2157 |
| ScaI | AGTACT | 2 cut(s) | 218, 2767 |
| SchI | GAGTC | 4 cut(s) | 392, 1596, 2302, 2464 |
| ScrFI | CCNGG | 5 cut(s) | 753, 1095, 1298, 2319, 2912 |
| SdaI | CCTGCAGG | 1 cut(s) | 2157 |
| SduI | GDGCHC | 3 cut(s) | 31, 1169, 1201 |
| SexAI | ACCWGGT | 1 cut(s) | 1296 |
| SfaNI | GCATC | 6 cut(s) | 262, 1316, 1762, 2323, 2897, 2965 |
| SfcI | CTRYAG | 3 cut(s) | 864, 1160, 2153 |
| Sfr274I | CTCGAG | 1 cut(s) | 30 |
| SinI | GGWCC | 8 cut(s) | 108, 172, 455, 979, 1284, 1294, 1826, 2626 |
| SlaI | CTCGAG | 1 cut(s) | 30 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1172 |
| SmlI | CTYRAG | 2 cut(s) | 30, 598 |
| SmoI | CTYRAG | 2 cut(s) | 30, 598 |
| SpeI | ACTAGT | 1 cut(s) | 2762 |
| SphI | GCATGC | 1 cut(s) | 1941 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2157 |
| SseBI | AGGCCT | 1 cut(s) | 2535 |
| SsiI | CCGC | 8 cut(s) | 395, 681, 1147, 2050, 2161, 2314, 2782, 2840 |
| SspI | AATATT | 3 cut(s) | 1355, 1761, 1885 |
| SspMI | CTAG | 5 cut(s) | 767, 1710, 2445, 2763, 2807 |
| StuI | AGGCCT | 1 cut(s) | 2535 |
| StyD4I | CCNGG | 5 cut(s) | 751, 1093, 1296, 2317, 2910 |
| StyI | CCWWGG | 2 cut(s) | 1597, 2675 |
| TaaI | ACNGT | 9 cut(s) | 586, 885, 1220, 1372, 1384, 1621, 2047, 2085, 2630 |
| TaiI | ACGT | 3 cut(s) | 1132, 1995, 2737 |
| TaqI | TCGA | 8 cut(s) | 31, 270, 550, 1632, 1918, 2822, 2869, 2880 |
| TaqII | GACCGA | 1 cut(s) | 632 |
| TatI | WGTACW | 5 cut(s) | 216, 1348, 1408, 2765, 2980 |
| TauI | GCSGC | 2 cut(s) | 2163, 2317 |
| TscAI | CASTG | 6 cut(s) | 457, 1317, 1375, 1387, 1582, 3025 |
| TseFI | GTSAC | 8 cut(s) | 416, 714, 781, 2052, 2129, 2210, 2758, 2846 |
| TseI | GCWGC | 6 cut(s) | 85, 903, 941, 1105, 1612, 1649 |
| Tsp45I | GTSAC | 8 cut(s) | 416, 714, 781, 2052, 2129, 2210, 2758, 2846 |
| TspGWI | ACGGA | 4 cut(s) | 60, 1038, 1668, 3047 |
| TspRI | CASTG | 6 cut(s) | 457, 1317, 1375, 1387, 1582, 3025 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1303 |
| VpaK11BI | GGWCC | 8 cut(s) | 108, 172, 455, 979, 1284, 1294, 1826, 2626 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 179, 1917, 2237 |
| XapI | RAATTY | 8 cut(s) | 1153, 1487, 1962, 2065, 2105, 2200, 2590, 3035 |
| XbaI | TCTAGA | 1 cut(s) | 766 |
| XceI | RCATGY | 2 cut(s) | 1941, 2554 |
| XhoI | CTCGAG | 1 cut(s) | 30 |
| XmiI | GTMKAC | 1 cut(s) | 2922 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1010, 2253 |
| XspI | CTAG | 5 cut(s) | 767, 1710, 2445, 2763, 2807 |
| ZrmI | AGTACT | 2 cut(s) | 218, 2767 |