Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000385.1

Orthogroup ID

OG0006300

Physical Location & Seq

Genomic Coordinates Reverse (-)

19465 .. 24217

Gene Structure 4753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000385.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3081 bp

atgaagctggtggttcaagtgatgggggctcgagatctgccggcaatggatctaaacgggctgagtgatccgtacgtgaaggtgaagatgggaaagcagaagttcaagaccaaagtggtgaagaagacgttaaacccatattggggtgaagagttcacgtttcgagtcgacgacctcaacgacgagctcctcatctcttgtttggatgaagataagtacttcaacgacgacttcgtgggctgcgtcaaattccctgtttcccaagtcttcgatgcccccaacaagtgcctcgacacttgttggcaccctctccagcccaagagcaagaagcccaagcacaaggattgcggcgagattcttcttaatatctctctcagtacaaacaatgcattctccgactccgcttccgatggtgatcacatcaggagggattccgacattggaggtgaatcaccctcaaggttatccgaaacggcttcggcttcccctcagagaggcaagcttgatgaacttccattctccaaggaagataaagaaaaggaaaagactcttgcccagaaatcccttgctggccgacttgttcagatgttcaataaaaatcctgacgcacctccaatatcttcaaaccactctagcaaagctgacttgactgagcttgttgaaaccaaggccgacatttctgaggccacttattctgaggatcactcctcttgtgttccttttgaagagctaatgaaaacaatgcagttacgcgatcaggctactgaaacccccgagaacctaccgggtggagtgcttctagatcaaatgtatgttactgaacccaaacacctcaacactttactcttttcaccggattctacttttccaaaggcgttggcagacctgcatggaactacagaattggaacaaggaccctggaaatttgaaaacgacagcttaaaaagagtggttacatatgttaaggcagctagcaaattaatcaaggcttgcaaaggaagtgaggaccaaacatatctcaaagccgatgggaaagtttttgcagttttttcaagtgtaagcactcctgatgttccatatgggaaaacttttaggaccgagttgctctactgcattacacctgggcctgagctgccatcgggagaacaatctacacgctttgtaatatcctggcgcatgaattttctgcagagcaccatgatgaaaggaatgatagaaaatggagctcggcaaggtttaaaggacagttatgagcagtatgcaactttattatcgcagaacgttaagccagctgattccaaagaccttggatccaataaggaccaggttttggcatcattgcaggctgaatcccagtctgattggaagctggcagtacaatattttgctaatttcactgtggtctccacattttttattggattgtatatgctggtacacatctacctggctacacccagcactattcaagggttggagtttgttgggcttgacttgccagattcaattggtgaattcattgtttgtggtgtcctggtacttcaaggagaacgtgtactgggtttgatctcacgctttatgcaggccagagtgcagaaaggcagtgaccatggagtcaaagcccgaggagatggttggttgctaactgttgccttgattgaaggaagtaatatagcagctgtagattcaagtgggttctctgatccatacgtggtgttttcttgcaatggaaaagctagaactagctcaatcaagttccagaaatgcgaccctatgtggaacgaaatatttgagtttgatgcaatggatgagcctccttctgtgctggatgtggaaatttatgattttgatggtccttttgatgaagctacctctctgggccatgctgaaatcaattttgtgaaaaccaatatatcagatttagctgatatgtggattcctcttcaaggaaagttagctcaggcttgtcagtcaaaactccacttgagaatttttttaaacaatacaagaggtggcaatgttgttaatcactttttaaataagatggagaaggaggttggaaagaagattactgtacgttctcctcaaacaaattcagcattccaaaaactctttgggcttccaccagaggaatttcttatcaacgactttacatgtcacttgaaacgaaaaatgcccctgcagggccgcctatttctttctgcgagaataattgggttccatgcaaatttatttggtcgcaagacaaagttctttttcctctgggaggatatagaagatattcatattgttcctccaactctgtcatctatgggtagtccaactatagccatgactctgcggcaaggtagaggtatggatgcaaggcatggtgcaaagacacaggatgaggaaggcaggctgaagttccacttccagtccttcgtatccttcaatgtagcgaacaggacaattatggccctgtggaaggctagatctttgagtcctgagcagaaggtgcaaataatagaagaagaatcagaagtcaagatcctccaaactgaagagagtgggtctttcttgggccttgatgatgtcagcatgtctgaggtttattcatccttgcattcagttcctacaaatttcttcgcagagctattcggtggaggtgaattggatcgtagagttatggagaaagctggttgtcttaactattctcacaccccatgggaatcagagaagggcgatgtctatgtgaggcaaatatattacagatatgacaaacgtgtttcccaatatagaggagaggtgactagtactcagcaaaaatcccgcctttctgatagaaatggttggctttttcaagaagtcatgaccctccatgcaattccactcggtgactatttcaatgttcacatccgataccaaattgaggactcatcctcaacaccaccagggtgtctggtaaaagtatactttggcattgagtggctcaaaagcactaagcatcagaaaagaattacaaaaaatgttctcaagaatctgcaagatcgcctaaaggtctcctttgctgtagttgagaaggagttcacatcaagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 DUF4782 GRAM

Protein Analysis

1026

Amino Acids

115.48

Weight (kDa)

6.07

Isoelectric Point (pI)

47.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03370 AT1G03370
fragaria_vesca	FvH4_3g00230 FvH4_3g00230 FvH4_3g00230 FvH4_3g00230
malus_domestica	MD05G1362700.v1.1 MD10G1340200.v1.1
prunus_persica	Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1 Prupe.4G002600_v2.0.a1
pyrus_communis	pycom05g32910 pycom10g29010
rosa_chinensis	RchiOBHm_Chr5g0000311
rosa_laevigata	RLG00000030858
rosa_multiflora	Rmu_ssc0000385.1_g000007
rosa_roxburghii	Rroxscaffold_1G00075810
rosa_rugosa	Rorug04G0383000 Rorug04G0383100 Rorug04G0383100
rosa_samantha	Rh5AG002300 Rh5CG002600 Rh5DG002600
rosa_wichuraiana	Rw5G000280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1613
Acc36I	ACCTGC	1 cut(s)	894
AccB1I	GGYRCC	1 cut(s)	303
AccB7I	CCANNNNNTGG	1 cut(s)	1330
AccI	GTMKAC	2 cut(s)	168, 2952
AccII	CGCG	1 cut(s)	753
AciI	CCGC	5 cut(s)	348, 402, 2188, 2341, 2812
AclI	AACGTT	1 cut(s)	1281
AclWI	GGATC	8 cut(s)	57, 62, 708, 1305, 1318, 1697, 2524, 2664
AcoI	YGGCCR	1 cut(s)	571
AcuI	CTGAAG	2 cut(s)	2423, 2562
AdeI	CACNNNGTG	1 cut(s)	2876
AfaI	GTAC	9 cut(s)	74, 218, 379, 1377, 1437, 1539, 1557, 2076, 2797
AfiI	CCNNNNNNNGG	9 cut(s)	142, 143, 494, 1330, 1946, 2183, 2266, 2467, 2911
AflIII	ACRYGT	3 cut(s)	1552, 2153, 2764
AhlI	ACTAGT	1 cut(s)	2792
AjnI	CCWGG	7 cut(s)	917, 1120, 1169, 1323, 1446, 1533, 2932
AleI	CACNNNNGTG	1 cut(s)	2935
Alw21I	GWGCWC	3 cut(s)	189, 1196, 1228
Alw26I	GTCTC	2 cut(s)	1408, 3046
AlwI	GGATC	8 cut(s)	57, 62, 708, 1305, 1318, 1697, 2524, 2664
Ama87I	CYCGRG	3 cut(s)	30, 773, 1623
AoxI	GGCC	9 cut(s)	571, 669, 684, 1124, 1584, 1879, 2185, 2457, 2563
ApeKI	GCWGC	4 cut(s)	240, 968, 1132, 1676
AseI	ATTAAT	1 cut(s)	980
Asp700I	GAANNNNTTC	2 cut(s)	2280, 3065
AspLEI	GCGC	1 cut(s)	1176
AsuC2I	CCSGG	1 cut(s)	786
AsuNHI	GCTAGC	1 cut(s)	971
AvaI	CYCGRG	3 cut(s)	30, 773, 1623
AvaII	GGWCC	5 cut(s)	914, 1006, 1095, 1321, 1853
BamHI	GGATCC	1 cut(s)	1310
BanI	GGYRCC	1 cut(s)	303
BanII	GRGCYC	3 cut(s)	31, 189, 1228
BbsI	GAAGAC	2 cut(s)	131, 259
Bbv12I	GWGCWC	3 cut(s)	189, 1196, 1228
BbvI	GCAGC	4 cut(s)	227, 980, 1119, 1688
BccI	CCATC	8 cut(s)	16, 82, 404, 1022, 1144, 1625, 1844, 2038
BceAI	ACGGC	1 cut(s)	489
BciT130I	CCWGG	7 cut(s)	919, 1122, 1171, 1325, 1448, 1535, 2934
BciVI	GTATCC	1 cut(s)	2437
BclI	TGATCA	1 cut(s)	415
BcnI	CCSGG	1 cut(s)	786
BcoDI	GTCTC	2 cut(s)	1408, 3046
BcuI	ACTAGT	1 cut(s)	2792
BfaI	CTAG	7 cut(s)	633, 800, 972, 1737, 1743, 2472, 2793
BfmI	CTRYAG	6 cut(s)	897, 1187, 1680, 2180, 2325, 3051
BfuAI	ACCTGC	1 cut(s)	894
BfuI	GTATCC	1 cut(s)	2437
BglII	AGATCT	2 cut(s)	34, 2474
BisI	GCNGC	7 cut(s)	241, 349, 969, 1133, 1677, 2188, 2342
BlsI	GCNGC	7 cut(s)	242, 350, 970, 1134, 1678, 2189, 2343
BmcAI	AGTACT	2 cut(s)	218, 2797
Bme1390I	CCNGG	8 cut(s)	786, 919, 1122, 1171, 1325, 1448, 1535, 2934
Bme18I	GGWCC	5 cut(s)	914, 1006, 1095, 1321, 1853
BmeT110I	CYCGRG	3 cut(s)	30, 773, 1623
BmiI	GGNNCC	4 cut(s)	305, 916, 1312, 2219
BmrFI	CCNGG	8 cut(s)	786, 919, 1122, 1171, 1325, 1448, 1535, 2934
BmrI	ACTGGG	2 cut(s)	1348, 1568
BmsI	GCATC	5 cut(s)	262, 1343, 1789, 2350, 2995
BmtI	GCTAGC	1 cut(s)	975
BmuI	ACTGGG	2 cut(s)	1348, 1568
BpiI	GAAGAC	2 cut(s)	131, 259
BplI	GAGNNNNNCTC	2 cut(s)	689, 721
BpmI	CTGGAG	1 cut(s)	296
Bpu10I	CCTNAGC	3 cut(s)	1128, 1959, 2487
BpuEI	CTTGAG	3 cut(s)	442, 2005, 2999
BpuMI	CCSGG	1 cut(s)	786
BsaAI	YACGTR	2 cut(s)	76, 1711
BsaBI	GATNNNNATC	1 cut(s)	414
BsaI	GGTCTC	2 cut(s)	1408, 3046
BsaJI	CCNNGG	9 cut(s)	522, 666, 917, 1121, 1306, 1609, 1624, 2705, 2933
BsaWI	WCCGGW	1 cut(s)	853
BsaXI	ACNNNNNCTCC	2 cut(s)	1539, 1569
Bsc4I	CCNNNNNNNGG	9 cut(s)	142, 143, 494, 1330, 1946, 2183, 2266, 2467, 2911
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	3 cut(s)	1354, 1563, 2416
Bse3DI	GCAATG	5 cut(s)	51, 1337, 1732, 1809, 2023
Bse8I	GATNNNNATC	1 cut(s)	414
BseBI	CCWGG	7 cut(s)	919, 1122, 1171, 1325, 1448, 1535, 2934
BseDI	CCNNGG	9 cut(s)	522, 666, 917, 1121, 1306, 1609, 1624, 2705, 2933
BseGI	GGATG	8 cut(s)	211, 1813, 1834, 2365, 2392, 2597, 2895, 2918
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	9 cut(s)	142, 143, 494, 1330, 1946, 2183, 2266, 2467, 2911
BseMI	GCAATG	5 cut(s)	51, 1337, 1732, 1809, 2023
BseNI	ACTGG	3 cut(s)	1354, 1563, 2416
BseRI	GAGGAG	5 cut(s)	179, 697, 1641, 2073, 2796
BseXI	GCAGC	4 cut(s)	227, 980, 1119, 1688
BseYI	CCCAGC	1 cut(s)	1457
BsgI	GTGCAG	1 cut(s)	1613
Bsh1236I	CGCG	1 cut(s)	753
BshFI	GGCC	9 cut(s)	573, 671, 686, 1126, 1586, 1881, 2187, 2459, 2565
BshNI	GGYRCC	1 cut(s)	303
BsiHKAI	GWGCWC	3 cut(s)	189, 1196, 1228
BsiHKCI	CYCGRG	3 cut(s)	30, 773, 1623
BsiSI	CCGG	3 cut(s)	41, 785, 854
BsiWI	CGTACG	1 cut(s)	72
BslI	CCNNNNNNNGG	9 cut(s)	142, 143, 494, 1330, 1946, 2183, 2266, 2467, 2911
BsmAI	GTCTC	2 cut(s)	1408, 3046
BsmI	GAATGC	3 cut(s)	389, 2099, 2605
BsnI	GGCC	9 cut(s)	573, 671, 686, 1126, 1586, 1881, 2187, 2459, 2565
Bso31I	GGTCTC	2 cut(s)	1408, 3046
BsoBI	CYCGRG	3 cut(s)	30, 773, 1623
Bsp1286I	GDGCHC	4 cut(s)	31, 189, 1196, 1228
Bsp19I	CCATGG	2 cut(s)	1609, 2705
BspACI	CCGC	5 cut(s)	348, 402, 2188, 2341, 2812
BspANI	GGCC	9 cut(s)	573, 671, 686, 1126, 1586, 1881, 2187, 2459, 2565
BspFNI	CGCG	1 cut(s)	753
BspHI	TCATGA	1 cut(s)	2850
BspLI	GGNNCC	4 cut(s)	305, 916, 1312, 2219
BspMAI	CTGCAG	2 cut(s)	1191, 2184
BspMI	ACCTGC	1 cut(s)	894
BspOI	GCTAGC	1 cut(s)	975
BspPI	GGATC	8 cut(s)	57, 62, 708, 1305, 1318, 1697, 2524, 2664
BspQI	GCTCTTC	1 cut(s)	720
BspT107I	GGYRCC	1 cut(s)	303
BspTNI	GGTCTC	2 cut(s)	1408, 3046
BsrDI	GCAATG	5 cut(s)	51, 1337, 1732, 1809, 2023
BsrFI	RCCGGY	1 cut(s)	40
BsrI	ACTGG	3 cut(s)	1354, 1563, 2416
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	9 cut(s)	522, 666, 917, 1121, 1306, 1609, 1624, 2705, 2933
BssNAI	GTATAC	1 cut(s)	2953
BssT1I	CCWWGG	5 cut(s)	522, 666, 1306, 1609, 2705
Bst1107I	GTATAC	1 cut(s)	2953
Bst2UI	CCWGG	7 cut(s)	919, 1122, 1171, 1325, 1448, 1535, 2934
Bst4CI	ACNGT	4 cut(s)	1247, 1399, 1648, 2074
Bst6I	CTCTTC	4 cut(s)	144, 720, 1947, 2538
BstAPI	GCANNNNNTGC	1 cut(s)	2497
BstBAI	YACGTR	2 cut(s)	76, 1711
BstDSI	CCRYGG	2 cut(s)	1609, 2705
BstENI	CCTNNNNNAGG	4 cut(s)	492, 1944, 2264, 2465
BstF5I	GGATG	8 cut(s)	211, 1813, 1834, 2365, 2392, 2597, 2895, 2918
BstFNI	CGCG	1 cut(s)	753
BstHHI	GCGC	1 cut(s)	1176
BstMAI	GTCTC	2 cut(s)	1408, 3046
BstMWI	GCNNNNNNNGC	3 cut(s)	1132, 1495, 2497
BstNI	CCWGG	7 cut(s)	919, 1122, 1171, 1325, 1448, 1535, 2934
BstNSI	RCATGY	2 cut(s)	2157, 2584
BstSCI	CCNGG	8 cut(s)	784, 917, 1120, 1169, 1323, 1446, 1533, 2932
BstSFI	CTRYAG	6 cut(s)	897, 1187, 1680, 2180, 2325, 3051
BstUI	CGCG	1 cut(s)	753
BstV1I	GCAGC	4 cut(s)	227, 980, 1119, 1688
BstV2I	GAAGAC	2 cut(s)	131, 259
BstX2I	RGATCY	5 cut(s)	34, 49, 1310, 2474, 2529
BstYI	RGATCY	5 cut(s)	34, 49, 1310, 2474, 2529
BstZ17I	GTATAC	1 cut(s)	2953
BsuI	GTATCC	1 cut(s)	2437
BsuRI	GGCC	9 cut(s)	573, 671, 686, 1126, 1586, 1881, 2187, 2459, 2565
BtgI	CCRYGG	2 cut(s)	1609, 2705
BtgZI	GCGATG	1 cut(s)	2739
BtsCI	GGATG	8 cut(s)	211, 1813, 1834, 2365, 2392, 2597, 2895, 2918
BtsI	GCAGTG	1 cut(s)	1609
BtsIMutI	CAGTG	2 cut(s)	1395, 1609
BveI	ACCTGC	1 cut(s)	894
CciI	TCATGA	1 cut(s)	2850
CfoI	GCGC	1 cut(s)	1176
Cfr10I	RCCGGY	1 cut(s)	40
CseI	GACGC	2 cut(s)	232, 614
CsiI	ACCWGGT	1 cut(s)	1323
Csp6I	GTAC	9 cut(s)	73, 217, 378, 1376, 1436, 1538, 1556, 2075, 2796
CviQI	GTAC	9 cut(s)	73, 217, 378, 1376, 1436, 1538, 1556, 2075, 2796
DraI	TTTAAA	3 cut(s)	1239, 1998, 2037
DraIII	CACNNNGTG	1 cut(s)	2876
DrdI	GACNNNNNNGTC	1 cut(s)	1613
DseDI	GACNNNNNNGTC	1 cut(s)	1613
EaeI	YGGCCR	1 cut(s)	571
Eam1104I	CTCTTC	4 cut(s)	144, 720, 1947, 2538
EarI	CTCTTC	4 cut(s)	144, 720, 1947, 2538
Ecl136II	GAGCTC	2 cut(s)	187, 1226
Eco130I	CCWWGG	5 cut(s)	522, 666, 1306, 1609, 2705
Eco24I	GRGCYC	3 cut(s)	31, 189, 1228
Eco31I	GGTCTC	2 cut(s)	1408, 3046
Eco47I	GGWCC	5 cut(s)	914, 1006, 1095, 1321, 1853
Eco53kI	GAGCTC	2 cut(s)	187, 1226
Eco57I	CTGAAG	2 cut(s)	2423, 2562
Eco88I	CYCGRG	3 cut(s)	30, 773, 1623
EcoICRI	GAGCTC	2 cut(s)	187, 1226
EcoNI	CCTNNNNNAGG	4 cut(s)	492, 1944, 2264, 2465
EcoO109I	RGGNCCY	1 cut(s)	914
EcoRI	GAATTC	1 cut(s)	1514
EcoRII	CCWGG	7 cut(s)	917, 1120, 1169, 1323, 1446, 1533, 2932
EcoT14I	CCWWGG	5 cut(s)	522, 666, 1306, 1609, 2705
EcoT22I	ATGCAT	1 cut(s)	391
EcoT38I	GRGCYC	3 cut(s)	31, 189, 1228
ErhI	CCWWGG	5 cut(s)	522, 666, 1306, 1609, 2705
FalI	AAGNNNNNCTT	4 cut(s)	2396, 2428, 3029, 3061
FauI	CCCGC	1 cut(s)	2819
FauNDI	CATATG	2 cut(s)	958, 1078
FbaI	TGATCA	1 cut(s)	415
FblI	GTMKAC	2 cut(s)	168, 2952
Fnu4HI	GCNGC	7 cut(s)	241, 349, 969, 1133, 1677, 2188, 2342
FokI	GGATG	8 cut(s)	218, 1820, 1841, 2372, 2399, 2584, 2882, 2905
FriOI	GRGCYC	3 cut(s)	31, 189, 1228
Fsp4HI	GCNGC	7 cut(s)	241, 349, 969, 1133, 1677, 2188, 2342
FspBI	CTAG	7 cut(s)	633, 800, 972, 1737, 1743, 2472, 2793
GlaI	GCGC	1 cut(s)	1175
GluI	GCNGC	7 cut(s)	241, 349, 969, 1133, 1677, 2188, 2342
GsaI	CCCAGC	1 cut(s)	1461
GsuI	CTGGAG	1 cut(s)	296
HaeIII	GGCC	9 cut(s)	573, 671, 686, 1126, 1586, 1881, 2187, 2459, 2565
HapII	CCGG	3 cut(s)	41, 785, 854
HgaI	GACGC	2 cut(s)	232, 614
HhaI	GCGC	1 cut(s)	1176
Hin6I	GCGC	1 cut(s)	1174
HinP1I	GCGC	1 cut(s)	1174
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	3 cut(s)	41, 785, 854
Hpy166II	GTNNAC	7 cut(s)	156, 169, 1438, 1556, 2893, 2953, 3069
Hpy8I	GTNNAC	7 cut(s)	156, 169, 1438, 1556, 2893, 2953, 3069
Hpy99I	CGWCG	3 cut(s)	173, 185, 230
HpyCH4III	ACNGT	4 cut(s)	1247, 1399, 1648, 2074
HpyCH4IV	ACGT	8 cut(s)	75, 128, 158, 1281, 1552, 1710, 2077, 2764
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1132, 1495, 2497
HpySE526I	ACGT	8 cut(s)	75, 128, 158, 1281, 1552, 1710, 2077, 2764
HspAI	GCGC	1 cut(s)	1174
KroI	GCCGGC	1 cut(s)	40
KroNI	GCCGGC	1 cut(s)	42
Ksp22I	TGATCA	1 cut(s)	415
LguI	GCTCTTC	1 cut(s)	720
LmnI	GCTCC	2 cut(s)	192, 1223
Lsp1109I	GCAGC	4 cut(s)	227, 980, 1119, 1688
LweI	GCATC	5 cut(s)	262, 1343, 1789, 2350, 2995
MabI	ACCWGGT	1 cut(s)	1323
MaeI	CTAG	7 cut(s)	633, 800, 972, 1737, 1743, 2472, 2793
MaeII	ACGT	8 cut(s)	75, 128, 158, 1281, 1552, 1710, 2077, 2764
MaeIII	GTNAC	7 cut(s)	747, 814, 952, 1604, 2156, 2788, 2876
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	5 cut(s)	34, 49, 1310, 2474, 2529
MhlI	GDGCHC	4 cut(s)	31, 189, 1196, 1228
MlyI	GAGTC	7 cut(s)	174, 392, 541, 1623, 2329, 2491, 2909
MmeI	TCCRAC	6 cut(s)	420, 459, 1455, 2038, 2321, 2345
Mph1103I	ATGCAT	1 cut(s)	391
MroNI	GCCGGC	1 cut(s)	40
MroXI	GAANNNNTTC	2 cut(s)	2280, 3065
MslI	CAYNNNNRTG	2 cut(s)	1199, 2935
MspA1I	CMGCKG	2 cut(s)	1292, 1679
MspI	CCGG	3 cut(s)	41, 785, 854
MspR9I	CCNGG	8 cut(s)	786, 919, 1122, 1171, 1325, 1448, 1535, 2934
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	3 cut(s)	389, 2099, 2605
MvaI	CCWGG	7 cut(s)	919, 1122, 1171, 1325, 1448, 1535, 2934
MvnI	CGCG	1 cut(s)	753
MwoI	GCNNNNNNNGC	3 cut(s)	1132, 1495, 2497
NaeI	GCCGGC	1 cut(s)	42
NciI	CCSGG	1 cut(s)	786
NcoI	CCATGG	2 cut(s)	1609, 2705
NdeI	CATATG	2 cut(s)	958, 1078
NgoMIV	GCCGGC	1 cut(s)	40
NheI	GCTAGC	1 cut(s)	971
NlaIV	GGNNCC	4 cut(s)	305, 916, 1312, 2219
NmeAIII	GCCGAG	1 cut(s)	1207
NmuCI	GTSAC	4 cut(s)	1604, 2156, 2788, 2876
NsiI	ATGCAT	1 cut(s)	391
NspI	RCATGY	2 cut(s)	2157, 2584
OliI	CACNNNNGTG	1 cut(s)	2935
PaeR7I	CTCGAG	1 cut(s)	30
PagI	TCATGA	1 cut(s)	2850
PciI	ACATGT	1 cut(s)	2153
PciSI	GCTCTTC	1 cut(s)	720
PcsI	WCGNNNNNNNCGW	3 cut(s)	177, 231, 240
PctI	GAATGC	3 cut(s)	389, 2099, 2605
PdiI	GCCGGC	1 cut(s)	42
PdmI	GAANNNNTTC	2 cut(s)	2280, 3065
Pfl23II	CGTACG	1 cut(s)	72
PflMI	CCANNNNNTGG	1 cut(s)	1330
PkrI	GCNGC	7 cut(s)	242, 350, 970, 1134, 1678, 2189, 2343
PleI	GAGTC	7 cut(s)	173, 392, 541, 1622, 2329, 2490, 2909
PpsI	GAGTC	7 cut(s)	173, 392, 541, 1622, 2329, 2490, 2909
Ppu21I	YACGTR	2 cut(s)	76, 1711
PpuMI	RGGWCCY	1 cut(s)	914
PscI	ACATGT	1 cut(s)	2153
PshBI	ATTAAT	1 cut(s)	980
Psp124BI	GAGCTC	2 cut(s)	189, 1228
Psp1406I	AACGTT	1 cut(s)	1281
Psp5II	RGGWCCY	1 cut(s)	914
Psp6I	CCWGG	7 cut(s)	917, 1120, 1169, 1323, 1446, 1533, 2932
PspFI	CCCAGC	1 cut(s)	1457
PspGI	CCWGG	7 cut(s)	917, 1120, 1169, 1323, 1446, 1533, 2932
PspLI	CGTACG	1 cut(s)	72
PspN4I	GGNNCC	4 cut(s)	305, 916, 1312, 2219
PspPPI	RGGWCCY	1 cut(s)	914
PstI	CTGCAG	2 cut(s)	1191, 2184
PsuI	RGATCY	5 cut(s)	34, 49, 1310, 2474, 2529
PvuII	CAGCTG	2 cut(s)	1292, 1679
RsaI	GTAC	9 cut(s)	74, 218, 379, 1377, 1437, 1539, 1557, 2076, 2797
RsaNI	GTAC	9 cut(s)	73, 217, 378, 1376, 1436, 1538, 1556, 2075, 2796
RseI	CAYNNNNRTG	2 cut(s)	1199, 2935
SacI	GAGCTC	2 cut(s)	189, 1228
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	720
SatI	GCNGC	7 cut(s)	241, 349, 969, 1133, 1677, 2188, 2342
SbfI	CCTGCAGG	1 cut(s)	2184
ScaI	AGTACT	2 cut(s)	218, 2797
SchI	GAGTC	7 cut(s)	174, 392, 541, 1623, 2329, 2491, 2909
ScrFI	CCNGG	8 cut(s)	786, 919, 1122, 1171, 1325, 1448, 1535, 2934
SdaI	CCTGCAGG	1 cut(s)	2184
SduI	GDGCHC	4 cut(s)	31, 189, 1196, 1228
SexAI	ACCWGGT	1 cut(s)	1323
SfaNI	GCATC	5 cut(s)	262, 1343, 1789, 2350, 2995
SfcI	CTRYAG	6 cut(s)	897, 1187, 1680, 2180, 2325, 3051
Sfr274I	CTCGAG	1 cut(s)	30
SinI	GGWCC	5 cut(s)	914, 1006, 1095, 1321, 1853
SlaI	CTCGAG	1 cut(s)	30
SmiMI	CAYNNNNRTG	2 cut(s)	1199, 2935
SmlI	CTYRAG	4 cut(s)	30, 457, 1984, 3014
SmoI	CTYRAG	4 cut(s)	30, 457, 1984, 3014
SpeI	ACTAGT	1 cut(s)	2792
Sse8387I	CCTGCAGG	1 cut(s)	2184
SsiI	CCGC	5 cut(s)	348, 402, 2188, 2341, 2812
SspI	AATATT	2 cut(s)	1382, 1788
SspMI	CTAG	7 cut(s)	633, 800, 972, 1737, 1743, 2472, 2793
SstI	GAGCTC	2 cut(s)	189, 1228
StyD4I	CCNGG	8 cut(s)	784, 917, 1120, 1169, 1323, 1446, 1533, 2932
StyI	CCWWGG	5 cut(s)	522, 666, 1306, 1609, 2705
TaaI	ACNGT	4 cut(s)	1247, 1399, 1648, 2074
TaiI	ACGT	8 cut(s)	78, 131, 161, 1284, 1555, 1713, 2080, 2767
TaqI	TCGA	5 cut(s)	31, 163, 168, 270, 291
TaqII	GACCGA	1 cut(s)	1112
TatI	WGTACW	5 cut(s)	216, 377, 1375, 1555, 2795
TauI	GCSGC	3 cut(s)	351, 2190, 2344
TscAI	CASTG	2 cut(s)	1402, 1609
TseFI	GTSAC	4 cut(s)	1604, 2156, 2788, 2876
TseI	GCWGC	4 cut(s)	240, 968, 1132, 1676
Tsp45I	GTSAC	4 cut(s)	1604, 2156, 2788, 2876
TspGWI	ACGGA	1 cut(s)	60
TspRI	CASTG	2 cut(s)	1402, 1609
Van91I	CCANNNNNTGG	1 cut(s)	1330
VpaK11BI	GGWCC	5 cut(s)	914, 1006, 1095, 1321, 1853
VspI	ATTAAT	1 cut(s)	980
XagI	CCTNNNNNAGG	4 cut(s)	492, 1944, 2264, 2465
XbaI	TCTAGA	1 cut(s)	799
XceI	RCATGY	2 cut(s)	2157, 2584
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2111
XhoI	CTCGAG	1 cut(s)	30
XmiI	GTMKAC	2 cut(s)	168, 2952
XmnI	GAANNNNTTC	2 cut(s)	2280, 3065
XspI	CTAG	7 cut(s)	633, 800, 972, 1737, 1743, 2472, 2793
ZrmI	AGTACT	2 cut(s)	218, 2797
Zsp2I	ATGCAT	1 cut(s)	391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.