Anthocyanidin
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61720 |
| fragaria_vesca | FvH4_3g02980 |
| malus_domestica | MD05G1335600.v1.1 MD10G1311100.v1.1 |
| prunus_persica | Prupe.4G029700_v2.0.a1 |
| pyrus_communis | pycom05g30700 pycom10g26230 |
| rosa_chinensis | RchiOBHm_Chr5g0004611 |
| rosa_multiflora | Rmu_co8004590.1_g000001 Rmu_co8462841.1_g000001 Rmu_sc0003758.1_g000017 Rmu_sc0009128.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00070930 |
| rosa_rugosa | Rorug04G0412500 |
| rosa_samantha | Rh5AG040600 Rh5BG040200 Rh5BG040300 Rh5CG044000 Rh5DG039900 |
| rosa_wichuraiana | Rw5G003900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 245 |
| AatII | GACGTC | 1 cut(s) | 1302 |
| Acc36I | ACCTGC | 1 cut(s) | 908 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 778, 1663 |
| AccBSI | CCGCTC | 1 cut(s) | 414 |
| AccII | CGCG | 1 cut(s) | 1056 |
| AciI | CCGC | 3 cut(s) | 5, 414, 637 |
| AclI | AACGTT | 1 cut(s) | 1017 |
| AclWI | GGATC | 4 cut(s) | 367, 771, 789, 1582 |
| AcsI | RAATTY | 5 cut(s) | 271, 369, 524, 867, 1223 |
| AcuI | CTGAAG | 2 cut(s) | 104, 396 |
| AcyI | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| AfaI | GTAC | 4 cut(s) | 11, 1159, 1541, 1634 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 778, 917, 1178, 1371, 1597, 1663 |
| AflII | CTTAAG | 1 cut(s) | 103 |
| AflIII | ACRYGT | 2 cut(s) | 1054, 1408 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 102, 134 |
| AlwI | GGATC | 4 cut(s) | 367, 771, 789, 1582 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 584, 1079 |
| Ama87I | CYCGRG | 1 cut(s) | 505 |
| AoxI | GGCC | 5 cut(s) | 85, 509, 558, 1315, 1578 |
| ApeKI | GCWGC | 6 cut(s) | 875, 1076, 1079, 1479, 1687, 1690 |
| ApoI | RAATTY | 5 cut(s) | 271, 369, 524, 867, 1223 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 23, 384 |
| AspLEI | GCGC | 2 cut(s) | 402, 1484 |
| AspS9I | GGNCC | 5 cut(s) | 86, 287, 558, 740, 970 |
| AsuC2I | CCSGG | 2 cut(s) | 797, 1427 |
| AsuHPI | GGTGA | 4 cut(s) | 269, 760, 824, 869 |
| AvaI | CYCGRG | 1 cut(s) | 505 |
| AvaII | GGWCC | 3 cut(s) | 287, 740, 970 |
| BanII | GRGCYC | 1 cut(s) | 1432 |
| BbsI | GAAGAC | 3 cut(s) | 45, 689, 1217 |
| BbvCI | CCTCAGC | 1 cut(s) | 292 |
| BbvI | GCAGC | 6 cut(s) | 887, 1066, 1088, 1466, 1674, 1677 |
| BccI | CCATC | 3 cut(s) | 9, 149, 772 |
| BclI | TGATCA | 1 cut(s) | 987 |
| BcnI | CCSGG | 2 cut(s) | 797, 1427 |
| BfaI | CTAG | 4 cut(s) | 863, 1202, 1319, 1699 |
| BfmI | CTRYAG | 2 cut(s) | 1080, 1691 |
| BfrI | CTTAAG | 1 cut(s) | 103 |
| BfuAI | ACCTGC | 1 cut(s) | 908 |
| BglII | AGATCT | 2 cut(s) | 825, 880 |
| BisI | GCNGC | 7 cut(s) | 6, 876, 1077, 1080, 1480, 1688, 1691 |
| BlsI | GCNGC | 7 cut(s) | 7, 877, 1078, 1081, 1481, 1689, 1692 |
| BmcAI | AGTACT | 1 cut(s) | 1159 |
| Bme1390I | CCNGG | 2 cut(s) | 797, 1427 |
| Bme18I | GGWCC | 3 cut(s) | 287, 740, 970 |
| BmeT110I | CYCGRG | 1 cut(s) | 505 |
| BmgT120I | GGNCC | 5 cut(s) | 86, 287, 558, 740, 970 |
| BmiI | GGNNCC | 5 cut(s) | 88, 178, 289, 493, 972 |
| BmrFI | CCNGG | 2 cut(s) | 797, 1427 |
| BmrI | ACTGGG | 1 cut(s) | 271 |
| BmsI | GCATC | 6 cut(s) | 180, 557, 592, 707, 895, 1365 |
| BmuI | ACTGGG | 1 cut(s) | 271 |
| BpiI | GAAGAC | 3 cut(s) | 45, 689, 1217 |
| BpmI | CTGGAG | 3 cut(s) | 192, 806, 1278 |
| Bpu10I | CCTNAGC | 3 cut(s) | 292, 1503, 1680 |
| BpuEI | CTTGAG | 1 cut(s) | 1174 |
| BpuMI | CCSGG | 2 cut(s) | 797, 1427 |
| BsaBI | GATNNNNATC | 1 cut(s) | 540 |
| BsaHI | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| BsaJI | CCNNGG | 4 cut(s) | 138, 506, 796, 966 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 483, 513, 947, 977 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 778, 917, 1178, 1371, 1597, 1663 |
| Bse1I | ACTGG | 2 cut(s) | 259, 266 |
| Bse8I | GATNNNNATC | 1 cut(s) | 540 |
| BseDI | CCNNGG | 4 cut(s) | 138, 506, 796, 966 |
| BseGI | GGATG | 3 cut(s) | 1260, 1380, 1423 |
| BseJI | GATNNNNATC | 1 cut(s) | 540 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 778, 917, 1178, 1371, 1597, 1663 |
| BseMII | CTCAG | 8 cut(s) | 306, 380, 449, 966, 1437, 1494, 1527, 1545 |
| BseNI | ACTGG | 2 cut(s) | 259, 266 |
| BseXI | GCAGC | 6 cut(s) | 887, 1066, 1088, 1466, 1674, 1677 |
| BseYI | CCCAGC | 1 cut(s) | 1304 |
| Bsh1236I | CGCG | 1 cut(s) | 1056 |
| BshFI | GGCC | 5 cut(s) | 87, 511, 560, 1317, 1580 |
| BsiHKCI | CYCGRG | 1 cut(s) | 505 |
| BsiSI | CCGG | 2 cut(s) | 796, 1426 |
| BslFI | GGGAC | 5 cut(s) | 273, 488, 813, 1286, 1532 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 778, 917, 1178, 1371, 1597, 1663 |
| BsmFI | GGGAC | 5 cut(s) | 273, 488, 813, 1286, 1532 |
| BsnI | GGCC | 5 cut(s) | 87, 511, 560, 1317, 1580 |
| BsoBI | CYCGRG | 1 cut(s) | 505 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1432 |
| BspACI | CCGC | 3 cut(s) | 5, 414, 637 |
| BspANI | GGCC | 5 cut(s) | 87, 511, 560, 1317, 1580 |
| BspCNI | CTCAG | 8 cut(s) | 305, 381, 448, 967, 1438, 1495, 1528, 1546 |
| BspFNI | CGCG | 1 cut(s) | 1056 |
| BspLI | GGNNCC | 5 cut(s) | 88, 178, 289, 493, 972 |
| BspMAI | CTGCAG | 2 cut(s) | 1084, 1695 |
| BspMI | ACCTGC | 1 cut(s) | 908 |
| BspPI | GGATC | 4 cut(s) | 367, 771, 789, 1582 |
| BspTI | CTTAAG | 1 cut(s) | 103 |
| BsrBI | CCGCTC | 1 cut(s) | 414 |
| BsrI | ACTGG | 2 cut(s) | 259, 266 |
| BssECI | CCNNGG | 4 cut(s) | 138, 506, 796, 966 |
| BssNI | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| Bst4CI | ACNGT | 5 cut(s) | 44, 735, 1048, 1258, 1386 |
| Bst6I | CTCTTC | 2 cut(s) | 390, 1600 |
| BstACI | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| BstAFI | CTTAAG | 1 cut(s) | 103 |
| BstC8I | GCNNGC | 3 cut(s) | 639, 1030, 1509 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstF5I | GGATG | 3 cut(s) | 1260, 1380, 1423 |
| BstFNI | CGCG | 1 cut(s) | 1056 |
| BstHHI | GCGC | 2 cut(s) | 402, 1484 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 491, 914, 1314 |
| BstNSI | RCATGY | 2 cut(s) | 1032, 1412 |
| BstSCI | CCNGG | 2 cut(s) | 795, 1425 |
| BstSFI | CTRYAG | 2 cut(s) | 1080, 1691 |
| BstUI | CGCG | 1 cut(s) | 1056 |
| BstV1I | GCAGC | 6 cut(s) | 887, 1066, 1088, 1466, 1674, 1677 |
| BstV2I | GAAGAC | 3 cut(s) | 45, 689, 1217 |
| BstX2I | RGATCY | 4 cut(s) | 359, 781, 825, 880 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1176 |
| BstYI | RGATCY | 4 cut(s) | 359, 781, 825, 880 |
| BsuRI | GGCC | 5 cut(s) | 87, 511, 560, 1317, 1580 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtsCI | GGATG | 3 cut(s) | 1260, 1380, 1423 |
| BtsI | GCAGTG | 1 cut(s) | 1089 |
| BtsIMutI | CAGTG | 3 cut(s) | 252, 1089, 1551 |
| BveI | ACCTGC | 1 cut(s) | 908 |
| Cac8I | GCNNGC | 3 cut(s) | 639, 1030, 1509 |
| CaiI | CAGNNNCTG | 2 cut(s) | 584, 1079 |
| CfoI | GCGC | 2 cut(s) | 402, 1484 |
| Cfr13I | GGNCC | 5 cut(s) | 86, 287, 558, 740, 970 |
| CseI | GACGC | 2 cut(s) | 58, 656 |
| Csp6I | GTAC | 4 cut(s) | 10, 1158, 1540, 1633 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1540, 1575 |
| CviAII | CATG | 9 cut(s) | 236, 589, 688, 938, 985, 1029, 1324, 1361, 1409 |
| CviQI | GTAC | 4 cut(s) | 10, 1158, 1540, 1633 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 245 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 245 |
| Eam1104I | CTCTTC | 2 cut(s) | 390, 1600 |
| EarI | CTCTTC | 2 cut(s) | 390, 1600 |
| Eco24I | GRGCYC | 1 cut(s) | 1432 |
| Eco47I | GGWCC | 3 cut(s) | 287, 740, 970 |
| Eco57I | CTGAAG | 2 cut(s) | 104, 396 |
| Eco88I | CYCGRG | 1 cut(s) | 505 |
| EcoO109I | RGGNCCY | 3 cut(s) | 86, 287, 970 |
| EcoRI | GAATTC | 1 cut(s) | 369 |
| EcoT38I | GRGCYC | 1 cut(s) | 1432 |
| FaeI | CATG | 9 cut(s) | 239, 592, 691, 941, 988, 1032, 1327, 1364, 1412 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 369, 401 |
| FaqI | GGGAC | 5 cut(s) | 273, 488, 813, 1286, 1532 |
| FatI | CATG | 9 cut(s) | 235, 588, 687, 937, 984, 1028, 1323, 1360, 1408 |
| FauI | CCCGC | 1 cut(s) | 630 |
| FbaI | TGATCA | 1 cut(s) | 987 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 876, 1077, 1080, 1480, 1688, 1691 |
| FokI | GGATG | 3 cut(s) | 1247, 1387, 1430 |
| FriOI | GRGCYC | 1 cut(s) | 1432 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 876, 1077, 1080, 1480, 1688, 1691 |
| FspBI | CTAG | 4 cut(s) | 863, 1202, 1319, 1699 |
| GlaI | GCGC | 2 cut(s) | 401, 1483 |
| GluI | GCNGC | 7 cut(s) | 6, 876, 1077, 1080, 1480, 1688, 1691 |
| GsaI | CCCAGC | 1 cut(s) | 1308 |
| GsuI | CTGGAG | 3 cut(s) | 192, 806, 1278 |
| HaeIII | GGCC | 5 cut(s) | 87, 511, 560, 1317, 1580 |
| HapII | CCGG | 2 cut(s) | 796, 1426 |
| HgaI | GACGC | 2 cut(s) | 58, 656 |
| HhaI | GCGC | 2 cut(s) | 402, 1484 |
| Hin1I | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| Hin1II | CATG | 9 cut(s) | 239, 592, 691, 941, 988, 1032, 1327, 1364, 1412 |
| Hin6I | GCGC | 2 cut(s) | 400, 1482 |
| HinP1I | GCGC | 2 cut(s) | 400, 1482 |
| HincII | GTYRAC | 1 cut(s) | 955 |
| HindII | GTYRAC | 1 cut(s) | 955 |
| HindIII | AAGCTT | 2 cut(s) | 805, 1604 |
| HinfI | GANTC | 4 cut(s) | 134, 629, 751, 1454 |
| HpaII | CCGG | 2 cut(s) | 796, 1426 |
| HphI | GGTGA | 4 cut(s) | 269, 760, 824, 869 |
| Hpy166II | GTNNAC | 4 cut(s) | 620, 860, 955, 1666 |
| Hpy188I | TCNGA | 8 cut(s) | 390, 463, 523, 718, 819, 967, 1023, 1600 |
| Hpy8I | GTNNAC | 4 cut(s) | 620, 860, 955, 1666 |
| Hpy99I | CGWCG | 1 cut(s) | 32 |
| HpyAV | CCTTC | 4 cut(s) | 128, 549, 887, 1275 |
| HpyCH4III | ACNGT | 5 cut(s) | 44, 735, 1048, 1258, 1386 |
| HpyCH4IV | ACGT | 3 cut(s) | 498, 1017, 1299 |
| HpyCH4V | TGCA | 6 cut(s) | 443, 1082, 1163, 1378, 1511, 1693 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 491, 914, 1314 |
| HpySE526I | ACGT | 3 cut(s) | 498, 1017, 1299 |
| Hsp92I | GRCGYC | 3 cut(s) | 69, 667, 1299 |
| Hsp92II | CATG | 9 cut(s) | 239, 592, 691, 941, 988, 1032, 1327, 1364, 1412 |
| HspAI | GCGC | 2 cut(s) | 400, 1482 |
| Ksp22I | TGATCA | 1 cut(s) | 987 |
| LmnI | GCTCC | 2 cut(s) | 491, 897 |
| Lsp1109I | GCAGC | 6 cut(s) | 887, 1066, 1088, 1466, 1674, 1677 |
| LweI | GCATC | 6 cut(s) | 180, 557, 592, 707, 895, 1365 |
| MaeI | CTAG | 4 cut(s) | 863, 1202, 1319, 1699 |
| MaeII | ACGT | 3 cut(s) | 498, 1017, 1299 |
| MaeIII | GTNAC | 5 cut(s) | 70, 214, 257, 923, 1117 |
| MbiI | CCGCTC | 1 cut(s) | 414 |
| MflI | RGATCY | 4 cut(s) | 359, 781, 825, 880 |
| MhlI | GDGCHC | 1 cut(s) | 1432 |
| MluCI | AATT | 8 cut(s) | 271, 369, 405, 524, 648, 867, 1223, 1332 |
| MluI | ACGCGT | 1 cut(s) | 1054 |
| MlyI | GAGTC | 1 cut(s) | 143 |
| MroXI | GAANNNNTTC | 2 cut(s) | 23, 384 |
| MslI | CAYNNNNRTG | 4 cut(s) | 77, 234, 593, 718 |
| MspA1I | CMGCKG | 1 cut(s) | 1079 |
| MspCI | CTTAAG | 1 cut(s) | 103 |
| MspI | CCGG | 2 cut(s) | 796, 1426 |
| MspR9I | CCNGG | 2 cut(s) | 797, 1427 |
| MvnI | CGCG | 1 cut(s) | 1056 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 491, 914, 1314 |
| NciI | CCSGG | 2 cut(s) | 797, 1427 |
| NlaIII | CATG | 9 cut(s) | 239, 592, 691, 941, 988, 1032, 1327, 1364, 1412 |
| NlaIV | GGNNCC | 5 cut(s) | 88, 178, 289, 493, 972 |
| NmeAIII | GCCGAG | 2 cut(s) | 586, 1231 |
| NmuCI | GTSAC | 5 cut(s) | 70, 214, 257, 923, 1117 |
| NspI | RCATGY | 2 cut(s) | 1032, 1412 |
| PacI | TTAATTAA | 1 cut(s) | 408 |
| PaeI | GCATGC | 1 cut(s) | 1032 |
| PciI | ACATGT | 1 cut(s) | 1408 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 33 |
| PdmI | GAANNNNTTC | 2 cut(s) | 23, 384 |
| PfeI | GAWTC | 3 cut(s) | 629, 751, 1454 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 778, 1663 |
| PkrI | GCNGC | 7 cut(s) | 7, 877, 1078, 1081, 1481, 1689, 1692 |
| PleI | GAGTC | 1 cut(s) | 142 |
| PpsI | GAGTC | 1 cut(s) | 142 |
| PpuMI | RGGWCCY | 2 cut(s) | 287, 970 |
| PscI | ACATGT | 1 cut(s) | 1408 |
| Psp1406I | AACGTT | 1 cut(s) | 1017 |
| Psp5II | RGGWCCY | 2 cut(s) | 287, 970 |
| PspFI | CCCAGC | 1 cut(s) | 1304 |
| PspN4I | GGNNCC | 5 cut(s) | 88, 178, 289, 493, 972 |
| PspPI | GGNCC | 5 cut(s) | 86, 287, 558, 740, 970 |
| PspPPI | RGGWCCY | 2 cut(s) | 287, 970 |
| PstI | CTGCAG | 2 cut(s) | 1084, 1695 |
| PstNI | CAGNNNCTG | 2 cut(s) | 584, 1079 |
| PsuI | RGATCY | 4 cut(s) | 359, 781, 825, 880 |
| PvuII | CAGCTG | 1 cut(s) | 1079 |
| RsaI | GTAC | 4 cut(s) | 11, 1159, 1541, 1634 |
| RsaNI | GTAC | 4 cut(s) | 10, 1158, 1540, 1633 |
| RseI | CAYNNNNRTG | 4 cut(s) | 77, 234, 593, 718 |
| SatI | GCNGC | 7 cut(s) | 6, 876, 1077, 1080, 1480, 1688, 1691 |
| Sau96I | GGNCC | 5 cut(s) | 86, 287, 558, 740, 970 |
| ScaI | AGTACT | 1 cut(s) | 1159 |
| SchI | GAGTC | 1 cut(s) | 143 |
| ScrFI | CCNGG | 2 cut(s) | 797, 1427 |
| SduI | GDGCHC | 1 cut(s) | 1432 |
| SfaNI | GCATC | 6 cut(s) | 180, 557, 592, 707, 895, 1365 |
| SfcI | CTRYAG | 2 cut(s) | 1080, 1691 |
| SinI | GGWCC | 3 cut(s) | 287, 740, 970 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 77, 234, 593, 718 |
| SmlI | CTYRAG | 2 cut(s) | 103, 1153 |
| SmoI | CTYRAG | 2 cut(s) | 103, 1153 |
| SphI | GCATGC | 1 cut(s) | 1032 |
| Sse9I | AATT | 8 cut(s) | 271, 369, 405, 524, 648, 867, 1223, 1332 |
| SsiI | CCGC | 3 cut(s) | 5, 414, 637 |
| SspMI | CTAG | 4 cut(s) | 863, 1202, 1319, 1699 |
| StyD4I | CCNGG | 2 cut(s) | 795, 1425 |
| TaaI | ACNGT | 5 cut(s) | 44, 735, 1048, 1258, 1386 |
| TaiI | ACGT | 3 cut(s) | 501, 1020, 1302 |
| TaqI | TCGA | 5 cut(s) | 27, 58, 345, 1088, 1146 |
| TasI | AATT | 8 cut(s) | 271, 369, 405, 524, 648, 867, 1223, 1332 |
| TatI | WGTACW | 2 cut(s) | 1157, 1539 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 3 cut(s) | 629, 751, 1454 |
| TscAI | CASTG | 3 cut(s) | 259, 1089, 1558 |
| TseFI | GTSAC | 5 cut(s) | 70, 214, 257, 923, 1117 |
| TseI | GCWGC | 6 cut(s) | 875, 1076, 1079, 1479, 1687, 1690 |
| Tsp45I | GTSAC | 5 cut(s) | 70, 214, 257, 923, 1117 |
| TspDTI | ATGAA | 1 cut(s) | 906 |
| TspGWI | ACGGA | 2 cut(s) | 89, 127 |
| TspRI | CASTG | 3 cut(s) | 259, 1089, 1558 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 778, 1663 |
| Vha464I | CTTAAG | 1 cut(s) | 103 |
| VpaK11BI | GGWCC | 3 cut(s) | 287, 740, 970 |
| XapI | RAATTY | 5 cut(s) | 271, 369, 524, 867, 1223 |
| XceI | RCATGY | 2 cut(s) | 1032, 1412 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1408 |
| XmnI | GAANNNNTTC | 2 cut(s) | 23, 384 |
| XspI | CTAG | 4 cut(s) | 863, 1202, 1319, 1699 |
| ZraI | GACGTC | 1 cut(s) | 1300 |
| ZrmI | AGTACT | 1 cut(s) | 1159 |