Prupe.4G040900_v2.0.a1
NAC Family

NAC transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1927075 .. 1929036
1962 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G040900.1

Sequence Viewer

Length: 1122 bp
ATGGAGAGCACAGATTCATCATCGGGTTCACAAGCACACCCCCAGCTGCCACCCGGGTTCCGGTTCCACCCGACCGATGAAGAGCTGGTGGTCCATTATCTCAAGAAAAAGGCCGCCTCCGCTCCTCTACCGGTCACCATCATCGCCGAGGTGGACTTGTACAAGTTTGATCCATGGGAGCTACCAAGCAAGGCGACGTTTGGGGAGCAAGAGTGGTATTTTTTCAGTCCAAGAGACCGGAAGTACCCGAATGGGGCAAGGCCTAACAGAGCGGCAACGTCAGGTTATTGGAAGGCCACGGGCACCGATAAGCCTATTCTAACATCCATTGGAAACCAAAAGGTCGGCGTTAAAAAAGCTCTGGTTTTCTATGGTGGCAAGCCCCCAAAAGGGATCAAGTCCAATTGGATCATGCACGAGTATCGCCTAGTCAACAACAACAACAACTTTTCTAAGCCTCCTGATGCATCCAACAAAAAAGCCTCTTTAAGGCTTGATGATTGGGTTTTGTGTCGGATTTATAAGAAAAACAATGCGCAGAGGCCTATGATGGACGAGGATTCTTCCAACAATTCAATGGACGGTATGTTTGCCCACCCGTCATCAATATTGCCAGCTCCGCCACCGCCACCGCCGCAGCCAAAGCACACTACAAACTACACGGCGTTGCTCGAAAACGATGATCACGAGGGTTTTTTCGAGGGTATATTATCGTCAAATGATCAACAAGGCTCTCACTCTCATCATCATCATCAGCATCATCAGCATCATCAGCATCATCATGATCAGTTTGGTGGTATATCTACTTCAAGCTCAAAAAGTAACCTGCCCGTGAAACGTCCACTTTCATCGTCGTTTTGGAACGATGCGGGATCGATGGGGACTGCTGCTGCTGCTGCTACTACAAGTTCATCGAGCAAAAGGTTTCATGCTGATCTCAACAGTGGTATTAGCGCCACTGCTGCAGGTGGGGTTGATGAAAGCAACTCCTCCTTTGTTTCTATGCTAAACCAGCTCCCACAGGGTACGGCGCCGTTTCACTCTAATGCACTTCTTGGGTCCCTCGGAGATGGGGTTTTGCGCCAACAATTTCAACACCCAAGTATGAATTGGAATTCATAG

Protein Analysis

374

Amino Acids

41.07

Weight (kDa)

8.45

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010797)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 522
AarI CACCTGC 1 cut(s) 956
Acc16I TGCGCA 1 cut(s) 537
Acc36I ACCTGC 2 cut(s) 834, 956
AccB1I GGYRCC 2 cut(s) 302, 1030
AccBSI CCGCTC 2 cut(s) 122, 272
AciI CCGC 8 cut(s) 114, 120, 272, 620, 626, 632, 635, 869
AclWI GGATC 4 cut(s) 164, 401, 416, 880
AcsI RAATTY 1 cut(s) 1114
AcyI GRCGYC 1 cut(s) 1031
AfaI GTAC 3 cut(s) 161, 245, 1027
AfiI CCNNNNNNNGG 5 cut(s) 60, 253, 389, 390, 489
AgeI ACCGGT 1 cut(s) 130
AgsI TTSAA 3 cut(s) 576, 810, 1094
AluBI AGCT 7 cut(s) 46, 85, 181, 359, 617, 813, 1015
AluI AGCT 7 cut(s) 46, 85, 181, 359, 617, 813, 1015
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 1 cut(s) 228
AlwI GGATC 4 cut(s) 164, 401, 416, 880
Ama87I CYCGRG 1 cut(s) 53
AoxI GGCC 4 cut(s) 111, 260, 294, 542
ApeKI GCWGC 7 cut(s) 46, 637, 887, 890, 893, 896, 962
ApoI RAATTY 1 cut(s) 1114
ArsI GACNNNNNNTTYG 2 cut(s) 572, 604
AsiGI ACCGGT 1 cut(s) 130
AspLEI GCGC 4 cut(s) 538, 956, 1033, 1083
AspS9I GGNCC 2 cut(s) 91, 1059
AsuC2I CCSGG 2 cut(s) 54, 55
AsuHPI GGTGA 1 cut(s) 127
AvaI CYCGRG 1 cut(s) 53
AvaII GGWCC 2 cut(s) 91, 1059
BaeGI GKGCMC 1 cut(s) 305
BanI GGYRCC 2 cut(s) 302, 1030
BarI GAAGNNNNNNTAC 2 cut(s) 790, 822
BauI CACGAG 2 cut(s) 416, 686
Bbv12I GWGCWC 1 cut(s) 11
BbvI GCAGC 7 cut(s) 33, 649, 874, 877, 880, 883, 949
BccI CCATC 4 cut(s) 146, 544, 871, 1064
BceAI ACGGC 3 cut(s) 678, 1018, 1044
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BclI TGATCA 3 cut(s) 682, 721, 784
BcnI CCSGG 2 cut(s) 54, 55
BcoDI GTCTC 1 cut(s) 228
BfaI CTAG 1 cut(s) 428
BfmI CTRYAG 1 cut(s) 963
BfoI RGCGCY 2 cut(s) 957, 1034
BfuAI ACCTGC 2 cut(s) 834, 956
Bme1390I CCNGG 2 cut(s) 54, 55
Bme18I GGWCC 2 cut(s) 91, 1059
BmeT110I CYCGRG 1 cut(s) 53
BmgT120I GGNCC 2 cut(s) 91, 1059
BmiI GGNNCC 6 cut(s) 59, 65, 304, 1032, 1060, 1061
BmrFI CCNGG 2 cut(s) 54, 55
BmsI GCATC 6 cut(s) 454, 476, 766, 775, 784, 856
BpuEI CTTGAG 1 cut(s) 86
BpuMI CCSGG 2 cut(s) 54, 55
Bsa29I ATCGAT 1 cut(s) 875
BsaHI GRCGYC 1 cut(s) 1031
BsaI GGTCTC 1 cut(s) 228
BsaJI CCNNGG 5 cut(s) 53, 147, 173, 297, 1063
BsaWI WCCGGW 3 cut(s) 60, 130, 237
BsaXI ACNNNNNCTCC 4 cut(s) 197, 227, 1059, 1089
Bsc4I CCNNNNNNNGG 5 cut(s) 60, 253, 389, 390, 489
Bse118I RCCGGY 1 cut(s) 130
BseCI ATCGAT 1 cut(s) 875
BseDI CCNNGG 5 cut(s) 53, 147, 173, 297, 1063
BseGI GGATG 2 cut(s) 323, 467
BseLI CCNNNNNNNGG 5 cut(s) 60, 253, 389, 390, 489
BseRI GAGGAG 2 cut(s) 114, 979
BseSI GKGCMC 1 cut(s) 305
BseXI GCAGC 7 cut(s) 33, 649, 874, 877, 880, 883, 949
BseYI CCCAGC 1 cut(s) 42
Bsh1285I CGRYCG 1 cut(s) 75
BshFI GGCC 4 cut(s) 113, 262, 296, 544
BshNI GGYRCC 2 cut(s) 302, 1030
BshTI ACCGGT 1 cut(s) 130
BshVI ATCGAT 1 cut(s) 875
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 11
BsiHKCI CYCGRG 1 cut(s) 53
BsiSI CCGG 4 cut(s) 54, 61, 131, 238
BslFI GGGAC 2 cut(s) 895, 1045
BslI CCNNNNNNNGG 5 cut(s) 60, 253, 389, 390, 489
BsmAI GTCTC 1 cut(s) 228
BsmFI GGGAC 2 cut(s) 895, 1045
BsnI GGCC 4 cut(s) 113, 262, 296, 544
Bso31I GGTCTC 1 cut(s) 228
BsoBI CYCGRG 1 cut(s) 53
Bsp1286I GDGCHC 2 cut(s) 11, 305
Bsp1407I TGTACA 1 cut(s) 159
Bsp143I GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
Bsp19I CCATGG 1 cut(s) 173
BspACI CCGC 8 cut(s) 114, 120, 272, 620, 626, 632, 635, 869
BspANI GGCC 4 cut(s) 113, 262, 296, 544
BspDI ATCGAT 1 cut(s) 875
BspHI TCATGA 1 cut(s) 781
BspLI GGNNCC 6 cut(s) 59, 65, 304, 1032, 1060, 1061
BspMAI CTGCAG 1 cut(s) 967
BspMI ACCTGC 2 cut(s) 834, 956
BspPI GGATC 4 cut(s) 164, 401, 416, 880
BspQI GCTCTTC 1 cut(s) 75
BspT107I GGYRCC 2 cut(s) 302, 1030
BspTNI GGTCTC 1 cut(s) 228
BsrBI CCGCTC 2 cut(s) 122, 272
BsrFI RCCGGY 1 cut(s) 130
BsrGI TGTACA 1 cut(s) 159
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 5 cut(s) 53, 147, 173, 297, 1063
BssMI GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
BssNI GRCGYC 1 cut(s) 1031
BssSI CACGAG 2 cut(s) 416, 686
BssT1I CCWWGG 1 cut(s) 173
Bst2BI CACGAG 2 cut(s) 416, 686
Bst4CI ACNGT 2 cut(s) 584, 944
Bst6I CTCTTC 1 cut(s) 75
BstACI GRCGYC 1 cut(s) 1031
BstAUI TGTACA 1 cut(s) 159
BstC8I GCNNGC 2 cut(s) 380, 615
BstDEI CTNAG 1 cut(s) 453
BstDSI CCRYGG 2 cut(s) 173, 297
BstEII GGTNACC 1 cut(s) 133
BstENI CCTNNNNNAGG 1 cut(s) 487
BstF5I GGATG 2 cut(s) 323, 467
BstH2I RGCGCY 2 cut(s) 957, 1034
BstHHI GCGC 4 cut(s) 538, 956, 1033, 1083
BstKTI GATC 8 cut(s) 172, 396, 411, 685, 724, 787, 875, 937
BstMAI GTCTC 1 cut(s) 228
BstMBI GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
BstMCI CGRYCG 1 cut(s) 75
BstPI GGTNACC 1 cut(s) 133
BstSCI CCNGG 2 cut(s) 52, 53
BstSFI CTRYAG 1 cut(s) 963
BstSLI GKGCMC 1 cut(s) 305
BstV1I GCAGC 7 cut(s) 33, 649, 874, 877, 880, 883, 949
Bsu15I ATCGAT 1 cut(s) 875
BsuRI GGCC 4 cut(s) 113, 262, 296, 544
BsuTUI ATCGAT 1 cut(s) 875
BtgI CCRYGG 2 cut(s) 173, 297
BtgZI GCGATG 1 cut(s) 127
BtsCI GGATG 2 cut(s) 323, 467
BtsI GCAGTG 1 cut(s) 957
BtsIMutI CAGTG 2 cut(s) 949, 957
BveI ACCTGC 2 cut(s) 834, 956
Cac8I GCNNGC 2 cut(s) 380, 615
CciI TCATGA 1 cut(s) 781
CfoI GCGC 4 cut(s) 538, 956, 1033, 1083
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 91, 1059
Cfr9I CCCGGG 1 cut(s) 53
ClaI ATCGAT 1 cut(s) 875
Csp6I GTAC 3 cut(s) 160, 244, 1026
CspAI ACCGGT 1 cut(s) 130
CviAII CATG 4 cut(s) 174, 412, 782, 929
CviQI GTAC 3 cut(s) 160, 244, 1026
DdeI CTNAG 1 cut(s) 453
DinI GGCGCC 1 cut(s) 1032
DpnI GATC 8 cut(s) 171, 395, 410, 684, 723, 786, 874, 936
DpnII GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
EciI GGCGGA 1 cut(s) 609
Eco130I CCWWGG 1 cut(s) 173
Eco147I AGGCCT 2 cut(s) 262, 544
Eco31I GGTCTC 1 cut(s) 228
Eco47I GGWCC 2 cut(s) 91, 1059
Eco88I CYCGRG 1 cut(s) 53
Eco91I GGTNACC 1 cut(s) 133
EcoNI CCTNNNNNAGG 1 cut(s) 487
EcoO109I RGGNCCY 1 cut(s) 1059
EcoO65I GGTNACC 1 cut(s) 133
EcoRI GAATTC 1 cut(s) 1114
EcoT14I CCWWGG 1 cut(s) 173
EcoT22I ATGCAT 1 cut(s) 469
EgeI GGCGCC 1 cut(s) 1032
EheI GGCGCC 1 cut(s) 1032
ErhI CCWWGG 1 cut(s) 173
FaeI CATG 4 cut(s) 177, 415, 785, 932
FaqI GGGAC 2 cut(s) 895, 1045
FatI CATG 4 cut(s) 173, 411, 781, 928
FauI CCCGC 1 cut(s) 862
FbaI TGATCA 3 cut(s) 682, 721, 784
FokI GGATG 2 cut(s) 310, 454
FspBI CTAG 1 cut(s) 428
FspI TGCGCA 1 cut(s) 537
GlaI GCGC 4 cut(s) 537, 955, 1032, 1082
GsaI CCCAGC 1 cut(s) 46
HaeII RGCGCY 2 cut(s) 957, 1034
HaeIII GGCC 4 cut(s) 113, 262, 296, 544
HapII CCGG 4 cut(s) 54, 61, 131, 238
HhaI GCGC 4 cut(s) 538, 956, 1033, 1083
Hin1I GRCGYC 1 cut(s) 1031
Hin1II CATG 4 cut(s) 177, 415, 785, 932
Hin6I GCGC 4 cut(s) 536, 954, 1031, 1081
HinP1I GCGC 4 cut(s) 536, 954, 1031, 1081
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HinfI GANTC 2 cut(s) 14, 560
HpaII CCGG 4 cut(s) 54, 61, 131, 238
HphI GGTGA 1 cut(s) 127
Hpy166II GTNNAC 4 cut(s) 29, 154, 433, 842
Hpy188I TCNGA 2 cut(s) 516, 1067
Hpy188III TCNNGA 4 cut(s) 103, 461, 686, 782
Hpy8I GTNNAC 4 cut(s) 29, 154, 433, 842
Hpy99I CGWCG 2 cut(s) 199, 856
HpyAV CCTTC 1 cut(s) 286
HpyCH4III ACNGT 2 cut(s) 584, 944
HpyCH4IV ACGT 3 cut(s) 197, 278, 838
HpyCH4V TGCA 4 cut(s) 415, 467, 965, 1049
HpyF3I CTNAG 1 cut(s) 453
HpySE526I ACGT 3 cut(s) 197, 278, 838
Hsp92I GRCGYC 1 cut(s) 1031
Hsp92II CATG 4 cut(s) 177, 415, 785, 932
HspAI GCGC 4 cut(s) 536, 954, 1031, 1081
KasI GGCGCC 1 cut(s) 1030
KflI GGGWCCC 1 cut(s) 1059
Ksp22I TGATCA 3 cut(s) 682, 721, 784
Kzo9I GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 5 cut(s) 127, 178, 205, 622, 1020
Lsp1109I GCAGC 7 cut(s) 33, 649, 874, 877, 880, 883, 949
LweI GCATC 6 cut(s) 454, 476, 766, 775, 784, 856
MaeI CTAG 1 cut(s) 428
MaeII ACGT 3 cut(s) 197, 278, 838
MaeIII GTNAC 2 cut(s) 133, 821
MalI GATC 8 cut(s) 171, 395, 410, 684, 723, 786, 874, 936
MbiI CCGCTC 2 cut(s) 122, 272
MboI GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
MboII GAAGA 2 cut(s) 92, 555
MfeI CAATTG 1 cut(s) 403
MhlI GDGCHC 2 cut(s) 11, 305
MluCI AATT 5 cut(s) 403, 571, 1088, 1108, 1114
Mly113I GGCGCC 1 cut(s) 1031
MmeI TCCRAC 3 cut(s) 494, 495, 591
Mph1103I ATGCAT 1 cut(s) 469
MseI TTAA 2 cut(s) 351, 488
MslI CAYNNNNRTG 2 cut(s) 780, 1044
MspA1I CMGCKG 1 cut(s) 46
MspI CCGG 4 cut(s) 54, 61, 131, 238
MspR9I CCNGG 2 cut(s) 54, 55
MunI CAATTG 1 cut(s) 403
NarI GGCGCC 1 cut(s) 1031
NciI CCSGG 2 cut(s) 54, 55
NcoI CCATGG 1 cut(s) 173
NdeII GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
NlaIII CATG 4 cut(s) 177, 415, 785, 932
NlaIV GGNNCC 6 cut(s) 59, 65, 304, 1032, 1060, 1061
NmeAIII GCCGAG 1 cut(s) 172
NmuCI GTSAC 1 cut(s) 133
NsbI TGCGCA 1 cut(s) 537
NsiI ATGCAT 1 cut(s) 469
PagI TCATGA 1 cut(s) 781
PaqCI CACCTGC 1 cut(s) 956
PceI AGGCCT 2 cut(s) 262, 544
PciSI GCTCTTC 1 cut(s) 75
PcsI WCGNNNNNNNCGW 1 cut(s) 684
PfeI GAWTC 2 cut(s) 14, 560
PinAI ACCGGT 1 cut(s) 130
PluTI GGCGCC 1 cut(s) 1034
PpuMI RGGWCCY 1 cut(s) 1059
PsiI TTATAA 1 cut(s) 522
Psp5II RGGWCCY 1 cut(s) 1059
PspEI GGTNACC 1 cut(s) 133
PspFI CCCAGC 1 cut(s) 42
PspN4I GGNNCC 6 cut(s) 59, 65, 304, 1032, 1060, 1061
PspPI GGNCC 2 cut(s) 91, 1059
PspPPI RGGWCCY 1 cut(s) 1059
PstI CTGCAG 1 cut(s) 967
PvuII CAGCTG 1 cut(s) 46
RsaI GTAC 3 cut(s) 161, 245, 1027
RsaNI GTAC 3 cut(s) 160, 244, 1026
RseI CAYNNNNRTG 2 cut(s) 780, 1044
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 2 cut(s) 351, 488
Sau3AI GATC 8 cut(s) 169, 393, 408, 682, 721, 784, 872, 934
Sau96I GGNCC 2 cut(s) 91, 1059
ScrFI CCNGG 2 cut(s) 54, 55
SduI GDGCHC 2 cut(s) 11, 305
SfaNI GCATC 6 cut(s) 454, 476, 766, 775, 784, 856
SfcI CTRYAG 1 cut(s) 963
SfoI GGCGCC 1 cut(s) 1032
SinI GGWCC 2 cut(s) 91, 1059
SmaI CCCGGG 1 cut(s) 55
SmiMI CAYNNNNRTG 2 cut(s) 780, 1044
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
Sse9I AATT 5 cut(s) 403, 571, 1088, 1108, 1114
SseBI AGGCCT 2 cut(s) 262, 544
SsiI CCGC 8 cut(s) 114, 120, 272, 620, 626, 632, 635, 869
SspDI GGCGCC 1 cut(s) 1030
SspI AATATT 1 cut(s) 609
SspMI CTAG 1 cut(s) 428
StuI AGGCCT 2 cut(s) 262, 544
StyD4I CCNGG 2 cut(s) 52, 53
StyI CCWWGG 1 cut(s) 173
TaaI ACNGT 2 cut(s) 584, 944
TaiI ACGT 3 cut(s) 200, 281, 841
TaqI TCGA 4 cut(s) 672, 699, 875, 914
TaqII GACCGA 1 cut(s) 89
TasI AATT 5 cut(s) 403, 571, 1088, 1108, 1114
TatI WGTACW 1 cut(s) 159
TauI GCSGC 3 cut(s) 116, 275, 637
TfiI GAWTC 2 cut(s) 14, 560
Tru1I TTAA 2 cut(s) 351, 488
Tru9I TTAA 2 cut(s) 351, 488
TscAI CASTG 2 cut(s) 949, 964
TseFI GTSAC 1 cut(s) 133
TseI GCWGC 7 cut(s) 46, 637, 887, 890, 893, 896, 962
Tsp45I GTSAC 1 cut(s) 133
TspDTI ATGAA 8 cut(s) 6, 93, 837, 900, 917, 993, 1107, 1121
TspMI CCCGGG 1 cut(s) 53
TspRI CASTG 2 cut(s) 949, 964
VpaK11BI GGWCC 2 cut(s) 91, 1059
XagI CCTNNNNNAGG 1 cut(s) 487
XapI RAATTY 1 cut(s) 1114
XcmI CCANNNNNNNNNTGG 2 cut(s) 574, 1107
XmaI CCCGGG 1 cut(s) 53
XspI CTAG 1 cut(s) 428
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.