NAC transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G61110 |
| fragaria_vesca | FvH4_3g04630 |
| malus_domestica | MD05G1321800.v1.1 MD05G1321900.v1.1 MD10G1299900.v1.1 |
| prunus_persica | Prupe.4G040900_v2.0.a1 Prupe.4G040900_v2.0.a1 |
| pyrus_communis | pycom05g29620 pycom10g25260 |
| rosa_chinensis | RchiOBHm_Chr5g0007561 |
| rosa_laevigata | RLG00000031468 |
| rosa_multiflora | Rmu_ssc0000182.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00068840 |
| rosa_rugosa | Rorug04G0428600 Rorug04G0428700 |
| rosa_samantha | Rh5AG056300 Rh5BG053800 Rh5CG063600 Rh5DG052800 |
| rosa_wichuraiana | Rw5G005390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1206 |
| Acc16I | TGCGCA | 1 cut(s) | 963 |
| AccB1I | GGYRCC | 2 cut(s) | 869, 1063 |
| AccBSI | CCGCTC | 2 cut(s) | 542, 692 |
| AccI | GTMKAC | 1 cut(s) | 573 |
| AclWI | GGATC | 3 cut(s) | 584, 884, 1282 |
| AcsI | RAATTY | 1 cut(s) | 359 |
| AcvI | CACGTG | 1 cut(s) | 156 |
| AcyI | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| AdeI | CACNNNGTG | 1 cut(s) | 217 |
| AfaI | GTAC | 3 cut(s) | 13, 581, 665 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 170, 480, 621, 657, 809, 915, 919 |
| AflIII | ACRYGT | 1 cut(s) | 155 |
| AluBI | AGCT | 9 cut(s) | 352, 466, 505, 601, 677, 779, 1191, 1243, 1405 |
| AluI | AGCT | 9 cut(s) | 352, 466, 505, 601, 677, 779, 1191, 1243, 1405 |
| Alw21I | GWGCWC | 2 cut(s) | 320, 434 |
| Alw26I | GTCTC | 2 cut(s) | 97, 648 |
| AlwI | GGATC | 3 cut(s) | 584, 884, 1282 |
| Ama87I | CYCGRG | 2 cut(s) | 473, 700 |
| AoxI | GGCC | 4 cut(s) | 612, 680, 874, 968 |
| ApeKI | GCWGC | 5 cut(s) | 220, 349, 463, 1405, 1418 |
| ApoI | RAATTY | 1 cut(s) | 359 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1100, 1132, 1141, 1173 |
| AspLEI | GCGC | 4 cut(s) | 872, 964, 1066, 1470 |
| AspS9I | GGNCC | 1 cut(s) | 110 |
| AsuC2I | CCSGG | 2 cut(s) | 474, 475 |
| AsuHPI | GGTGA | 9 cut(s) | 87, 160, 218, 248, 335, 361, 449, 547, 1418 |
| AvaI | CYCGRG | 2 cut(s) | 473, 700 |
| AvaII | GGWCC | 1 cut(s) | 110 |
| AxyI | CCTNAGG | 1 cut(s) | 914 |
| BanI | GGYRCC | 2 cut(s) | 869, 1063 |
| BauI | CACGAG | 2 cut(s) | 105, 836 |
| BbrPI | CACGTG | 1 cut(s) | 156 |
| Bbv12I | GWGCWC | 2 cut(s) | 320, 434 |
| BbvI | GCAGC | 5 cut(s) | 232, 361, 475, 1392, 1430 |
| BccI | CCATC | 9 cut(s) | 304, 418, 566, 970, 1018, 1066, 1182, 1279, 1451 |
| BceAI | ACGGC | 2 cut(s) | 1101, 1237 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 824, 858 |
| BclI | TGATCA | 1 cut(s) | 985 |
| BcnI | CCSGG | 2 cut(s) | 474, 475 |
| BcoDI | GTCTC | 2 cut(s) | 97, 648 |
| BfaI | CTAG | 1 cut(s) | 678 |
| BfoI | RGCGCY | 2 cut(s) | 873, 1067 |
| BisI | GCNGC | 7 cut(s) | 221, 350, 464, 534, 693, 1406, 1419 |
| BlsI | GCNGC | 7 cut(s) | 222, 351, 465, 535, 694, 1407, 1420 |
| Bme1390I | CCNGG | 2 cut(s) | 474, 475 |
| Bme18I | GGWCC | 1 cut(s) | 110 |
| BmeT110I | CYCGRG | 2 cut(s) | 473, 700 |
| BmgT120I | GGNCC | 1 cut(s) | 110 |
| BmiI | GGNNCC | 6 cut(s) | 112, 479, 485, 724, 871, 1065 |
| BmrFI | CCNGG | 2 cut(s) | 474, 475 |
| BmrI | ACTGGG | 2 cut(s) | 937, 1482 |
| BmuI | ACTGGG | 2 cut(s) | 937, 1482 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 989, 1021 |
| BpuEI | CTTGAG | 2 cut(s) | 506, 863 |
| BpuMI | CCSGG | 2 cut(s) | 474, 475 |
| Bsa29I | ATCGAT | 1 cut(s) | 1283 |
| BsaAI | YACGTR | 1 cut(s) | 156 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1279 |
| BsaHI | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| BsaI | GGTCTC | 1 cut(s) | 648 |
| BsaJI | CCNNGG | 4 cut(s) | 473, 567, 593, 699 |
| BsaWI | WCCGGW | 6 cut(s) | 332, 446, 480, 550, 657, 719 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 170, 480, 621, 657, 809, 915, 919 |
| Bse118I | RCCGGY | 2 cut(s) | 170, 872 |
| Bse1I | ACTGG | 3 cut(s) | 932, 1042, 1488 |
| Bse21I | CCTNAGG | 1 cut(s) | 914 |
| Bse3DI | GCAATG | 1 cut(s) | 137 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1279 |
| BseCI | ATCGAT | 1 cut(s) | 1283 |
| BseDI | CCNNGG | 4 cut(s) | 473, 567, 593, 699 |
| BseGI | GGATG | 3 cut(s) | 145, 928, 1462 |
| BseJI | GATNNNNATC | 1 cut(s) | 1279 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 170, 480, 621, 657, 809, 915, 919 |
| BseMI | GCAATG | 1 cut(s) | 137 |
| BseNI | ACTGG | 3 cut(s) | 932, 1042, 1488 |
| BseRI | GAGGAG | 4 cut(s) | 226, 229, 515, 1013 |
| BseXI | GCAGC | 5 cut(s) | 232, 361, 475, 1392, 1430 |
| BsgI | GTGCAG | 1 cut(s) | 239 |
| Bsh1285I | CGRYCG | 1 cut(s) | 495 |
| BshFI | GGCC | 4 cut(s) | 614, 682, 876, 970 |
| BshNI | GGYRCC | 2 cut(s) | 869, 1063 |
| BshVI | ATCGAT | 1 cut(s) | 1283 |
| BsiEI | CGRYCG | 1 cut(s) | 495 |
| BsiHKAI | GWGCWC | 2 cut(s) | 320, 434 |
| BsiHKCI | CYCGRG | 2 cut(s) | 473, 700 |
| BslFI | GGGAC | 4 cut(s) | 38, 96, 633, 1303 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 170, 480, 621, 657, 809, 915, 919 |
| BsmAI | GTCTC | 2 cut(s) | 97, 648 |
| BsmBI | CGTCTC | 1 cut(s) | 97 |
| BsmFI | GGGAC | 4 cut(s) | 38, 96, 633, 1303 |
| BsnI | GGCC | 4 cut(s) | 614, 682, 876, 970 |
| Bso31I | GGTCTC | 1 cut(s) | 648 |
| BsoBI | CYCGRG | 2 cut(s) | 473, 700 |
| Bsp1286I | GDGCHC | 2 cut(s) | 320, 434 |
| Bsp1407I | TGTACA | 1 cut(s) | 579 |
| Bsp143I | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| Bsp19I | CCATGG | 1 cut(s) | 593 |
| BspANI | GGCC | 4 cut(s) | 614, 682, 876, 970 |
| BspDI | ATCGAT | 1 cut(s) | 1283 |
| BspLI | GGNNCC | 6 cut(s) | 112, 479, 485, 724, 871, 1065 |
| BspPI | GGATC | 3 cut(s) | 584, 884, 1282 |
| BspT107I | GGYRCC | 2 cut(s) | 869, 1063 |
| BspTNI | GGTCTC | 1 cut(s) | 648 |
| BsrBI | CCGCTC | 2 cut(s) | 542, 692 |
| BsrDI | GCAATG | 1 cut(s) | 137 |
| BsrFI | RCCGGY | 2 cut(s) | 170, 872 |
| BsrGI | TGTACA | 1 cut(s) | 579 |
| BsrI | ACTGG | 3 cut(s) | 932, 1042, 1488 |
| BssAI | RCCGGY | 2 cut(s) | 170, 872 |
| BssECI | CCNNGG | 4 cut(s) | 473, 567, 593, 699 |
| BssMI | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| BssNI | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| BssSI | CACGAG | 2 cut(s) | 105, 836 |
| BssT1I | CCWWGG | 1 cut(s) | 593 |
| Bst2BI | CACGAG | 2 cut(s) | 105, 836 |
| Bst4CI | ACNGT | 3 cut(s) | 794, 1154, 1476 |
| Bst6I | CTCTTC | 1 cut(s) | 92 |
| BstACI | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| BstAUI | TGTACA | 1 cut(s) | 579 |
| BstBAI | YACGTR | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 4 cut(s) | 874, 1145, 1215, 1245 |
| BstDEI | CTNAG | 1 cut(s) | 914 |
| BstDSI | CCRYGG | 1 cut(s) | 593 |
| BstEII | GGTNACC | 3 cut(s) | 341, 455, 553 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 913 |
| BstF5I | GGATG | 3 cut(s) | 145, 928, 1462 |
| BstH2I | RGCGCY | 2 cut(s) | 873, 1067 |
| BstHHI | GCGC | 4 cut(s) | 872, 964, 1066, 1470 |
| BstKTI | GATC | 5 cut(s) | 592, 892, 988, 1277, 1327 |
| BstMAI | GTCTC | 2 cut(s) | 97, 648 |
| BstMBI | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| BstMCI | CGRYCG | 1 cut(s) | 495 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 539, 1063, 1197, 1249, 1341, 1402 |
| BstPI | GGTNACC | 3 cut(s) | 341, 455, 553 |
| BstSCI | CCNGG | 2 cut(s) | 472, 473 |
| BstV1I | GCAGC | 5 cut(s) | 232, 361, 475, 1392, 1430 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1024 |
| Bsu15I | ATCGAT | 1 cut(s) | 1283 |
| Bsu36I | CCTNAGG | 1 cut(s) | 914 |
| BsuRI | GGCC | 4 cut(s) | 614, 682, 876, 970 |
| BsuTUI | ATCGAT | 1 cut(s) | 1283 |
| BtgI | CCRYGG | 1 cut(s) | 593 |
| BtgZI | GCGATG | 1 cut(s) | 547 |
| BtsCI | GGATG | 3 cut(s) | 145, 928, 1462 |
| BtsI | GCAGTG | 1 cut(s) | 1351 |
| BtsIMutI | CAGTG | 1 cut(s) | 1351 |
| Cac8I | GCNNGC | 4 cut(s) | 874, 1145, 1215, 1245 |
| CfoI | GCGC | 4 cut(s) | 872, 964, 1066, 1470 |
| Cfr10I | RCCGGY | 2 cut(s) | 170, 872 |
| Cfr13I | GGNCC | 1 cut(s) | 110 |
| Cfr9I | CCCGGG | 1 cut(s) | 473 |
| ClaI | ATCGAT | 1 cut(s) | 1283 |
| CseI | GACGC | 5 cut(s) | 131, 185, 757, 1226, 1236 |
| Csp6I | GTAC | 3 cut(s) | 12, 580, 664 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1318, 1353 |
| CviAII | CATG | 2 cut(s) | 594, 1183 |
| CviQI | GTAC | 3 cut(s) | 12, 580, 664 |
| DdeI | CTNAG | 1 cut(s) | 914 |
| DinI | GGCGCC | 2 cut(s) | 871, 1065 |
| DpnI | GATC | 5 cut(s) | 591, 891, 987, 1276, 1326 |
| DpnII | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| DraIII | CACNNNGTG | 1 cut(s) | 217 |
| Eam1104I | CTCTTC | 1 cut(s) | 92 |
| EarI | CTCTTC | 1 cut(s) | 92 |
| Eco130I | CCWWGG | 1 cut(s) | 593 |
| Eco147I | AGGCCT | 1 cut(s) | 970 |
| Eco31I | GGTCTC | 1 cut(s) | 648 |
| Eco47I | GGWCC | 1 cut(s) | 110 |
| Eco72I | CACGTG | 1 cut(s) | 156 |
| Eco81I | CCTNAGG | 1 cut(s) | 914 |
| Eco88I | CYCGRG | 2 cut(s) | 473, 700 |
| Eco91I | GGTNACC | 3 cut(s) | 341, 455, 553 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 913 |
| EcoO65I | GGTNACC | 3 cut(s) | 341, 455, 553 |
| EcoRI | GAATTC | 1 cut(s) | 359 |
| EcoT14I | CCWWGG | 1 cut(s) | 593 |
| EgeI | GGCGCC | 2 cut(s) | 871, 1065 |
| EheI | GGCGCC | 2 cut(s) | 871, 1065 |
| ErhI | CCWWGG | 1 cut(s) | 593 |
| Esp3I | CGTCTC | 1 cut(s) | 97 |
| FaeI | CATG | 2 cut(s) | 597, 1186 |
| FaqI | GGGAC | 4 cut(s) | 38, 96, 633, 1303 |
| FatI | CATG | 2 cut(s) | 593, 1182 |
| FauI | CCCGC | 4 cut(s) | 53, 354, 468, 1261 |
| FbaI | TGATCA | 1 cut(s) | 985 |
| FblI | GTMKAC | 1 cut(s) | 573 |
| Fnu4HI | GCNGC | 7 cut(s) | 221, 350, 464, 534, 693, 1406, 1419 |
| FokI | GGATG | 3 cut(s) | 132, 935, 1469 |
| Fsp4HI | GCNGC | 7 cut(s) | 221, 350, 464, 534, 693, 1406, 1419 |
| FspBI | CTAG | 1 cut(s) | 678 |
| FspI | TGCGCA | 1 cut(s) | 963 |
| GlaI | GCGC | 4 cut(s) | 871, 963, 1065, 1469 |
| GluI | GCNGC | 7 cut(s) | 221, 350, 464, 534, 693, 1406, 1419 |
| HaeII | RGCGCY | 2 cut(s) | 873, 1067 |
| HaeIII | GGCC | 4 cut(s) | 614, 682, 876, 970 |
| HgaI | GACGC | 5 cut(s) | 131, 185, 757, 1226, 1236 |
| HhaI | GCGC | 4 cut(s) | 872, 964, 1066, 1470 |
| Hin1I | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| Hin1II | CATG | 2 cut(s) | 597, 1186 |
| Hin6I | GCGC | 4 cut(s) | 870, 962, 1064, 1468 |
| HinP1I | GCGC | 4 cut(s) | 870, 962, 1064, 1468 |
| HincII | GTYRAC | 2 cut(s) | 574, 853 |
| HindII | GTYRAC | 2 cut(s) | 574, 853 |
| HinfI | GANTC | 7 cut(s) | 302, 323, 416, 437, 736, 813, 1004 |
| HphI | GGTGA | 9 cut(s) | 87, 160, 218, 248, 335, 361, 449, 547, 1418 |
| Hpy166II | GTNNAC | 3 cut(s) | 514, 574, 853 |
| Hpy188I | TCNGA | 5 cut(s) | 309, 423, 741, 894, 942 |
| Hpy188III | TCNNGA | 3 cut(s) | 523, 772, 887 |
| Hpy8I | GTNNAC | 3 cut(s) | 514, 574, 853 |
| Hpy99I | CGWCG | 9 cut(s) | 179, 500, 860, 1106, 1124, 1205, 1208, 1252, 1306 |
| HpyAV | CCTTC | 2 cut(s) | 80, 1133 |
| HpyCH4III | ACNGT | 3 cut(s) | 794, 1154, 1476 |
| HpyCH4IV | ACGT | 3 cut(s) | 155, 617, 1203 |
| HpyCH4V | TGCA | 3 cut(s) | 220, 835, 1147 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 539, 1063, 1197, 1249, 1341, 1402 |
| HpyF3I | CTNAG | 1 cut(s) | 914 |
| HpySE526I | ACGT | 3 cut(s) | 155, 617, 1203 |
| Hsp92I | GRCGYC | 4 cut(s) | 768, 870, 1064, 1203 |
| Hsp92II | CATG | 2 cut(s) | 597, 1186 |
| HspAI | GCGC | 4 cut(s) | 870, 962, 1064, 1468 |
| KasI | GGCGCC | 2 cut(s) | 869, 1063 |
| KroI | GCCGGC | 1 cut(s) | 872 |
| KroNI | GCCGGC | 1 cut(s) | 874 |
| Ksp22I | TGATCA | 1 cut(s) | 985 |
| Kzo9I | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| LmnI | GCTCC | 7 cut(s) | 357, 471, 502, 547, 598, 625, 674 |
| Lsp1109I | GCAGC | 5 cut(s) | 232, 361, 475, 1392, 1430 |
| MaeI | CTAG | 1 cut(s) | 678 |
| MaeII | ACGT | 3 cut(s) | 155, 617, 1203 |
| MaeIII | GTNAC | 3 cut(s) | 341, 455, 553 |
| MalI | GATC | 5 cut(s) | 591, 891, 987, 1276, 1326 |
| MbiI | CCGCTC | 2 cut(s) | 542, 692 |
| MboI | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| MboII | GAAGA | 7 cut(s) | 79, 242, 355, 538, 964, 1108, 1475 |
| MfeI | CAATTG | 1 cut(s) | 823 |
| MhlI | GDGCHC | 2 cut(s) | 320, 434 |
| MluCI | AATT | 9 cut(s) | 246, 260, 359, 373, 823, 862, 1111, 1294, 1495 |
| Mly113I | GGCGCC | 2 cut(s) | 870, 1064 |
| MlyI | GAGTC | 3 cut(s) | 317, 431, 998 |
| MmeI | TCCRAC | 3 cut(s) | 917, 920, 1188 |
| MroNI | GCCGGC | 1 cut(s) | 872 |
| MseI | TTAA | 1 cut(s) | 80 |
| MspA1I | CMGCKG | 1 cut(s) | 1405 |
| MspR9I | CCNGG | 2 cut(s) | 474, 475 |
| MunI | CAATTG | 1 cut(s) | 823 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 539, 1063, 1197, 1249, 1341, 1402 |
| NaeI | GCCGGC | 1 cut(s) | 874 |
| NarI | GGCGCC | 2 cut(s) | 870, 1064 |
| NciI | CCSGG | 2 cut(s) | 474, 475 |
| NcoI | CCATGG | 1 cut(s) | 593 |
| NdeII | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| NgoMIV | GCCGGC | 1 cut(s) | 872 |
| NlaIII | CATG | 2 cut(s) | 597, 1186 |
| NlaIV | GGNNCC | 6 cut(s) | 112, 479, 485, 724, 871, 1065 |
| NmeAIII | GCCGAG | 1 cut(s) | 592 |
| NmuCI | GTSAC | 3 cut(s) | 341, 455, 553 |
| NsbI | TGCGCA | 1 cut(s) | 963 |
| PceI | AGGCCT | 1 cut(s) | 970 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 570, 855 |
| PdiI | GCCGGC | 1 cut(s) | 874 |
| PfeI | GAWTC | 4 cut(s) | 302, 416, 736, 813 |
| PkrI | GCNGC | 7 cut(s) | 222, 351, 465, 535, 694, 1407, 1420 |
| PleI | GAGTC | 3 cut(s) | 317, 431, 998 |
| PluTI | GGCGCC | 2 cut(s) | 873, 1067 |
| PmaCI | CACGTG | 1 cut(s) | 156 |
| PmlI | CACGTG | 1 cut(s) | 156 |
| PpsI | GAGTC | 3 cut(s) | 317, 431, 998 |
| Ppu21I | YACGTR | 1 cut(s) | 156 |
| PspCI | CACGTG | 1 cut(s) | 156 |
| PspEI | GGTNACC | 3 cut(s) | 341, 455, 553 |
| PspN4I | GGNNCC | 6 cut(s) | 112, 479, 485, 724, 871, 1065 |
| PspPI | GGNCC | 1 cut(s) | 110 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 36 |
| PvuII | CAGCTG | 1 cut(s) | 1405 |
| RsaI | GTAC | 3 cut(s) | 13, 581, 665 |
| RsaNI | GTAC | 3 cut(s) | 12, 580, 664 |
| SalI | GTCGAC | 1 cut(s) | 572 |
| SaqAI | TTAA | 1 cut(s) | 80 |
| SatI | GCNGC | 7 cut(s) | 221, 350, 464, 534, 693, 1406, 1419 |
| Sau3AI | GATC | 5 cut(s) | 589, 889, 985, 1274, 1324 |
| Sau96I | GGNCC | 1 cut(s) | 110 |
| SchI | GAGTC | 3 cut(s) | 317, 431, 998 |
| ScrFI | CCNGG | 2 cut(s) | 474, 475 |
| SduI | GDGCHC | 2 cut(s) | 320, 434 |
| SfoI | GGCGCC | 2 cut(s) | 871, 1065 |
| SgrAI | CRCCGGYG | 1 cut(s) | 170 |
| SinI | GGWCC | 1 cut(s) | 110 |
| SmaI | CCCGGG | 1 cut(s) | 475 |
| SmlI | CTYRAG | 2 cut(s) | 521, 878 |
| SmoI | CTYRAG | 2 cut(s) | 521, 878 |
| Sse9I | AATT | 9 cut(s) | 246, 260, 359, 373, 823, 862, 1111, 1294, 1495 |
| SseBI | AGGCCT | 1 cut(s) | 970 |
| SspDI | GGCGCC | 2 cut(s) | 869, 1063 |
| SspMI | CTAG | 1 cut(s) | 678 |
| StuI | AGGCCT | 1 cut(s) | 970 |
| StyD4I | CCNGG | 2 cut(s) | 472, 473 |
| StyI | CCWWGG | 1 cut(s) | 593 |
| TaaI | ACNGT | 3 cut(s) | 794, 1154, 1476 |
| TaiI | ACGT | 3 cut(s) | 158, 620, 1206 |
| TaqII | GACCGA | 1 cut(s) | 509 |
| TasI | AATT | 9 cut(s) | 246, 260, 359, 373, 823, 862, 1111, 1294, 1495 |
| TatI | WGTACW | 1 cut(s) | 579 |
| TauI | GCSGC | 2 cut(s) | 536, 695 |
| TfiI | GAWTC | 4 cut(s) | 302, 416, 736, 813 |
| Tru1I | TTAA | 1 cut(s) | 80 |
| Tru9I | TTAA | 1 cut(s) | 80 |
| TscAI | CASTG | 1 cut(s) | 1351 |
| TseFI | GTSAC | 3 cut(s) | 341, 455, 553 |
| TseI | GCWGC | 5 cut(s) | 220, 349, 463, 1405, 1418 |
| Tsp45I | GTSAC | 3 cut(s) | 341, 455, 553 |
| TspGWI | ACGGA | 4 cut(s) | 335, 449, 687, 765 |
| TspMI | CCCGGG | 1 cut(s) | 473 |
| TspRI | CASTG | 1 cut(s) | 1351 |
| VpaK11BI | GGWCC | 1 cut(s) | 110 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 913 |
| XapI | RAATTY | 1 cut(s) | 359 |
| XmaI | CCCGGG | 1 cut(s) | 473 |
| XmiI | GTMKAC | 1 cut(s) | 573 |
| XspI | CTAG | 1 cut(s) | 678 |
| ZraI | GACGTC | 1 cut(s) | 1204 |